BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033738
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZVR1|WDR75_DANRE WD repeat-containing protein 75 OS=Danio rerio GN=wdr75 PE=2 SV=2
Length = 832
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 1 MIRGGRSYVS-SPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPA 59
++R G S ++ PP S+D + +L + ++V ++ST T + +L+GH VT + A
Sbjct: 9 VVRCGGSKINFRPPIISHDSRFVLCVSGDSVKVYSTRTEEWLHNLQGHNNQVTGI----A 64
Query: 60 STPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111
PA ++ Y + S D T+K WDF L+KT + +P++S+ +K V
Sbjct: 65 FNPANQLQVY--SCSADGTVKLWDFIDGILIKTFVIGYPLYSLYVSEKHEGV 114
>sp|Q6DFC6|WDR75_XENLA WD repeat-containing protein 75 OS=Xenopus laevis GN=wdr75 PE=2
SV=1
Length = 832
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 4 GGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
GG FS D K L+ + + + ++STST I +L+GH VT + + P +
Sbjct: 13 GGSKLDYRRSVFSADGKYLICVSGDFIKVYSTSTEECIHALQGHRKLVTGIELNPKNHLQ 72
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKT--IDVKF 97
++ SLD TIK WDF+ L+KT I KF
Sbjct: 73 L------YSCSLDGTIKLWDFTDGILIKTFLIGCKF 102
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 12 PPAFSNDVKRLLVCTSN--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSY 69
P AFS D +++L SN TV ++ TG ISSLEGHT + + A +P ++ L+
Sbjct: 941 PVAFSPD-RQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGI----AFSPDSQTLA- 994
Query: 70 CWTASLDETIKYWDFSTPE----LLKTIDVKFPIFSMVRGK 106
+AS D +++ W+ ST + LL+ D + + +GK
Sbjct: 995 --SASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGK 1033
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D + L + + T+ I++ TG + + GHT V ++ A +P +KIL +
Sbjct: 817 AFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSI----AYSPDSKILV---S 869
Query: 73 ASLDETIKYWDFSTPELLKTI 93
S D TIK WD T +KT+
Sbjct: 870 GSGDRTIKLWDCQTHICIKTL 890
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
A+S D + L +++ +V ++ TG + L GH+ V + I +P +I++ C
Sbjct: 1069 AWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIF----SPNGEIIATC-- 1122
Query: 73 ASLDETIKYWDFSTPELLKTI 93
S D+T+K WD+ + LKT+
Sbjct: 1123 -STDQTVKIWDWQQGKCLKTL 1142
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
A+S D K L+ + + T+ ++ T + I +L GHT V +V A +P + L+
Sbjct: 859 AYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSV----AFSPDGQTLA---C 911
Query: 73 ASLDETIKYWDFSTPELLK 91
SLD++++ W+ T + LK
Sbjct: 912 VSLDQSVRLWNCRTGQCLK 930
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D L ++ T+ ++ S G + +L+ HT V +V A + + L+ +
Sbjct: 775 AFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSV----AFSADGQTLA---S 827
Query: 73 ASLDETIKYWDFSTPELLKT 92
S D TIK W++ T E LKT
Sbjct: 828 GSGDRTIKIWNYHTGECLKT 847
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D K L + + TV I+ +TG GHT V++V A +P ++++ +
Sbjct: 1153 AFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSV----AFSPDGEVVA---S 1205
Query: 73 ASLDETIKYWDFSTPELLKTIDVK 96
S D+T++ W+ T E L+ + K
Sbjct: 1206 GSQDQTVRIWNVKTGECLQILRAK 1229
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AF D + L + + T+ ++ G + +L GHT V V A +P L+ +
Sbjct: 733 AFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCV----AFSPDGNTLA---S 785
Query: 73 ASLDETIKYWDFSTPELLKTI 93
++ D TIK WD S + L+T+
Sbjct: 786 SAADHTIKLWDVSQGKCLRTL 806
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 3 RGGRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPAST 61
+G S+V+S FS D K L + + TV ++ S+G + + +GHT+ V +V+ P S
Sbjct: 903 KGHNSWVNSV-GFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSL 961
Query: 62 PATKILSYCWTASLDETIKYWDFSTPELL 90
+ S D+T++ WD S+ E L
Sbjct: 962 MLA-------SGSSDQTVRLWDISSGECL 983
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
TV +++ S+G + +L GH V +V A + IL+ + S DETIK WD T
Sbjct: 1431 DQTVRLWNISSGECLYTLHGHINSVRSV----AFSSDGLILA---SGSDDETIKLWDVKT 1483
Query: 87 PELLKTI 93
E +KT+
Sbjct: 1484 GECIKTL 1490
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
TV ++S S+G + +L+GH V +++ P T +L+ + S D+T++ W+ S+
Sbjct: 1389 DQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGT----LLA---SGSDDQTVRLWNISS 1441
Query: 87 PELLKTI 93
E L T+
Sbjct: 1442 GECLYTL 1448
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
TV ++ S+G + +L+GHT+ V +V+ +P +L+ + D+ ++ WD S+
Sbjct: 1053 DQTVRLWDISSGNCLYTLQGHTSCVRSVVF----SPDGAMLA---SGGDDQIVRLWDISS 1105
Query: 87 PELLKTID-----VKFPIFS 101
L T+ V+F +FS
Sbjct: 1106 GNCLYTLQGYTSWVRFLVFS 1125
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D K S V + +TG ++ + +GH + V +V + K+L+ +
Sbjct: 871 AFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSV----GFSQDGKMLA---S 923
Query: 73 ASLDETIKYWDFSTPELLKT 92
S D+T++ WD S+ + LKT
Sbjct: 924 GSDDQTVRLWDISSGQCLKT 943
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 1 MIRGGRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPA 59
+++G S+V+S F+ D L +S+ TV ++ ++ + + +GHT+ V +V+ P
Sbjct: 1195 ILQGHTSWVNSV-VFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPD 1253
Query: 60 STPATKILSYCWTASLDETIKYWDFSTPELLKT 92
S + S D+T++ WD S+ + L T
Sbjct: 1254 G-------SMLASGSSDKTVRLWDISSSKCLHT 1279
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 3 RGGRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPAST 61
+G S+VSS FS D L + + TV ++S S+G + + GHT V +VI +
Sbjct: 1323 QGHTSWVSSV-TFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIF----S 1377
Query: 62 PATKILSYCWTASLDETIKYWDFSTPELLKTI 93
P IL+ + S D+T++ W S+ + L T+
Sbjct: 1378 PDGAILA---SGSGDQTVRLWSISSGKCLYTL 1406
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 3 RGGRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPAST 61
+G S+V+S F+ D L +S+ TV ++ S+ + + +GHT V +V A
Sbjct: 1239 QGHTSWVNSV-VFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSV----AFN 1293
Query: 62 PATKILSYCWTASLDETIKYWDFSTPELLKT 92
P +L+ + S D+T++ W+ S+ + L T
Sbjct: 1294 PDGSMLA---SGSGDQTVRLWEISSSKCLHT 1321
>sp|O94620|CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf17 PE=1 SV=1
Length = 340
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 21 RLLVCTSNTVSIFS--TSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET 78
R++ C+S+ + S +G +I +GH V + V+ +++L+ + S D T
Sbjct: 106 RVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKV---GSELLT---SVSDDCT 159
Query: 79 IKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112
+K WD + + +KTI+ K+P+ ++ ++G VF
Sbjct: 160 MKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVF 193
>sp|Q7S8R5|MDV1_NEUCR Mitochondrial division protein 1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mdv-1 PE=3 SV=1
Length = 645
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 1 MIRGGRSYVSSPPAFSNDVKRLLVCTS---NTVSIFSTSTGLQISSLEGHTAPVTTVIVV 57
MIR R++ + A D L+ ++ ++V ++ + G I +LEGHTA V T+ +
Sbjct: 299 MIRSMRAHQDNITALDFDAPFGLMVSAAMDDSVRVWDLNAGRCIGTLEGHTASVRTLQIE 358
Query: 58 PASTPATKILSYCWTASLDETIKYWDFS 85
++ T S+D TIK WD S
Sbjct: 359 D---------NFLATGSMDATIKLWDLS 377
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V ++ +G SL GHT PVT + + T SLD +I+ WD T +
Sbjct: 513 VRLWDLRSGQVHRSLVGHTGPVTCLQFDDV---------HLVTGSLDRSIRIWDLRTGSI 563
Query: 90 LKTIDVKFPIFSMV 103
PI SM+
Sbjct: 564 FDAYAYDHPITSMM 577
>sp|Q6BSL7|EIF3I_DEBHA Eukaryotic translation initiation factor 3 subunit I
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIF34 PE=3 SV=1
Length = 349
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 24 VCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83
V +T SI+ +S G ++ +LEGH + ++ V A IL C T S D TIK W
Sbjct: 28 VAKDSTASIWYSSNGERLGTLEGHIGTIWSIDV-----DADTIL--CATGSADLTIKLWK 80
Query: 84 FSTPELLKTIDVKFPI 99
T E +++ ++ P+
Sbjct: 81 IETGECVQSWEMPTPV 96
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 3 RGGRSYVSSPPA----FSNDVKRLLVC-TSNTVSIFSTSTGLQISSLEGHTAPVTTVIVV 57
+G + SS P +SND ++ N + ++ ++G Q + H+AP+ + V
Sbjct: 72 QGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASG-QTQQIGMHSAPIKVLRFV 130
Query: 58 PASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIFSM 102
T+ + T S D+TIKYWD P+ + T+ + ++SM
Sbjct: 131 QCGPSNTECIV---TGSWDKTIKYWDMRQPQPVSTVMMPERVYSM 172
>sp|Q25306|GBLP_LEIMA Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania major PE=2 SV=1
Length = 312
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 IRGGRSYVSSPPAFSNDVKRLLVCT---SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVP 58
+R G S FS ++ +V + NT+ +++ + G +L+GH+ V+TV V P
Sbjct: 145 LRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSP 204
Query: 59 ASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPI 99
S C + D WD ST E L I+V+ PI
Sbjct: 205 DG-------SLCASGGKDGAALLWDLSTGEQLFKINVESPI 238
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 38 GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91
GL LEGHT V+ V + A+ Y TAS D +I+ WD + +
Sbjct: 55 GLPNHRLEGHTGFVSCVSLAHAT-------DYALTASWDRSIRMWDLRNGQCQR 101
>sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania infantum GN=LinJ28.2880 PE=2 SV=1
Length = 312
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 IRGGRSYVSSPPAFSNDVKRLLVCT---SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVP 58
+R G S FS ++ +V + NT+ +++ + G +L+GH+ V+TV V P
Sbjct: 145 LRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSP 204
Query: 59 ASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPI 99
S C + D WD ST E L I+V+ PI
Sbjct: 205 DG-------SLCASGGKDGAALLWDLSTGEQLFKINVESPI 238
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 38 GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91
GL LEGHT V+ V + A+ Y TAS D +I+ WD + +
Sbjct: 55 GLPSHRLEGHTGFVSCVSLAHAT-------DYALTASWDRSIRMWDLRNGQCQR 101
>sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania chagasi PE=2 SV=1
Length = 312
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 IRGGRSYVSSPPAFSNDVKRLLVCT---SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVP 58
+R G S FS ++ +V + NT+ +++ + G +L+GH+ V+TV V P
Sbjct: 145 LRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSP 204
Query: 59 ASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPI 99
S C + D WD ST E L I+V+ PI
Sbjct: 205 DG-------SLCASGGKDGAALLWDLSTGEQLFKINVESPI 238
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 38 GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91
GL LEGHT V+ V + A+ Y TAS D +I+ WD + +
Sbjct: 55 GLPSHRLEGHTGFVSCVSLAHAT-------DYALTASWDRSIRMWDLRNGQCQR 101
>sp|Q2H139|MDV1_CHAGB Mitochondrial division protein 1 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=MDV1 PE=3 SV=2
Length = 657
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 1 MIRGGRSYVSSPPAFSNDVKRLLVCTS---NTVSIFSTSTGLQISSLEGHTAPVTTVIVV 57
MIR R++ S A D L+ T+ + V ++ + G I LEGHTA V T+ V
Sbjct: 308 MIRSMRAHHDSITALDFDAPFGLMVTAAMDDAVRVWDLNAGRCIGVLEGHTASVRTLQVE 367
Query: 58 PASTPATKILSYCWTASLDETIKYWDFS 85
++ T S+D TI+ WD S
Sbjct: 368 D---------NFLATGSMDATIRLWDLS 386
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V ++ +G SL GHT PVT + + T SLD +I+ WD T
Sbjct: 525 VRLWDLRSGQVSRSLVGHTGPVTCLQFDDV---------HLVTGSLDRSIRIWDLRTGSS 575
Query: 90 LKTIDVKFPIFSMV 103
+ PI SM+
Sbjct: 576 TTPLRTTTPITSMM 589
>sp|P16371|GROU_DROME Protein groucho OS=Drosophila melanogaster GN=gro PE=1 SV=3
Length = 730
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
A S D K C S+ ++++ + + +GHT + + + P S WT
Sbjct: 541 AISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDG-------SRLWT 593
Query: 73 ASLDETIKYWDFSTPELLKTIDVKFPIFSM 102
LD T++ WD L+ D IFS+
Sbjct: 594 GGLDNTVRSWDLREGRQLQQHDFSSQIFSL 623
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 2 IRGGRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPAS 60
+ G +V S AFS D +R+ +S+ T+ I+ T++G +LEGH V +V P
Sbjct: 1173 LEGHGGWVQSV-AFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDG 1231
Query: 61 TPATKILSYCWTASLDETIKYWDFSTPELLKTIDV 95
+ S D TIK WD ++ +T++V
Sbjct: 1232 QRVA-------SGSSDNTIKIWDTASGTCTQTLNV 1259
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D +R+ + + T+ I+ T++G +LEGH V +V P +
Sbjct: 848 AFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVA-------S 900
Query: 73 ASLDETIKYWDFSTPELLKTID 94
S D+TIK WD ++ +T++
Sbjct: 901 GSDDKTIKIWDAASGTCTQTLE 922
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D +R+ + + T+ I+ T++G +LEGH V +V P +
Sbjct: 974 AFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-------S 1026
Query: 73 ASLDETIKYWDFSTPELLKTID 94
S D+TIK WD ++ +T++
Sbjct: 1027 GSDDKTIKIWDTASGTCTQTLE 1048
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D +R+ + + T+ I+ ++G +LEGH + V +V P +
Sbjct: 932 AFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-------S 984
Query: 73 ASLDETIKYWDFSTPELLKTID 94
S D+TIK WD ++ +T++
Sbjct: 985 GSGDKTIKIWDTASGTCTQTLE 1006
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 14 AFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
AFS D +R+ + T+ I+ ++G +LEGH V +V P +
Sbjct: 1100 AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-------S 1152
Query: 73 ASLDETIKYWDFSTPELLKTID 94
S+D TIK WD ++ +T++
Sbjct: 1153 GSIDGTIKIWDAASGTCTQTLE 1174
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 15 FSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS D +R+ + + T+ I+ +G +LEGH V +V P +
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-------SG 1111
Query: 74 SLDETIKYWDFSTPELLKTID 94
S+D TIK WD ++ +T++
Sbjct: 1112 SIDGTIKIWDAASGTCTQTLE 1132
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
TV+++ +TG ++++L GH+ V+ V A P + L+ TA+ D ++K WD T
Sbjct: 63 TVALWDAATGARVNTLAGHSCGVSDV----AWNPNGRYLA---TAADDHSLKLWDAETGA 115
Query: 89 LLKTI 93
L+T+
Sbjct: 116 CLRTL 120
>sp|A8PTE4|MDV1_MALGO Mitochondrial division protein 1 OS=Malassezia globosa (strain ATCC
MYA-4612 / CBS 7966) GN=MDV1 PE=3 SV=1
Length = 674
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V ++ TG +L GHTAP+T + T ++S SLD+TI+ WD + +
Sbjct: 549 VRLWDLRTGQAHRTLLGHTAPITCL-----QFDDTHLIS----GSLDKTIRVWDLRSGHV 599
Query: 90 LKTIDVKFPIFSM 102
L+T+ +P+ ++
Sbjct: 600 LETLHYDYPVTAL 612
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTP 87
+TV ++ STG + L GHT V + V C + SLD T++ WD
Sbjct: 353 DTVRVWDLSTGEDVGRLRGHTDTVKCLQVED---------ELCVSGSLDSTLRVWDLRRV 403
Query: 88 ELLKT 92
+ +T
Sbjct: 404 DAFET 408
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTP 87
N V ++ +TG ++ L+GHT VT+V V P S C ++ D + WD +
Sbjct: 176 NLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDG-------SLCASSDKDGVARLWDLTKG 228
Query: 88 ELLKTIDVKFPI 99
E L + PI
Sbjct: 229 EALSEMAAGAPI 240
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTP 87
N V ++ +TG ++ L+GHT VT+V V P S C ++ D + WD +
Sbjct: 176 NLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDG-------SLCASSDKDGVARLWDLTKG 228
Query: 88 ELLKTIDVKFPI 99
E L + PI
Sbjct: 229 EALSEMAAGAPI 240
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 15 FSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS D K L + NTV +++ S G +L+GHT V V + +P KI++ +A
Sbjct: 1454 FSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWV----SFSPDGKIIA---SA 1506
Query: 74 SLDETIKYWDFSTPELLKTI 93
S D+TI+ WD + L+K++
Sbjct: 1507 SADKTIRLWDSFSGNLIKSL 1526
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 15 FSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS D K L +S+ ++ ++ T++G + +L GH+A V TV P
Sbjct: 1163 FSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIA-------AG 1215
Query: 74 SLDETIKYWDFSTPELLKTID 94
S D+T+K W +LLKT++
Sbjct: 1216 SEDKTVKLWHRQDGKLLKTLN 1236
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
TV ++ G + +L GH V ++ + +P K L+ +AS D+TIK W + +
Sbjct: 1220 TVKLWHRQDGKLLKTLNGHQDWVNSL----SFSPDGKTLA---SASADKTIKLWRIADGK 1272
Query: 89 LLKTI 93
L+KT+
Sbjct: 1273 LVKTL 1277
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 15 FSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS+D K + + NT+ +++ G+++ + GH+ V V +P S I++ +A
Sbjct: 1289 FSSDGKAIASASRDNTIKLWNRH-GIELETFTGHSGGVYAVNFLPDSN----IIA---SA 1340
Query: 74 SLDETIKYW 82
SLD TI+ W
Sbjct: 1341 SLDNTIRLW 1349
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 5 GRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
G + S A+S+D RL+ + + T+ ++ +G + +L+GH+ V P P+
Sbjct: 81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNP---PS 137
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKTI 93
I+S S DET+K W+ T + LKT+
Sbjct: 138 NLIIS----GSFDETVKIWEVKTGKCLKTL 163
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 40/113 (35%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTV-------------------IVVPASTPATKIL-- 67
TV I+ TG + +L H+ PV+ V I AS K L
Sbjct: 148 TVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVD 207
Query: 68 ---------------SYCWTASLDETIKYWDFSTPELLKTI----DVKFPIFS 101
Y TA+LD T+K WD+S LKT + K+ IF+
Sbjct: 208 DDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFA 260
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+L GH +PVT VI P + S +AS D TIK WD+ T + +T+
Sbjct: 103 ALSGHRSPVTRVIFHP-------VFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ TG +L+GHT V + + K+L+ C S D TIK WDF E
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDI----SFDHTGKLLASC---SADMTIKLWDFQGFE 183
Query: 89 LLKTI 93
++T+
Sbjct: 184 CIRTM 188
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
+F + K L C+++ T+ ++ I ++ GH V++V ++P + +
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-------DHIVS 209
Query: 73 ASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
AS D+TIK W+ +T +KT MVR
Sbjct: 210 ASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ S G+ + +L GH V ++V P + + + D+T++ WD+
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGG-------KFILSCADDKTLRIWDYKNKR 371
Query: 89 LLKTI 93
+KT+
Sbjct: 372 CMKTL 376
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 5 GRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
G + S A+S+D RL+ + + T+ ++ +G + +L+GH+ V P P+
Sbjct: 81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNP---PS 137
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKTI 93
I+S S DET+K W+ T + LKT+
Sbjct: 138 NLIIS----GSFDETVKIWEVKTGKCLKTL 163
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 40/113 (35%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTV-------------------IVVPASTPATKIL-- 67
TV I+ TG + +L H+ PV+ V I AS K L
Sbjct: 148 TVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVD 207
Query: 68 ---------------SYCWTASLDETIKYWDFSTPELLKTI----DVKFPIFS 101
Y TA+LD T+K WD+S LKT + K+ IF+
Sbjct: 208 DDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFA 260
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 15/71 (21%)
Query: 41 ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIF 100
I +LEGH PV TV++ Y ++ S D+TIK WD LKT++ K+ +
Sbjct: 535 IFTLEGHDKPVHTVLLNDK---------YLFSGSSDKTIKVWD------LKTLECKYTLE 579
Query: 101 SMVRGKKGFAV 111
S R K +
Sbjct: 580 SHARAVKTLCI 590
>sp|Q9HAD4|WDR41_HUMAN WD repeat-containing protein 41 OS=Homo sapiens GN=WDR41 PE=2 SV=3
Length = 459
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V +++ TG ++ L GHT +T +I P+ + TAS D T+ WD T
Sbjct: 66 VVVWNAQTGEKLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQ 125
Query: 90 LKTI 93
++ I
Sbjct: 126 VQRI 129
>sp|Q8IWA0|WDR75_HUMAN WD repeat-containing protein 75 OS=Homo sapiens GN=WDR75 PE=1
SV=1
Length = 830
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 4 GGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
GG FS D K + + + V ++ST T + L GH VT + + P +
Sbjct: 13 GGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNNHLQ 72
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKTIDV 95
++ SLD TIK WD+ L+KT V
Sbjct: 73 L------YSCSLDGTIKLWDYIDGILIKTFIV 98
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
SL GH A +T VI P I +AS D TIK WDF T E +T+
Sbjct: 103 SLTGHRASITRVIFHP-------IFGLMVSASEDATIKIWDFETGEYERTL 146
Score = 35.8 bits (81), Expect = 0.080, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVPASTPATKILSYCW 71
AF K L+ C+++ ++ ++ + + ++ GH V++V VPA Y
Sbjct: 157 AFDAQGKLLVSCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAG-------DYVL 209
Query: 72 TASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
+AS D TIK W+ +T +KT MVR
Sbjct: 210 SASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ I+ S G + +L GH V + P Y +AS D+TI+ WD
Sbjct: 320 TIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGG-------KYLVSASDDKTIRVWDLRNKR 372
Query: 89 LLKTI 93
+KT+
Sbjct: 373 CMKTL 377
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 22 LLVCTSN--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79
L+V S T+ I+ TG +L+GHT V V A K+L C S D +I
Sbjct: 122 LMVSASEDATIKIWDFETGEYERTLKGHTDSVQDV----AFDAQGKLLVSC---SADLSI 174
Query: 80 KYWDFSTP-ELLKTI 93
K WDF E +KT+
Sbjct: 175 KLWDFQQSYECVKTM 189
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+L GH +PVT VI P + S TAS D TIK WD+ T + +T+
Sbjct: 103 ALSGHRSPVTRVIFHP-------VFSVMVTASEDATIKVWDYETGDFERTL 146
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
+F + K L C+++ T+ ++ I ++ GH V++V ++P I+S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN---GDHIVS---- 209
Query: 73 ASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
AS D+TIK W+ T +KT MVR
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ TG +L+GHT V + + + K+L+ C S D TIK WDF E
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDI----SFDHSGKLLASC---SADMTIKLWDFQGFE 183
Query: 89 LLKTI 93
++T+
Sbjct: 184 CIRTM 188
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
T+ ++ S G+ + +L GH V V P K + C + D+TI+ WD+
Sbjct: 317 DKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGG----KFILSC---ADDKTIRIWDYKN 369
Query: 87 PELLKTIDV 95
+KT++
Sbjct: 370 KRCMKTLNA 378
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+L GH +PVT VI P + S TAS D TIK WD+ T + +T+
Sbjct: 103 ALSGHRSPVTRVIFHP-------VFSVMVTASEDATIKVWDYETGDFERTL 146
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ TG +L+GHT V + + + K+L+ C S D TIK WDF E
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDI----SFDHSGKLLASC---SADMTIKLWDFQGFE 183
Query: 89 LLKTI 93
L+T+
Sbjct: 184 CLRTM 188
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
+F + K L C+++ T+ ++ + ++ GH V++V ++P I+S
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPN---GDHIVS---- 209
Query: 73 ASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
AS D+TIK W+ T +KT MVR
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
T+ ++ S G+ + +L GH V V P K + C + D+TI+ WD+
Sbjct: 317 DKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGG----KFILSC---ADDKTIRIWDYKN 369
Query: 87 PELLKTIDV 95
+KT++
Sbjct: 370 KRCMKTLNA 378
>sp|Q756D0|YTM1_ASHGO Ribosome biogenesis protein YTM1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YTM1
PE=3 SV=2
Length = 445
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 41 ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIF 100
+S LE H APV VI AS +T ++ S D TIK WD T + T + +
Sbjct: 265 LSLLESHKAPVEQVIF--ASNDST----VAYSVSQDHTIKTWDLVTSRCVDTKSTSYSLL 318
Query: 101 SMVR 104
SMV
Sbjct: 319 SMVE 322
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 11 SPPAFSNDVKRLLVCTSN---TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKIL 67
S A+S D K L+C+++ T+ I+ +G + +L+GH V V P S
Sbjct: 92 SDIAWSQDSK--LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV--- 146
Query: 68 SYCWTASLDETIKYWDFSTPELLKTI 93
+ S DE ++ WD +T E K I
Sbjct: 147 ----SGSFDENVRIWDVNTGECTKMI 168
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 11 SPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSY 69
S FS D K L +++ T+ I+ G +LEGH ++ + A + +K++
Sbjct: 50 SSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI----AWSQDSKLI-- 103
Query: 70 CWTASLDETIKYWDFSTPELLKTI 93
C +AS D+TIK WD + +++KT+
Sbjct: 104 C-SASDDKTIKIWDVESGKMVKTL 126
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 14 AFSNDVKRLLVCTSN--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCW 71
A+S+D RLLV S+ T+ ++ STG + +L+GH+ V P S
Sbjct: 121 AWSSD-SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIV------- 172
Query: 72 TASLDETIKYWDFSTPELLKTI 93
+ S DE+++ WD T + LKT+
Sbjct: 173 SGSFDESVRIWDVRTGKCLKTL 194
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 32 IFSTSTGLQISSL-EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90
I+ T++G + +L + PV+ V P Y A+LD T+K WD+S + L
Sbjct: 224 IWDTASGQCLKTLIDDDNPPVSFVKFSPNG-------KYILAATLDNTLKLWDYSKGKCL 276
Query: 91 KTI----DVKFPIFS 101
KT + K+ IF+
Sbjct: 277 KTYTGHKNEKYCIFA 291
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 42 SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
S+L GH AP+T V+ P + S +AS D +IK WD+ T + +TI
Sbjct: 100 SALLGHRAPITRVLFHP-------VYSVVVSASEDASIKVWDYETGDFERTI 144
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ STGL + +L GH V V P Y +AS D+T++ W+ +
Sbjct: 320 TIKVWDVSTGLALFTLVGHDNWVRGVKFHPGG-------KYLLSASDDKTLRVWELAHQR 372
Query: 89 LLKTID 94
KT+D
Sbjct: 373 CCKTLD 378
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
++ ++ TG +++GHT V + A + L+ C S D TIK WDF + E
Sbjct: 129 SIKVWDYETGDFERTIKGHTDSVQDI----AFDHTGQFLASC---SADMTIKLWDFKSYE 181
Query: 89 LLKTI 93
L+T+
Sbjct: 182 CLRTM 186
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 5 GRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
G S S A+S+D RL+ + + T+ ++ +G + +L+GH+ V P P+
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP---PS 135
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKTI 93
I+S S DE++K W+ T + LKT+
Sbjct: 136 NLIVS----GSFDESVKIWEVKTGKCLKTL 161
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 69 YCWTASLDETIKYWDFSTPELLKTI----DVKFPIFS--MVRGKK 107
Y TA+LD T+K WD+S LKT + K+ +F+ V G+K
Sbjct: 222 YILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK 266
>sp|B2B766|LIS12_PODAN Nuclear distribution protein PAC1-2 OS=Podospora anserina (strain S
/ ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=PAC1-2 PE=3
SV=1
Length = 468
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 41 ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTID 94
I +L GH V++V VPA+ A + +AS D T+K WD +T +KTI+
Sbjct: 200 IRTLHGHDHIVSSVRFVPANGTAGAGGNLLVSASKDNTLKLWDVTTGYCVKTIE 253
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+LEGH P+T+V P + S +AS D TIK WD+ EL +T+
Sbjct: 115 TLEGHRLPITSVAFHP-------VFSSLASASEDNTIKIWDWELGELERTL 158
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+L GH A VT V+ P + S +AS D TIK WDF T E +T+
Sbjct: 101 ALAGHRATVTRVVFHP-------VFSMMASASEDATIKIWDFETGEYERTL 144
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVPASTPATKILSYCW 71
AF + K L C+S+ ++ ++ + + ++ GH V++V VPA Y
Sbjct: 155 AFDSHGKLLASCSSDLSIKLWDFQQTFECVKTMHGHDHNVSSVSFVPAG-------DYLL 207
Query: 72 TASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
+AS D+TIK W+ +T +KT MVR
Sbjct: 208 SASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 240
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ ++GL + +L GH V ++ P Y +AS D+T++ WD
Sbjct: 318 TIRVWDVNSGLCLFTLVGHDNWVRGIVFHPGG-------KYMLSASDDKTLRIWDLRNKR 370
Query: 89 LLKTI 93
+KT+
Sbjct: 371 CMKTL 375
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
SL GH +P+T V+ P + S +AS D TIK WD+ T + +T+
Sbjct: 101 SLSGHRSPITRVLFHP-------VYSVMVSASEDATIKIWDYETGDFERTL 144
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ I+ TG +L+GHT V V + K+L+ C S D TIK WDF T E
Sbjct: 129 TIKIWDYETGDFERTLKGHTDAVQDV----SFDQQGKLLASC---SADMTIKLWDFQTFE 181
Query: 89 LLKTI 93
+KT+
Sbjct: 182 NIKTM 186
Score = 35.4 bits (80), Expect = 0.092, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ STG+ I +L GH V V+ P Y +AS D+TI+ WD+
Sbjct: 315 TIKMWDISTGVCIMTLVGHDNWVRGVVWHPGG-------KYIISASDDKTIRVWDYKNKR 367
Query: 89 LLKTID 94
KT++
Sbjct: 368 CQKTLE 373
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72
+F K L C+++ T+ ++ T I ++ GH V++V +P + +
Sbjct: 155 SFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNG-------DFLIS 207
Query: 73 ASLDETIKYWDFSTPELLKT 92
AS D+TIK W+ +T +KT
Sbjct: 208 ASRDKTIKMWELATGYCVKT 227
>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
Length = 775
Score = 36.6 bits (83), Expect = 0.041, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
T+ ++ STG+ + L GH V +V + P+ C +A D I+ W+ + E
Sbjct: 598 TLRVWKASTGVCLHVLRGHVGRVYSVTINPSR-------QQCISAGTDAKIRIWNLESGE 650
Query: 89 LLKTI 93
LL+T+
Sbjct: 651 LLQTL 655
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 17 NDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76
+D K ++ S ++I+ T TG+ I SLE H V T V + T S D
Sbjct: 415 DDDKIIVSTCSPRINIYDTKTGVLIRSLEEHEGDVWTFEYVGDTLV---------TGSTD 465
Query: 77 ETIKYWDFSTPE 88
T++ WD T E
Sbjct: 466 RTVRVWDLRTGE 477
>sp|Q3UDP0|WDR41_MOUSE WD repeat-containing protein 41 OS=Mus musculus GN=Wdr41 PE=2 SV=1
Length = 460
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86
+ +++ TG ++ L GHT +T VI P TAS D T+ WD T
Sbjct: 66 IVVWNAQTGEKLLELRGHTQKITAVIAFPPLDSCEASSQLLLTASADRTVGVWDCDT 122
>sp|P0CS32|EIF3I_CRYNJ Eukaryotic translation initiation factor 3 subunit I
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIF34 PE=3 SV=1
Length = 341
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85
S ++ + TG ++ ++E H+A ++ + + P T Y TAS D+T + WD
Sbjct: 174 SGKIAKYDVKTGEEVQAVEDEHSALISDIQLSPDGT-------YFITASKDKTARLWDIE 226
Query: 86 TPELLKTIDVKFPIFSMV 103
T E++K + P+ S V
Sbjct: 227 TLEVMKVYTTETPVNSAV 244
>sp|P0CS33|EIF3I_CRYNB Eukaryotic translation initiation factor 3 subunit I
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIF34 PE=3 SV=1
Length = 341
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 27 SNTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85
S ++ + TG ++ ++E H+A ++ + + P T Y TAS D+T + WD
Sbjct: 174 SGKIAKYDVKTGEEVQAVEDEHSALISDIQLSPDGT-------YFITASKDKTARLWDIE 226
Query: 86 TPELLKTIDVKFPIFSMV 103
T E++K + P+ S V
Sbjct: 227 TLEVMKVYTTETPVNSAV 244
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 26 TSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85
T TV+++ + TG ++ L+GHT+ V + PA + T S D T+K WD
Sbjct: 130 TDKTVAVWDSETGERVKRLKGHTSFVNSCY------PARRGPQLVCTGSDDGTVKLWDIR 183
Query: 86 TPELLKTIDVKFPIFSM 102
++T + + ++
Sbjct: 184 KKAAVQTFQNTYQVLAV 200
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 5 GRSYVSSPPAFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPA 63
G S S A+S+D RL+ + + T+ ++ +G + +L+GH+ V P P+
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNP---PS 135
Query: 64 TKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIFSMVR 104
I+S S DE++K W+ T + LKT+ S V
Sbjct: 136 NLIVS----GSFDESVKIWEVKTGKCLKTLSAHSDPISAVH 172
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 69 YCWTASLDETIKYWDFSTPELLKTI----DVKFPIFS--MVRGKK 107
Y TA+LD T+K WD+S LKT + K+ IF+ V G+K
Sbjct: 222 YILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRK 266
>sp|Q2GTM8|EIF3I_CHAGB Eukaryotic translation initiation factor 3 subunit I
OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 /
DSM 1962 / NBRC 6347 / NRRL 1970) GN=TIF34 PE=3 SV=1
Length = 341
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 24 VCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83
V + ++ G ++ + GH + T+ V P ST IL+ + S D TI+ WD
Sbjct: 28 VSKDQQICVWFAHNGERLGTYRGHQGAIWTIDVDPTST----ILA---SGSADNTIRLWD 80
Query: 84 FSTPELLKTIDVKFP 98
T + LKT D FP
Sbjct: 81 IKTGKCLKTWD--FP 93
>sp|Q7RXH4|EIF3I_NEUCR Eukaryotic translation initiation factor 3 subunit I
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tif-34 PE=3 SV=1
Length = 346
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 24 VCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83
V + ++ G ++ + GH + T+ V P ST IL+ + S D TI+ W+
Sbjct: 28 VSKDQQICVWFAHNGERLGTYHGHQGAIWTIDVDPTST----ILA---SGSADNTIRLWE 80
Query: 84 FSTPELLKTIDVKFP 98
T LLKT D FP
Sbjct: 81 IKTGRLLKTWD--FP 93
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 26 TSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85
T TV+++ + TG ++ L+GHT+ V + PA + T S D T+K WD
Sbjct: 130 TDKTVAVWDSETGERVKRLKGHTS------FVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 86 TPELLKTIDVKFPIFSM 102
++T + + ++
Sbjct: 184 KKAAIQTFQNTYQVLAV 200
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 36.6 bits (83), Expect = 0.053, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88
+V ++ +G I +L+GHT V + A TP L+ C S D +IK WDF T
Sbjct: 152 SVKVWDHESGEYIRTLKGHTNTVNGL----AFTPTGSHLASC---STDLSIKLWDFQTYA 204
Query: 89 LLKTI 93
+KT+
Sbjct: 205 CIKTL 209
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 14 AFSNDVKRLLVCTSN-TVSIFSTSTGLQISSLEGHTAPVTTVIVVP------ASTPATKI 66
AF+ L C+++ ++ ++ T I +L GH +++V+ +P +T ++
Sbjct: 178 AFTPTGSHLASCSTDLSIKLWDFQTYACIKTLRGHDHTISSVVFLPFGGDLLTTTKCKRL 237
Query: 67 LSYCWTASLDETIKYWDFST 86
LS AS D T+K WD T
Sbjct: 238 LS----ASRDCTVKVWDLET 253
>sp|A8XZJ9|LIS1_CAEBR Lissencephaly-1 homolog OS=Caenorhabditis briggsae GN=lis-1 PE=3
SV=2
Length = 390
Score = 36.2 bits (82), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 40 QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93
+ L GH PVT VI P T I++ C S D TIK WD+ T +L KT+
Sbjct: 98 ETQKLIGHRLPVTRVIFHPLWT----IMASC---SEDATIKVWDYETGQLEKTL 144
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 20 KRLLVCTSN-TVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE 77
K+L+ C+++ T+ ++ + SL+GH V++V +P + +AS D
Sbjct: 161 KQLVSCSTDLTIKLWDFGQSYDCLKSLKGHEHTVSSVTFLPTG-------DFVLSASRDH 213
Query: 78 TIKYWDFST 86
TIK WD ST
Sbjct: 214 TIKQWDIST 222
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84
T+ ++ TG +L+GHT V + A A K L C S D TIK WDF
Sbjct: 129 TIKVWDYETGQLEKTLKGHTDAVNDI----AIDAAGKQLVSC---STDLTIKLWDF 177
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 15 FSNDVKRLL-VCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS D K L +TV ++ + G +S GHT PV V P +L+ +
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF----HPNEYLLA---SG 207
Query: 74 SLDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKG 108
S D TI++WD KF + S + G+ G
Sbjct: 208 SSDRTIRFWDLE----------KFQVVSCIEGEPG 232
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V+++S + I SL GHT+PV +V + +TP I++ S +I+ WD ++
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRL---NTPEELIVA----GSQSGSIRVWDLEAAKI 97
Query: 90 LKTI 93
L+T+
Sbjct: 98 LRTL 101
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 15 FSNDVKRLL-VCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73
FS D K L +TV ++ + G +S GHT PV V P +L+ +
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV----EFHPNEYLLA---SG 207
Query: 74 SLDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKG 108
S D TI++WD KF + S + G+ G
Sbjct: 208 SSDRTIRFWDLE----------KFQVVSCIEGEPG 232
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 30 VSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89
V+++S + I SL GHT+PV +V + +TP I++ S +I+ WD ++
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRL---NTPEELIVA----GSQSGSIRVWDLEAAKI 97
Query: 90 LKTI 93
L+T+
Sbjct: 98 LRTL 101
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 26 TSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85
+ T ++ STG + GHTAPV ++ V P + T S D I WD
Sbjct: 629 SDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG-------RWLSTGSEDGIINVWDIG 681
Query: 86 TPELLKTI--DVKFPIFSMVRGKKG 108
T + LK + K I+S+ K+G
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEG 706
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,639,584
Number of Sequences: 539616
Number of extensions: 1296176
Number of successful extensions: 6248
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 5035
Number of HSP's gapped (non-prelim): 1490
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)