Query 033736
Match_columns 112
No_of_seqs 101 out of 179
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 09:11:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033736.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033736hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rzhh2 f.23.10.1 (H:11-35) Ph 56.7 7.5 0.00054 17.7 3.5 18 72-89 5-22 (26)
2 d1eysh2 f.23.10.1 (H:7-43) Pho 43.4 17 0.0012 17.9 3.6 20 70-89 6-25 (37)
3 d2e74f1 f.23.25.1 (F:1-32) Pet 39.1 18 0.0013 17.0 3.2 18 70-88 12-29 (32)
4 d2iuba2 f.17.3.1 (A:286-349) M 26.3 15 0.0011 19.7 1.6 16 14-29 7-22 (64)
5 d1q90g_ f.23.26.1 (G:) PetG su 16.2 38 0.0028 15.6 1.6 17 15-31 5-21 (30)
6 d2cs4a1 d.15.1.5 (A:8-91) Ras 13.4 25 0.0018 20.3 0.6 10 99-108 58-67 (84)
7 d1n26a2 b.1.2.1 (A:94-195) Int 11.9 18 0.0013 21.8 -0.4 9 96-104 94-102 (102)
8 d2e74h1 f.23.27.1 (H:3-29) Pet 11.9 75 0.0054 14.0 2.1 8 74-81 2-9 (27)
9 d2h8aa1 f.56.1.1 (A:9-147) Mic 10.5 60 0.0044 19.6 1.8 18 70-87 121-138 (139)
10 d1iwga8 f.35.1.1 (A:513-566,A: 8.5 85 0.0062 20.2 2.1 19 5-23 54-72 (222)
No 1
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=56.66 E-value=7.5 Score=17.68 Aligned_cols=18 Identities=33% Similarity=0.932 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 033736 72 LSLVLLWVIMIILIYYIK 89 (112)
Q Consensus 72 i~lv~gW~l~~~L~y~i~ 89 (112)
+.+-..|+.++.|+|.+.
T Consensus 5 laiw~fw~ffalli~ylq 22 (26)
T d1rzhh2 5 LAIYSFWIFLAGLIYYLQ 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 445668999999999875
No 2
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=43.36 E-value=17 Score=17.92 Aligned_cols=20 Identities=20% Similarity=0.713 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 033736 70 SNLSLVLLWVIMIILIYYIK 89 (112)
Q Consensus 70 ~~i~lv~gW~l~~~L~y~i~ 89 (112)
.-+++-+.|+.++.|++.+.
T Consensus 6 Aql~ly~Fw~FFagLi~YL~ 25 (37)
T d1eysh2 6 AQITIWAFWLFFFGLIIYLR 25 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34667789999999998875
No 3
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=39.14 E-value=18 Score=16.97 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 033736 70 SNLSLVLLWVIMIILIYYI 88 (112)
Q Consensus 70 ~~i~lv~gW~l~~~L~y~i 88 (112)
..-++.+||.+-+.| -+|
T Consensus 12 sfglifvgwglgall-lki 29 (32)
T d2e74f1 12 SFGLIFVGWGLGVLL-LKI 29 (32)
T ss_dssp HHHHHHHHHHHHHHH-HHH
T ss_pred HhhHHHHHhHHHHHH-hhh
Confidence 456778899998777 443
No 4
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=26.26 E-value=15 Score=19.67 Aligned_cols=16 Identities=38% Similarity=0.600 Sum_probs=13.6
Q ss_pred HHHHHHhhhhhhhhhh
Q 033736 14 FILTIMALPLVPYTIL 29 (112)
Q Consensus 14 Fvlt~l~lvLiP~T~~ 29 (112)
-.+|+++.+.+|+|..
T Consensus 7 k~lT~it~iflP~t~i 22 (64)
T d2iuba2 7 KVLTIIATIFMPLTFI 22 (64)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3689999999999973
No 5
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=16.20 E-value=38 Score=15.64 Aligned_cols=17 Identities=47% Similarity=0.567 Sum_probs=10.9
Q ss_pred HHHHHhhhhhhhhhhhh
Q 033736 15 ILTIMALPLVPYTILKL 31 (112)
Q Consensus 15 vlt~l~lvLiP~T~~~l 31 (112)
+++-+.+=|||.|+.=+
T Consensus 5 ll~GivlGlipiTl~Gl 21 (30)
T d1q90g_ 5 LLCGIVLGLVPVTIAGL 21 (30)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhhHHHHHHHH
Confidence 34555667889887543
No 6
>d2cs4a1 d.15.1.5 (A:8-91) Ras association domain-containing protein 8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.39 E-value=25 Score=20.30 Aligned_cols=10 Identities=20% Similarity=0.780 Sum_probs=7.3
Q ss_pred chhhhhhhhc
Q 033736 99 VKILTMSAWS 108 (112)
Q Consensus 99 DPYeIL~~~~ 108 (112)
-|+++|++||
T Consensus 58 r~l~~l~~wG 67 (84)
T d2cs4a1 58 NPIISLNKWG 67 (84)
T ss_dssp CHHHHHHTTG
T ss_pred CHHHHHHHhC
Confidence 4677788776
No 7
>d1n26a2 b.1.2.1 (A:94-195) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.93 E-value=18 Score=21.77 Aligned_cols=9 Identities=11% Similarity=0.047 Sum_probs=6.9
Q ss_pred cccchhhhh
Q 033736 96 NMFVKILTM 104 (112)
Q Consensus 96 ~~fDPYeIL 104 (112)
..|+||+||
T Consensus 94 ~~F~~~~iL 102 (102)
T d1n26a2 94 QTFQGCGIL 102 (102)
T ss_dssp EEEETTTCB
T ss_pred ccccccccC
Confidence 568888886
No 8
>d2e74h1 f.23.27.1 (H:3-29) PetN subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=11.92 E-value=75 Score=14.03 Aligned_cols=8 Identities=50% Similarity=0.775 Sum_probs=4.9
Q ss_pred HHHHHHHH
Q 033736 74 LVLLWVIM 81 (112)
Q Consensus 74 lv~gW~l~ 81 (112)
+++||+.+
T Consensus 2 ~~lgwv~l 9 (27)
T d2e74h1 2 DVLGWVAL 9 (27)
T ss_dssp HHHHHHHH
T ss_pred cchhHhHH
Confidence 45677654
No 9
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.46 E-value=60 Score=19.63 Aligned_cols=18 Identities=11% Similarity=0.318 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 033736 70 SNLSLVLLWVIMIILIYY 87 (112)
Q Consensus 70 ~~i~lv~gW~l~~~L~y~ 87 (112)
|.++-.+||+..++|+++
T Consensus 121 R~~~~~~g~~~~~~m~~~ 138 (139)
T d2h8aa1 121 RGLAFFVGYGVTLSMAYR 138 (139)
T ss_dssp HHHHHHHHTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 555555566666666554
No 10
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=8.52 E-value=85 Score=20.23 Aligned_cols=19 Identities=11% Similarity=0.371 Sum_probs=13.8
Q ss_pred ccCCCchhHHHHHHHhhhh
Q 033736 5 EENSQLFPIFILTIMALPL 23 (112)
Q Consensus 5 DE~g~~fpyFvlt~l~lvL 23 (112)
||.++....|+++++.+++
T Consensus 54 ~~~~~~~~~~~la~i~i~l 72 (222)
T d1iwga8 54 DSGNQAPSLYAISLIVVFL 72 (222)
T ss_dssp CCCTTHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHH
Confidence 6777887788777766654
Done!