BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033736
         (112 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C8H0|AB12C_ARATH ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12
            PE=2 SV=1
          Length = 1495

 Score = 30.8 bits (68), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 30   KLCHAFSKKIKTIHCQCSDCARSGKYRKSIFKRISNFSTCSNLSLVLLWVIMIILIY--- 86
            ++ + FSK I  I    ++      +   +++ +S F+    +S + LW IM +LI    
Sbjct: 1008 RVINRFSKDIGDIDRNVANLM--NMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYA 1065

Query: 87   ---YIKSTSREV 95
               Y +STSREV
Sbjct: 1066 AYLYYQSTSREV 1077


>sp|Q2GLU9|DNAJ_ANAPZ Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ)
           GN=dnaJ PE=3 SV=1
          Length = 382

 Score = 29.6 bits (65), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 27  TILKLCHAFSKKIKTIHCQCSDCARSGKYRKSI 59
           TI +LCH  S + + +  +C  CA SG+ R  +
Sbjct: 186 TIEELCHTCSGEGEVVKNKCKRCAGSGRVRNEV 218


>sp|Q9C8H1|AB11C_ARATH ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11
            PE=2 SV=2
          Length = 1495

 Score = 29.3 bits (64), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 30   KLCHAFSKKIKTIHCQCSDCARSGKYRKSIFKRISNFSTCSNLSLVLLWVIMIILIY--- 86
            ++ + FSK I  I    ++      +   +++ +S F+    +S + LW IM +LI    
Sbjct: 1008 RVINRFSKDIGDIDRNVANLM--NMFMNQLWQLLSTFALIGIVSTISLWAIMPLLILFYA 1065

Query: 87   ---YIKSTSREV 95
               Y +STSREV
Sbjct: 1066 TYIYYQSTSREV 1077


>sp|O59830|YCUA_SCHPO Uncharacterized transcriptional regulatory protein C965.10
          OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
          GN=SPCC965.10 PE=4 SV=1
          Length = 525

 Score = 28.9 bits (63), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 14 FILTIMALPLVPYTILKLCHAFSKKIKTIHCQCSDCARSGK 54
          F+ + +  P   Y  L +C +  KK   +H QC  C ++GK
Sbjct: 7  FVASTVKKPRSRYGCL-ICRSMRKKCDEVHPQCGRCLKAGK 46


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.333    0.138    0.439 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,221,716
Number of Sequences: 539616
Number of extensions: 990335
Number of successful extensions: 4255
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4249
Number of HSP's gapped (non-prelim): 11
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)