Query 033738
Match_columns 112
No_of_seqs 176 out of 1653
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 09:13:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.9 5.9E-23 2E-27 121.6 12.9 102 2-111 9-112 (304)
2 3ow8_A WD repeat-containing pr 99.9 1.9E-22 6.6E-27 120.4 14.6 102 2-111 202-305 (321)
3 2ymu_A WD-40 repeat protein; u 99.9 7.4E-23 2.5E-27 129.1 13.1 100 2-111 12-113 (577)
4 1vyh_C Platelet-activating fac 99.9 2.3E-22 7.8E-27 123.3 11.1 102 2-111 104-207 (410)
5 4ery_A WD repeat-containing pr 99.9 2.8E-21 9.5E-26 114.4 14.1 103 2-112 19-123 (312)
6 3ow8_A WD repeat-containing pr 99.9 1.5E-21 5.2E-26 116.5 12.8 101 3-111 161-263 (321)
7 2xzm_R RACK1; ribosome, transl 99.9 2.4E-21 8.2E-26 116.3 13.1 102 2-111 17-133 (343)
8 3zwl_B Eukaryotic translation 99.9 5.2E-21 1.8E-25 114.6 13.8 102 2-111 28-130 (369)
9 1vyh_C Platelet-activating fac 99.9 2.8E-21 9.6E-26 118.5 12.8 102 2-111 146-249 (410)
10 1got_B GT-beta; complex (GTP-b 99.9 7.4E-21 2.5E-25 114.1 13.8 102 2-111 180-285 (340)
11 3frx_A Guanine nucleotide-bind 99.9 5.2E-21 1.8E-25 114.0 12.8 102 2-111 13-122 (319)
12 4gqb_B Methylosome protein 50; 99.9 2.7E-21 9.2E-26 116.5 11.6 100 3-109 124-227 (344)
13 4ery_A WD repeat-containing pr 99.9 1.4E-20 4.7E-25 111.5 14.0 102 2-111 61-164 (312)
14 2pm7_B Protein transport prote 99.9 8.6E-21 3E-25 112.0 12.3 102 2-111 5-116 (297)
15 2ynn_A Coatomer subunit beta'; 99.9 1.4E-20 4.6E-25 111.5 12.3 102 2-111 51-156 (304)
16 2pbi_B Guanine nucleotide-bind 99.9 2.9E-20 9.9E-25 112.2 13.6 101 3-111 151-255 (354)
17 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.6E-20 5.4E-25 112.9 12.4 102 2-111 11-120 (345)
18 3bg1_A Protein SEC13 homolog; 99.9 7.1E-21 2.4E-25 113.3 10.1 102 2-111 9-120 (316)
19 2aq5_A Coronin-1A; WD40 repeat 99.9 3.3E-20 1.1E-24 113.2 13.2 103 2-111 77-191 (402)
20 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.7E-20 1.3E-24 111.3 13.2 101 3-111 58-165 (345)
21 1nr0_A Actin interacting prote 99.9 4.3E-20 1.5E-24 118.0 14.0 103 2-112 186-340 (611)
22 1nr0_A Actin interacting prote 99.9 4.2E-20 1.4E-24 118.1 13.6 102 2-111 143-254 (611)
23 2ymu_A WD-40 repeat protein; u 99.8 3.5E-20 1.2E-24 117.0 12.9 101 2-112 463-565 (577)
24 3iz6_a 40S ribosomal protein R 99.8 4.2E-20 1.4E-24 112.3 12.6 103 2-112 245-360 (380)
25 3f3f_A Nucleoporin SEH1; struc 99.8 5.3E-20 1.8E-24 109.2 12.8 102 2-111 7-127 (351)
26 2hes_X YDR267CP; beta-propelle 99.8 5E-20 1.7E-24 110.2 12.6 98 2-107 103-208 (330)
27 1got_B GT-beta; complex (GTP-b 99.8 7E-20 2.4E-24 109.9 13.0 101 2-111 139-241 (340)
28 4gqb_B Methylosome protein 50; 99.8 3.5E-20 1.2E-24 111.7 11.6 99 5-111 213-314 (344)
29 2hes_X YDR267CP; beta-propelle 99.8 1.1E-19 3.6E-24 108.8 13.5 99 5-111 57-168 (330)
30 3mkq_A Coatomer beta'-subunit; 99.8 5.7E-20 1.9E-24 119.8 12.9 102 2-111 9-112 (814)
31 3frx_A Guanine nucleotide-bind 99.8 2.1E-19 7.2E-24 107.1 14.0 102 2-111 144-252 (319)
32 2pbi_B Guanine nucleotide-bind 99.8 1.6E-19 5.4E-24 109.0 13.4 102 2-111 236-341 (354)
33 3jrp_A Fusion protein of prote 99.8 5.4E-20 1.9E-24 110.7 11.1 103 1-111 6-118 (379)
34 3mmy_A MRNA export factor; mRN 99.8 2.7E-19 9.4E-24 107.1 13.6 102 2-111 35-144 (368)
35 1erj_A Transcriptional repress 99.8 3E-19 1E-23 109.0 13.9 96 8-111 125-222 (393)
36 1erj_A Transcriptional repress 99.8 2.6E-19 9E-24 109.2 13.5 101 4-112 62-181 (393)
37 4g56_B MGC81050 protein; prote 99.8 1.5E-19 5E-24 109.3 12.2 101 4-111 224-327 (357)
38 4h5i_A Guanine nucleotide-exch 99.8 1.4E-19 4.7E-24 109.7 11.5 102 3-112 216-328 (365)
39 3dm0_A Maltose-binding peripla 99.8 2.8E-19 9.4E-24 115.6 13.2 102 2-111 378-487 (694)
40 2xzm_R RACK1; ribosome, transl 99.8 5.6E-19 1.9E-23 106.0 13.6 98 2-108 72-174 (343)
41 4g56_B MGC81050 protein; prote 99.8 9.4E-20 3.2E-24 110.1 9.9 100 3-109 136-239 (357)
42 3vl1_A 26S proteasome regulato 99.8 1.1E-19 3.8E-24 111.0 10.3 95 2-104 135-234 (420)
43 3lrv_A PRE-mRNA-splicing facto 99.8 3.6E-19 1.2E-23 106.8 11.6 100 4-111 123-229 (343)
44 3iz6_a 40S ribosomal protein R 99.8 5.4E-19 1.8E-23 107.4 11.8 102 3-112 202-314 (380)
45 4h5i_A Guanine nucleotide-exch 99.8 2.8E-19 9.4E-24 108.4 10.2 78 2-87 265-344 (365)
46 3vu4_A KMHSV2; beta-propeller 99.8 6.5E-19 2.2E-23 106.4 11.7 78 2-87 191-272 (355)
47 3dwl_C Actin-related protein 2 99.8 7.6E-20 2.6E-24 110.5 7.5 100 4-111 9-115 (377)
48 4aow_A Guanine nucleotide-bind 99.8 1.9E-18 6.5E-23 102.8 13.4 102 2-111 34-143 (340)
49 2aq5_A Coronin-1A; WD40 repeat 99.8 7.9E-19 2.7E-23 107.1 11.9 102 2-111 127-235 (402)
50 2w18_A PALB2, fancn, partner a 99.8 1.3E-18 4.5E-23 104.4 12.5 106 3-112 175-342 (356)
51 3dwl_C Actin-related protein 2 99.8 1.9E-19 6.4E-24 108.8 9.0 102 2-111 51-161 (377)
52 1pgu_A Actin interacting prote 99.8 7.6E-19 2.6E-23 111.3 12.1 100 2-109 484-597 (615)
53 1k8k_C P40, ARP2/3 complex 41 99.8 1.6E-18 5.6E-23 104.2 13.0 103 2-112 4-112 (372)
54 1gxr_A ESG1, transducin-like e 99.8 2.6E-18 9.1E-23 101.9 13.7 102 2-111 137-239 (337)
55 4aez_A CDC20, WD repeat-contai 99.8 1.3E-18 4.5E-23 106.2 12.6 104 2-112 213-319 (401)
56 3k26_A Polycomb protein EED; W 99.8 1.7E-18 6E-23 103.7 12.8 100 5-112 68-177 (366)
57 3sfz_A APAF-1, apoptotic pepti 99.8 1.3E-18 4.3E-23 117.7 13.5 100 2-109 611-712 (1249)
58 3dw8_B Serine/threonine-protei 99.8 3.6E-18 1.2E-22 104.9 13.5 102 3-112 174-301 (447)
59 3vl1_A 26S proteasome regulato 99.8 3.7E-18 1.3E-22 104.3 12.9 93 13-112 103-197 (420)
60 3jro_A Fusion protein of prote 99.8 8.5E-19 2.9E-23 114.4 10.6 103 1-111 4-116 (753)
61 3dm0_A Maltose-binding peripla 99.8 3.4E-18 1.2E-22 110.5 13.0 101 3-111 514-617 (694)
62 1sq9_A Antiviral protein SKI8; 99.8 5.7E-18 1.9E-22 102.7 13.0 95 6-108 233-366 (397)
63 1k8k_C P40, ARP2/3 complex 41 99.8 6.2E-18 2.1E-22 101.7 12.9 101 3-111 139-259 (372)
64 2j04_B YDR362CP, TAU91; beta p 99.8 4E-19 1.4E-23 112.2 7.9 102 2-111 304-412 (524)
65 1gxr_A ESG1, transducin-like e 99.8 1.4E-17 4.7E-22 98.8 14.0 100 4-111 95-198 (337)
66 2pm7_B Protein transport prote 99.8 5.3E-18 1.8E-22 100.1 12.0 103 2-111 141-269 (297)
67 4e54_B DNA damage-binding prot 99.8 1.6E-18 5.6E-23 106.9 10.0 100 4-111 117-224 (435)
68 3sfz_A APAF-1, apoptotic pepti 99.8 8.2E-18 2.8E-22 113.8 14.1 104 2-111 653-758 (1249)
69 2j04_A TAU60, YPL007P, hypothe 99.8 6.7E-18 2.3E-22 106.8 12.7 94 4-108 83-194 (588)
70 3odt_A Protein DOA1; ubiquitin 99.8 1.1E-17 3.8E-22 98.5 12.8 97 5-111 183-281 (313)
71 4gq1_A NUP37; propeller, trans 99.8 1.3E-18 4.4E-23 106.3 8.8 82 2-90 132-222 (393)
72 2oaj_A Protein SNI1; WD40 repe 99.8 8.7E-18 3E-22 111.5 13.3 100 3-112 14-114 (902)
73 1pgu_A Actin interacting prote 99.8 1.1E-17 3.9E-22 105.9 13.1 101 3-111 15-131 (615)
74 1r5m_A SIR4-interacting protei 99.8 1.5E-17 5.2E-22 101.2 13.2 102 2-112 243-346 (425)
75 1sq9_A Antiviral protein SKI8; 99.8 2.3E-17 7.7E-22 100.1 13.5 101 3-112 183-307 (397)
76 2oaj_A Protein SNI1; WD40 repe 99.8 4E-18 1.4E-22 113.1 10.9 101 2-111 431-589 (902)
77 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.3E-17 4.5E-22 103.2 12.4 102 2-112 191-323 (450)
78 3mkq_A Coatomer beta'-subunit; 99.8 6.2E-18 2.1E-22 110.3 11.4 102 2-111 51-156 (814)
79 3lrv_A PRE-mRNA-splicing facto 99.8 6.4E-18 2.2E-22 101.4 10.2 99 5-112 169-276 (343)
80 3ei3_B DNA damage-binding prot 99.8 1.8E-17 6.3E-22 100.4 12.2 101 2-111 69-178 (383)
81 3zwl_B Eukaryotic translation 99.8 3.8E-17 1.3E-21 97.9 13.3 96 8-111 177-274 (369)
82 3ei3_B DNA damage-binding prot 99.8 3.1E-17 1.1E-21 99.4 12.9 99 5-111 162-266 (383)
83 3bg1_A Protein SEC13 homolog; 99.8 1.2E-17 4E-22 99.4 10.7 106 2-111 146-277 (316)
84 4aow_A Guanine nucleotide-bind 99.8 1.3E-16 4.3E-21 95.0 14.8 102 2-111 167-271 (340)
85 1r5m_A SIR4-interacting protei 99.8 4.2E-17 1.4E-21 99.3 12.9 99 5-112 44-165 (425)
86 2oit_A Nucleoporin 214KDA; NH2 99.8 4.9E-18 1.7E-22 105.1 8.8 99 6-111 92-207 (434)
87 2xyi_A Probable histone-bindin 99.8 2.9E-17 1E-21 101.2 12.2 102 2-110 227-335 (430)
88 3v7d_B Cell division control p 99.7 5.7E-17 1.9E-21 100.3 12.6 100 2-111 117-220 (464)
89 2oit_A Nucleoporin 214KDA; NH2 99.7 3.9E-17 1.3E-21 101.1 11.7 101 2-111 145-255 (434)
90 4e54_B DNA damage-binding prot 99.7 3E-17 1E-21 101.2 11.0 100 2-110 160-264 (435)
91 2xyi_A Probable histone-bindin 99.7 1.1E-16 3.9E-21 98.6 13.4 102 2-110 177-291 (430)
92 2pm9_A Protein WEB1, protein t 99.7 3.1E-17 1.1E-21 99.9 10.5 100 4-111 212-321 (416)
93 1yfq_A Cell cycle arrest prote 99.7 4.5E-17 1.5E-21 97.0 10.9 100 2-111 7-115 (342)
94 4a11_B DNA excision repair pro 99.7 1E-16 3.6E-21 97.1 12.6 101 2-109 39-154 (408)
95 2j04_B YDR362CP, TAU91; beta p 99.7 7E-18 2.4E-22 106.5 7.6 101 2-111 262-370 (524)
96 3jrp_A Fusion protein of prote 99.7 1.2E-16 3.9E-21 96.2 12.5 97 2-106 51-157 (379)
97 4ggc_A P55CDC, cell division c 99.7 3.2E-16 1.1E-20 92.5 14.0 87 9-104 28-117 (318)
98 2pm9_A Protein WEB1, protein t 99.7 5.6E-17 1.9E-21 98.8 11.0 101 2-109 109-227 (416)
99 3dw8_B Serine/threonine-protei 99.7 1.9E-17 6.4E-22 101.8 8.9 101 2-111 222-357 (447)
100 4aez_A CDC20, WD repeat-contai 99.7 2.8E-16 9.5E-21 96.0 13.5 98 5-112 133-233 (401)
101 3f3f_A Nucleoporin SEH1; struc 99.7 5.8E-17 2E-21 96.2 10.0 98 2-107 53-178 (351)
102 3k26_A Polycomb protein EED; W 99.7 1.8E-16 6E-21 95.0 12.1 106 2-111 14-131 (366)
103 3i2n_A WD repeat-containing pr 99.7 5E-17 1.7E-21 97.2 9.4 102 3-111 206-336 (357)
104 3i2n_A WD repeat-containing pr 99.7 4.9E-17 1.7E-21 97.2 9.0 102 2-111 14-132 (357)
105 3odt_A Protein DOA1; ubiquitin 99.7 2.8E-16 9.5E-21 92.5 11.7 95 2-105 14-113 (313)
106 3v7d_B Cell division control p 99.7 3.2E-16 1.1E-20 97.0 12.4 100 2-111 306-406 (464)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.7 2E-16 6.8E-21 97.9 11.3 100 4-112 147-256 (450)
108 3vu4_A KMHSV2; beta-propeller 99.7 6.2E-16 2.1E-20 93.4 13.1 85 20-111 148-255 (355)
109 4gq1_A NUP37; propeller, trans 99.7 4.6E-17 1.6E-21 99.4 7.8 90 13-109 95-199 (393)
110 4a11_B DNA excision repair pro 99.7 9.9E-16 3.4E-20 92.9 13.4 103 2-112 182-350 (408)
111 1yfq_A Cell cycle arrest prote 99.7 4.1E-16 1.4E-20 92.9 11.2 98 4-111 191-307 (342)
112 4gga_A P55CDC, cell division c 99.7 1.5E-15 5.1E-20 93.3 13.8 90 8-106 107-199 (420)
113 4gga_A P55CDC, cell division c 99.7 1.9E-15 6.6E-20 92.8 14.1 99 3-111 144-245 (420)
114 3bws_A Protein LP49; two-domai 99.7 5.3E-16 1.8E-20 95.1 11.5 103 3-112 166-269 (433)
115 3mmy_A MRNA export factor; mRN 99.7 6.9E-16 2.4E-20 92.4 11.6 96 2-106 82-180 (368)
116 3gre_A Serine/threonine-protei 99.7 5.7E-16 2E-20 95.2 10.9 94 5-106 167-267 (437)
117 3jro_A Fusion protein of prote 99.7 8.9E-16 3E-20 100.3 11.6 98 2-107 49-156 (753)
118 3gre_A Serine/threonine-protei 99.7 4.7E-17 1.6E-21 100.0 4.7 88 5-96 213-302 (437)
119 2hqs_A Protein TOLB; TOLB, PAL 99.7 3.1E-15 1.1E-19 92.1 12.0 100 2-111 174-281 (415)
120 1l0q_A Surface layer protein; 99.6 1.2E-14 4.2E-19 88.1 13.5 97 7-111 32-130 (391)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.6 9.6E-15 3.3E-19 90.1 12.6 94 2-106 114-209 (445)
122 2j04_A TAU60, YPL007P, hypothe 99.6 9E-15 3.1E-19 92.8 11.6 88 8-105 131-235 (588)
123 3bws_A Protein LP49; two-domai 99.6 2E-14 6.9E-19 88.2 11.5 97 8-112 124-227 (433)
124 1p22_A F-BOX/WD-repeat protein 99.6 4E-14 1.4E-18 87.3 12.4 96 2-111 252-349 (435)
125 1p22_A F-BOX/WD-repeat protein 99.6 4.7E-14 1.6E-18 87.0 12.3 84 14-106 138-223 (435)
126 2ovr_B FBW7, F-BOX/WD repeat p 99.6 8.5E-14 2.9E-18 85.9 13.3 91 2-104 155-247 (445)
127 4ggc_A P55CDC, cell division c 99.6 1.9E-13 6.5E-18 80.6 14.2 99 3-111 64-165 (318)
128 1l0q_A Surface layer protein; 99.6 1.3E-13 4.5E-18 83.6 13.3 98 7-112 116-215 (391)
129 2w18_A PALB2, fancn, partner a 99.6 4.2E-14 1.5E-18 85.1 9.6 78 27-111 156-241 (356)
130 1k32_A Tricorn protease; prote 99.5 9E-14 3.1E-18 93.5 11.4 100 4-112 376-487 (1045)
131 2hqs_A Protein TOLB; TOLB, PAL 99.5 2E-13 6.9E-18 84.1 12.0 101 3-112 219-326 (415)
132 3u4y_A Uncharacterized protein 99.5 1.5E-12 5.3E-17 77.3 11.6 94 11-112 44-143 (331)
133 2ojh_A Uncharacterized protein 99.5 1E-12 3.6E-17 76.4 10.1 100 3-111 38-143 (297)
134 1nir_A Nitrite reductase; hemo 99.5 1.6E-12 5.4E-17 82.6 11.6 92 13-112 143-241 (543)
135 1xfd_A DIP, dipeptidyl aminope 99.5 8.5E-13 2.9E-17 85.6 10.4 99 5-111 112-269 (723)
136 2ecf_A Dipeptidyl peptidase IV 99.5 1.2E-12 4E-17 85.2 10.7 94 9-111 111-223 (741)
137 2z3z_A Dipeptidyl aminopeptida 99.4 1.2E-12 4E-17 84.9 10.4 100 4-111 118-272 (706)
138 3vgz_A Uncharacterized protein 99.4 5.3E-12 1.8E-16 75.4 12.5 98 6-112 230-329 (353)
139 2ecf_A Dipeptidyl peptidase IV 99.4 1E-12 3.4E-17 85.5 9.6 95 7-111 37-166 (741)
140 2ojh_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 77.2 7.5 102 3-112 169-287 (297)
141 3vgz_A Uncharacterized protein 99.4 2.2E-11 7.6E-16 72.7 13.9 99 6-112 184-287 (353)
142 1ri6_A Putative isomerase YBHE 99.4 3.5E-12 1.2E-16 75.8 9.5 100 5-112 36-144 (343)
143 1xfd_A DIP, dipeptidyl aminope 99.4 1.9E-12 6.6E-17 83.9 8.5 93 9-111 63-187 (723)
144 3o4h_A Acylamino-acid-releasin 99.4 8.9E-13 3E-17 83.9 6.2 92 10-111 153-260 (582)
145 1z68_A Fibroblast activation p 99.4 8.2E-13 2.8E-17 85.7 5.7 92 13-111 21-124 (719)
146 1nir_A Nitrite reductase; hemo 99.4 4.3E-11 1.5E-15 76.1 13.1 94 9-111 181-294 (543)
147 1pby_B Quinohemoprotein amine 99.4 1.7E-11 5.9E-16 72.7 10.5 97 8-112 35-150 (337)
148 3u4y_A Uncharacterized protein 99.4 2.1E-11 7.1E-16 72.5 10.7 97 9-112 130-236 (331)
149 1k32_A Tricorn protease; prote 99.3 1.5E-11 5E-16 83.0 10.0 98 4-111 334-435 (1045)
150 4a5s_A Dipeptidyl peptidase 4 99.3 1.6E-11 5.5E-16 80.3 9.7 96 7-111 17-126 (740)
151 1jmx_B Amine dehydrogenase; ox 99.3 4.4E-11 1.5E-15 71.3 10.3 94 13-112 5-107 (349)
152 3scy_A Hypothetical bacterial 99.3 1.6E-10 5.5E-15 69.6 12.1 96 9-112 213-321 (361)
153 3o4h_A Acylamino-acid-releasin 99.3 9.8E-12 3.3E-16 79.2 6.9 96 2-111 190-296 (582)
154 3hfq_A Uncharacterized protein 99.3 1.9E-10 6.5E-15 68.9 12.1 100 5-112 84-202 (347)
155 1ri6_A Putative isomerase YBHE 99.3 6.5E-11 2.2E-15 70.3 9.9 96 8-112 85-193 (343)
156 2z3z_A Dipeptidyl aminopeptida 99.3 1.2E-11 4.2E-16 80.1 7.2 95 7-112 82-196 (706)
157 3azo_A Aminopeptidase; POP fam 99.3 5.1E-11 1.7E-15 76.8 9.6 98 5-111 128-256 (662)
158 1z68_A Fibroblast activation p 99.3 1.4E-11 5E-16 80.0 6.8 97 7-111 110-267 (719)
159 1jmx_B Amine dehydrogenase; ox 99.2 8.2E-11 2.8E-15 70.1 8.9 94 8-109 44-160 (349)
160 3scy_A Hypothetical bacterial 99.2 3.5E-10 1.2E-14 68.1 11.2 95 10-112 158-274 (361)
161 3pe7_A Oligogalacturonate lyas 99.2 1.3E-09 4.4E-14 66.0 12.5 104 4-111 78-203 (388)
162 3pe7_A Oligogalacturonate lyas 99.2 6.1E-10 2.1E-14 67.4 10.9 95 9-111 38-139 (388)
163 2bkl_A Prolyl endopeptidase; m 99.2 1.1E-10 3.7E-15 76.0 7.9 100 4-111 118-241 (695)
164 1pby_B Quinohemoprotein amine 99.2 3E-10 1E-14 67.3 9.2 87 20-112 2-97 (337)
165 3hfq_A Uncharacterized protein 99.2 4.4E-10 1.5E-14 67.3 10.0 95 6-109 39-153 (347)
166 2oiz_A Aromatic amine dehydrog 99.2 1.2E-09 4E-14 66.4 11.9 87 13-109 259-360 (361)
167 4a5s_A Dipeptidyl peptidase 4 99.2 2.4E-10 8.3E-15 74.8 9.4 90 13-111 67-185 (740)
168 2xdw_A Prolyl endopeptidase; a 99.2 3.6E-10 1.2E-14 73.7 9.4 96 8-112 126-248 (710)
169 3azo_A Aminopeptidase; POP fam 99.1 1.5E-09 5.3E-14 70.0 10.8 101 4-112 185-309 (662)
170 2gop_A Trilobed protease; beta 99.1 1.1E-09 3.9E-14 65.4 9.4 91 9-111 61-184 (347)
171 1jof_A Carboxy-CIS,CIS-muconat 99.1 9.1E-09 3.1E-13 62.3 13.0 99 6-112 144-270 (365)
172 2dg1_A DRP35, lactonase; beta 99.1 1.7E-08 5.7E-13 60.2 13.5 99 5-111 43-149 (333)
173 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.3E-08 4.5E-13 61.6 11.5 96 9-112 85-208 (365)
174 3c5m_A Oligogalacturonate lyas 99.0 3.4E-09 1.2E-13 64.2 7.5 80 8-96 37-121 (396)
175 3e5z_A Putative gluconolactona 99.0 3.4E-08 1.2E-12 58.1 11.3 96 6-111 27-129 (296)
176 3g4e_A Regucalcin; six bladed 98.9 8.9E-08 3.1E-12 56.5 12.4 95 10-112 152-257 (297)
177 1q7f_A NHL, brain tumor CG1071 98.9 1.4E-07 4.9E-12 55.0 12.7 95 7-111 164-265 (286)
178 1xip_A Nucleoporin NUP159; bet 98.9 5.3E-08 1.8E-12 59.9 11.0 89 5-109 87-175 (388)
179 3c5m_A Oligogalacturonate lyas 98.9 7.3E-09 2.5E-13 62.7 7.0 92 13-111 86-203 (396)
180 3e5z_A Putative gluconolactona 98.9 9.1E-08 3.1E-12 56.2 11.3 95 7-112 172-272 (296)
181 1qks_A Cytochrome CD1 nitrite 98.9 9E-08 3.1E-12 61.5 11.9 85 20-112 168-259 (567)
182 3no2_A Uncharacterized protein 98.9 1E-07 3.4E-12 56.0 11.1 85 18-112 4-92 (276)
183 3fvz_A Peptidyl-glycine alpha- 98.9 4.8E-08 1.6E-12 58.4 9.9 94 8-110 197-305 (329)
184 1yr2_A Prolyl oligopeptidase; 98.8 2E-08 6.9E-13 65.9 8.0 94 8-111 164-282 (741)
185 1q7f_A NHL, brain tumor CG1071 98.8 5.2E-07 1.8E-11 52.7 12.6 95 7-111 121-221 (286)
186 3fvz_A Peptidyl-glycine alpha- 98.8 3.9E-07 1.3E-11 54.5 12.2 98 6-111 23-158 (329)
187 2oiz_A Aromatic amine dehydrog 98.8 3.5E-08 1.2E-12 59.9 7.6 87 17-112 13-123 (361)
188 2dg1_A DRP35, lactonase; beta 98.8 8.2E-07 2.8E-11 52.8 12.8 98 6-111 86-196 (333)
189 2gop_A Trilobed protease; beta 98.7 1.8E-07 6.1E-12 55.9 9.7 87 9-111 17-118 (347)
190 2xdw_A Prolyl endopeptidase; a 98.7 3.4E-07 1.2E-11 59.9 11.1 97 9-111 173-300 (710)
191 2bkl_A Prolyl endopeptidase; m 98.7 4.3E-07 1.5E-11 59.3 11.3 91 10-109 171-283 (695)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 7.5E-07 2.6E-11 52.5 11.3 92 13-111 177-282 (314)
193 2ghs_A AGR_C_1268P; regucalcin 98.7 2.6E-06 8.9E-11 51.0 13.7 94 10-112 182-287 (326)
194 1rwi_B Serine/threonine-protei 98.7 3.1E-06 1.1E-10 48.8 13.0 96 8-111 151-248 (270)
195 1xip_A Nucleoporin NUP159; bet 98.7 3.5E-07 1.2E-11 56.3 9.2 91 5-111 125-228 (388)
196 1qks_A Cytochrome CD1 nitrite 98.6 3.7E-06 1.3E-10 54.1 13.6 92 10-109 200-310 (567)
197 3sjl_D Methylamine dehydrogena 98.6 3.4E-07 1.1E-11 56.3 8.4 93 13-112 38-152 (386)
198 3iuj_A Prolyl endopeptidase; h 98.6 2.1E-07 7.1E-12 60.9 7.8 97 5-111 127-248 (693)
199 3dsm_A Uncharacterized protein 98.6 2.8E-06 9.7E-11 50.9 11.2 95 8-112 132-240 (328)
200 3no2_A Uncharacterized protein 98.5 8.7E-06 3E-10 47.8 12.6 90 13-111 130-227 (276)
201 2mad_H Methylamine dehydrogena 98.5 4.8E-06 1.6E-10 51.0 11.6 88 16-112 29-140 (373)
202 3c75_H MADH, methylamine dehyd 98.5 7.8E-07 2.7E-11 55.4 7.9 88 17-112 82-192 (426)
203 1rwi_B Serine/threonine-protei 98.5 1E-05 3.5E-10 46.7 11.6 95 7-110 67-163 (270)
204 2mad_H Methylamine dehydrogena 98.5 1.2E-05 4.3E-10 49.1 12.4 76 11-95 70-166 (373)
205 2qe8_A Uncharacterized protein 98.5 9.4E-06 3.2E-10 48.9 11.6 101 5-112 65-210 (343)
206 1mda_H Methylamine dehydrogena 98.5 2.2E-06 7.4E-11 52.5 8.8 77 29-112 47-139 (368)
207 2iwa_A Glutamine cyclotransfer 98.4 1.1E-05 3.7E-10 47.3 10.9 92 13-112 110-221 (266)
208 1mda_H Methylamine dehydrogena 98.4 5.1E-06 1.7E-10 50.9 9.9 87 13-106 269-366 (368)
209 3dsm_A Uncharacterized protein 98.4 6.7E-06 2.3E-10 49.2 9.4 94 9-111 86-186 (328)
210 2z2n_A Virginiamycin B lyase; 98.4 5.8E-05 2E-09 43.9 13.2 96 5-111 13-113 (299)
211 3g4e_A Regucalcin; six bladed 98.3 5.8E-05 2E-09 44.5 12.8 88 13-111 18-112 (297)
212 1fwx_A Nitrous oxide reductase 98.3 1.7E-06 5.8E-11 55.8 6.1 94 10-112 280-403 (595)
213 3sjl_D Methylamine dehydrogena 98.3 1.4E-05 4.8E-10 49.2 9.7 89 13-107 285-384 (386)
214 1yr2_A Prolyl oligopeptidase; 98.3 2.5E-05 8.7E-10 51.5 11.4 92 10-111 212-330 (741)
215 3dr2_A Exported gluconolactona 98.3 2.4E-05 8.3E-10 46.2 10.2 93 8-111 46-145 (305)
216 3c75_H MADH, methylamine dehyd 98.2 1.6E-05 5.5E-10 49.6 9.0 92 13-111 123-242 (426)
217 3nol_A Glutamine cyclotransfer 98.2 7.1E-05 2.4E-09 43.8 10.9 92 13-112 130-240 (262)
218 2z2n_A Virginiamycin B lyase; 98.2 0.00016 5.6E-09 42.0 13.6 94 7-111 57-155 (299)
219 3hrp_A Uncharacterized protein 98.2 2.4E-05 8.3E-10 48.4 9.2 91 8-108 132-230 (409)
220 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 5.2E-05 1.8E-09 44.6 10.3 95 7-111 71-190 (314)
221 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00014 4.8E-09 43.5 12.2 88 13-111 54-148 (326)
222 3dr2_A Exported gluconolactona 98.2 4.5E-05 1.5E-09 45.1 9.7 90 13-112 193-292 (305)
223 2xe4_A Oligopeptidase B; hydro 98.1 2.3E-05 7.7E-10 52.0 8.7 94 9-112 176-286 (751)
224 3nok_A Glutaminyl cyclase; bet 98.1 9.9E-05 3.4E-09 43.3 10.4 92 13-112 139-250 (268)
225 2ece_A 462AA long hypothetical 98.1 0.00011 3.7E-09 46.3 11.0 92 13-112 143-268 (462)
226 3hrp_A Uncharacterized protein 98.1 6.2E-05 2.1E-09 46.6 9.9 92 13-111 176-281 (409)
227 3mbr_X Glutamine cyclotransfer 98.1 0.00031 1.1E-08 40.7 11.7 92 13-112 108-219 (243)
228 1npe_A Nidogen, entactin; glyc 98.1 0.00034 1.2E-08 40.5 13.2 93 13-111 41-136 (267)
229 2iwa_A Glutamine cyclotransfer 98.0 0.00015 5.1E-09 42.6 9.7 91 10-111 24-119 (266)
230 1kb0_A Quinohemoprotein alcoho 98.0 7.4E-05 2.5E-09 49.1 8.8 74 28-109 457-532 (677)
231 3iuj_A Prolyl endopeptidase; h 98.0 0.00027 9.1E-09 46.5 11.1 93 13-111 180-294 (693)
232 2qc5_A Streptogramin B lactona 97.9 0.00063 2.1E-08 39.5 13.6 94 7-111 20-118 (300)
233 1yiq_A Quinohemoprotein alcoho 97.9 0.00014 4.8E-09 47.9 9.6 75 28-110 455-531 (689)
234 2ece_A 462AA long hypothetical 97.9 0.00049 1.7E-08 43.4 10.9 94 13-112 193-336 (462)
235 2qc5_A Streptogramin B lactona 97.9 0.00082 2.8E-08 39.0 13.6 94 7-110 62-159 (300)
236 3qqz_A Putative uncharacterize 97.9 0.00082 2.8E-08 39.2 10.8 100 4-112 24-136 (255)
237 2qe8_A Uncharacterized protein 97.8 0.00016 5.5E-09 43.5 8.1 95 9-111 197-305 (343)
238 3pbp_A Nucleoporin NUP82; beta 97.8 0.00092 3.2E-08 41.9 11.2 98 8-111 67-194 (452)
239 3nol_A Glutamine cyclotransfer 97.7 0.00064 2.2E-08 39.8 8.7 77 13-97 48-127 (262)
240 2hz6_A Endoplasmic reticulum t 97.7 6.1E-05 2.1E-09 46.0 4.5 67 18-93 8-75 (369)
241 3nok_A Glutaminyl cyclase; bet 97.6 0.00094 3.2E-08 39.2 8.8 76 13-97 60-136 (268)
242 3v65_B Low-density lipoprotein 97.5 0.0047 1.6E-07 38.0 11.5 97 9-112 118-217 (386)
243 2xe4_A Oligopeptidase B; hydro 97.5 0.0018 6E-08 43.2 9.9 72 12-87 225-305 (751)
244 3v64_C Agrin; beta propeller, 97.4 0.0064 2.2E-07 36.9 12.5 97 9-112 75-174 (349)
245 1npe_A Nidogen, entactin; glyc 97.4 0.0059 2E-07 35.3 13.7 97 8-112 80-182 (267)
246 2fp8_A Strictosidine synthase; 97.4 0.0064 2.2E-07 36.1 10.3 95 9-112 82-200 (322)
247 3tc9_A Hypothetical hydrolase; 97.3 0.0075 2.6E-07 37.7 10.7 94 9-112 181-285 (430)
248 1fwx_A Nitrous oxide reductase 97.3 0.0028 9.7E-08 41.3 8.6 88 18-112 100-210 (595)
249 1ijq_A LDL receptor, low-densi 97.3 0.0087 3E-07 35.7 12.5 97 9-112 32-135 (316)
250 2ad6_A Methanol dehydrogenase 97.3 0.0038 1.3E-07 40.4 9.2 62 28-97 444-505 (571)
251 1flg_A Protein (quinoprotein e 97.3 0.0036 1.2E-07 40.7 8.8 75 27-109 465-541 (582)
252 3v65_B Low-density lipoprotein 97.3 0.012 4.1E-07 36.2 12.9 97 9-112 161-261 (386)
253 2hz6_A Endoplasmic reticulum t 97.2 0.00063 2.2E-08 41.5 5.1 90 14-109 125-216 (369)
254 3v64_C Agrin; beta propeller, 97.2 0.013 4.5E-07 35.5 12.6 93 13-112 121-218 (349)
255 3hxj_A Pyrrolo-quinoline quino 97.1 0.0095 3.2E-07 35.1 9.3 88 9-109 139-227 (330)
256 3p5b_L Low density lipoprotein 97.1 0.017 5.8E-07 35.8 13.2 98 8-112 113-217 (400)
257 3hxj_A Pyrrolo-quinoline quino 97.1 0.014 4.6E-07 34.5 10.0 93 7-110 215-308 (330)
258 3m0c_C LDL receptor, low-densi 97.0 0.035 1.2E-06 37.6 14.3 98 8-112 472-573 (791)
259 2p4o_A Hypothetical protein; p 97.0 0.0087 3E-07 35.4 8.4 89 15-112 174-273 (306)
260 3mbr_X Glutamine cyclotransfer 97.0 0.019 6.6E-07 33.3 10.8 77 13-97 26-105 (243)
261 1ijq_A LDL receptor, low-densi 96.9 0.025 8.6E-07 33.8 14.3 96 9-112 79-179 (316)
262 3m0c_C LDL receptor, low-densi 96.9 0.05 1.7E-06 36.9 12.6 97 9-112 426-529 (791)
263 1n7d_A LDL receptor, low-densi 96.9 0.0063 2.2E-07 40.4 7.4 97 8-111 407-510 (699)
264 4hw6_A Hypothetical protein, I 96.7 0.031 1.1E-06 35.0 9.5 95 9-112 184-288 (433)
265 1kb0_A Quinohemoprotein alcoho 96.7 0.012 4.3E-07 38.9 8.0 25 20-44 328-353 (677)
266 3p5b_L Low density lipoprotein 96.7 0.045 1.6E-06 33.9 13.1 94 13-112 164-261 (400)
267 1w6s_A Methanol dehydrogenase 96.6 0.036 1.2E-06 36.3 9.4 74 28-109 453-528 (599)
268 1yiq_A Quinohemoprotein alcoho 96.6 0.076 2.6E-06 35.3 13.1 78 13-94 240-346 (689)
269 3sov_A LRP-6, low-density lipo 96.5 0.051 1.8E-06 32.6 10.9 93 13-111 40-136 (318)
270 1kv9_A Type II quinohemoprotei 96.5 0.043 1.5E-06 36.3 9.2 62 28-97 438-499 (668)
271 1n7d_A LDL receptor, low-densi 96.4 0.0095 3.2E-07 39.6 6.0 93 13-112 458-555 (699)
272 3sov_A LRP-6, low-density lipo 96.3 0.077 2.6E-06 31.9 12.7 93 13-112 84-181 (318)
273 4a0p_A LRP6, LRP-6, low-densit 96.3 0.13 4.3E-06 34.0 12.4 97 9-112 39-138 (628)
274 3sbq_A Nitrous-oxide reductase 96.3 0.069 2.3E-06 35.1 8.8 66 13-86 328-408 (638)
275 2fp8_A Strictosidine synthase; 96.2 0.081 2.8E-06 31.4 11.7 93 9-110 128-242 (322)
276 3kya_A Putative phosphatase; s 96.0 0.07 2.4E-06 34.3 8.1 96 9-112 188-325 (496)
277 1tl2_A L10, protein (tachylect 96.0 0.093 3.2E-06 30.3 8.3 92 8-110 42-148 (236)
278 3q7m_A Lipoprotein YFGL, BAMB; 96.0 0.12 4.2E-06 31.2 9.9 71 18-96 52-132 (376)
279 3s94_A LRP-6, low-density lipo 95.9 0.19 6.5E-06 33.1 11.8 97 9-112 42-142 (619)
280 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.059 2E-06 32.6 7.1 27 69-95 320-346 (376)
281 3das_A Putative oxidoreductase 95.8 0.15 5.3E-06 31.2 10.1 101 9-111 34-154 (347)
282 3a9g_A Putative uncharacterize 95.7 0.17 5.7E-06 30.9 10.0 94 10-111 32-149 (354)
283 2p9w_A MAL S 1 allergenic prot 95.3 0.26 8.7E-06 30.1 11.1 94 10-112 66-200 (334)
284 3s94_A LRP-6, low-density lipo 95.2 0.37 1.3E-05 31.8 12.5 92 13-111 354-449 (619)
285 2ism_A Putative oxidoreductase 95.2 0.26 8.9E-06 29.9 11.9 92 10-110 34-148 (352)
286 2p4o_A Hypothetical protein; p 95.0 0.27 9.1E-06 29.0 13.5 72 9-90 34-108 (306)
287 4a0p_A LRP6, LRP-6, low-densit 94.8 0.52 1.8E-05 31.2 13.8 97 9-112 82-181 (628)
288 2p9w_A MAL S 1 allergenic prot 94.7 0.39 1.3E-05 29.3 12.7 99 4-110 10-150 (334)
289 3tc9_A Hypothetical hydrolase; 94.7 0.44 1.5E-05 29.9 10.3 70 9-85 228-300 (430)
290 1k3i_A Galactose oxidase precu 94.7 0.33 1.1E-05 32.0 8.2 71 13-90 191-278 (656)
291 1cru_A Protein (soluble quinop 94.6 0.49 1.7E-05 30.0 12.0 50 9-59 29-87 (454)
292 2ad6_A Methanol dehydrogenase 94.4 0.41 1.4E-05 31.2 8.1 27 18-44 312-342 (571)
293 3qqz_A Putative uncharacterize 94.4 0.4 1.4E-05 28.0 9.3 61 43-110 21-83 (255)
294 2g8s_A Glucose/sorbosone dehyd 93.8 0.63 2.2E-05 28.3 9.8 46 13-59 23-76 (353)
295 3sre_A PON1, serum paraoxonase 93.8 0.52 1.8E-05 29.0 7.2 51 9-61 223-279 (355)
296 3kya_A Putative phosphatase; s 93.6 0.64 2.2E-05 30.0 7.6 68 10-84 250-339 (496)
297 1kv9_A Type II quinohemoprotei 93.5 1.1 3.7E-05 29.9 11.7 79 12-94 234-341 (668)
298 1w6s_A Methanol dehydrogenase 93.3 1.1 3.8E-05 29.5 11.7 77 13-94 246-350 (599)
299 4hw6_A Hypothetical protein, I 93.2 0.95 3.2E-05 28.4 9.1 69 10-85 231-303 (433)
300 3s25_A Hypothetical 7-bladed b 93.1 0.68 2.3E-05 27.7 6.8 86 13-112 109-199 (302)
301 4gq2_M Nucleoporin NUP120; bet 93.0 0.88 3E-05 31.7 8.0 31 13-43 241-272 (950)
302 4gq2_M Nucleoporin NUP120; bet 92.6 0.57 1.9E-05 32.6 6.7 37 51-94 238-274 (950)
303 2wg3_C Hedgehog-interacting pr 90.9 2.1 7E-05 27.4 10.7 47 13-59 19-79 (463)
304 4a9v_A PHOX; hydrolase, beta-p 89.1 3.5 0.00012 27.4 8.5 56 51-112 478-546 (592)
305 4fhn_B Nucleoporin NUP120; pro 89.0 1.1 3.7E-05 31.8 5.6 35 8-43 239-274 (1139)
306 4fhn_B Nucleoporin NUP120; pro 89.0 0.73 2.5E-05 32.7 4.7 26 69-94 251-276 (1139)
307 3s25_A Hypothetical 7-bladed b 88.9 2.5 8.4E-05 25.3 7.1 65 14-88 59-140 (302)
308 3sre_A PON1, serum paraoxonase 88.7 2.9 9.9E-05 25.8 10.0 92 9-110 167-280 (355)
309 3zwu_A Alkaline phosphatase PH 88.1 4.2 0.00014 27.0 7.9 55 52-112 479-546 (592)
310 4a2l_A BT_4663, two-component 86.5 5.7 0.0002 26.9 12.4 95 8-110 358-465 (795)
311 2xbg_A YCF48-like protein; pho 86.5 3.7 0.00013 24.6 11.1 93 7-110 163-263 (327)
312 2ism_A Putative oxidoreductase 84.8 4.8 0.00016 24.4 8.5 53 8-61 76-147 (352)
313 3f7f_A Nucleoporin NUP120; nuc 84.7 4.9 0.00017 27.5 6.5 27 69-95 233-259 (729)
314 4a2l_A BT_4663, two-component 83.7 8.2 0.00028 26.2 12.7 92 8-110 407-511 (795)
315 1k3i_A Galactose oxidase precu 83.5 7.6 0.00026 25.7 9.5 70 13-89 248-326 (656)
316 2xbg_A YCF48-like protein; pho 83.4 5.4 0.00018 23.9 10.0 91 9-109 207-305 (327)
317 3amr_A 3-phytase; beta-propell 82.4 6.7 0.00023 24.3 9.5 79 28-112 99-195 (355)
318 3v9f_A Two-component system se 81.1 10 0.00035 25.6 12.3 92 8-110 408-508 (781)
319 3f7f_A Nucleoporin NUP120; nuc 80.1 3.3 0.00011 28.2 4.5 29 16-44 228-257 (729)
320 3pbp_A Nucleoporin NUP82; beta 79.7 9.8 0.00033 24.5 8.9 86 16-109 29-137 (452)
321 1flg_A Protein (quinoprotein e 79.7 11 0.00036 24.9 11.6 79 13-96 251-365 (582)
322 1tl2_A L10, protein (tachylect 79.5 7.1 0.00024 22.7 10.5 62 13-84 93-161 (236)
323 1cru_A Protein (soluble quinop 79.5 9.6 0.00033 24.2 9.0 52 49-107 27-87 (454)
324 2xzh_A Clathrin heavy chain 1; 79.3 9.1 0.00031 23.8 9.6 67 13-86 265-332 (365)
325 3v9f_A Two-component system se 79.1 12 0.00042 25.3 11.9 92 8-110 451-552 (781)
326 3amr_A 3-phytase; beta-propell 74.7 13 0.00043 23.1 12.5 94 7-109 128-243 (355)
327 3das_A Putative oxidoreductase 71.0 16 0.00053 22.5 8.6 53 48-107 31-90 (347)
328 1bpo_A Protein (clathrin); cla 70.9 19 0.00065 23.5 10.2 67 13-86 264-331 (494)
329 3zwu_A Alkaline phosphatase PH 69.3 23 0.00077 23.7 9.0 49 13-61 481-543 (592)
330 4a9v_A PHOX; hydrolase, beta-p 64.5 29 0.001 23.3 8.9 49 13-61 481-543 (592)
331 1bpo_A Protein (clathrin); cla 63.3 28 0.00097 22.7 11.7 89 13-111 71-165 (494)
332 3a9g_A Putative uncharacterize 62.8 23 0.0008 21.6 9.2 50 49-107 29-83 (354)
333 2xzh_A Clathrin heavy chain 1; 62.2 26 0.00089 21.9 13.1 89 13-111 72-166 (365)
334 3sbq_A Nitrous-oxide reductase 61.4 20 0.00068 24.2 4.7 53 51-109 325-390 (638)
335 1xi4_A Clathrin heavy chain; a 48.4 92 0.0031 24.0 6.6 66 13-85 264-330 (1630)
336 1xi4_A Clathrin heavy chain; a 47.5 95 0.0033 23.9 6.7 64 13-86 71-134 (1630)
337 2be1_A Serine/threonine-protei 42.7 57 0.002 20.0 7.4 66 21-91 12-81 (339)
338 3ei3_A DNA damage-binding prot 39.3 1.1E+02 0.0038 22.4 11.7 71 21-93 525-598 (1158)
339 3ii7_A Kelch-like protein 7; p 36.8 62 0.0021 18.8 7.2 63 18-89 55-130 (306)
340 2vpj_A Kelch-like protein 12; 26.4 98 0.0034 17.8 7.3 63 18-89 206-281 (301)
341 2g8s_A Glucose/sorbosone dehyd 26.4 1.1E+02 0.0039 18.5 7.7 43 19-61 289-335 (353)
342 2hc5_A ORF 99, hypothetical pr 21.3 88 0.003 16.0 2.4 19 28-46 69-87 (117)
343 4asc_A Kelch repeat and BTB do 20.9 1.4E+02 0.0047 17.4 7.0 23 17-39 147-176 (315)
344 2xn4_A Kelch-like protein 2; s 20.8 1.3E+02 0.0046 17.3 7.5 63 18-89 204-279 (302)
345 3mwp_A Nucleoprotein; structur 20.3 19 0.00065 23.3 -0.2 17 72-88 162-178 (577)
346 3d8d_A Amyloid beta A4 precurs 20.1 1.2E+02 0.004 16.4 4.6 29 20-48 56-84 (148)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.91 E-value=5.9e-23 Score=121.62 Aligned_cols=102 Identities=17% Similarity=0.178 Sum_probs=94.9
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
|++|.+.|.+ ++|+|+++.|++++ |+.|++||+.++..+..+..|..++.+++|+|++. ++++++.|+.|+
T Consensus 9 ~~~h~~~V~~-~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~s~s~d~~i~ 80 (304)
T 2ynn_A 9 FSNRSDRVKG-IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN-------WIIVGSDDFRIR 80 (304)
T ss_dssp EEEECSCEEE-EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-------EEEEEETTSEEE
T ss_pred ecCCCCceEE-EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC-------EEEEECCCCEEE
Confidence 6789999998 99999999999998 99999999999988888989999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++++..+..|. .|.+++|+|+++++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 112 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE
Confidence 99999999999998887 89999999999876
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.9e-22 Score=120.37 Aligned_cols=102 Identities=22% Similarity=0.331 Sum_probs=94.1
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+++|...|.+ ++|+|++++|++++ |+.|++||+++++....+.+|...|.+++|+|++. ++++++.|+.++
T Consensus 202 ~~~h~~~v~~-l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-------~l~s~s~D~~v~ 273 (321)
T 3ow8_A 202 LEGHAMPIRS-LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT-------HFVSSSSDKSVK 273 (321)
T ss_dssp ECCCSSCCCE-EEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCEE
T ss_pred EcccCCceeE-EEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC-------EEEEEeCCCcEE
Confidence 4678889998 99999999999999 89999999999888888999999999999999995 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++++..+..+. .|.+++|+|+++.|
T Consensus 274 iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEeCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 99999999999988776 99999999999876
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=7.4e-23 Score=129.15 Aligned_cols=100 Identities=25% Similarity=0.372 Sum_probs=90.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
|+||.+.|.+ ++|+|||++|++++ |+.|++||. +++.+..+.+|.+.|.+++|+|++. ++++++.|+.|+
T Consensus 12 L~GH~~~V~~-~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~-------~las~~~d~~i~ 82 (577)
T 2ymu_A 12 LEAHSSSVRG-VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ-------TIASASDDKTVK 82 (577)
T ss_dssp ECCCSSCEEE-EEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS-------EEEEEETTSCEE
T ss_pred ECCCCCcEEE-EEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCC-------EEEEEeCCCEEE
Confidence 6899999998 99999999999998 899999995 5777889999999999999999995 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||. +++.+..+..+. .|.+++|+|+++.+
T Consensus 83 vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 113 (577)
T 2ymu_A 83 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 113 (577)
T ss_dssp EEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEC-CCCEEEEEECCCCCEEEEEECCCCCEE
Confidence 9996 577888888776 99999999999876
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.89 E-value=2.3e-22 Score=123.35 Aligned_cols=102 Identities=25% Similarity=0.309 Sum_probs=94.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|+++.+++++ |+.|++||+.+++....+.+|...|.+++|+|++. ++++++.|+.|+
T Consensus 104 l~gh~~~V~~-~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-------~l~sgs~D~~i~ 175 (410)
T 1vyh_C 104 LSGHRSPVTR-VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-------LLASCSADMTIK 175 (410)
T ss_dssp EECCSSCEEE-EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-------EEEEEETTSCCC
T ss_pred ecccCCcEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-------EEEEEeCCCeEE
Confidence 5689999998 99999999999998 99999999999988889999999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++++..+..|. .|.+++|+|+++.+
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l 207 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI 207 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEE
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEE
Confidence 99999999988888777 99999999999876
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.88 E-value=2.8e-21 Score=114.44 Aligned_cols=103 Identities=24% Similarity=0.300 Sum_probs=94.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|++++|++++ |+.+++|+..+++....+..|...|.+++|+|++. ++++++.|+.++
T Consensus 19 ~~gh~~~v~~-~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~s~~~d~~i~ 90 (312)
T 4ery_A 19 LAGHTKAVSS-VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-------LLVSASDDKTLK 90 (312)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSEEE
T ss_pred EcccCCcEEE-EEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC-------EEEEECCCCEEE
Confidence 5789999998 99999999999998 99999999998888888889999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
+||+++++++..+..+. .+.++.|+|++++++
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 123 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 123 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 99999999999988777 899999999988763
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=116.50 Aligned_cols=101 Identities=26% Similarity=0.321 Sum_probs=92.0
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
..|...+.+ ++|+|++++|++++ |+.|++||+++++.+..+..|..+|.+++|+|++. ++++++.|+.|++
T Consensus 161 ~~~~~~v~~-~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-------~l~s~s~dg~i~i 232 (321)
T 3ow8_A 161 DTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-------LLVTASDDGYIKI 232 (321)
T ss_dssp ECSSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-------EEEEECTTSCEEE
T ss_pred cCCCceEEE-EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-------EEEEEcCCCeEEE
Confidence 456677887 99999999999998 99999999999988889999999999999999995 7789999999999
Q ss_pred EeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 82 WDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
||+++++....+..+. .|.+++|+|+++++
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence 9999999988888777 89999999999876
No 7
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.88 E-value=2.4e-21 Score=116.30 Aligned_cols=102 Identities=21% Similarity=0.336 Sum_probs=90.4
Q ss_pred ccCCCCCcCCCeEE-----cC-CCCEEEEEc-CCeEEEEeCCCC-------ceeeeccccCCceEEEEEecCCCCcccee
Q 033738 2 IRGGRSYVSSPPAF-----SN-DVKRLLVCT-SNTVSIFSTSTG-------LQISSLEGHTAPVTTVIVVPASTPATKIL 67 (112)
Q Consensus 2 ~~~h~~~v~~~~~~-----~~-~~~~l~~~~-~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 67 (112)
|++|.+.|.+ ++| ++ +++.|++++ |+.|++||+... .....+.+|...|.+++|+|++.
T Consensus 17 l~gH~~~V~~-~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~------ 89 (343)
T 2xzm_R 17 LEGHSDWVTS-IVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC------ 89 (343)
T ss_dssp EECCSSCEEE-EEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT------
T ss_pred eccchhhhhh-eeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC------
Confidence 6799999998 999 76 899999999 999999998643 34456788999999999999985
Q ss_pred EEEEeeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 68 SYCWTASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 68 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
++++++.|+.+++||+++++.+..+..|. .|.+++|+|+++++
T Consensus 90 -~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 133 (343)
T 2xzm_R 90 -FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQI 133 (343)
T ss_dssp -EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEE
T ss_pred -EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEE
Confidence 77899999999999999999999988877 99999999999876
No 8
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.2e-21 Score=114.65 Aligned_cols=102 Identities=23% Similarity=0.403 Sum_probs=94.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|++++|++++ |+.|++||+.+++.+..+..|...|.+++|+|++. ++++++.|+.++
T Consensus 28 l~~h~~~v~~-~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~s~~~dg~i~ 99 (369)
T 3zwl_B 28 LTGHERPLTQ-VKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK-------YCVTGSADYSIK 99 (369)
T ss_dssp EECCSSCEEE-EEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-------EEEEEETTTEEE
T ss_pred EEEeeceEEE-EEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC-------EEEEEeCCCeEE
Confidence 5789999998 99999999999998 99999999999988899999999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+||+.+++.+..+.....+.+++|+|+++++
T Consensus 100 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 100 LWDVSNGQCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEEEeecCCCeEEEEEccCCCEE
Confidence 9999999999988866699999999999876
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.87 E-value=2.8e-21 Score=118.53 Aligned_cols=102 Identities=24% Similarity=0.333 Sum_probs=94.6
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+++|.+.|.+ ++|+|+++.|++++ |+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++.|+.++
T Consensus 146 l~~h~~~V~~-v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~-------~l~s~s~D~~i~ 217 (410)
T 1vyh_C 146 LKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD-------HIVSASRDKTIK 217 (410)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS-------EEEEEETTSEEE
T ss_pred EeccCCcEEE-EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC-------EEEEEeCCCeEE
Confidence 5789999998 99999999999998 99999999999888899999999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||++++.++..+..+. .+.++.++|+|.++
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 99999999999998877 89999999999876
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=7.4e-21 Score=114.12 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=91.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|+++.+++++ |+.|++||++++.....+..|...|.+++|+|++. ++++++.|+.++
T Consensus 180 ~~~h~~~v~~-~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-------~l~s~s~d~~v~ 251 (340)
T 1got_B 180 FTGHTGDVMS-LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-------AFATGSDDATCR 251 (340)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCEE
T ss_pred EcCCCCceEE-EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC-------EEEEEcCCCcEE
Confidence 4679999998 99999999999998 99999999999988888999999999999999995 778999999999
Q ss_pred EEeCCCCceEEEEecCC---CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF---PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 111 (112)
+||+++++.+..+..+. .+.+++|+|+|+++
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCCCEE
Confidence 99999988877776443 79999999999876
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.87 E-value=5.2e-21 Score=113.99 Aligned_cols=102 Identities=25% Similarity=0.382 Sum_probs=90.5
Q ss_pred ccCCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCC-----CceeeeccccCCceEEEEEecCCCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTST-----GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
|++|.+.|.+ ++|+|++ +.|++++ |+.|++|++.. +..+..+.+|...|.+++|+|++. ++++++
T Consensus 13 l~gH~~~V~~-l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-------~l~s~s 84 (319)
T 3frx_A 13 LEGHNGWVTS-LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-------YALSAS 84 (319)
T ss_dssp ECCCSSCEEE-EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-------EEEEEE
T ss_pred EccccceEEE-EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-------EEEEEe
Confidence 6899999998 9999965 8899998 99999999864 234567889999999999999995 788999
Q ss_pred cCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 75 LDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
.|+.+++||+.+++.+..+..|. .|.+++|+|++.++
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 122 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI 122 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEE
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEE
Confidence 99999999999999999998877 99999999998865
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.7e-21 Score=116.51 Aligned_cols=100 Identities=19% Similarity=0.192 Sum_probs=87.7
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+|.+.|.+ ++|+|+|++|++++ |+.|++||+++++.+..+.+|...|.+++|++++. .++++++.|+.|++
T Consensus 124 ~~H~~~V~~-v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~------~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 124 YEHDDIVST-VSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD------SVFLSCSEDNRILL 196 (344)
T ss_dssp ECCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT------TEEEEEETTSCEEE
T ss_pred cCCCCCEEE-EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC------Cceeeecccccccc
Confidence 479999998 99999999999998 99999999999999999999999999999999884 25679999999999
Q ss_pred EeCCCCceEEEEecC--C-CEEEEEEcCCCc
Q 033738 82 WDFSTPELLKTIDVK--F-PIFSMVRGKKGF 109 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~--~-~v~~~~~~~~~~ 109 (112)
||++++++...+... . .+.+++|+|++.
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQS 227 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCT
T ss_pred ccccccceeeeeecceeeccceeeeecCCCC
Confidence 999999888776532 2 789999998654
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.87 E-value=1.4e-20 Score=111.47 Aligned_cols=102 Identities=27% Similarity=0.443 Sum_probs=93.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...|.+ ++|+|+++.|++++ |+.|++||+++++.+..+..|...+.+++|+|++. ++++++.|+.++
T Consensus 61 ~~~h~~~v~~-~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~s~~~d~~i~ 132 (312)
T 4ery_A 61 ISGHKLGISD-VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-------LIVSGSFDESVR 132 (312)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-------EEEEEETTSCEE
T ss_pred hccCCCceEE-EEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC-------EEEEEeCCCcEE
Confidence 4678889998 99999999999998 99999999999988888999999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+++++++..+..+. ++.++.|+|+++++
T Consensus 133 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 99999999988888776 89999999999876
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.86 E-value=8.6e-21 Score=112.02 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=86.0
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCC--CceeeeccccCCceEEEEEecC--CCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTST--GLQISSLEGHTAPVTTVIVVPA--STPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~d 76 (112)
+.+|.+.|.+ ++|+|+|++|++++ |+.|++||+.. .+.+..+.+|.+.|.+++|+++ +. ++++++.|
T Consensus 5 ~~~h~~~V~~-~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~-------~l~s~s~D 76 (297)
T 2pm7_B 5 ANAHNEMIHD-AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-------ILASCSYD 76 (297)
T ss_dssp CCSCSSCEEE-EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS-------EEEEEETT
T ss_pred ccCCcCceEE-EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC-------EEEEEcCC
Confidence 6789999998 99999999999998 99999999874 3556788899999999999863 53 77899999
Q ss_pred CcEEEEeCCCCc--eEEEEecCC-CEEEEEEcCC--CcEe
Q 033738 77 ETIKYWDFSTPE--LLKTIDVKF-PIFSMVRGKK--GFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~--~~~~ 111 (112)
+.+++||+++++ .+..+..+. .|.+++|+|+ |.++
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l 116 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPML 116 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEE
Confidence 999999998774 455566555 8999999997 6554
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.86 E-value=1.4e-20 Score=111.50 Aligned_cols=102 Identities=19% Similarity=0.297 Sum_probs=88.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...+.+ ++|+|+++.|++++ |+.|++||+++++.+..+..|...|.+++|+|++. ++++++.|+.++
T Consensus 51 ~~~~~~~v~~-~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~sgs~D~~v~ 122 (304)
T 2ynn_A 51 IQVTETPVRA-GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-------YVLSGSDDLTVK 122 (304)
T ss_dssp EECCSSCEEE-EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-------EEEEEETTSCEE
T ss_pred eeccCCcEEE-EEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC-------EEEEECCCCeEE
Confidence 4567888887 99999999999998 99999999999998899999999999999999995 778999999999
Q ss_pred EEeCCCCc-eEEEEecCC-CEEEEEEcC-CCcEe
Q 033738 81 YWDFSTPE-LLKTIDVKF-PIFSMVRGK-KGFAV 111 (112)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~-~v~~~~~~~-~~~~~ 111 (112)
+||++++. ....+..|. .|.+++|+| ++..+
T Consensus 123 lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 99998874 445666666 899999999 45544
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.86 E-value=2.9e-20 Score=112.20 Aligned_cols=101 Identities=19% Similarity=0.317 Sum_probs=91.2
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecC--CCCccceeEEEEeeecCCcE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPA--STPATKILSYCWTASLDETI 79 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~d~~i 79 (112)
.+|.+.+.+ ++|+|+++.+++++ |+.|++||+++++.+..+.+|...+.+++++|+ +. ++++++.|+.+
T Consensus 151 ~~h~~~v~~-~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~-------~l~sgs~Dg~v 222 (354)
T 2pbi_B 151 AMHTNYLSA-CSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN-------TFVSGGCDKKA 222 (354)
T ss_dssp EECSSCEEE-EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC-------EEEEEETTSCE
T ss_pred eccCCcEEE-EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC-------EEEEEeCCCeE
Confidence 468888987 99999999999998 999999999999988999999999999999885 43 67799999999
Q ss_pred EEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
++||+++++++..+..|. .|.+++|+|+++.+
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 255 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAF 255 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEE
Confidence 999999999999988776 89999999999876
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.86 E-value=1.6e-20 Score=112.91 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=86.3
Q ss_pred ccCCCC-CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCcee---eeccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 2 IRGGRS-YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQI---SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~-~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
+++|.+ .+.. ++|+|+|++|++++ |+.|++||+..+... ....+|...|.+++|+|++. ++++++.|
T Consensus 11 ~~~h~~~~v~~-l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-------~l~s~s~D 82 (345)
T 3fm0_A 11 VPAHPDSRCWF-LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-------YLASASFD 82 (345)
T ss_dssp ECCSTTSCEEE-EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-------EEEEEETT
T ss_pred ecCCCCCcEEE-EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-------EEEEEECC
Confidence 568887 7887 99999999999998 999999999876432 22357899999999999995 78899999
Q ss_pred CcEEEEeCCCC--ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 77 ETIKYWDFSTP--ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~--~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+.+++||...+ +++..+..|. .|.+++|+|+++++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 120 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL 120 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE
Confidence 99999998876 3566777776 99999999999876
No 18
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.85 E-value=7.1e-21 Score=113.26 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=81.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc--eeeeccccCCceEEEEEecC--CCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPA--STPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~d 76 (112)
+.+|.+.|.+ ++|+|+|++|++++ |+.|++||+.++. .+..+.+|.+.|.+++|+++ +. ++++++.|
T Consensus 9 ~~~H~~~V~~-v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~-------~l~s~s~D 80 (316)
T 3bg1_A 9 DTSHEDMIHD-AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN-------ILASCSYD 80 (316)
T ss_dssp -----CCEEE-EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSS-------CEEEEETT
T ss_pred cccccCeEEE-eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCC-------EEEEEECC
Confidence 5789999998 99999999999998 9999999998764 35678899999999999753 53 67799999
Q ss_pred CcEEEEeCCCCc--eEEEEecCC-CEEEEEEcCC--CcEe
Q 033738 77 ETIKYWDFSTPE--LLKTIDVKF-PIFSMVRGKK--GFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~--~~~~ 111 (112)
+.+++||++++. ....+..|. .|.+++|+|+ +.++
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~l 120 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL 120 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCE
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEE
Confidence 999999998874 455666665 8999999997 5443
No 19
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.85 E-value=3.3e-20 Score=113.20 Aligned_cols=103 Identities=25% Similarity=0.349 Sum_probs=90.6
Q ss_pred ccCCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCC-------ceeeeccccCCceEEEEEecCCCCccceeEEEEe
Q 033738 2 IRGGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTG-------LQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 72 (112)
+.+|.+.|.+ ++|+| +++.|++++ |+.|++||+.++ +.+..+.+|...|.+++|+|++. .++++
T Consensus 77 ~~~h~~~V~~-~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~------~~l~s 149 (402)
T 2aq5_A 77 VCGHTAPVLD-IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ------NVLLS 149 (402)
T ss_dssp BCCCSSCEEE-EEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT------TEEEE
T ss_pred EecCCCCEEE-EEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC------CEEEE
Confidence 5689999998 99999 899999998 999999999876 45677888999999999999973 26779
Q ss_pred eecCCcEEEEeCCCCceEEEE--ecCC-CEEEEEEcCCCcEe
Q 033738 73 ASLDETIKYWDFSTPELLKTI--DVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 73 ~~~d~~i~~~~~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~ 111 (112)
++.|+.+++||+++++.+..+ ..+. .+.+++|+|+++++
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred EcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 999999999999999998888 5555 89999999999865
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.85 E-value=3.7e-20 Score=111.31 Aligned_cols=101 Identities=19% Similarity=0.262 Sum_probs=87.1
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCC--ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTG--LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
.+|...|.+ ++|+|++++|++++ |+.+++|+...+ +....+.+|...|.+++|+|++. ++++++.|+.+
T Consensus 58 ~~h~~~v~~-~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-------~l~s~s~D~~v 129 (345)
T 3fm0_A 58 EGHQRTVRK-VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-------LLATCSRDKSV 129 (345)
T ss_dssp SSCSSCEEE-EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCE
T ss_pred cccCCcEEE-EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-------EEEEEECCCeE
Confidence 579999998 99999999999999 999999998765 34667888999999999999995 78899999999
Q ss_pred EEEeCCCCc---eEEEEecCC-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPE---LLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~---~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
++||+.++. ++..+..+. .+.+++|+|+++++
T Consensus 130 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 130 WVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 999998763 345555565 89999999999865
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.85 E-value=4.3e-20 Score=118.03 Aligned_cols=103 Identities=23% Similarity=0.321 Sum_probs=88.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecc-------ccCCceEEEEEecCCCCccceeEEEEee
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLE-------GHTAPVTTVIVVPASTPATKILSYCWTA 73 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
+.+|...|.+ ++|+|||+.|++++ |+.|++||..+++....+. +|.+.|.+++|+|++. +++++
T Consensus 186 l~~H~~~V~~-v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-------~l~s~ 257 (611)
T 1nr0_A 186 FGEHTKFVHS-VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-------KIASA 257 (611)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-------EEEEE
T ss_pred eccccCceEE-EEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-------EEEEE
Confidence 5689999998 99999999999998 9999999999888777663 6899999999999995 77899
Q ss_pred ecCCcEEEEeCCCCceEEEE-------------------------------------------ecCC-CEEEEEEcCCCc
Q 033738 74 SLDETIKYWDFSTPELLKTI-------------------------------------------DVKF-PIFSMVRGKKGF 109 (112)
Q Consensus 74 ~~d~~i~~~~~~~~~~~~~~-------------------------------------------~~~~-~v~~~~~~~~~~ 109 (112)
+.|+.+++||+.+++++..+ ..|. .|.+++|+|+|+
T Consensus 258 s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 258 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 99999999999887665443 2344 799999999998
Q ss_pred EeC
Q 033738 110 AVF 112 (112)
Q Consensus 110 ~~~ 112 (112)
+++
T Consensus 338 ~l~ 340 (611)
T 1nr0_A 338 TLF 340 (611)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.85 E-value=4.2e-20 Score=118.07 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=91.3
Q ss_pred ccCCCCCcCCCeEEcCCCC-EEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 2 IRGGRSYVSSPPAFSNDVK-RLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~-~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
+.+|...|.+ ++|+|++. .|++++ |+.+++||..+++....+.+|...|.+++|+|++. ++++++.|+.+
T Consensus 143 l~gh~~~v~~-v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-------~las~s~D~~i 214 (611)
T 1nr0_A 143 LTGQARAMNS-VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-------LFASTGGDGTI 214 (611)
T ss_dssp CCCCSSCEEE-EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCE
T ss_pred ecCCCCCceE-EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-------EEEEEECCCcE
Confidence 5789999998 99999986 588888 99999999988888888999999999999999995 78899999999
Q ss_pred EEEeCCCCceEEEEe-------cCC-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTID-------VKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~-------~~~-~v~~~~~~~~~~~~ 111 (112)
++||..+++++..+. .|. .|.+++|+|+|+++
T Consensus 215 ~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l 254 (611)
T 1nr0_A 215 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 254 (611)
T ss_dssp EEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE
T ss_pred EEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEE
Confidence 999999998888774 354 89999999999876
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.85 E-value=3.5e-20 Score=117.03 Aligned_cols=101 Identities=26% Similarity=0.412 Sum_probs=90.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...+.+ ++|+|++++|++++ |+.|++||. +++.+..+.+|...|.+++|+|++. ++++++.|+.|+
T Consensus 463 ~~~~~~~v~~-~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~-------~l~s~~~dg~v~ 533 (577)
T 2ymu_A 463 LTGHSSSVRG-VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ-------TIASASDDKTVK 533 (577)
T ss_dssp EECCSSCEEE-EEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSS-------CEEEEETTSEEE
T ss_pred EcCCCCCEEE-EEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCC-------EEEEEECcCEEE
Confidence 4678889998 99999999999998 899999996 4777888999999999999999995 777999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
+||. +++++..+..|. .|.+++|+|+|++|+
T Consensus 534 lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 534 LWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp EECT-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 9996 588888888877 999999999998763
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.85 E-value=4.2e-20 Score=112.29 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=87.1
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccC-------CceEEEEEecCCCCccceeEEEEee
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT-------APVTTVIVVPASTPATKILSYCWTA 73 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
+.+|.+.|.+ ++|+|+++.|++++ |+.|++||+++++.+..+..+. ..+.+++|+|++. +++++
T Consensus 245 ~~~h~~~v~~-v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-------~l~~g 316 (380)
T 3iz6_a 245 YHGHEGDINS-VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-------LLFAG 316 (380)
T ss_dssp ECCCSSCCCE-EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-------EEEEE
T ss_pred ECCcCCCeEE-EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-------EEEEE
Confidence 4679999998 99999999999999 9999999999987766654322 2478999999996 77899
Q ss_pred ecCCcEEEEeCCCCceEEEE----ecCC-CEEEEEEcCCCcEeC
Q 033738 74 SLDETIKYWDFSTPELLKTI----DVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 74 ~~d~~i~~~~~~~~~~~~~~----~~~~-~v~~~~~~~~~~~~~ 112 (112)
+.|+.+++||...++.+..+ ..|. .|.+++|+|+|++|+
T Consensus 317 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 317 YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 99999999999998887776 3444 899999999998763
No 25
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.85 E-value=5.3e-20 Score=109.25 Aligned_cols=102 Identities=16% Similarity=0.263 Sum_probs=87.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCC----ceeeeccccCCceEEEEEec--CCCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTG----LQISSLEGHTAPVTTVIVVP--ASTPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~ 74 (112)
+.+|.+.|.+ ++|+|++++|++++ |+.|++||+.++ +....+..|...|.+++|+| ++. ++++++
T Consensus 7 ~~gH~~~v~~-~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-------~l~s~~ 78 (351)
T 3f3f_A 7 DSGHDDLVHD-VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-------IIASAS 78 (351)
T ss_dssp ECCCSSCEEE-EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-------EEEEEE
T ss_pred CcccccceeE-EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-------EEEEEc
Confidence 6789999998 99999999999998 899999999865 34566778999999999999 464 778999
Q ss_pred cCCcEEEEeCCCC---------ceEEEEecCC-CEEEEEEcCC--CcEe
Q 033738 75 LDETIKYWDFSTP---------ELLKTIDVKF-PIFSMVRGKK--GFAV 111 (112)
Q Consensus 75 ~d~~i~~~~~~~~---------~~~~~~~~~~-~v~~~~~~~~--~~~~ 111 (112)
.|+.+++||+.++ +.+..+..+. .+.+++|+|+ ++++
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 9999999999876 4466666665 8999999999 7765
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.85 E-value=5e-20 Score=110.18 Aligned_cols=98 Identities=29% Similarity=0.382 Sum_probs=81.6
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCC-C---ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTST-G---LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
+.+|.+.|.+ ++|+|++++|++++ |+.|++||++. + +.+..+..|...|.+++|+|++. ++++++.|
T Consensus 103 ~~~h~~~V~~-v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-------~l~s~s~D 174 (330)
T 2hes_X 103 IEGHENEVKG-VAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-------LLASSSYD 174 (330)
T ss_dssp EC----CEEE-EEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-------EEEEEETT
T ss_pred EcCCCCcEEE-EEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-------EEEEEcCC
Confidence 4689999998 99999999999998 99999999943 2 34567788999999999999985 77899999
Q ss_pred CcEEEEeCCCC--ceEEEEecCC-CEEEEEEcCC
Q 033738 77 ETIKYWDFSTP--ELLKTIDVKF-PIFSMVRGKK 107 (112)
Q Consensus 77 ~~i~~~~~~~~--~~~~~~~~~~-~v~~~~~~~~ 107 (112)
+.+++||..++ +++..+..|. .|.+++|+|+
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 99999998766 5677777776 9999999998
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.85 E-value=7e-20 Score=109.90 Aligned_cols=101 Identities=22% Similarity=0.353 Sum_probs=90.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.+.+ +.|++++. +++++ |+.|++||+++++....+.+|.+.|.+++|+|++. ++++++.|+.++
T Consensus 139 ~~~h~~~v~~-~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~sg~~d~~v~ 209 (340)
T 1got_B 139 LAGHTGYLSC-CRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-------LFVSGACDASAK 209 (340)
T ss_dssp EECCSSCEEE-EEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCEE
T ss_pred ecCCCccEEE-EEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-------EEEEEeCCCcEE
Confidence 4578889987 99998876 55665 99999999999988889999999999999999985 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||++++.+...+..+. .+.+++|+|+++++
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 99999999999988776 89999999999876
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.84 E-value=3.5e-20 Score=111.66 Aligned_cols=99 Identities=18% Similarity=0.148 Sum_probs=80.9
Q ss_pred CCCCcCCCeEEcCC-CCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 5 GRSYVSSPPAFSND-VKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 5 h~~~v~~~~~~~~~-~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
|...+.+ ++|+|+ ++++++++ |+.|++||+++++.+..+.+|...|.+++|+|++. .++++++.|+.|++|
T Consensus 213 ~~~~~~~-~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~------~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 213 PGYLPTS-LAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV------PFLASLSEDCSLAVL 285 (344)
T ss_dssp -CCCEEE-EEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS------CCEEEEETTSCEEEE
T ss_pred eecccee-eeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC------eEEEEEeCCCeEEEE
Confidence 4445666 999986 46788888 89999999999988899999999999999999974 256799999999999
Q ss_pred eCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 83 DFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
|..++++.. +..|. .|.+++|+|+++.+
T Consensus 286 d~~~~~~~~-~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 286 DSSLSELFR-SQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp CTTCCEEEE-ECCCSSCEEEEEECSSSTTE
T ss_pred ECCCCcEEE-EcCCCCCEEEEEEeCCCCeE
Confidence 999887654 45555 99999999998743
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.1e-19 Score=108.78 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=79.9
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCC-------CceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTST-------GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
|...|.+ ++|+|+++.|++++ |+.|++||... .+....+.+|...|.+++|+|++. ++++++.|
T Consensus 57 h~~~v~~-v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-------~las~s~D 128 (330)
T 2hes_X 57 HKKAIRS-VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-------YLATCSRD 128 (330)
T ss_dssp CCSCEEE-EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-------EEEEEETT
T ss_pred ccCCEEE-EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-------EEEEEeCC
Confidence 8889998 99999999999998 99999999853 234566788999999999999995 78899999
Q ss_pred CcEEEEeCCCC----ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 77 ETIKYWDFSTP----ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~----~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+.+++||++.. +++..+..|. .|.+++|+|+++++
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 99999999432 4566677666 89999999999876
No 30
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.84 E-value=5.7e-20 Score=119.79 Aligned_cols=102 Identities=18% Similarity=0.182 Sum_probs=94.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+++|.+.|.+ ++|+|+++.+++++ ++.|++||..+++.+..+..|.+.|.+++|+|++. ++++++.|+.++
T Consensus 9 ~~~h~~~v~~-i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~~~~~dg~i~ 80 (814)
T 3mkq_A 9 FSNRSDRVKG-IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN-------WIIVGSDDFRIR 80 (814)
T ss_dssp EEEECSCEEE-EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-------EEEEEETTSEEE
T ss_pred eecCCCceEE-EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC-------EEEEEeCCCeEE
Confidence 5789999998 99999999999998 89999999999988889999999999999999995 778999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++.+..+..+. .+.+++|+|+++.+
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEE
Confidence 99999999999888776 89999999999875
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.84 E-value=2.1e-19 Score=107.06 Aligned_cols=102 Identities=16% Similarity=0.273 Sum_probs=90.7
Q ss_pred ccCCCCCcCCCeEEcCCC------CEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSNDV------KRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~------~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
+.+|...+.+ ++++|.+ ..+++++ |+.|++||+++.+....+.+|...|.+++|+|++. ++++++
T Consensus 144 ~~~h~~~v~~-~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~-------~l~s~~ 215 (319)
T 3frx_A 144 LLGHNDWVSQ-VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT-------LIASAG 215 (319)
T ss_dssp ECCCSSCEEE-EEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-------EEEEEE
T ss_pred EeccCCcEEE-EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-------EEEEEe
Confidence 4578888887 9999854 4788888 99999999998888888889999999999999995 788999
Q ss_pred cCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 75 LDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
.|+.|++||+.+++++..+..+..+.+++|+|++..+
T Consensus 216 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l 252 (319)
T 3frx_A 216 KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWL 252 (319)
T ss_dssp TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEE
T ss_pred CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEE
Confidence 9999999999999999999888899999999999865
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.84 E-value=1.6e-19 Score=108.99 Aligned_cols=102 Identities=12% Similarity=0.097 Sum_probs=88.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecccc--CCceEEEEEecCCCCccceeEEEEeeecCCc
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGH--TAPVTTVIVVPASTPATKILSYCWTASLDET 78 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 78 (112)
+.+|...|.+ ++|+|+++.+++++ |+.|++||++.++....+..+ ...+.+++|+|++. ++++++.|+.
T Consensus 236 ~~~h~~~v~~-v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-------~l~~g~~d~~ 307 (354)
T 2pbi_B 236 FETHESDVNS-VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-------LLFAGYNDYT 307 (354)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-------EEEEEETTSC
T ss_pred ecCCCCCeEE-EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-------EEEEEECCCc
Confidence 4678899998 99999999999998 999999999887665555432 34678999999995 7789999999
Q ss_pred EEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 79 IKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+++||+.++..+..+..|. .|.+++|+|+|++|
T Consensus 308 i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 308 INVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSCE
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEECCCCCEE
Confidence 9999999999988888776 99999999999876
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=5.4e-20 Score=110.65 Aligned_cols=103 Identities=21% Similarity=0.283 Sum_probs=88.5
Q ss_pred CccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCC--CCceeeeccccCCceEEEEEecC--CCCccceeEEEEeeec
Q 033738 1 MIRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTS--TGLQISSLEGHTAPVTTVIVVPA--STPATKILSYCWTASL 75 (112)
Q Consensus 1 ~~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~ 75 (112)
++.+|.+.|.+ ++|+|++++|++++ |+.|++||+. +++....+..|...|.+++|+++ +. ++++++.
T Consensus 6 ~~~~h~~~v~~-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-------~l~s~~~ 77 (379)
T 3jrp_A 6 IANAHNELIHD-AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-------ILASCSY 77 (379)
T ss_dssp CEEECCCCEEE-EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-------EEEEEET
T ss_pred EecCCcccEEE-EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC-------EEEEecc
Confidence 36789999998 99999999999998 9999999997 55666788889999999999876 64 7789999
Q ss_pred CCcEEEEeCCCCc--eEEEEecCC-CEEEEEEcCC--CcEe
Q 033738 76 DETIKYWDFSTPE--LLKTIDVKF-PIFSMVRGKK--GFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~--~~~~ 111 (112)
|+.+++||+.+++ .+..+..+. .+.+++|+|+ +..+
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 118 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL 118 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEE
Confidence 9999999999886 556665555 9999999999 7665
No 34
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.83 E-value=2.7e-19 Score=107.13 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=88.7
Q ss_pred ccCCCCCcCCCeEEcCC---CCEEEEEc-CCeEEEEeCCC-Ccee-eeccccCCceEEEEEecCCCCccceeEEEEeeec
Q 033738 2 IRGGRSYVSSPPAFSND---VKRLLVCT-SNTVSIFSTST-GLQI-SSLEGHTAPVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~---~~~l~~~~-~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
+.+|.+.|.+ ++|+|+ |+.|++++ |+.|++||+.+ +... ..+..|...|.+++|+|++. ++++++.
T Consensus 35 ~~~h~~~v~~-~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~s~~~ 106 (368)
T 3mmy_A 35 TSSPDDSIGC-LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS-------KVFTASC 106 (368)
T ss_dssp SSCCSSCEEE-EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS-------EEEEEET
T ss_pred ccCCCCceEE-EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC-------EEEEEcC
Confidence 6789999998 999999 59999998 89999999987 5444 67778999999999999985 7779999
Q ss_pred CCcEEEEeCCCCceEEEEecCCCEEEEEE--cCCCcEe
Q 033738 76 DETIKYWDFSTPELLKTIDVKFPIFSMVR--GKKGFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~ 111 (112)
|+.+++||+.+++.+........+.+++| +|+++++
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 144 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCV 144 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEE
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEE
Confidence 99999999999988776665559999999 8888765
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.83 E-value=3e-19 Score=108.99 Aligned_cols=96 Identities=21% Similarity=0.310 Sum_probs=87.1
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
.|.+ ++|+|+|++|++++ |+.|++||+.+++....+.+|...|.+++|+|++. ++++++.|+.+++||+++
T Consensus 125 ~v~~-v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-------~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 125 YIRS-VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-------KLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp BEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSEEEEEETTT
T ss_pred eEEE-EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC-------EEEEecCCCcEEEEECCC
Confidence 4776 99999999999998 99999999999988888999999999999999995 777999999999999999
Q ss_pred CceEEEEecCCCEEEEEEcC-CCcEe
Q 033738 87 PELLKTIDVKFPIFSMVRGK-KGFAV 111 (112)
Q Consensus 87 ~~~~~~~~~~~~v~~~~~~~-~~~~~ 111 (112)
+++...+..+..+.+++|+| +++++
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 99988888777999999999 77765
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.83 E-value=2.6e-19 Score=109.22 Aligned_cols=101 Identities=21% Similarity=0.300 Sum_probs=86.9
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccC------------------CceEEEEEecCCCCccc
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHT------------------APVTTVIVVPASTPATK 65 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~~~ 65 (112)
+|.+.|.+ ++|+|||++|++++++.+++|++.+++.+..+..+. ..|.+++|+|++.
T Consensus 62 ~h~~~V~~-v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~---- 136 (393)
T 1erj_A 62 DHTSVVCC-VKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK---- 136 (393)
T ss_dssp ECSSCCCE-EEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS----
T ss_pred CCCCEEEE-EEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC----
Confidence 58889998 999999999999988999999999887766654332 2488999999995
Q ss_pred eeEEEEeeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 66 ILSYCWTASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 66 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
++++++.|+.|++||+.+++.+..+..|. .|.+++|+|+++.++
T Consensus 137 ---~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 181 (393)
T 1erj_A 137 ---FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 181 (393)
T ss_dssp ---EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ---EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE
Confidence 77899999999999999999988888777 899999999998763
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.83 E-value=1.5e-19 Score=109.29 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=85.1
Q ss_pred CCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 4 GGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.|...+.+ ++|+|++ .++++++ |+.|++||+++++.+..+..+...|.+++|+|++. .++++++.|+.|++
T Consensus 224 ~~~~~v~~-v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~------~~lasgs~D~~i~i 296 (357)
T 4g56_B 224 ASDTIPTS-VTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSS------PFLASISEDCTVAV 296 (357)
T ss_dssp TCCSCEEE-EEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSS------CCEEEEETTSCEEE
T ss_pred cccccccc-hhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCC------CEEEEEeCCCEEEE
Confidence 35556776 9999985 6788887 89999999999988888999999999999999874 25679999999999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcC-CCcEe
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGK-KGFAV 111 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 111 (112)
||+++++++..+.....|++++|+| ++.+|
T Consensus 297 wd~~~~~~~~~~~H~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 297 LDADFSEVFRDLSHRDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp ECTTSCEEEEECCCSSCEEEEEECSSSTTEE
T ss_pred EECCCCcEeEECCCCCCEEEEEEeCCCCCEE
Confidence 9999998877665445999999998 67665
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.83 E-value=1.4e-19 Score=109.70 Aligned_cols=102 Identities=15% Similarity=0.082 Sum_probs=85.3
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CC----eEEEEeCCCCce----eeeccccCCceEEEEEecCCCCccceeEEEEee
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SN----TVSIFSTSTGLQ----ISSLEGHTAPVTTVIVVPASTPATKILSYCWTA 73 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~----~v~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
.+|...+.+ ++|+|+++.+++++ ++ .++.|++..... ...+..|...|++++|+|++. +++++
T Consensus 216 ~~~~~~v~~-v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-------~lasg 287 (365)
T 4h5i_A 216 FDKNWSLSK-INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-------LAVLA 287 (365)
T ss_dssp CCTTEEEEE-EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-------EEEEE
T ss_pred CCCCCCEEE-EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-------ceEEE
Confidence 457777887 99999999999887 54 688888765532 345667888999999999996 88899
Q ss_pred ecCCcEEEEeCCCCceEEEE-ecCC-CEEEEEEcCCCcEeC
Q 033738 74 SLDETIKYWDFSTPELLKTI-DVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 74 ~~d~~i~~~~~~~~~~~~~~-~~~~-~v~~~~~~~~~~~~~ 112 (112)
+.|+.|++||+++++++..+ ..|. +|++++|+|+|++|+
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE
Confidence 99999999999999998886 4566 999999999999873
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.83 E-value=2.8e-19 Score=115.56 Aligned_cols=102 Identities=14% Similarity=0.269 Sum_probs=89.8
Q ss_pred ccCCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCCC-----ceeeeccccCCceEEEEEecCCCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTSTG-----LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
+++|.+.|.+ ++++|++ +.|++++ |+.|++|++... .....+.+|...|.+++|+|++. ++++++
T Consensus 378 l~~H~~~V~~-v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-------~l~sgs 449 (694)
T 3dm0_A 378 MRAHTDMVTA-IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-------FALSGS 449 (694)
T ss_dssp EECCSSCEEE-EECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-------EEEEEE
T ss_pred cccCCceeEE-EEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-------EEEEEe
Confidence 5789999998 9999875 7889998 999999998753 23456788999999999999995 778999
Q ss_pred cCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 75 LDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
.|+.|++||+.++..+..+..|. .|.+++|+|+++.+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 487 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 487 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEE
Confidence 99999999999999999888877 99999999999865
No 40
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.83 E-value=5.6e-19 Score=106.03 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=84.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...|.+ ++|+|++.++++++ |+.|++||+++++.+..+.+|...|.+++|+|++. ++++++.|+.++
T Consensus 72 l~~h~~~V~~-~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-------~l~s~~~d~~i~ 143 (343)
T 2xzm_R 72 LTGHNHFVSD-LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-------QILSAGAEREIK 143 (343)
T ss_dssp ECCCSSCEEE-EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT-------EEEEEETTSCEE
T ss_pred hccCCCceEE-EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC-------EEEEEcCCCEEE
Confidence 5689999998 99999999999998 99999999999988889999999999999999995 777999999999
Q ss_pred EEeCCCCceEEEEe---cCC-CEEEEEEcCCC
Q 033738 81 YWDFSTPELLKTID---VKF-PIFSMVRGKKG 108 (112)
Q Consensus 81 ~~~~~~~~~~~~~~---~~~-~v~~~~~~~~~ 108 (112)
+||+.. ....... .+. .+.+++|+|++
T Consensus 144 ~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 144 LWNILG-ECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp EEESSS-CEEEECCTTTSCSSCEEEEEECCCC
T ss_pred EEeccC-CceeeeecccCCCceeeeeeecccc
Confidence 999983 3333332 233 79999999986
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.82 E-value=9.4e-20 Score=110.12 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=86.9
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+|.+.|.+ ++|+|+++.|++++ |+.|++||+++++.+..+..|...|.+++|++++. .++++++.|+.+++
T Consensus 136 ~~h~~~V~~-v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~------~~~~s~~~dg~v~~ 208 (357)
T 4g56_B 136 YEHDDIVKT-LSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD------TIFLSCGEDGRILL 208 (357)
T ss_dssp CCCSSCEEE-EEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS------SCEEEEETTSCEEE
T ss_pred CCCCCCEEE-EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC------ceeeeeccCCceEE
Confidence 368889998 99999999999998 99999999999998899999999999999999874 25669999999999
Q ss_pred EeCCCCceEEEEec--CC-CEEEEEEcCCCc
Q 033738 82 WDFSTPELLKTIDV--KF-PIFSMVRGKKGF 109 (112)
Q Consensus 82 ~~~~~~~~~~~~~~--~~-~v~~~~~~~~~~ 109 (112)
||++++++...+.. +. .+.+++|+|++.
T Consensus 209 wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 209 WDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp CCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred EECCCCceeeeeeeccccccccchhhhhccc
Confidence 99999887765543 22 799999999864
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.82 E-value=1.1e-19 Score=110.99 Aligned_cols=95 Identities=24% Similarity=0.325 Sum_probs=82.8
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|+++.|++++ |+.|++||+.+++.+..+..|...|.+++|+|++. ++++++.|+.++
T Consensus 135 ~~~h~~~v~~-~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~s~~~d~~v~ 206 (420)
T 3vl1_A 135 DQAHVSEITK-LKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR-------NVLSASLDGTIR 206 (420)
T ss_dssp TTSSSSCEEE-EEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT-------EEEEEETTSCEE
T ss_pred cccccCccEE-EEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC-------EEEEEcCCCcEE
Confidence 4689999998 99999999999998 89999999999888888899999999999999985 777999999999
Q ss_pred EEeCCCCceEEEEecC----CCEEEEEE
Q 033738 81 YWDFSTPELLKTIDVK----FPIFSMVR 104 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~----~~v~~~~~ 104 (112)
+||+++++.+..+..+ ..+.++.+
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEE
Confidence 9999999988888642 14555544
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.6e-19 Score=106.79 Aligned_cols=100 Identities=12% Similarity=0.075 Sum_probs=84.6
Q ss_pred CCCCCcCCCeEEcC--CCCEEEEEc-CCeEEEEeCCCCceeeecc-ccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 4 GGRSYVSSPPAFSN--DVKRLLVCT-SNTVSIFSTSTGLQISSLE-GHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 4 ~h~~~v~~~~~~~~--~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
+|.+.|.+ ++++| +++.+++++ |+.|++||+++++...... .+...+.+++|+|++. ++++++.|+.|
T Consensus 123 ~~~~~v~~-~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-------~lasg~~dg~i 194 (343)
T 3lrv_A 123 DSANEIIY-MYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-------LLALYSPDGIL 194 (343)
T ss_dssp CCSSCEEE-EECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-------EEEEECTTSCE
T ss_pred CCCCCEEE-EEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-------EEEEEcCCCEE
Confidence 45577887 99999 999999998 9999999999887765553 3455789999999995 78899999999
Q ss_pred EEEeCCCCceE-EEEec-CC-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELL-KTIDV-KF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~-~~~~~-~~-~v~~~~~~~~~~~~ 111 (112)
++||+++++.+ ..+.. |. +|.+++|+|+|.++
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 99999999887 67776 55 99999999999876
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.81 E-value=5.4e-19 Score=107.45 Aligned_cols=102 Identities=19% Similarity=0.252 Sum_probs=87.5
Q ss_pred cCCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCC-CceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 3 RGGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTST-GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
.+|...+.+ +++++ +++.+++++ |+.|++||++. ...+..+.+|.+.|.+++|+|++. ++++++.|+.+
T Consensus 202 ~~h~~~v~~-~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-------~l~s~s~D~~i 273 (380)
T 3iz6_a 202 SGHTADVLS-LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-------RFGTGSDDGTC 273 (380)
T ss_dssp SSCCSCEEE-EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-------EEEEECSSSCE
T ss_pred CCCccCeEE-EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-------eEEEEcCCCeE
Confidence 568888887 99977 789999998 99999999974 466778889999999999999995 78899999999
Q ss_pred EEEeCCCCceEEEEecCC--------CEEEEEEcCCCcEeC
Q 033738 80 KYWDFSTPELLKTIDVKF--------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~ 112 (112)
++||++++..+..+..+. .+.+++|+|+|++++
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 999999999888775432 388999999998763
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.81 E-value=2.8e-19 Score=108.39 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=70.1
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeee-ccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISS-LEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
+.+|...|.+ ++|+|||++|++|+ |+.|++||+++++.+.. +.+|...|++++|+|++. ++++++.|++|
T Consensus 265 ~~~~~~~V~~-~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~-------~laS~S~D~tv 336 (365)
T 4h5i_A 265 VTNRFKGITS-MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST-------YVASVSAANTI 336 (365)
T ss_dssp EESSCSCEEE-EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC-------EEEEEETTSEE
T ss_pred ecCCCCCeEe-EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC-------EEEEEeCCCeE
Confidence 3568888997 99999999999998 99999999999988876 478999999999999996 88899999999
Q ss_pred EEEeCCCC
Q 033738 80 KYWDFSTP 87 (112)
Q Consensus 80 ~~~~~~~~ 87 (112)
++||+...
T Consensus 337 rvw~ip~~ 344 (365)
T 4h5i_A 337 HIIKLPLN 344 (365)
T ss_dssp EEEECCTT
T ss_pred EEEEcCCC
Confidence 99998653
No 46
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=6.5e-19 Score=106.35 Aligned_cols=78 Identities=14% Similarity=0.238 Sum_probs=71.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCe-EEEEeCCCCceeeecc-c-cCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNT-VSIFSTSTGLQISSLE-G-HTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~-v~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+.+|.+.|.+ ++|+|+|++|++++ |++ |++||+++++.+..+. + |...|.+++|+|++. ++++++.|+
T Consensus 191 ~~~h~~~v~~-~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~-------~l~s~s~d~ 262 (355)
T 3vu4_A 191 IKAHTNPIKM-VRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS-------KLAVVSDKW 262 (355)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC-------EEEEEETTC
T ss_pred EEccCCceEE-EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC-------EEEEEECCC
Confidence 5689999998 99999999999999 898 9999999998888887 4 899999999999995 788999999
Q ss_pred cEEEEeCCCC
Q 033738 78 TIKYWDFSTP 87 (112)
Q Consensus 78 ~i~~~~~~~~ 87 (112)
.+++||++.+
T Consensus 263 ~v~iw~~~~~ 272 (355)
T 3vu4_A 263 TLHVFEIFND 272 (355)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEEccCC
Confidence 9999999764
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=7.6e-20 Score=110.46 Aligned_cols=100 Identities=14% Similarity=0.034 Sum_probs=81.4
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCC--ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTG--LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
.+.+.|.+ ++|+|++++|++++ |+.|++||+.++ +....+..|...|.+++|+|++. ++++++.|+.++
T Consensus 9 ~~~~~v~~-~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-------~l~s~s~d~~v~ 80 (377)
T 3dwl_C 9 ILPKPSYE-HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN-------RIVTCSQDRNAY 80 (377)
T ss_dssp ECSSCCSC-CEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC-------CEEEEETTSSEE
T ss_pred cCCCcEEE-EEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC-------EEEEEeCCCeEE
Confidence 35678998 99999999999997 999999999887 66778889999999999999985 777999999999
Q ss_pred EEeCCCCc---eEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPE---LLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~---~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.++. ....+..+. .+.+++|+|+++.+
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 115 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKF 115 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCC
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEE
Confidence 99999876 455555555 99999999998765
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=1.9e-18 Score=102.80 Aligned_cols=102 Identities=17% Similarity=0.337 Sum_probs=85.7
Q ss_pred ccCCCCCcCCCeEEcCC-CCEEEEEc-CCeEEEEeCCCCc-----eeeeccccCCceEEEEEecCCCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSND-VKRLLVCT-SNTVSIFSTSTGL-----QISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~-~~~l~~~~-~~~v~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
|+||.+.|.+ ++|+|+ +++|++++ |+.|++||+.+.+ ....+.+|...|.+++|+|++. ++++++
T Consensus 34 L~GH~~~V~~-v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-------~l~s~~ 105 (340)
T 4aow_A 34 LKGHNGWVTQ-IATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-------FALSGS 105 (340)
T ss_dssp ECCCSSCEEE-EEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-------EEEEEE
T ss_pred ECCccCCEEE-EEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-------EEEEEc
Confidence 6899999998 999998 58999998 9999999987543 3456778999999999999995 788999
Q ss_pred cCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 75 LDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
.|+.+++|+...+........+. .+....++++++.+
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 143 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccc
Confidence 99999999999887776666555 77777788777654
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.81 E-value=7.9e-19 Score=107.13 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=89.8
Q ss_pred ccCCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCCCceeeec--cccCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 2 IRGGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTSTGLQISSL--EGHTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+.+|...|.+ ++|+|++ +.|++++ |+.|++||+.+++....+ ..|...+.+++|+|++. ++++++.|+
T Consensus 127 ~~~h~~~v~~-~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~ 198 (402)
T 2aq5_A 127 LEGHTKRVGI-VAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA-------LICTSCRDK 198 (402)
T ss_dssp EECCSSCEEE-EEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS-------CEEEEETTS
T ss_pred ecCCCCeEEE-EEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC-------EEEEEecCC
Confidence 4678999998 9999998 6888888 999999999999888888 78999999999999985 677999999
Q ss_pred cEEEEeCCCCceEEEE-ecCC--CEEEEEEcCCCcEe
Q 033738 78 TIKYWDFSTPELLKTI-DVKF--PIFSMVRGKKGFAV 111 (112)
Q Consensus 78 ~i~~~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~~ 111 (112)
.+++||+++++.+..+ ..+. .+..+.|+|+++++
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 9999999999988888 4554 48899999998876
No 50
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=1.3e-18 Score=104.43 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=78.6
Q ss_pred cCCCCCcCCCeEEcC---CCCEEEEEc-CCeEEEEeCCCCceeeeccccCC---ceEEEEEecCCCCccce---------
Q 033738 3 RGGRSYVSSPPAFSN---DVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTA---PVTTVIVVPASTPATKI--------- 66 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~---~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~--------- 66 (112)
.+|...+.. ++|+| ++..|++++ |++|++||+++++.+..+.++.. .+.+++|+|++. .+
T Consensus 175 ~~~~~~v~~-l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~---~lvs~s~~~~~ 250 (356)
T 2w18_A 175 FLMPPEETI-LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL---LFIVLSHPCAK 250 (356)
T ss_dssp EECCCSSCE-EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE---EEEEEC-----
T ss_pred ccCCCceee-EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC---EEEEeccCCCc
Confidence 356666766 77877 668899988 99999999999998888875432 345556666552 11
Q ss_pred --------------------------------------eE------EEEeeecCCcEEEEeCCCCceEEEEecCC-CEE-
Q 033738 67 --------------------------------------LS------YCWTASLDETIKYWDFSTPELLKTIDVKF-PIF- 100 (112)
Q Consensus 67 --------------------------------------~~------~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~- 100 (112)
+. ++++++.|++|++||+.+++++.++..|. .+.
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 00 25677889999999999999999998765 444
Q ss_pred EEEEcCCCcEeC
Q 033738 101 SMVRGKKGFAVF 112 (112)
Q Consensus 101 ~~~~~~~~~~~~ 112 (112)
+++|+|+|++|+
T Consensus 331 ~vafSPDG~~La 342 (356)
T 2w18_A 331 FVKWSGTDSHLL 342 (356)
T ss_dssp EEEECSSSSEEE
T ss_pred EEEECCCCCEEE
Confidence 589999999874
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=1.9e-19 Score=108.75 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=80.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc---eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL---QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+.+|.+.|.+ ++|+|++++|++++ |+.|++||+.+++ ....+..|...+.+++|+|++. ++++++.|+
T Consensus 51 ~~~h~~~v~~-~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~ 122 (377)
T 3dwl_C 51 FSDHDKIVTC-VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED-------KFAVGSGAR 122 (377)
T ss_dssp BCCCSSCEEE-EEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS-------CCEEEESSS
T ss_pred EecCCceEEE-EEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC-------EEEEEecCC
Confidence 5789999998 99999999999998 9999999998876 5566778999999999999985 667999999
Q ss_pred cEEEEeCCCCc---eEEEEec-CC-CEEEEEEcCCCcEe
Q 033738 78 TIKYWDFSTPE---LLKTIDV-KF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 78 ~i~~~~~~~~~---~~~~~~~-~~-~v~~~~~~~~~~~~ 111 (112)
.+++||+++++ ....+.. +. .+.+++|+|+++++
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 99999999876 3666665 44 99999999999876
No 52
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.81 E-value=7.6e-19 Score=111.32 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=90.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccc-cCCceEEEEEec----------CCCCccceeEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEG-HTAPVTTVIVVP----------ASTPATKILSY 69 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~~~~~~~~ 69 (112)
+.+|...+.+ ++|+|++++|++++ |+.|++||+.+++.+..+.. |...+.+++|+| ++. +
T Consensus 484 ~~~~~~~v~~-~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~-------~ 555 (615)
T 1pgu_A 484 KTPLRAKPSY-ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED-------L 555 (615)
T ss_dssp SSCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC-------E
T ss_pred cCCccCceEE-EEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCC-------E
Confidence 4678889998 99999999999998 89999999999988888887 999999999999 885 7
Q ss_pred EEeeecCCcEEEEeCCCC-ceEEEEecCC-CEEEEEEcCCCc
Q 033738 70 CWTASLDETIKYWDFSTP-ELLKTIDVKF-PIFSMVRGKKGF 109 (112)
Q Consensus 70 ~~~~~~d~~i~~~~~~~~-~~~~~~~~~~-~v~~~~~~~~~~ 109 (112)
+++++.|+.|++||+.++ +++..+..|. .|.+++|+|+++
T Consensus 556 l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 556 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp EEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE
T ss_pred EEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC
Confidence 789999999999999987 6777777766 999999999997
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.81 E-value=1.6e-18 Score=104.16 Aligned_cols=103 Identities=18% Similarity=0.168 Sum_probs=88.5
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc--eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCc
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET 78 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 78 (112)
++.|.+.|.+ ++|+|+++.+++++ |+.|++||+.+++ ....+..|...+.+++|+|++. ++++++.|+.
T Consensus 4 ~~~~~~~i~~-~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~~~~~dg~ 75 (372)
T 1k8k_C 4 HSFLVEPISC-HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN-------RIVTCGTDRN 75 (372)
T ss_dssp EESCSSCCCE-EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT-------EEEEEETTSC
T ss_pred ecccCCCeEE-EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC-------EEEEEcCCCe
Confidence 4568899998 99999999999997 9999999998876 6788888999999999999985 7779999999
Q ss_pred EEEEeCCCCceEEEEe--cCC-CEEEEEEcCCCcEeC
Q 033738 79 IKYWDFSTPELLKTID--VKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~ 112 (112)
+++||+.+++...... .+. .+.+++|+|++++++
T Consensus 76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 112 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA 112 (372)
T ss_dssp EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEE
T ss_pred EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEE
Confidence 9999998887555543 333 899999999998763
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.81 E-value=2.6e-18 Score=101.91 Aligned_cols=102 Identities=22% Similarity=0.369 Sum_probs=91.8
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...+.+ ++|+|+++.+++++ |+.|++||+++++....+..|...+.+++|+|++. ++++++.|+.++
T Consensus 137 ~~~~~~~i~~-~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~dg~i~ 208 (337)
T 1gxr_A 137 LTSSAPACYA-LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-------KLWTGGLDNTVR 208 (337)
T ss_dssp EECSSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSEEE
T ss_pred cccCCCceEE-EEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-------EEEEEecCCcEE
Confidence 3467778887 99999999999998 89999999999988888888999999999999985 777999999999
Q ss_pred EEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+||+++++.+..+.....+.+++|+|+++.+
T Consensus 209 ~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECTTSSEE
T ss_pred EEECCCCceEeeecCCCceEEEEECCCCCEE
Confidence 9999999988888877799999999999876
No 55
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.81 E-value=1.3e-18 Score=106.21 Aligned_cols=104 Identities=21% Similarity=0.326 Sum_probs=91.2
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeee--cCCc
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS--LDET 78 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~d~~ 78 (112)
+.+|.+.|.+ ++|+|+++.+++++ |+.|++||+.+++....+..|...+.+++|+|++. .++++++ .|+.
T Consensus 213 ~~~~~~~v~~-~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~------~ll~~~~gs~d~~ 285 (401)
T 4aez_A 213 LQGHSSEVCG-LAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQS------NLLATGGGTMDKQ 285 (401)
T ss_dssp EECCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTST------TEEEEECCTTTCE
T ss_pred EcCCCCCeeE-EEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCC------CEEEEecCCCCCE
Confidence 4578889998 99999999999998 89999999999888888888999999999999874 2444654 7999
Q ss_pred EEEEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 79 IKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
+++||+.+++++..+..+..+.+++|+|+++.++
T Consensus 286 i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 319 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIM 319 (401)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEE
Confidence 9999999999999988777999999999998763
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.81 E-value=1.7e-18 Score=103.67 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=87.6
Q ss_pred CCCCcCCCeEEcCC----CCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEec-CCCCccceeEEEEeeecCCc
Q 033738 5 GRSYVSSPPAFSND----VKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVP-ASTPATKILSYCWTASLDET 78 (112)
Q Consensus 5 h~~~v~~~~~~~~~----~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 78 (112)
|...+.+ ++|+|+ +++|++++ |+.|++||+.+++.+..+..|...|.+++|+| ++. ++++++.|+.
T Consensus 68 ~~~~v~~-~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~l~s~~~dg~ 139 (366)
T 3k26_A 68 ADENFYT-CAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-------LLLSVSKDHA 139 (366)
T ss_dssp TTCCEEE-EEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-------EEEEEETTSC
T ss_pred CCCcEEE-EEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-------EEEEEeCCCe
Confidence 5677887 999999 66888888 89999999999988888889999999999999 664 7779999999
Q ss_pred EEEEeCCCCceEEEE---ecCC-CEEEEEEcCCCcEeC
Q 033738 79 IKYWDFSTPELLKTI---DVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 i~~~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~~ 112 (112)
|++||+++++.+..+ ..+. .+.+++|+|+++.++
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 999999999988887 3444 999999999998763
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.81 E-value=1.3e-18 Score=117.72 Aligned_cols=100 Identities=25% Similarity=0.374 Sum_probs=92.1
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|+|+++++++ |+.|++||..+++.+..+.+|...|.+++|+|++. ++++++.|+.++
T Consensus 611 ~~~h~~~v~~-~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~-------~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 611 VRPHTDAVYH-ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS-------YIATCSADKKVK 682 (1249)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSEEE
T ss_pred EecccccEEE-EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCC-------EEEEEeCCCeEE
Confidence 4689999998 99999999999998 89999999999998899999999999999999995 788999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCc
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGF 109 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 109 (112)
+||+.+++.+..+..+. .+.+++|+|+++
T Consensus 683 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 712 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSN 712 (1249)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred EEECCCCceEEEEcCCCCcEEEEEEecCCC
Confidence 99999999999998877 999999999543
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.80 E-value=3.6e-18 Score=104.92 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=86.2
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCC-Cceee-------eccccCCceEEEEEecCC-CCccceeEEEEee
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTST-GLQIS-------SLEGHTAPVTTVIVVPAS-TPATKILSYCWTA 73 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~ 73 (112)
.+|...|.+ ++|+|+++.|+++.|+.|++||++. ++... .+..|...|.+++|+|++ . +++++
T Consensus 174 ~~h~~~v~~-~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-------~l~s~ 245 (447)
T 3dw8_B 174 NAHTYHINS-ISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-------TFVYS 245 (447)
T ss_dssp SCCSSCCCE-EEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-------EEEEE
T ss_pred cCCCcceEE-EEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-------EEEEE
Confidence 579999998 9999999999998889999999984 33333 356788999999999997 4 77899
Q ss_pred ecCCcEEEEeCCCCce----EEEEecCC-------------CEEEEEEcCCCcEeC
Q 033738 74 SLDETIKYWDFSTPEL----LKTIDVKF-------------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 74 ~~d~~i~~~~~~~~~~----~~~~~~~~-------------~v~~~~~~~~~~~~~ 112 (112)
+.|+.|++||+++++. +..+..+. .+.+++|+|+|++++
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 301 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM 301 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEE
T ss_pred eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEE
Confidence 9999999999998876 67776654 799999999998763
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.79 E-value=3.7e-18 Score=104.28 Aligned_cols=93 Identities=15% Similarity=0.234 Sum_probs=84.3
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEE
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 91 (112)
..++|+++.|++++ |+.|++||+.+++....+..|...|.+++|+|++. ++++++.|+.+++||+.+++.+.
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGE-------ALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSS-------EEEEEETTSEEEEEETTTCCCCE
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCC-------EEEEEeCCCeEEEEeCCCCcCce
Confidence 57899999999998 89999999998887788889999999999999985 77899999999999999999988
Q ss_pred EEecCC-CEEEEEEcCCCcEeC
Q 033738 92 TIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 92 ~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
.+..+. .+.+++|+|+++.++
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEE
Confidence 888776 999999999998763
No 60
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=8.5e-19 Score=114.39 Aligned_cols=103 Identities=21% Similarity=0.283 Sum_probs=86.0
Q ss_pred CccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCC--CCceeeeccccCCceEEEEEecC--CCCccceeEEEEeeec
Q 033738 1 MIRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTS--TGLQISSLEGHTAPVTTVIVVPA--STPATKILSYCWTASL 75 (112)
Q Consensus 1 ~~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~ 75 (112)
++.+|.+.|.+ ++|+|+++.+++++ |+.|++||+. +++....+.+|.+.|.+++|+|+ +. ++++++.
T Consensus 4 ~l~gH~~~V~~-l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-------~l~s~s~ 75 (753)
T 3jro_A 4 IANAHNELIHD-AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-------ILASCSY 75 (753)
T ss_dssp ----CCCCEEE-ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS-------EEEEEET
T ss_pred ecccCcceeEE-EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC-------EEEEEeC
Confidence 46899999998 99999999999998 9999999987 45666788889999999999987 64 7789999
Q ss_pred CCcEEEEeCCCCc--eEEEEecCC-CEEEEEEcCC--CcEe
Q 033738 76 DETIKYWDFSTPE--LLKTIDVKF-PIFSMVRGKK--GFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~--~~~~ 111 (112)
|+.|++||+.++. .+..+..+. .+.+++|+|+ ++.+
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l 116 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL 116 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE
Confidence 9999999999886 555666555 9999999998 7655
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.79 E-value=3.4e-18 Score=110.50 Aligned_cols=101 Identities=25% Similarity=0.426 Sum_probs=90.8
Q ss_pred cCCCCCcCCCeEEcCCC--CEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 3 RGGRSYVSSPPAFSNDV--KRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~--~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
.+|...|.+ ++|+|++ ..+++++ |+.|++||+++++....+.+|.+.|.+++|+|++. ++++++.|+.|
T Consensus 514 ~~h~~~v~~-~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-------~l~sg~~Dg~i 585 (694)
T 3dm0_A 514 EGHRDWVSC-VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-------LCASGGKDGVV 585 (694)
T ss_dssp TSCSSCEEE-EEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSBC
T ss_pred CCCCCcEEE-EEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-------EEEEEeCCCeE
Confidence 468888998 9999987 5788888 99999999999888888899999999999999995 78899999999
Q ss_pred EEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
++||+++++.+..+..+..+.+++|+|++..+
T Consensus 586 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l 617 (694)
T 3dm0_A 586 LLWDLAEGKKLYSLEANSVIHALCFSPNRYWL 617 (694)
T ss_dssp EEEETTTTEEEECCBCSSCEEEEEECSSSSEE
T ss_pred EEEECCCCceEEEecCCCcEEEEEEcCCCcEE
Confidence 99999999988888777799999999998765
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.79 E-value=5.7e-18 Score=102.73 Aligned_cols=95 Identities=24% Similarity=0.349 Sum_probs=87.2
Q ss_pred CCCcCCCeEEcCCCCEEEEEc-C---CeEEEEeCCCCceeeeccc-------------cCCceEEEEEecCCCCccceeE
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT-S---NTVSIFSTSTGLQISSLEG-------------HTAPVTTVIVVPASTPATKILS 68 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~-~---~~v~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~~~ 68 (112)
...+.+ ++|+|+++.|++++ | +.|++||+.+++.+..+.. |...+.+++|+|++.
T Consensus 233 ~~~i~~-i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------- 304 (397)
T 1sq9_A 233 SNSIRS-VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE------- 304 (397)
T ss_dssp CCCEEE-EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS-------
T ss_pred CCccce-EEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC-------
Confidence 888887 99999999999998 8 9999999999888888887 899999999999995
Q ss_pred EEEeeecCCcEEEEeCCCCceEEEEe------cC---------------C-CEEEEEEcCCC
Q 033738 69 YCWTASLDETIKYWDFSTPELLKTID------VK---------------F-PIFSMVRGKKG 108 (112)
Q Consensus 69 ~~~~~~~d~~i~~~~~~~~~~~~~~~------~~---------------~-~v~~~~~~~~~ 108 (112)
++++++.|+.+++||+++++++..+. .+ . .+.+++|+|+|
T Consensus 305 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 305 TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 77899999999999999999999988 55 4 89999999998
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.79 E-value=6.2e-18 Score=101.65 Aligned_cols=101 Identities=18% Similarity=0.069 Sum_probs=89.6
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCC------------------CCceeeeccccCCceEEEEEecCCCCc
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTS------------------TGLQISSLEGHTAPVTTVIVVPASTPA 63 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 63 (112)
.+|...+.+ ++|+|+++.+++++ |+.+++||+. .++.+..+..|...+.+++|+|++.
T Consensus 139 ~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 215 (372)
T 1k8k_C 139 KPIRSTVLS-LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-- 215 (372)
T ss_dssp TTCCSCEEE-EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS--
T ss_pred cccCCCeeE-EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC--
Confidence 457888887 99999999999998 9999999953 5667778888999999999999985
Q ss_pred cceeEEEEeeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 64 TKILSYCWTASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 64 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
++++++.|+.+++||+++++++..+..+. ++.+++|+|++.++
T Consensus 216 -----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 216 -----RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLV 259 (372)
T ss_dssp -----EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEE
T ss_pred -----EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEE
Confidence 77799999999999999999999988876 99999999999865
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=4e-19 Score=112.16 Aligned_cols=102 Identities=11% Similarity=0.009 Sum_probs=85.6
Q ss_pred ccCCCCCcCCCe--EEcCCC-CEEEEEc-CCeEEEEeCCCCceeeeccccCC--ceEEEEEecCCCCccceeEEEEeeec
Q 033738 2 IRGGRSYVSSPP--AFSNDV-KRLLVCT-SNTVSIFSTSTGLQISSLEGHTA--PVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 2 ~~~h~~~v~~~~--~~~~~~-~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
+.+|...|.+ + .++|+| +.|++++ |++|++||+++++....+.+|.. .+.+++|+|++. .+++++.
T Consensus 304 ~~~H~~~V~s-v~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~-------~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILS-VSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY-------SYIYSDG 375 (524)
T ss_dssp EECSSSCEEE-EEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT-------EEEEECS
T ss_pred eecccccEEE-EEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC-------eEEEeCC
Confidence 4679999987 8 568888 8999998 99999999988776655655543 478899999985 5678999
Q ss_pred CCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 76 DETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
|+.+++||++++.++..+..|. .|.+++|+|+|+.+
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence 9999999999998877777776 99999999999865
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.79 E-value=1.4e-17 Score=98.82 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=87.8
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc--eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+|...+.+ ++|+|+++.+++++ |+.|++||+.+++ ....+..+...+.+++|+|++. ++++++.|+.++
T Consensus 95 ~~~~~v~~-~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~dg~v~ 166 (337)
T 1gxr_A 95 NRDNYIRS-CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK-------VCFSCCSDGNIA 166 (337)
T ss_dssp CTTSBEEE-EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS-------EEEEEETTSCEE
T ss_pred CCCCcEEE-EEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC-------EEEEEeCCCcEE
Confidence 67888887 99999999999998 8999999998876 4556777888999999999985 777999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+++++.+..+..+. .+.+++|+|+++.+
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEE
Confidence 99999999888888766 89999999999876
No 66
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.79 E-value=5.3e-18 Score=100.10 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=81.4
Q ss_pred ccCCCCCcCCCeEEcCC-------------CCEEEEEc-CCeEEEEeCCCCc----eeeeccccCCceEEEEEecCC--C
Q 033738 2 IRGGRSYVSSPPAFSND-------------VKRLLVCT-SNTVSIFSTSTGL----QISSLEGHTAPVTTVIVVPAS--T 61 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~-------------~~~l~~~~-~~~v~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~--~ 61 (112)
+.+|...|.+ ++|+|+ ++.|++++ |+.|++||+++++ ....+.+|...|.+++|+|++ .
T Consensus 141 ~~~h~~~v~~-~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~ 219 (297)
T 2pm7_B 141 IDAHAIGVNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (297)
T ss_dssp EECCSSCEEE-EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred eecccCccce-EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCc
Confidence 3578888887 999997 56899998 9999999987654 456778899999999999985 2
Q ss_pred CccceeEEEEeeecCCcEEEEeCCCCc--e-EEEE--ecC-CCEEEEEEcCCCcEe
Q 033738 62 PATKILSYCWTASLDETIKYWDFSTPE--L-LKTI--DVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 62 ~~~~~~~~~~~~~~d~~i~~~~~~~~~--~-~~~~--~~~-~~v~~~~~~~~~~~~ 111 (112)
.++++++.|+.+++||++++. . ...+ ..+ ..+.+++|+|+|++|
T Consensus 220 ------~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 269 (297)
T 2pm7_B 220 ------SYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL 269 (297)
T ss_dssp ------EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCE
T ss_pred ------eEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEE
Confidence 377899999999999987643 1 1222 222 389999999999876
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.78 E-value=1.6e-18 Score=106.87 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=78.6
Q ss_pred CCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCCce--eeeccccCCceEEEEEecC-CCCccceeEEEEeeecCCc
Q 033738 4 GGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTGLQ--ISSLEGHTAPVTTVIVVPA-STPATKILSYCWTASLDET 78 (112)
Q Consensus 4 ~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~d~~ 78 (112)
+|...|.+ ++|+| ++++|++|+ ||.|++||+.++.. ...+.+|.+.|.+++|+|. +. ++++++.|+.
T Consensus 117 ~~~~~V~~-l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~-------~l~s~s~D~~ 188 (435)
T 4e54_B 117 PFDRRATS-LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN-------QFYASSMEGT 188 (435)
T ss_dssp ECSSCEEE-EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT-------EEEEECSSSC
T ss_pred CCCCCEEE-EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC-------EEEEEeCCCE
Confidence 57778998 99999 567899998 99999999977643 3455679999999999984 53 6779999999
Q ss_pred EEEEeCCCCceEEEEecCC---CEEEEEEcCCCcEe
Q 033738 79 IKYWDFSTPELLKTIDVKF---PIFSMVRGKKGFAV 111 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 111 (112)
|++||++.+........+. .+.+++|+|+++++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMV 224 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEE
Confidence 9999998654433333222 57889999998876
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.78 E-value=8.2e-18 Score=113.81 Aligned_cols=104 Identities=21% Similarity=0.241 Sum_probs=93.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+++|.+.|.+ ++|+|+++++++++ |+.|++||+.+++.+..+..|...+.+++|+|++. . .++++++.|+.++
T Consensus 653 ~~~h~~~v~~-~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~---~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 653 IKAHEDEVLC-CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSN--H---LLLATGSNDFFLK 726 (1249)
T ss_dssp ECCCSSCEEE-EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS--C---CEEEEEETTSCEE
T ss_pred eccCCCCEEE-EEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCC--c---eEEEEEeCCCeEE
Confidence 4679999998 99999999999998 89999999999998999999999999999999642 1 2567999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++++..+..+. .+.+++|+|+++.+
T Consensus 727 vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred EEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 99999999999888777 99999999999876
No 69
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.78 E-value=6.7e-18 Score=106.83 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCC-----ceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTA-----PVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+|...|.+ ++|||||+.|++++ |+.|++||.+. .+..+. |.. .+.+++|||++. ++++++.||
T Consensus 83 ~~~~~V~~-vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-------~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRV-CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-------SIVVGNEDG 151 (588)
T ss_dssp SCSCCEEE-EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-------CEEEEETTS
T ss_pred CCCCcEEE-EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-------EEEEEcCCC
Confidence 45778887 99999999999998 99999999654 556666 555 499999999996 788999999
Q ss_pred cEEEEeCCCCc-------eEEEEe----cCC-CEEEEEEcCCC
Q 033738 78 TIKYWDFSTPE-------LLKTID----VKF-PIFSMVRGKKG 108 (112)
Q Consensus 78 ~i~~~~~~~~~-------~~~~~~----~~~-~v~~~~~~~~~ 108 (112)
++++||+.++. .+.++. .|. +|.+++|+|+|
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 99999999875 356653 233 99999999998
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.1e-17 Score=98.45 Aligned_cols=97 Identities=20% Similarity=0.320 Sum_probs=87.0
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
|...+.+ ++|+|++. +++++ |+.|++||+++++.+..+..|...+.+++|+|++ .+++++.|+.+++||
T Consensus 183 ~~~~i~~-~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--------~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 183 HNDVVRH-LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--------DIVSCGEDRTVRIWS 252 (313)
T ss_dssp CSSCEEE-EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--------CEEEEETTSEEEEEC
T ss_pred CcccEEE-EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC--------CEEEEecCCEEEEEE
Confidence 7778887 99999998 66776 9999999999998888999999999999999998 356899999999999
Q ss_pred CCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 84 FSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 84 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+++++.+..+..+. .+.+++|+|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 281 (313)
T 3odt_A 253 KENGSLKQVITLPAISIWSVDCMSNGDII 281 (313)
T ss_dssp TTTCCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred CCCCceeEEEeccCceEEEEEEccCCCEE
Confidence 99999999988877 99999999999754
No 71
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.78 E-value=1.3e-18 Score=106.28 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=71.1
Q ss_pred ccCCCCCcCCCeEEcC--------CCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEe
Q 033738 2 IRGGRSYVSSPPAFSN--------DVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~--------~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 72 (112)
+.||.+.|.+ ++|+| |++.|++++ |++|++||+.++.....+..|...+.+++|+|++. .++++
T Consensus 132 ~~gH~~~v~~-v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~------~~l~~ 204 (393)
T 4gq1_A 132 KSGHHNFVND-IDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNP------NQLIV 204 (393)
T ss_dssp TTSCSSCEEE-EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEE------EEEEE
T ss_pred cCCCCCceEE-EEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCC------ceEEe
Confidence 6789999998 99998 889999999 99999999988777777778889999999999874 36779
Q ss_pred eecCCcEEEEeCCCCceE
Q 033738 73 ASLDETIKYWDFSTPELL 90 (112)
Q Consensus 73 ~~~d~~i~~~~~~~~~~~ 90 (112)
++.|+.+++||+++++..
T Consensus 205 ~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp EETTSEEEEEETTCCC--
T ss_pred cCCCCEEEEEECCCCccc
Confidence 999999999999877543
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.78 E-value=8.7e-18 Score=111.53 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=87.0
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.||.+.|.+ ++|+|++++|++|+ |+.|++|+....+....+ .+...|.+++|+| +. ++++++.|+.|++
T Consensus 14 ~gh~~~V~~-lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~-------~L~S~s~D~~v~l 83 (902)
T 2oaj_A 14 YGMSSKPIA-AAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GI-------YLVVINAKDTVYV 83 (902)
T ss_dssp EECSSCEEE-EEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TT-------EEEEEETTCEEEE
T ss_pred cCCCCCcEE-EEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CC-------EEEEEECcCeEEE
Confidence 478899998 99999999999998 999999998876654444 3678899999999 64 6779999999999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
||+.+++++..+..+..|.+++|+|++++++
T Consensus 84 Wd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~ 114 (902)
T 2oaj_A 84 LSLYSQKVLTTVFVPGKITSIDTDASLDWML 114 (902)
T ss_dssp EETTTCSEEEEEECSSCEEEEECCTTCSEEE
T ss_pred EECCCCcEEEEEcCCCCEEEEEECCCCCEEE
Confidence 9999999988887666999999999998763
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.78 E-value=1.1e-17 Score=105.94 Aligned_cols=101 Identities=16% Similarity=0.280 Sum_probs=88.5
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCC----ceeeeccccCCc-eEEEEEec--CCCCccceeEEEEeeec
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTG----LQISSLEGHTAP-VTTVIVVP--ASTPATKILSYCWTASL 75 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~~~~~~~ 75 (112)
..|.+.+.+ ++|+|+|+++++++++.+++||+.++ +....+.+|... |.+++|+| ++. ++++++.
T Consensus 15 ~~~~~~v~~-~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-------~l~s~~~ 86 (615)
T 1pgu_A 15 STQRNFTTH-LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-------YLCSGDE 86 (615)
T ss_dssp CCCTTCCCC-CEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-------EEEEEET
T ss_pred CCccCceeE-EEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC-------EEEEecC
Confidence 357888998 99999999999999999999999988 778889999999 99999999 985 7889999
Q ss_pred CCcEEEEeCCCC--------ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 76 DETIKYWDFSTP--------ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~--------~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
|+.+++||+.++ .....+..+. .+.+++|+|+++++
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 131 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEE
Confidence 999999999754 5566666555 99999999999876
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.5e-17 Score=101.20 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=91.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...+.+ ++|+|+++.|++++ |+.|++||+.+++....+..|...+.+++|+|++ ++++++.|+.++
T Consensus 243 ~~~~~~~i~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--------~l~~~~~d~~i~ 313 (425)
T 1r5m_A 243 LIGHHGPISV-LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--------KVISCSMDGSVR 313 (425)
T ss_dssp ECCCSSCEEE-EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--------EEEEEETTSEEE
T ss_pred eccCCCceEE-EEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--------EEEEEeCCCcEE
Confidence 3568888887 99999999999998 8999999999888888888899999999999987 667999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
+||+++++.+..+..+. .+.+++|+|++++++
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEE
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEE
Confidence 99999999988888766 999999999998763
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.77 E-value=2.3e-17 Score=100.09 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=88.8
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccc---c---CCceEEEEEecCCCCccceeEEEEeeec
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEG---H---TAPVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
..|...+.+ ++|+|++ .+++++ |+.|++||+++++.+..+.. | ...+.+++|+|++. ++++++.
T Consensus 183 ~~~~~~i~~-~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-------~l~~~~~ 253 (397)
T 1sq9_A 183 MTPSQFATS-VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-------LLAIAHD 253 (397)
T ss_dssp SSSCCCCCE-EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT-------EEEEEEE
T ss_pred cCCCCCceE-EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC-------EEEEEec
Confidence 347788887 9999999 999998 89999999999888888887 8 89999999999985 7779999
Q ss_pred C---CcEEEEeCCCCceEEEEec-------------CC-CEEEEEEcCCCcEeC
Q 033738 76 D---ETIKYWDFSTPELLKTIDV-------------KF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 76 d---~~i~~~~~~~~~~~~~~~~-------------~~-~v~~~~~~~~~~~~~ 112 (112)
| +.+++||+++++.+..+.. +. .+.+++|+|++++++
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 307 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 307 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE
Confidence 9 9999999999999888876 55 899999999998763
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4e-18 Score=113.10 Aligned_cols=101 Identities=10% Similarity=0.116 Sum_probs=82.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCcee--eec----c-----ccCCceEEEEEecCCCCccceeEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQI--SSL----E-----GHTAPVTTVIVVPASTPATKILSY 69 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~--~~~----~-----~~~~~v~~~~~~~~~~~~~~~~~~ 69 (112)
+.||...+.. ++|+|+++.|++++ |++|++||+.++... ..+ . +|...|.+++|+|++. +
T Consensus 431 l~G~~~~v~s-v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-------~ 502 (902)
T 2oaj_A 431 LKGGVRTKRQ-KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-------E 502 (902)
T ss_dssp CCCSBCCCCC-CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-------E
T ss_pred ccCCcCCCCc-ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-------e
Confidence 5778888886 99999999999999 999999999876421 111 1 6788999999999996 7
Q ss_pred EEeeecCCcEEEEeCCCCc---------------------------------------------eEEEEecCC-CEEEEE
Q 033738 70 CWTASLDETIKYWDFSTPE---------------------------------------------LLKTIDVKF-PIFSMV 103 (112)
Q Consensus 70 ~~~~~~d~~i~~~~~~~~~---------------------------------------------~~~~~~~~~-~v~~~~ 103 (112)
+++++.|++|++||+.+++ ++..+..|. .|++++
T Consensus 503 LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sva 582 (902)
T 2oaj_A 503 LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAIN 582 (902)
T ss_dssp EEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEE
T ss_pred EEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEE
Confidence 8899999999999987652 355666665 999999
Q ss_pred EcCCCcEe
Q 033738 104 RGKKGFAV 111 (112)
Q Consensus 104 ~~~~~~~~ 111 (112)
|+|+| +|
T Consensus 583 fSpdG-~l 589 (902)
T 2oaj_A 583 NSNIG-FV 589 (902)
T ss_dssp ECBTS-EE
T ss_pred ecCCc-EE
Confidence 99999 65
No 77
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.3e-17 Score=103.18 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=87.8
Q ss_pred ccCCCCCcCCCeEEcCC---CCEEEEEc-CCeEEEEeCCCCceeee-ccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSND---VKRLLVCT-SNTVSIFSTSTGLQISS-LEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~---~~~l~~~~-~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
+.+|...|.+ ++|+|+ +++|++++ |+.|++||+.+++.+.. +.+|...|.+++|+ ++. ++++++.|
T Consensus 191 ~~~h~~~v~~-~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~-------~l~s~~~d 261 (450)
T 2vdu_B 191 ILGHVSMLTD-VHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY-------LLLSAGGD 261 (450)
T ss_dssp SEECSSCEEE-EEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT-------EEEEEESS
T ss_pred eecccCceEE-EEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC-------EEEEEeCC
Confidence 4678889998 999999 88999998 99999999998877766 56899999999999 885 77799999
Q ss_pred CcEEEEeCCCCceEEEEecC--------------------------CCEEEEEEcCCCcEeC
Q 033738 77 ETIKYWDFSTPELLKTIDVK--------------------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~~~--------------------------~~v~~~~~~~~~~~~~ 112 (112)
+.|++||+.+++++..+..+ ..+..+.|+|++++++
T Consensus 262 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 323 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA 323 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence 99999999999988777521 2688999999998764
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.77 E-value=6.2e-18 Score=110.30 Aligned_cols=102 Identities=19% Similarity=0.311 Sum_probs=90.0
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++|+|+++.|++++ |+.|++||+.+++.+..+..|...+.+++|+|++. ++++++.|+.++
T Consensus 51 ~~~~~~~v~~-~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~~~~~dg~i~ 122 (814)
T 3mkq_A 51 IQVTETPVRA-GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-------YVLSGSDDLTVK 122 (814)
T ss_dssp EECCSSCEEE-EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-------EEEEEETTSEEE
T ss_pred EecCCCcEEE-EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC-------EEEEEcCCCEEE
Confidence 4578899998 99999999999998 89999999999988888999999999999999995 677999999999
Q ss_pred EEeCCCC-ceEEEEecCC-CEEEEEEcC-CCcEe
Q 033738 81 YWDFSTP-ELLKTIDVKF-PIFSMVRGK-KGFAV 111 (112)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~-~v~~~~~~~-~~~~~ 111 (112)
+||+.++ .....+..+. .+.+++|+| +++.+
T Consensus 123 vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 9999887 5666666665 899999999 66654
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=6.4e-18 Score=101.40 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=78.8
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCcee-eeccc-cCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQI-SSLEG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
|...+.+ ++|+|+|+++++|+ |+.|++||+++++.. ..+.. |.++|.+++|+|++. ++++++ ++.+++
T Consensus 169 ~~~~i~~-~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-------~l~s~~-~~~v~i 239 (343)
T 3lrv_A 169 SDVEYSS-GVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-------WMVVEC-DQTVVC 239 (343)
T ss_dssp SSCCCCE-EEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-------EEEEEE-SSBEEE
T ss_pred CCCceEE-EEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-------EEEEEe-CCeEEE
Confidence 4456777 99999999999998 999999999998766 67777 899999999999995 677888 459999
Q ss_pred EeCCCCceEEEEec---CC-CE--EEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDV---KF-PI--FSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~---~~-~v--~~~~~~~~~~~~~ 112 (112)
||+++++.+..+.. +. .+ .+++|+|+|++++
T Consensus 240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred EEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 99998876544332 22 33 4699999998763
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.77 E-value=1.8e-17 Score=100.37 Aligned_cols=101 Identities=10% Similarity=0.098 Sum_probs=83.8
Q ss_pred ccCCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCCCceeeecc--ccCCceEEEEEec-CCCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVP-ASTPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d 76 (112)
+.+|.+.|.+ ++|+|++ +.|++++ |+.|++||+.+++....+. +|...|.+++|+| ++ .++++++.|
T Consensus 69 ~~~h~~~v~~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-------~~l~s~~~d 140 (383)
T 3ei3_B 69 ASPFDRRVTS-LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-------NQLFVSSIR 140 (383)
T ss_dssp ECCCSSCEEE-EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-------EEEEEEETT
T ss_pred ccCCCCCEEE-EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-------CEEEEEeCC
Confidence 4679999998 9999999 8999998 9999999999876665554 5889999999999 45 377799999
Q ss_pred CcEEEEeCCCCceEEEEecC----CCEEEEEEcCCCcEe
Q 033738 77 ETIKYWDFSTPELLKTIDVK----FPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~ 111 (112)
+.+++||+.. ..+..+..+ ..+.+++|+|+++++
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l 178 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQML 178 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEE
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEE
Confidence 9999999985 444555432 369999999999876
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.8e-17 Score=97.88 Aligned_cols=96 Identities=20% Similarity=0.218 Sum_probs=87.0
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCC-CceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTST-GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
.+.+ ++|+|+++.+++++ |+.|++||+.+ .+....+..|...+.+++|+|++. ++++++.|+.+++||++
T Consensus 177 ~~~~-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 177 AATV-AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-------YFITSSRDTNSFLVDVS 248 (369)
T ss_dssp CEEE-EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-------EEEEEETTSEEEEEETT
T ss_pred ceeE-EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-------EEEEecCCceEEEEECC
Confidence 7776 99999999999998 89999999998 677788888999999999999985 77799999999999999
Q ss_pred CCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 86 TPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+++.+..+.....+..++|+|+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (369)
T 3zwl_B 249 TLQVLKKYETDCPLNTAVITPLKEFI 274 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEE
T ss_pred CCceeeeecCCCCceeEEecCCCceE
Confidence 99999988877799999999999876
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.76 E-value=3.1e-17 Score=99.36 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=84.9
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
|...+.+ ++|+|+++.+++++ |+.|++||++ ++.+..+..|...|.+++|+|++. .++++++.|+.+++||
T Consensus 162 ~~~~v~~-~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~------~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 162 WDYWYCC-VDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCD------WLMATSSVDATVKLWD 233 (383)
T ss_dssp SSCCEEE-EEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCT------TEEEEEETTSEEEEEE
T ss_pred CCCCeEE-EEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCC------CEEEEEeCCCEEEEEe
Confidence 4567887 99999999999998 8999999994 667888888999999999999984 2567999999999999
Q ss_pred CCC----CceEEEEecCCCEEEEEEcC-CCcEe
Q 033738 84 FST----PELLKTIDVKFPIFSMVRGK-KGFAV 111 (112)
Q Consensus 84 ~~~----~~~~~~~~~~~~v~~~~~~~-~~~~~ 111 (112)
+++ +.++..+.....+.+++|+| +++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 266 (383)
T 3ei3_B 234 LRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL 266 (383)
T ss_dssp GGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE
T ss_pred CCCCCcccceEEEecCCCceEEEEEcCCCCCEE
Confidence 987 66777775555999999999 98876
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.76 E-value=1.2e-17 Score=99.43 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=81.2
Q ss_pred ccCCCCCcCCCeEEcCC-----------------CCEEEEEc-CCeEEEEeCCCC---ceeeeccccCCceEEEEEecCC
Q 033738 2 IRGGRSYVSSPPAFSND-----------------VKRLLVCT-SNTVSIFSTSTG---LQISSLEGHTAPVTTVIVVPAS 60 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~-----------------~~~l~~~~-~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~ 60 (112)
+.+|...+.+ ++|+|+ ++.|++++ |+.|++||++.. +....+.+|...|.+++|+|++
T Consensus 146 ~~~h~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 146 NNAHTIGCNA-VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp TTSSSSCBCC-CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred eccccCCcce-EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence 3578888887 999997 46888888 999999999754 3556788899999999999985
Q ss_pred CCccceeEEEEeeecCCcEEEEeCCCC---c-eEEEEecC-CCEEEEEEcCCCcEe
Q 033738 61 TPATKILSYCWTASLDETIKYWDFSTP---E-LLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 61 ~~~~~~~~~~~~~~~d~~i~~~~~~~~---~-~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
.... .++++++.|+.+++|++.+. . ....+..+ ..+.+++|+|+|++|
T Consensus 225 ~~~~---~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 225 GLPT---STIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANIL 277 (316)
T ss_dssp SCSC---CEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCE
T ss_pred CCCC---ceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEE
Confidence 1000 16779999999999998762 1 12233333 489999999999865
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.76 E-value=1.3e-16 Score=94.95 Aligned_cols=102 Identities=21% Similarity=0.298 Sum_probs=89.7
Q ss_pred ccCCCCCcCCCeEEcCCC--CEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCc
Q 033738 2 IRGGRSYVSSPPAFSNDV--KRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET 78 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~--~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 78 (112)
+.+|...+.. +++++++ ..+++++ |+.|++||+++++....+.+|.+.|.+++|+|++. ++++++.|+.
T Consensus 167 ~~~~~~~v~~-~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-------~l~s~s~Dg~ 238 (340)
T 4aow_A 167 DESHSEWVSC-VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-------LCASGGKDGQ 238 (340)
T ss_dssp SSSCSSCEEE-EEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTCE
T ss_pred eccccCcccc-eEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-------EEEEEeCCCe
Confidence 3567888887 8998875 4667777 89999999999988888999999999999999995 7789999999
Q ss_pred EEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 79 IKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+++||+++++.+..+..+..+.++.|+|++..+
T Consensus 239 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 239 AMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL 271 (340)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSSSEE
T ss_pred EEEEEeccCceeeeecCCceEEeeecCCCCcee
Confidence 999999999999999888899999999988654
No 85
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.2e-17 Score=99.26 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=79.7
Q ss_pred CCCCcCCCeEEcCCCC-EEEEEc-CCeEEEEeC----CCCc------eeeeccc----------cCCceEEEEEecCCCC
Q 033738 5 GRSYVSSPPAFSNDVK-RLLVCT-SNTVSIFST----STGL------QISSLEG----------HTAPVTTVIVVPASTP 62 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~-~l~~~~-~~~v~~~~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~ 62 (112)
|.+.|.+ ++|+|+++ +|++++ |+.|++|++ .+++ ....+.. |.+.|.+++|+|++.
T Consensus 44 ~~~~v~~-~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 121 (425)
T 1r5m_A 44 KLDNIVS-STWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN- 121 (425)
T ss_dssp ECSCCSE-EEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS-
T ss_pred ccCceEE-EEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC-
Confidence 5588998 99999999 999998 899999999 7776 3333333 567899999999985
Q ss_pred ccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 63 ATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 63 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
++++++.|+.+++|| .++..+..+..+. .+.+++|+|++++++
T Consensus 122 ------~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (425)
T 1r5m_A 122 ------SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHII 165 (425)
T ss_dssp ------EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred ------EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEE
Confidence 778999999999999 5677888887766 999999999998763
No 86
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.76 E-value=4.9e-18 Score=105.13 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=79.5
Q ss_pred CCCcCCCeEEcCCCCEEE----EEc-CCeEEEEeCCCC--------c---eeeeccccCCceEEEEEecCCCCccceeEE
Q 033738 6 RSYVSSPPAFSNDVKRLL----VCT-SNTVSIFSTSTG--------L---QISSLEGHTAPVTTVIVVPASTPATKILSY 69 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~----~~~-~~~v~~~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 69 (112)
...|.+ ++|+|+|++|+ +++ |+.|++||+.++ + ....+.+|...|.+++|+|+.. .+
T Consensus 92 ~~~v~~-l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~------~~ 164 (434)
T 2oit_A 92 KFPIHH-LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP------SM 164 (434)
T ss_dssp SSCEEE-EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT------TE
T ss_pred CCcccE-EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC------CE
Confidence 345777 99999999999 666 899999998654 1 1345566889999999999832 26
Q ss_pred EEeeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 70 CWTASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 70 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+++++.|+.+++||++++..+.....+. .+.+++|+|+|+++
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~l 207 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQL 207 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCE
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEE
Confidence 7799999999999999887665555544 89999999999876
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.76 E-value=2.9e-17 Score=101.20 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=85.5
Q ss_pred ccCCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCC---ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTG---LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
+.+|...|.+ ++|+| ++..+++++ |+.|++||++++ +....+..|...+.+++|+|++. .++++++.|
T Consensus 227 ~~~h~~~v~~-v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~------~~l~tg~~d 299 (430)
T 2xyi_A 227 FTGHTAVVED-VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE------FILATGSAD 299 (430)
T ss_dssp ECCCSSCEEE-EEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCT------TEEEEEETT
T ss_pred ecCCCCCEee-eEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCC------CEEEEEeCC
Confidence 3578888998 99999 668888887 899999999876 45566778899999999999885 256799999
Q ss_pred CcEEEEeCCC-CceEEEEecCC-CEEEEEEcCCCcE
Q 033738 77 ETIKYWDFST-PELLKTIDVKF-PIFSMVRGKKGFA 110 (112)
Q Consensus 77 ~~i~~~~~~~-~~~~~~~~~~~-~v~~~~~~~~~~~ 110 (112)
+.|++||+++ +.++..+..+. .+.+++|+|+++.
T Consensus 300 g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTT
T ss_pred CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCC
Confidence 9999999997 56677777666 9999999999864
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.75 E-value=5.7e-17 Score=100.31 Aligned_cols=100 Identities=12% Similarity=0.164 Sum_probs=85.6
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.+.. ++.++++.+++++ |+.|++||+.+++.+..+.+|.+.|.+++|+|++ ++++++.|+.++
T Consensus 117 l~~h~~~v~~--~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--------~l~s~s~dg~i~ 186 (464)
T 3v7d_B 117 LRGHMTSVIT--CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--------ILVSGSTDRTVR 186 (464)
T ss_dssp EECCSSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--------EEEEEETTSCEE
T ss_pred EcCCCCCcEE--EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--------EEEEEeCCCCEE
Confidence 5678887653 4555778999998 9999999999999889999999999999999887 677999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcC--CCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGK--KGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~ 111 (112)
+||+++++++..+..+. .+.+++|++ +++++
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEE
Confidence 99999999999988776 999999984 55544
No 89
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=3.9e-17 Score=101.12 Aligned_cols=101 Identities=11% Similarity=0.117 Sum_probs=82.4
Q ss_pred ccCCCCCcCCCeEEcCC-CCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 2 IRGGRSYVSSPPAFSND-VKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~-~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
+.+|...|.+ ++|+|+ ++.|++++ |+.|++||++++........|...+.+++|+|++. ++++++.|+.+
T Consensus 145 ~~~h~~~V~~-v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~-------~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVID-MKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGK-------QLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEE-EEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSS-------CEEEEETTSCE
T ss_pred cCCCCCceEE-EEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCC-------EEEEEcCCCcE
Confidence 4568889998 999998 78899888 99999999998866555566788999999999995 77799999999
Q ss_pred EEEeCCCCceEEEEecC-------C-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTIDVK-------F-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-------~-~v~~~~~~~~~~~~ 111 (112)
++||.+ +.....+..+ . .+.++.|++++.++
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 5555554322 1 68899999887654
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.74 E-value=3e-17 Score=101.25 Aligned_cols=100 Identities=7% Similarity=-0.027 Sum_probs=79.7
Q ss_pred ccCCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 2 IRGGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+.+|.+.|.+ ++|+| +++.|++++ |++|++||++++....... .+...+.+++|+|++. ++++++.|+
T Consensus 160 ~~gH~~~V~~-l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~g~~dg 231 (435)
T 4e54_B 160 GIGAGGSITG-LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSR-------MVVTGDNVG 231 (435)
T ss_dssp CCSSSCCCCE-EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTT-------EEEEECSSS
T ss_pred ccCCCCCEEE-EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCC-------EEEEEeCCC
Confidence 4579999998 99998 689999999 9999999998654322222 2334567899999995 778999999
Q ss_pred cEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcE
Q 033738 78 TIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFA 110 (112)
Q Consensus 78 ~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 110 (112)
.|++||++ ++.+..+..|. .|.+++|+|+++.
T Consensus 232 ~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 232 NVILLNMD-GKELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp BEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSS
T ss_pred cEeeeccC-cceeEEEecccceEEeeeecCCCce
Confidence 99999987 45556666666 9999999999864
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.74 E-value=1.1e-16 Score=98.62 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=83.5
Q ss_pred ccCCCCCcCCCeEEcCCCC-EEEEEc-CCeEEEEeCCCCce-------eeeccccCCceEEEEEecCCCCccceeEEEEe
Q 033738 2 IRGGRSYVSSPPAFSNDVK-RLLVCT-SNTVSIFSTSTGLQ-------ISSLEGHTAPVTTVIVVPASTPATKILSYCWT 72 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~-~l~~~~-~~~v~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 72 (112)
+.+|...+.+ ++|+|++. .|++++ |+.|++|++..+.. ...+..|...|.+++|+|++. .++++
T Consensus 177 ~~~h~~~v~~-l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~------~~l~s 249 (430)
T 2xyi_A 177 LRGHQKEGYG-LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE------SLFGS 249 (430)
T ss_dssp EECCSSCCCC-EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT------TEEEE
T ss_pred ecCCCCCeEE-EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC------CEEEE
Confidence 4578889998 99999998 899998 89999999987321 345567889999999999543 26779
Q ss_pred eecCCcEEEEeCCCC---ceEEEEecCC-CEEEEEEcCCCcE
Q 033738 73 ASLDETIKYWDFSTP---ELLKTIDVKF-PIFSMVRGKKGFA 110 (112)
Q Consensus 73 ~~~d~~i~~~~~~~~---~~~~~~~~~~-~v~~~~~~~~~~~ 110 (112)
++.|+.|++||++++ ..+..+..+. .+.+++|+|+++.
T Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 291 (430)
T 2xyi_A 250 VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF 291 (430)
T ss_dssp EETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT
T ss_pred EeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC
Confidence 999999999999976 4666666665 9999999999874
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.1e-17 Score=99.94 Aligned_cols=100 Identities=15% Similarity=0.208 Sum_probs=85.5
Q ss_pred CCCCCcCCCeEEcCCC-CEEEEEc-CC---eEEEEeCCCC-ceeeecc-ccCCceEEEEEec-CCCCccceeEEEEeeec
Q 033738 4 GGRSYVSSPPAFSNDV-KRLLVCT-SN---TVSIFSTSTG-LQISSLE-GHTAPVTTVIVVP-ASTPATKILSYCWTASL 75 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~-~~l~~~~-~~---~v~~~~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~ 75 (112)
+|...+.+ ++|+|++ ..+++++ ++ .|++||++++ .....+. .|...+.+++|+| ++. ++++++.
T Consensus 212 ~~~~~v~~-~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-------~l~s~~~ 283 (416)
T 2pm9_A 212 GIKQQLSV-VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-------LLLSSGR 283 (416)
T ss_dssp CCCCCEEE-EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-------CEEEEES
T ss_pred ccCCceEE-EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-------eEEEEeC
Confidence 34778887 9999997 6788887 77 9999999886 5566777 7999999999999 664 6779999
Q ss_pred CCcEEEEeCCCCceEEEEecCC-CEEEEEEcCCC-cEe
Q 033738 76 DETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKG-FAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~-~~~ 111 (112)
|+.+++||+++++.+..+..+. .+.+++|+|++ .++
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEE
Confidence 9999999999999999988776 89999999998 554
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.74 E-value=4.5e-17 Score=97.04 Aligned_cols=100 Identities=9% Similarity=0.164 Sum_probs=83.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc---eeeeccccCCceEEEEEecCCCCccceeE-EEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL---QISSLEGHTAPVTTVIVVPASTPATKILS-YCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~d 76 (112)
..+|.+.|.+ ++|+|+++.|++++ |+.|++|++.++. ....+..|...+.+++|+|++ . ++++++.|
T Consensus 7 ~~~h~~~v~~-~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~l~~~~~d 78 (342)
T 1yfq_A 7 EQAPKDYISD-IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-------DLQIYVGTVQ 78 (342)
T ss_dssp SSCCSSCEEE-EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-------SEEEEEEETT
T ss_pred ccCCCCcEEE-EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-------CcEEEEEcCC
Confidence 4679999998 99999999999998 9999999998765 244555788999999999997 4 56699999
Q ss_pred CcEEEEeC-CCCceEEEEec--CC-CEEEEEEcCCCcEe
Q 033738 77 ETIKYWDF-STPELLKTIDV--KF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~-~~~~~~~~~~~--~~-~v~~~~~~~~~~~~ 111 (112)
+.+++||+ .+++. ..+.. +. .+.+++|+| ++.+
T Consensus 79 g~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l 115 (342)
T 1yfq_A 79 GEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKL 115 (342)
T ss_dssp SCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEE
T ss_pred CeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEE
Confidence 99999999 87755 55555 55 999999999 7655
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.74 E-value=1e-16 Score=97.15 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=84.7
Q ss_pred ccCCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCCceeeecc-------------ccCCceEEEEEecCCCCccce
Q 033738 2 IRGGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTGLQISSLE-------------GHTAPVTTVIVVPASTPATKI 66 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~ 66 (112)
+.+|.+.|.+ ++|+| +++.|++++ |+.|++||+.++.....+. .|...|.+++|+|++.
T Consensus 39 ~~~h~~~v~~-~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----- 112 (408)
T 4a11_B 39 ERIHGGGINT-LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT----- 112 (408)
T ss_dssp CCCCSSCEEE-EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT-----
T ss_pred eeccCCcEEE-EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC-----
Confidence 5679999998 99999 999999998 9999999998765443332 4888999999999442
Q ss_pred eEEEEeeecCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCc
Q 033738 67 LSYCWTASLDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGF 109 (112)
Q Consensus 67 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 109 (112)
.++++++.|+.+++||+.+++....+.....+.++.++|.+.
T Consensus 113 -~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 113 -GMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVST 154 (408)
T ss_dssp -TCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCS
T ss_pred -cEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCC
Confidence 266799999999999999999988888777899999988543
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.74 E-value=7e-18 Score=106.55 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=81.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCc-eeeeccccCCceEEE--EEecCC-CCccceeEEEEeeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGL-QISSLEGHTAPVTTV--IVVPAS-TPATKILSYCWTASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~~~~~~~~~~~~~~d 76 (112)
+.+|...|.+ ++|++++ .|++|+ |++|++||++++. ....+..|...|.++ .++|++ . ++++++.|
T Consensus 262 l~~h~~~v~s-v~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~-------~laS~S~D 332 (524)
T 2j04_B 262 LSLADSLITT-FDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT-------VVSTVAVD 332 (524)
T ss_dssp ECCTTTCEEE-EEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC-------EEEEEETT
T ss_pred EEcCCCCEEE-EEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe-------EEEEeccC
Confidence 3578888987 9999865 788888 9999999998764 345578899999999 567776 4 77899999
Q ss_pred CcEEEEeCCCCceEEEEecCC---CEEEEEEcCCCcEe
Q 033738 77 ETIKYWDFSTPELLKTIDVKF---PIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 111 (112)
+++++||+++++++..+..+. .+.+++|+|+++.+
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999999999887766665443 47889999988754
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.2e-16 Score=96.16 Aligned_cols=97 Identities=22% Similarity=0.229 Sum_probs=81.9
Q ss_pred ccCCCCCcCCCeEEcCC--CCEEEEEc-CCeEEEEeCCCCc--eeeeccccCCceEEEEEecC--CCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSND--VKRLLVCT-SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPA--STPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~--~~~l~~~~-~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~ 74 (112)
+.+|...|.+ ++|+++ ++.|++++ |+.|++||+.+++ ....+..|...+.+++|+|+ +. ++++++
T Consensus 51 ~~~h~~~v~~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-------~l~~~~ 122 (379)
T 3jrp_A 51 LTGHEGPVWR-VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-------LLLVAS 122 (379)
T ss_dssp ECCCSSCEEE-EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-------EEEEEE
T ss_pred ecCCCCcEEE-EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCC-------EEEEec
Confidence 4679999998 999987 89999998 9999999998876 56677788999999999998 74 777999
Q ss_pred cCCcEEEEeCCCCce--EEEEecCC-CEEEEEEcC
Q 033738 75 LDETIKYWDFSTPEL--LKTIDVKF-PIFSMVRGK 106 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~--~~~~~~~~-~v~~~~~~~ 106 (112)
.|+.+++||+.++.. ...+..+. .+.+++|+|
T Consensus 123 ~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 123 SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 999999999987733 33444454 999999999
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.73 E-value=3.2e-16 Score=92.49 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=72.9
Q ss_pred cCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 9 VSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
... ++||+++ .|++|.|++|++||+.+++.+..+. .|...|.+++|+|++. ++++++.|+.+++||+++
T Consensus 28 ~~~-l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-------~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 28 LNL-VDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-------YLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp CBC-EEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-------EEEEEETTSEEEEEETTT
T ss_pred ceE-EEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-------EEEEEECCCcEEEeecCC
Confidence 455 8999876 7777779999999999998776554 5677899999999995 788999999999999999
Q ss_pred CceEEEEecCC-CEEEEEE
Q 033738 87 PELLKTIDVKF-PIFSMVR 104 (112)
Q Consensus 87 ~~~~~~~~~~~-~v~~~~~ 104 (112)
++++..+..|. .+.++.+
T Consensus 99 ~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 99 QKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp TEEEEEEECCSSCEEEEEE
T ss_pred ceeEEEecCccceEEEeec
Confidence 99999888776 5655544
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.73 E-value=5.6e-17 Score=98.80 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=84.9
Q ss_pred ccCCCCCcCCCeEEcCC-CCEEEEEc-CCeEEEEeCCCCc------eee---eccccCCceEEEEEecCCCCccceeEEE
Q 033738 2 IRGGRSYVSSPPAFSND-VKRLLVCT-SNTVSIFSTSTGL------QIS---SLEGHTAPVTTVIVVPASTPATKILSYC 70 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~-~~~l~~~~-~~~v~~~~~~~~~------~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 70 (112)
+.+|...|.+ ++|+|+ ++.|++++ |+.|++||+.+++ ... ....|...+.+++|+|++. .++
T Consensus 109 ~~~h~~~v~~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l 181 (416)
T 2pm9_A 109 FSNHSSSVKT-VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA------HVF 181 (416)
T ss_dssp CCCSSSCCCE-EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT------TEE
T ss_pred ccCCccceEE-EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC------cEE
Confidence 4678999998 999998 89999998 8999999998765 222 3356888999999999942 267
Q ss_pred EeeecCCcEEEEeCCCCceEEEEecC-------CCEEEEEEcCCCc
Q 033738 71 WTASLDETIKYWDFSTPELLKTIDVK-------FPIFSMVRGKKGF 109 (112)
Q Consensus 71 ~~~~~d~~i~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 109 (112)
++++.|+.+++||+++++.+..+..+ ..+.+++|+|++.
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS 227 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC
Confidence 79999999999999999988888764 3899999999974
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=101.76 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=82.9
Q ss_pred ccCCCCCcCCCeEEcCCC-CEEEEEc-CCeEEEEeCCCCce----eeeccccCC------------ceEEEEEecCCCCc
Q 033738 2 IRGGRSYVSSPPAFSNDV-KRLLVCT-SNTVSIFSTSTGLQ----ISSLEGHTA------------PVTTVIVVPASTPA 63 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~-~~l~~~~-~~~v~~~~~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~ 63 (112)
+.+|...|.+ ++|+|++ +.|++++ |+.|++||+++++. ...+..+.. .+.+++|+|++.
T Consensus 222 ~~~~~~~v~~-~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-- 298 (447)
T 3dw8_B 222 MEELTEVITA-AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-- 298 (447)
T ss_dssp GGGCCCCEEE-EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS--
T ss_pred ccccCcceEE-EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC--
Confidence 4578889998 9999998 8999998 99999999988765 566666665 899999999995
Q ss_pred cceeEEEEeeecCCcEEEEeCCC-CceEEEEecCCC----------------EEEEEEcCCCcEe
Q 033738 64 TKILSYCWTASLDETIKYWDFST-PELLKTIDVKFP----------------IFSMVRGKKGFAV 111 (112)
Q Consensus 64 ~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~~~~----------------v~~~~~~~~~~~~ 111 (112)
++++++. +.+++||++. ++++..+..+.. +..++|+|+++++
T Consensus 299 -----~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l 357 (447)
T 3dw8_B 299 -----YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV 357 (447)
T ss_dssp -----EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE
T ss_pred -----EEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE
Confidence 6778888 9999999997 888877776653 2348999999876
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.73 E-value=2.8e-16 Score=96.00 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=85.3
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
|...|.+ ++|+|+++.|++++ |+.|++||+.+++.+..+..|...+.+++|++ . ++++++.|+.+++||
T Consensus 133 ~~~~v~~-v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~-------~l~~~~~dg~i~i~d 202 (401)
T 4aez_A 133 ESTYVAS-VKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR--H-------VLSSGSRSGAIHHHD 202 (401)
T ss_dssp TTCCEEE-EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET--T-------EEEEEETTSEEEEEE
T ss_pred CCCCEEE-EEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC--C-------EEEEEcCCCCEEEEe
Confidence 6788887 99999999999998 99999999999988888989999999999943 2 677999999999999
Q ss_pred CC-CCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 84 FS-TPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 84 ~~-~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
++ .+..+..+..+. .+.+++|+|++++++
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 203 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLA 233 (401)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred cccCcceeeEEcCCCCCeeEEEEcCCCCEEE
Confidence 98 456667777666 999999999998763
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.73 E-value=5.8e-17 Score=96.15 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=80.6
Q ss_pred ccCCCCCcCCCeEEcC--CCCEEEEEc-CCeEEEEeCCCC---------ceeeeccccCCceEEEEEecC--CCCcccee
Q 033738 2 IRGGRSYVSSPPAFSN--DVKRLLVCT-SNTVSIFSTSTG---------LQISSLEGHTAPVTTVIVVPA--STPATKIL 67 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~--~~~~l~~~~-~~~v~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~ 67 (112)
+.+|...|.+ ++|+| +++.|++++ |+.|++||++++ +....+..|...+.+++|+|+ +.
T Consensus 53 ~~~~~~~v~~-~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------ 125 (351)
T 3f3f_A 53 WRAHDSSIVA-IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL------ 125 (351)
T ss_dssp EECCSSCEEE-EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS------
T ss_pred eccCCCcEEE-EEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc------
Confidence 4578999998 99999 699999998 999999999876 446677789999999999998 74
Q ss_pred EEEEeeecCCcEEEEeCCCCceEEEEe-------------cC-CCEEEEEEcCC
Q 033738 68 SYCWTASLDETIKYWDFSTPELLKTID-------------VK-FPIFSMVRGKK 107 (112)
Q Consensus 68 ~~~~~~~~d~~i~~~~~~~~~~~~~~~-------------~~-~~v~~~~~~~~ 107 (112)
++++++.|+.+++||+++++.+..+. .+ ..+.++.|+|+
T Consensus 126 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 178 (351)
T 3f3f_A 126 -KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPS 178 (351)
T ss_dssp -EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCC
T ss_pred -EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccC
Confidence 77799999999999998876543322 12 27889999986
No 102
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.73 E-value=1.8e-16 Score=94.99 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=83.1
Q ss_pred ccCCCCCcCCCeEEcCC---C-CEEEEE-cCCeEEEEeCCCCceeeeccc-----cCCceEEEEEecCCCCccceeEEEE
Q 033738 2 IRGGRSYVSSPPAFSND---V-KRLLVC-TSNTVSIFSTSTGLQISSLEG-----HTAPVTTVIVVPASTPATKILSYCW 71 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~---~-~~l~~~-~~~~v~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~ 71 (112)
..+|.+.|.+ ++|+|+ + ..++++ +++.|++||+.+++.+..+.. +...+.+++|+|+..... .+++
T Consensus 14 ~~~h~~~v~~-i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~l~ 89 (366)
T 3k26_A 14 KEDHNQPLFG-VQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSH---PLLA 89 (366)
T ss_dssp ECTTCSCEEE-EEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCC---EEEE
T ss_pred ecCCCCceEE-EEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCC---CEEE
Confidence 3579999998 999984 3 444444 488999999998766655543 557799999999931000 2677
Q ss_pred eeecCCcEEEEeCCCCceEEEEecCC-CEEEEEEcC-CCcEe
Q 033738 72 TASLDETIKYWDFSTPELLKTIDVKF-PIFSMVRGK-KGFAV 111 (112)
Q Consensus 72 ~~~~d~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~-~~~~~ 111 (112)
+++.|+.|++||+.+++.+..+..+. .+.+++|+| +++++
T Consensus 90 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL 131 (366)
T ss_dssp EEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEE
T ss_pred EecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEE
Confidence 99999999999999999999888766 999999999 77765
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.72 E-value=5e-17 Score=97.15 Aligned_cols=102 Identities=19% Similarity=0.310 Sum_probs=83.3
Q ss_pred cCCCCCcCCCeEEcC---CCCEEEEEc-CCeEEEEeCCCCceeeecc-----ccCCceEEEEEecCCCCccceeEEEEee
Q 033738 3 RGGRSYVSSPPAFSN---DVKRLLVCT-SNTVSIFSTSTGLQISSLE-----GHTAPVTTVIVVPASTPATKILSYCWTA 73 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~---~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 73 (112)
..|...+.+ ++|+| +++.+++++ |+.|++||+++++....+. .|...+.+++|+|++. .+++++
T Consensus 206 ~~~~~~v~~-~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~~~ 278 (357)
T 3i2n_A 206 TNIKNGVCS-LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR------ELFLTA 278 (357)
T ss_dssp EECSSCEEE-EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE------EEEEEE
T ss_pred cCCCCceEE-EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC------cEEEEE
Confidence 346778887 99999 899999998 8999999998765544443 7899999999999983 267799
Q ss_pred ecCCcEEEEeCCCC-------------------ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 74 SLDETIKYWDFSTP-------------------ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 74 ~~d~~i~~~~~~~~-------------------~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+.|+.+++||++.+ +.+..+..+. .+.+++|+|+++++
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 99999999998754 3455666666 89999999999865
No 104
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.72 E-value=4.9e-17 Score=97.20 Aligned_cols=102 Identities=11% Similarity=0.161 Sum_probs=81.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEE-EEc----CCeEEEEeCCCCceeeec-cccCCceEEEEEecC---CCCccceeEEEEe
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLL-VCT----SNTVSIFSTSTGLQISSL-EGHTAPVTTVIVVPA---STPATKILSYCWT 72 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~-~~~----~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~~~~~~~~~~~ 72 (112)
+++|.+.|.+ ++|+|++..++ +++ |+.|++||+.+++..... ..|...|.+++|+|+ +. ++++
T Consensus 14 ~~~h~~~v~~-~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~l~~ 85 (357)
T 3i2n_A 14 QKGFNYTVFD-CKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQR-------YLAT 85 (357)
T ss_dssp EEECSSCEEE-EEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTC-------CEEE
T ss_pred ccCCCCceEE-EEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCc-------eEEE
Confidence 4679999998 99999996655 553 689999999987654332 368889999999998 43 6779
Q ss_pred eecCCcEEEEeCCCCc-eEEEEecCC-CEEEEEE------cCCCcEe
Q 033738 73 ASLDETIKYWDFSTPE-LLKTIDVKF-PIFSMVR------GKKGFAV 111 (112)
Q Consensus 73 ~~~d~~i~~~~~~~~~-~~~~~~~~~-~v~~~~~------~~~~~~~ 111 (112)
++.|+.+++||+.+++ .+..+..+. .+.++.| +|+++.+
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l 132 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEI 132 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEE
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEE
Confidence 9999999999999887 777887776 8999954 6777665
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.8e-16 Score=92.48 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=81.6
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ ++| |+++.|++++ |+.|++||+.+++....+..|...+.+++|+|++. ++++++.|+.++
T Consensus 14 l~~h~~~v~~-~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~ 84 (313)
T 3odt_A 14 LKGHDQDVRD-VVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE-------LLLFGGKDTMIN 84 (313)
T ss_dssp ECCCSSCEEE-EEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT-------EEEEEETTSCEE
T ss_pred hhCCCCCcEE-EEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC-------EEEEecCCCeEE
Confidence 6789999998 999 9999999998 99999999998887888888999999999999995 778999999999
Q ss_pred EEeCCCC---ceEEEEecCC-CEEEEEEc
Q 033738 81 YWDFSTP---ELLKTIDVKF-PIFSMVRG 105 (112)
Q Consensus 81 ~~~~~~~---~~~~~~~~~~-~v~~~~~~ 105 (112)
+|++... +.+..+..+. .+.++.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSFQ 113 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEec
Confidence 9998654 4556666665 88888883
No 106
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.71 E-value=3.2e-16 Score=96.96 Aligned_cols=100 Identities=18% Similarity=0.211 Sum_probs=87.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...+.+ ++|+|+++.+++++ |+.|++||+++++.+..+..|...+.++++++ . ++++++.|+.++
T Consensus 306 ~~~~~~~v~~-~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-------~l~s~s~dg~v~ 375 (464)
T 3v7d_B 306 LSGHTDRIYS-TIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--K-------FLVSAAADGSIR 375 (464)
T ss_dssp ECCCSSCEEE-EEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS--S-------EEEEEETTSEEE
T ss_pred ecCCCCCEEE-EEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC--C-------EEEEEeCCCcEE
Confidence 4578889998 99999999999998 89999999999998999999999999999973 2 677999999999
Q ss_pred EEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+||+.++...........+..++|+|+++++
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSDNIL 406 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECSSEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCCCEE
Confidence 9999998877777665677778889988765
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2e-16 Score=97.91 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=84.5
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceee----eccccCCceEEEEEecC---CCCccceeEEEEeeec
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQIS----SLEGHTAPVTTVIVVPA---STPATKILSYCWTASL 75 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~ 75 (112)
+|...+.+ ++|+|+++.|++++ ++.+++|++.++.... .+..|...|.+++|+|+ +. ++++++.
T Consensus 147 ~~~~~v~~-~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-------~l~s~~~ 218 (450)
T 2vdu_B 147 CFSKRPNA-ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-------FIITSDR 218 (450)
T ss_dssp ECSSCEEE-EEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-------EEEEEET
T ss_pred cCCCCceE-EEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-------EEEEEcC
Confidence 45677887 99999999999998 8999999998765443 67788999999999999 73 7789999
Q ss_pred CCcEEEEeCCCCceEEEEe-cCC-CEEEEEEcCCCcEeC
Q 033738 76 DETIKYWDFSTPELLKTID-VKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 76 d~~i~~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~~~ 112 (112)
|+.|++||+.++..+..+. .+. .+.+++|+ ++++++
T Consensus 219 d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 219 DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 9999999999998887743 454 89999999 888763
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.71 E-value=6.2e-16 Score=93.37 Aligned_cols=85 Identities=18% Similarity=0.150 Sum_probs=71.5
Q ss_pred CEEEE--Ec-CCeEEEEeCCCCc----------------eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCc-E
Q 033738 20 KRLLV--CT-SNTVSIFSTSTGL----------------QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET-I 79 (112)
Q Consensus 20 ~~l~~--~~-~~~v~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~-i 79 (112)
..++. ++ ++.|++||+.+++ ....+.+|.+.|.+++|+|++. ++++++.|++ +
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-------~l~s~s~d~~~v 220 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-------MVATCSQDGTII 220 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-------EEEEEETTCSEE
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-------EEEEEeCCCCEE
Confidence 45555 34 7999999998754 1567788999999999999995 7889999998 9
Q ss_pred EEEeCCCCceEEEEe-c-CC-CEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTID-V-KF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~-~-~~-~v~~~~~~~~~~~~ 111 (112)
++||+++++++..+. . +. .|.+++|+|+|+++
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 999999999999998 3 44 99999999999876
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.71 E-value=4.6e-17 Score=99.43 Aligned_cols=90 Identities=16% Similarity=0.054 Sum_probs=71.6
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCce-----eeeccccCCceEEEEEec--------CCCCccceeEEEEeeecCCc
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQ-----ISSLEGHTAPVTTVIVVP--------ASTPATKILSYCWTASLDET 78 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~d~~ 78 (112)
..+.+++..+++++ |++|++||.+.+.. +..+.+|.+.|.+++|+| ++. ++++++.|++
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-------~las~s~D~t 167 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-------VIASVGDDCT 167 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-------EEEEEETTSE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-------EEEEEECCCe
Confidence 34455667888998 99999999987643 234678999999999998 553 7789999999
Q ss_pred EEEEeCCCCceEEEEecC-CCEEEEEEcCCCc
Q 033738 79 IKYWDFSTPELLKTIDVK-FPIFSMVRGKKGF 109 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 109 (112)
+++||+.++.++..+..+ .++.+++|+|++.
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNP 199 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEE
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCC
Confidence 999999887766665554 4999999999875
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.70 E-value=9.9e-16 Score=92.87 Aligned_cols=103 Identities=14% Similarity=0.236 Sum_probs=80.9
Q ss_pred ccCCCCCcCCCeEEcCCCC-EEEEEc-CCeEEEEeCCCCc-eeeec---------------cccCCceEEEEEecCCCCc
Q 033738 2 IRGGRSYVSSPPAFSNDVK-RLLVCT-SNTVSIFSTSTGL-QISSL---------------EGHTAPVTTVIVVPASTPA 63 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~-~l~~~~-~~~v~~~~~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~~ 63 (112)
+.+|...|.+ ++|+|+++ .+++++ |+.|++||++++. ....+ ..|...+.+++|+|++.
T Consensus 182 ~~~~~~~v~~-~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 258 (408)
T 4a11_B 182 LQGHRQEILA-VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-- 258 (408)
T ss_dssp ECCCCSCEEE-EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS--
T ss_pred ecCCCCcEEE-EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC--
Confidence 4578889998 99999998 577887 8999999997654 22222 46788899999999985
Q ss_pred cceeEEEEeeecCCcEEEEeCCCC-----------------------------------------------ceEEEEecC
Q 033738 64 TKILSYCWTASLDETIKYWDFSTP-----------------------------------------------ELLKTIDVK 96 (112)
Q Consensus 64 ~~~~~~~~~~~~d~~i~~~~~~~~-----------------------------------------------~~~~~~~~~ 96 (112)
++++++.|+.+++||+.++ +.+..+..+
T Consensus 259 -----~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 259 -----HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp -----EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred -----EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 7779999999999997654 334445555
Q ss_pred C-CEEEEEEcCCCcEeC
Q 033738 97 F-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 97 ~-~v~~~~~~~~~~~~~ 112 (112)
. .|.+++|+|++++++
T Consensus 334 ~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELY 350 (408)
T ss_dssp SSCEEEEEEETTTTEEE
T ss_pred CCeEEEEEEcCCCCEEE
Confidence 5 899999999998763
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.70 E-value=4.1e-16 Score=92.87 Aligned_cols=98 Identities=14% Similarity=0.212 Sum_probs=83.5
Q ss_pred CCCCCcCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCC------ceeeeccccCC---------ceEEEEEecCCCCccce
Q 033738 4 GGRSYVSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTG------LQISSLEGHTA---------PVTTVIVVPASTPATKI 66 (112)
Q Consensus 4 ~h~~~v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~------~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~ 66 (112)
.|...+.+ ++|+| +++.+++++ |+.+++|+++.. +....+..|.. .+.+++|+|++.
T Consensus 191 ~~~~~i~~-i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~----- 264 (342)
T 1yfq_A 191 GLKYQIRD-VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK----- 264 (342)
T ss_dssp SCSSCEEE-EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-----
T ss_pred CCCCceeE-EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-----
Confidence 45667887 99999 999999998 899999999776 55566666644 899999999985
Q ss_pred eEEEEeeecCCcEEEEeCCCCceEEEEecC-C-CEEEEEEcCCCcEe
Q 033738 67 LSYCWTASLDETIKYWDFSTPELLKTIDVK-F-PIFSMVRGKKGFAV 111 (112)
Q Consensus 67 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~-~v~~~~~~~~~~~~ 111 (112)
++++++.|+.+++||+.+++.+..+..+ . ++.+++ |+++++
T Consensus 265 --~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l 307 (342)
T 1yfq_A 265 --FLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNIL 307 (342)
T ss_dssp --CEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEE
T ss_pred --EEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeE
Confidence 6779999999999999999999988876 5 899988 888776
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.70 E-value=1.5e-15 Score=93.30 Aligned_cols=90 Identities=18% Similarity=0.298 Sum_probs=75.5
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
+... ++||++ +.|++|.|++|++||..+++....+. .|...|++++|+|++. ++++++.|+.|++||+.
T Consensus 107 y~~~-l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-------~lasgs~Dg~v~iWd~~ 177 (420)
T 4gga_A 107 YLNL-VDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-------YLAVGTSSAEVQLWDVQ 177 (420)
T ss_dssp TCBC-EEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-------EEEEEETTSCEEEEETT
T ss_pred ccee-EEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-------EEEEEECCCeEEEEEcC
Confidence 4555 899975 57777779999999999998766554 5677899999999995 78899999999999999
Q ss_pred CCceEEEEecCC-CEEEEEEcC
Q 033738 86 TPELLKTIDVKF-PIFSMVRGK 106 (112)
Q Consensus 86 ~~~~~~~~~~~~-~v~~~~~~~ 106 (112)
+++++..+..|. .+.++.+++
T Consensus 178 ~~~~~~~~~~h~~~v~~~s~~~ 199 (420)
T 4gga_A 178 QQKRLRNMTSHSARVGSLSWNS 199 (420)
T ss_dssp TTEEEEEECCCSSCEEEEEEET
T ss_pred CCcEEEEEeCCCCceEEEeeCC
Confidence 999999988877 788777653
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.69 E-value=1.9e-15 Score=92.83 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=84.6
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+|...|.+ ++|+|+|++|++|+ |+.|++||+++++.+..+.+|...+.+++++ +. ++++++.|+.+++
T Consensus 144 ~~~~~~V~s-v~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~-------~l~sgs~d~~i~~ 213 (420)
T 4gga_A 144 EQPGEYISS-VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY-------ILSSGSRSGHIHH 213 (420)
T ss_dssp CSTTCCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT-------EEEEEETTSEEEE
T ss_pred cCCCCcEEE-EEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC-------EEEEEeCCCceeE
Confidence 467788998 99999999999998 9999999999999999999999999888775 32 6779999999999
Q ss_pred EeCCCC-ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 82 WDFSTP-ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~-~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
||.... ..+..+..+. .+..+.++|+++++
T Consensus 214 ~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eeecccceeeEEecccccceeeeeecCCCCee
Confidence 998764 4456666666 89999999998865
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.69 E-value=5.3e-16 Score=95.13 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=88.3
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+|.+.+.+ ++|+|+++.+++++ |+.|++||+++++....+..+...+.+++|+|++. .+++++..++.+++
T Consensus 166 ~~~~~~v~~-~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 166 KKKLGFVET-ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRD------LVYCSNWISEDISV 238 (433)
T ss_dssp HTTCCEEEE-EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTT------EEEEEETTTTEEEE
T ss_pred cccCCceeE-EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCC------EEEEEecCCCcEEE
Confidence 367778887 99999999999998 89999999998888888888888999999999985 23346668999999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
||+++++.+..+..+..+.+++|+|+|+.++
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 239 IDRKTKLEIRKTDKIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp EETTTTEEEEECCCCSEEEEEEECTTSSEEE
T ss_pred EECCCCcEEEEecCCCCceEEEEcCCCCEEE
Confidence 9999998888887777899999999998763
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.69 E-value=6.9e-16 Score=92.38 Aligned_cols=96 Identities=20% Similarity=0.307 Sum_probs=81.6
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEE--ecCCCCccceeEEEEeeecCCc
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIV--VPASTPATKILSYCWTASLDET 78 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~~ 78 (112)
+.+|.+.|.+ ++|+|+++.|++++ |+.|++||+.+++... +..|...+.+++| +|++. ++++++.|+.
T Consensus 82 ~~~h~~~v~~-~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-------~l~~~~~dg~ 152 (368)
T 3mmy_A 82 QQMHTGPVLD-VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS-------CVMTGSWDKT 152 (368)
T ss_dssp EEECSSCEEE-EEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE-------EEEEEETTSE
T ss_pred eccccCCEEE-EEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC-------EEEEccCCCc
Confidence 4578899998 99999999999998 9999999999887544 5668999999999 77773 6789999999
Q ss_pred EEEEeCCCCceEEEEecCCCEEEEEEcC
Q 033738 79 IKYWDFSTPELLKTIDVKFPIFSMVRGK 106 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (112)
+++||+++++.+..+..+..+.++.+.+
T Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp EEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred EEEEECCCCcEEEEEecCCCceEEEecC
Confidence 9999999999888888777666665554
No 116
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.69 E-value=5.7e-16 Score=95.22 Aligned_cols=94 Identities=16% Similarity=0.216 Sum_probs=78.7
Q ss_pred CCCCcCCCeE--EcCCCCEEEEEc-CCeEEEEeCCCCceeeeccc--cCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 5 GRSYVSSPPA--FSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEG--HTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 5 h~~~v~~~~~--~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
+...+.+ +. ++++++.+++++ |+.|++||+++++.+..+.. |.+.|.+++|+|++. ++++++.|+.+
T Consensus 167 ~~~~~~~-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-------~l~s~~~dg~i 238 (437)
T 3gre_A 167 KNEYAVR-MRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC-------VLILGTTRGII 238 (437)
T ss_dssp SCCCEEE-EEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-------EEEEEETTSCE
T ss_pred cccCceE-EEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-------EEEEEcCCCeE
Confidence 3444554 55 568899999998 89999999999988888877 788999999999985 77899999999
Q ss_pred EEEeCCCCceEEEEe-cCC-CEEEEEEcC
Q 033738 80 KYWDFSTPELLKTID-VKF-PIFSMVRGK 106 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~-~v~~~~~~~ 106 (112)
++||+++++++..+. .+. ++.+++|+|
T Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 239 DIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 999999999988875 344 899996665
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.68 E-value=8.9e-16 Score=100.34 Aligned_cols=98 Identities=21% Similarity=0.223 Sum_probs=82.5
Q ss_pred ccCCCCCcCCCeEEcCC--CCEEEEEc-CCeEEEEeCCCCc--eeeeccccCCceEEEEEecC--CCCccceeEEEEeee
Q 033738 2 IRGGRSYVSSPPAFSND--VKRLLVCT-SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPA--STPATKILSYCWTAS 74 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~--~~~l~~~~-~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~ 74 (112)
+.+|.+.|.+ ++|+|+ ++.+++++ |+.|++||+.+++ ....+..|...|.+++|+|+ +. ++++++
T Consensus 49 l~~h~~~V~~-l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-------~l~sgs 120 (753)
T 3jro_A 49 LTGHEGPVWR-VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-------LLLVAS 120 (753)
T ss_dssp ECCCSSCEEE-EEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-------EEEEEE
T ss_pred ccCCcCceEE-EEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCC-------EEEEEe
Confidence 4689999998 999988 89999998 9999999998875 56677789999999999998 74 778999
Q ss_pred cCCcEEEEeCCCCc--eEEEEecCC-CEEEEEEcCC
Q 033738 75 LDETIKYWDFSTPE--LLKTIDVKF-PIFSMVRGKK 107 (112)
Q Consensus 75 ~d~~i~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~ 107 (112)
.|+.+++||++++. ....+..+. .+.++.|+|.
T Consensus 121 ~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 121 SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 99999999998763 233444444 9999999993
No 118
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.7e-17 Score=100.03 Aligned_cols=88 Identities=19% Similarity=0.214 Sum_probs=72.8
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecc-ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLE-GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
|.+.|.+ ++|+|+++.|++++ |+.|++||+++++.+..+. .+...|.+++|+|.-.++. .++++++.|+.|++|
T Consensus 213 h~~~v~~-~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~---~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 213 RHGAVSS-ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS---VIVVGGSSKTFLTIW 288 (437)
T ss_dssp GGCCEEE-EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE---EEEEEESTTEEEEEE
T ss_pred CCCceEE-EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc---cEEEEEcCCCcEEEE
Confidence 7888998 99999999999998 9999999999988777765 6777899998876521111 266799999999999
Q ss_pred eCCCCceEEEEecC
Q 033738 83 DFSTPELLKTIDVK 96 (112)
Q Consensus 83 ~~~~~~~~~~~~~~ 96 (112)
|+++++++..+..+
T Consensus 289 d~~~~~~~~~~~~~ 302 (437)
T 3gre_A 289 NFVKGHCQYAFINS 302 (437)
T ss_dssp ETTTTEEEEEEESS
T ss_pred EcCCCcEEEEEEcC
Confidence 99999988887744
No 119
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.66 E-value=3.1e-15 Score=92.10 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=77.7
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-C---CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEE-eeecC
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-S---NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCW-TASLD 76 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~d 76 (112)
+.+|...+.+ ++|+|||+.|++++ + ..|++||+.+++. ..+..+...+.+++|+|++. .++ +++.+
T Consensus 174 l~~~~~~v~~-~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~spdg~-------~la~~~~~~ 244 (415)
T 2hqs_A 174 VHRSPQPLMS-PAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGS-------KLAFALSKT 244 (415)
T ss_dssp EEEESSCEEE-EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSS-------EEEEEECTT
T ss_pred EeCCCCccee-eEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEcCCCC-------EEEEEEecC
Confidence 3467778887 99999999999887 5 4999999998865 45666777899999999995 333 55554
Q ss_pred C--cEEEEeCCCCceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 77 E--TIKYWDFSTPELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~--~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
+ .|++||+.+++.. .+..+ ..+.+++|+|+|+.|
T Consensus 245 g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 245 GSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNL 281 (415)
T ss_dssp SSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEE
T ss_pred CCceEEEEECCCCCEE-eCcCCCCcccceEECCCCCEE
Confidence 4 5999999988764 44444 389999999999865
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.65 E-value=1.2e-14 Score=88.09 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=80.1
Q ss_pred CCcCCCeEEcCCCCEE-EEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 7 SYVSSPPAFSNDVKRL-LVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l-~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
..+.+ ++|+|+++.+ ++++ ++.|++||+.+++....+..+. .+.+++|+|++. .+++++..++.+++||+
T Consensus 32 ~~~~~-~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~------~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 32 SNPMG-AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGK------QVYVTNMASSTLSVIDT 103 (391)
T ss_dssp SSEEE-EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSS------EEEEEETTTTEEEEEET
T ss_pred CCcce-EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCC------EEEEEECCCCEEEEEEC
Confidence 34666 9999999977 5665 8999999999888777776544 889999999985 23345667799999999
Q ss_pred CCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 85 STPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
.+++.+..+..+..+.+++|+|+|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKL 130 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEE
Confidence 999998888887789999999999866
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.64 E-value=9.6e-15 Score=90.15 Aligned_cols=94 Identities=23% Similarity=0.302 Sum_probs=81.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.+.. +++++|+.+++++ |+.|++||+.+++....+.+|.+.|.+++++ +. ++++++.|+.++
T Consensus 114 l~~h~~~v~~--~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-------~l~s~~~dg~i~ 182 (445)
T 2ovr_B 114 LKGHDDHVIT--CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-------IIISGSTDRTLK 182 (445)
T ss_dssp EECSTTSCEE--EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TT-------EEEEEETTSCEE
T ss_pred ecccCCCcEE--EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CC-------EEEEEeCCCeEE
Confidence 5688887754 5777899999998 9999999999999889999999999999997 32 677999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcC
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGK 106 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~ 106 (112)
+||+.+++.+..+..+. .+.++.|++
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~ 209 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHE 209 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecC
Confidence 99999999988888776 898888864
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.63 E-value=9e-15 Score=92.80 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=71.2
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCce-------eeec----cccCCceEEEEEecCCCCccceeEEEEeeec
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQ-------ISSL----EGHTAPVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
.+.+ ++|||||+.|++++ ||+|++||+.++.. +..+ .+|...|.+++|+|++ +++++.
T Consensus 131 sv~s-vafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---------Laass~ 200 (588)
T 2j04_A 131 TYHC-FEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---------LVAALS 200 (588)
T ss_dssp CEEE-EEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---------EEEEET
T ss_pred cEEE-EEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---------EEEEeC
Confidence 3776 99999999999999 99999999987742 3554 5677899999999974 348888
Q ss_pred CCcEEEEeCCCCce---EEEEe-cCC-CEEEEEEc
Q 033738 76 DETIKYWDFSTPEL---LKTID-VKF-PIFSMVRG 105 (112)
Q Consensus 76 d~~i~~~~~~~~~~---~~~~~-~~~-~v~~~~~~ 105 (112)
|+.+++||+..+.. ..++. .+. .|.+++|+
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 99999999987763 34553 454 89999998
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.61 E-value=2e-14 Score=88.16 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=80.6
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceee-----eccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQIS-----SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+.+ ++|+|++..+++++ ++.|++||+.+++... .+..|.+.+.+++|++++. ++++++.|+.+++
T Consensus 124 ~~~~-~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~s~~~d~~v~~ 195 (433)
T 3bws_A 124 QPKS-VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-------LWVSQMQANAVHV 195 (433)
T ss_dssp CBCC-CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-------EEEEEGGGTEEEE
T ss_pred CceE-EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-------EEEEECCCCEEEE
Confidence 4556 99999667777776 7899999999887665 3456788899999999884 7779999999999
Q ss_pred EeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
||+++++.+..+..+. .+.+++|+|+++.+|
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIRDLVY 227 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTTTEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCCCEEE
Confidence 9999999888887665 899999999998763
No 124
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.60 E-value=4e-14 Score=87.28 Aligned_cols=96 Identities=21% Similarity=0.321 Sum_probs=81.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|...|.+ +++ +++.+++++ |+.|++||+++++.+..+..|...+.+++++ +. ++++++.|+.++
T Consensus 252 ~~~~~~~v~~-~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~-------~l~~g~~dg~i~ 319 (435)
T 1p22_A 252 LVGHRAAVNV-VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR-------LVVSGSSDNTIR 319 (435)
T ss_dssp ECCCSSCEEE-EEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TT-------EEEEEETTSCEE
T ss_pred ecCCCCcEEE-EEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CC-------EEEEEeCCCeEE
Confidence 3568888876 777 788999998 9999999999998888999999999999884 32 677999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+++++++..+..+. .+.+++| +++.+
T Consensus 320 iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l 349 (435)
T 1p22_A 320 LWDIECGACLRVLEGHEELVRCIRF--DNKRI 349 (435)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEC--CSSEE
T ss_pred EEECCCCCEEEEEeCCcCcEEEEEe--cCCEE
Confidence 99999999999998776 8999988 44443
No 125
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.59 E-value=4.7e-14 Score=86.98 Aligned_cols=84 Identities=24% Similarity=0.327 Sum_probs=74.2
Q ss_pred EEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEE
Q 033738 14 AFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKT 92 (112)
Q Consensus 14 ~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 92 (112)
+++++++.+++++ |+.|++||+.+++....+.+|.+.|.++++ ++. ++++++.|+.|++||+.+++.+..
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-------~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-------VIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-------EEEEEETTSCEEEEESSSCCEEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-------EEEEEcCCCeEEEEECCCCcEEEE
Confidence 4556899999998 999999999999888899999999999988 553 777999999999999999999988
Q ss_pred EecCC-CEEEEEEcC
Q 033738 93 IDVKF-PIFSMVRGK 106 (112)
Q Consensus 93 ~~~~~-~v~~~~~~~ 106 (112)
+..+. .+.++.|++
T Consensus 209 ~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN 223 (435)
T ss_dssp ECCCCSCEEEEECCT
T ss_pred EcCCCCcEEEEEEcC
Confidence 88776 899999874
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.59 E-value=8.5e-14 Score=85.95 Aligned_cols=91 Identities=21% Similarity=0.287 Sum_probs=78.4
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
+.+|.+.|.+ +.++ ++.+++++ |+.|++||+.+++.+..+..|...|.+++++++ .+++++.|+.++
T Consensus 155 ~~~h~~~v~~-~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~---------~l~s~s~dg~i~ 222 (445)
T 2ovr_B 155 LVGHTGGVWS-SQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK---------RVVSGSRDATLR 222 (445)
T ss_dssp CCCCSSCEEE-EEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT---------EEEEEETTSEEE
T ss_pred EcCCCCCEEE-EEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCC---------EEEEEeCCCEEE
Confidence 5678888887 8886 66888888 999999999999888888899999999998532 567999999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEE
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVR 104 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~ 104 (112)
+||+.+++.+..+..+. .+.++.+
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEE
T ss_pred EEECCCCcEEEEEcCCcccEEEEEE
Confidence 99999999988888776 8888888
No 127
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.59 E-value=1.9e-13 Score=80.59 Aligned_cols=99 Identities=18% Similarity=0.194 Sum_probs=82.0
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+|...|.+ ++|+|+++.+++|+ |+.|++||+++++.+..+.+|...+.++.+ ++. ++++++.++.+++
T Consensus 64 ~~~~~~V~~-v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~-------~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 64 EQPGEYISS-VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY-------ILSSGSRSGHIHH 133 (318)
T ss_dssp CSTTCCEEE-EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT-------EEEEEETTSEEEE
T ss_pred cCCCCeEEE-EEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC-------EEEEEecCCceEe
Confidence 467788998 99999999999998 999999999999988999889888776654 443 6779999999999
Q ss_pred EeCCCC-ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 82 WDFSTP-ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~-~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
|+...+ ..+..+..+. .+..+.+.++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 165 (318)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eecCCCceeEEEEcCccCceEEEEEcCCCCEE
Confidence 998765 4445556655 88999999988765
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.58 E-value=1.3e-13 Score=83.59 Aligned_cols=98 Identities=20% Similarity=0.188 Sum_probs=80.3
Q ss_pred CCcCCCeEEcCCCCEE-EEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 7 SYVSSPPAFSNDVKRL-LVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l-~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
..+.. ++|+|+++.+ ++++ ++.|++||+.+++....+..+ ..+..++|+|++. .++++++.++.+++||+
T Consensus 116 ~~~~~-~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~------~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 116 KSPLG-LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGT------KVYVANFDSMSISVIDT 187 (391)
T ss_dssp SSEEE-EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSS------EEEEEETTTTEEEEEET
T ss_pred CCcce-EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCC------EEEEEeCCCCEEEEEEC
Confidence 35566 9999999977 5666 899999999988877776654 4568999999985 23357788999999999
Q ss_pred CCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 85 STPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
++++....+..+..+.+++|+|+|+.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 188 VTNSVIDTVKVEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp TTTEEEEEEECSSEEEEEEECTTSSEEE
T ss_pred CCCeEEEEEecCCCccceEECCCCCEEE
Confidence 9998888887777899999999998764
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.56 E-value=4.2e-14 Score=85.10 Aligned_cols=78 Identities=13% Similarity=0.173 Sum_probs=59.7
Q ss_pred CCeEEEEeCC-CCceeeeccccCCceEEEEEec---CCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC----C
Q 033738 27 SNTVSIFSTS-TGLQISSLEGHTAPVTTVIVVP---ASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF----P 98 (112)
Q Consensus 27 ~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~----~ 98 (112)
|+.|++|++. .++.+..+..|...+..++|++ ++. ++++++.|++|++||+++|+++.++..+. .
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~-------~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE-------ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT-------EEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc-------eEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 5777777773 3665666666777777777777 443 67799999999999999999999997543 5
Q ss_pred EEEEEEcCCCcEe
Q 033738 99 IFSMVRGKKGFAV 111 (112)
Q Consensus 99 v~~~~~~~~~~~~ 111 (112)
+.+++|+|+|..+
T Consensus 229 v~~vafSpdG~~l 241 (356)
T 2w18_A 229 VCHKAYSEMGLLF 241 (356)
T ss_dssp CEEEEEEETTEEE
T ss_pred eEEEEECCCCCEE
Confidence 6777899999865
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.55 E-value=9e-14 Score=93.54 Aligned_cols=100 Identities=10% Similarity=0.039 Sum_probs=79.6
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC------
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD------ 76 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d------ 76 (112)
+|...+.. ++|+|||+.|++++ ++.+++||+.+++.......+.+.+..++|+|++. ++++++.+
T Consensus 376 ~~~~~~~~-~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~-------~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 376 ENLGNVFA-MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR-------FIAYGFPLKHGETD 447 (1045)
T ss_dssp CCCCSEEE-EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC-------EEEEEEEECSSTTC
T ss_pred CCccceee-eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC-------eEEEEecCcccccc
Confidence 56667776 99999999999888 79999999998876666667888889999999995 44455443
Q ss_pred ----CcEEEEeCCCCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 77 ----ETIKYWDFSTPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 77 ----~~i~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
+.+++||+.+++ ...+..+. .+..++|+|+|+.++
T Consensus 448 ~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp SCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEE
T ss_pred CCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEE
Confidence 489999999887 44554444 788899999998764
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.55 E-value=2e-13 Score=84.06 Aligned_cols=101 Identities=13% Similarity=0.009 Sum_probs=74.5
Q ss_pred cCCCCCcCCCeEEcCCCCEEE-EEc-C--CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeec-CC
Q 033738 3 RGGRSYVSSPPAFSNDVKRLL-VCT-S--NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL-DE 77 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~-~~~-~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-d~ 77 (112)
.+|.+.+.+ ++|+|||+.|+ +++ + ..|++||+.+++ ...+..+...+..++|+|++. +++.++. ++
T Consensus 219 ~~~~~~~~~-~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdg~-------~l~~~s~~~g 289 (415)
T 2hqs_A 219 ASFPRHNGA-PAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQ-------NLAFTSDQAG 289 (415)
T ss_dssp ECCSSCEEE-EEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSS-------EEEEEECTTS
T ss_pred ecCCCcccC-EEEcCCCCEEEEEEecCCCceEEEEECCCCC-EEeCcCCCCcccceEECCCCC-------EEEEEECCCC
Confidence 456667777 99999999887 555 4 469999998876 466777778899999999995 4445544 44
Q ss_pred --cEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 78 --TIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 78 --~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.+++||..+++..........+.+++|+|+|++|+
T Consensus 290 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 290 RPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMV 326 (415)
T ss_dssp SCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEE
T ss_pred CcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEE
Confidence 68888988776533222334788999999998763
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.48 E-value=1.5e-12 Score=77.33 Aligned_cols=94 Identities=13% Similarity=0.275 Sum_probs=73.9
Q ss_pred CCeEEcCCCCEEEEEc--CCeEEEEeCCCCce-eeeccccCCceEEEEEecCCCCccceeEEEEeeecC-C--cEEEEeC
Q 033738 11 SPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-E--TIKYWDF 84 (112)
Q Consensus 11 ~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-~--~i~~~~~ 84 (112)
. ++|+|+|+.+++++ ++.|.+||..+++. ...+..+..+..+++|+|++. ++++...+ + .+++||.
T Consensus 44 ~-~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 44 D-TAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ-------FAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp E-EEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS-------EEEECCCSSSSCEEEEEET
T ss_pred e-EEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC-------EEEEecCCCCcccEEEEEC
Confidence 5 89999999776654 68999999998876 556665555555599999995 44444444 3 8999999
Q ss_pred CCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 85 STPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.+++.+..+..+.....++|+|+|+++|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~spdg~~l~ 143 (331)
T 3u4y_A 116 LKNKFISTIPIPYDAVGIAISPNGNGLI 143 (331)
T ss_dssp TTTEEEEEEECCTTEEEEEECTTSSCEE
T ss_pred CCCCeEEEEECCCCccceEECCCCCEEE
Confidence 9999888888777789999999998654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=1e-12 Score=76.39 Aligned_cols=100 Identities=13% Similarity=0.039 Sum_probs=73.0
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCC-Cceeeecccc-CCceEEEEEecCCCCccceeEEEEeee--cCCc
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTST-GLQISSLEGH-TAPVTTVIVVPASTPATKILSYCWTAS--LDET 78 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~--~d~~ 78 (112)
..|...+.+ ++|+|+|+.+++++++.|++||+.+ ++.......+ ...+.+++|+|++. ++++++ .++.
T Consensus 38 ~~~~~~v~~-~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-------~l~~~~~~~~~~ 109 (297)
T 2ojh_A 38 WQTPELFEA-PNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-------LYAISDKVEFGK 109 (297)
T ss_dssp EEESSCCEE-EEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-------EEEEEECTTTSS
T ss_pred ccCCcceEe-eEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCC-------EEEEEEeCCCCc
Confidence 346677887 9999999999998899999999998 7655554444 35678899999995 555666 3344
Q ss_pred --EEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 79 --IKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 79 --i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+..++..++. ...+..+..+..++|+|+|+.+
T Consensus 110 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l 143 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSF 143 (297)
T ss_dssp CEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEE
T ss_pred ceEEEEECCCCc-eEEeecCCCccceEECCCCCEE
Confidence 4445555554 3445445578889999999865
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.46 E-value=1.6e-12 Score=82.64 Aligned_cols=92 Identities=11% Similarity=0.106 Sum_probs=78.4
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC--CCCce
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF--STPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~--~~~~~ 89 (112)
..++|++..+++++ ++.|.+||..+++.+..+..... +..++++|+++ ++++++.|+.|++||+ .++++
T Consensus 143 ~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~-------~l~v~~~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGR-------YLLVIGRDARIDMIDLWAKEPTK 214 (543)
T ss_dssp SCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSC-------EEEEEETTSEEEEEETTSSSCEE
T ss_pred cccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCC-------EEEEECCCCeEEEEECcCCCCcE
Confidence 35788888888887 89999999999988888774333 78999999996 7778888999999999 88888
Q ss_pred EEEEecCCCEEEEEEcC----CCcEeC
Q 033738 90 LKTIDVKFPIFSMVRGK----KGFAVF 112 (112)
Q Consensus 90 ~~~~~~~~~v~~~~~~~----~~~~~~ 112 (112)
+..+..+..+..++|+| +|+++|
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEE
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEE
Confidence 88888777889999999 998875
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.46 E-value=8.5e-13 Score=85.56 Aligned_cols=99 Identities=8% Similarity=-0.015 Sum_probs=71.9
Q ss_pred CCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCc------------------eEEEEEecCCCCccce
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAP------------------VTTVIVVPASTPATKI 66 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~~~~~ 66 (112)
|...+.. ++|||||+.|++++++.|++||+.+++.......+... +..++|+|+++
T Consensus 112 ~~~~~~~-~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~----- 185 (723)
T 1xfd_A 112 SNAKLQY-AGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT----- 185 (723)
T ss_dssp CSCCCSB-CCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-----
T ss_pred ccccccc-cEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-----
Confidence 3344666 99999999999999899999999887654443332222 36899999995
Q ss_pred eEEEEeeecC----------------------------------CcEEEEeCCCCceEEEEecC------C-CEEEEEEc
Q 033738 67 LSYCWTASLD----------------------------------ETIKYWDFSTPELLKTIDVK------F-PIFSMVRG 105 (112)
Q Consensus 67 ~~~~~~~~~d----------------------------------~~i~~~~~~~~~~~~~~~~~------~-~v~~~~~~ 105 (112)
.+++++.+ ..+++||+.+++....+..+ . .+..++|+
T Consensus 186 --~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 186 --RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA 263 (723)
T ss_dssp --EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred --EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe
Confidence 33344432 27999999988765555543 3 78899999
Q ss_pred CCCcEe
Q 033738 106 KKGFAV 111 (112)
Q Consensus 106 ~~~~~~ 111 (112)
|||+.+
T Consensus 264 pDg~~l 269 (723)
T 1xfd_A 264 TSTKVA 269 (723)
T ss_dssp SSSEEE
T ss_pred CCCeEE
Confidence 999876
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=1.2e-12 Score=85.15 Aligned_cols=94 Identities=11% Similarity=0.083 Sum_probs=73.8
Q ss_pred cCCCeEEcCCCCEEEEEcCCeEEEEeCCCCc--eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 9 VSSPPAFSNDVKRLLVCTSNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
+.. ++|||||+.|++++++.|++||+.++. ....+..+...+..++|+|+++ +++.++ ++.|++||+.+
T Consensus 111 v~~-~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~-------~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 111 IVD-YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG-------FVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp SCC-CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS-------EEEEEE-TTEEEEEETTT
T ss_pred cce-eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCC-------EEEEEe-CCcEEEEecCC
Confidence 666 999999999999988999999998772 3556666778899999999995 444554 56999999998
Q ss_pred CceEEEEecCC-C----------------EEEEEEcCCCcEe
Q 033738 87 PELLKTIDVKF-P----------------IFSMVRGKKGFAV 111 (112)
Q Consensus 87 ~~~~~~~~~~~-~----------------v~~~~~~~~~~~~ 111 (112)
++.......+. . +..+.|+|||+.|
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l 223 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI 223 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence 87655443332 2 4779999999876
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.45 E-value=1.2e-12 Score=84.86 Aligned_cols=100 Identities=11% Similarity=-0.006 Sum_probs=72.9
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCC-----CceeeeccccCCc--------------eEEEEEecCCCCcc
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTST-----GLQISSLEGHTAP--------------VTTVIVVPASTPAT 64 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~ 64 (112)
.+...+.. ++|+|||+.|+++.++.|++||+.+ ++.......+... +..++|+|+++
T Consensus 118 ~~~~~~~~-~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~--- 193 (706)
T 2z3z_A 118 DTNEETAS-LDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS--- 193 (706)
T ss_dssp CCTTCCTT-CEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS---
T ss_pred CCcccccC-CcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC---
Confidence 34566776 9999999999997799999999987 6544433333222 47899999995
Q ss_pred ceeEEEEeee---------------------------------cCCcEEEEeCCCCceEEEEec--C-CCEEEEEEcCCC
Q 033738 65 KILSYCWTAS---------------------------------LDETIKYWDFSTPELLKTIDV--K-FPIFSMVRGKKG 108 (112)
Q Consensus 65 ~~~~~~~~~~---------------------------------~d~~i~~~~~~~~~~~~~~~~--~-~~v~~~~~~~~~ 108 (112)
++++++ .+..+++||+.+++....... + ..+..++|+|+|
T Consensus 194 ----~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 269 (706)
T 2z3z_A 194 ----CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE 269 (706)
T ss_dssp ----EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS
T ss_pred ----EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC
Confidence 444554 346799999998876544322 2 368899999999
Q ss_pred cEe
Q 033738 109 FAV 111 (112)
Q Consensus 109 ~~~ 111 (112)
+.+
T Consensus 270 ~~l 272 (706)
T 2z3z_A 270 NIL 272 (706)
T ss_dssp SEE
T ss_pred CEE
Confidence 865
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.45 E-value=5.3e-12 Score=75.41 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=77.2
Q ss_pred CCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
...+.. ++|+|+|+.++.++ ++.|.+||..+++....+.... ...++|+|++. .++++...++.+.+||
T Consensus 230 ~~~~~~-~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~------~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 230 EHFFIN-ISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARN------EAYVTHRQAGKVSVID 300 (353)
T ss_dssp CCCEEE-EEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTT------EEEEEETTTTEEEEEE
T ss_pred Ccccce-EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCC------EEEEEECCCCeEEEEE
Confidence 334455 89999999877665 5999999999888776665433 25689999985 2344566789999999
Q ss_pred CCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 84 FSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
..+++.+..+..+..+..++|+|+|+.+|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 329 (353)
T 3vgz_A 301 AKSYKVVKTFDTPTHPNSLALSADGKTLY 329 (353)
T ss_dssp TTTTEEEEEEECCSEEEEEEECTTSCEEE
T ss_pred CCCCeEEEEEecCCCCCeEEEcCCCCEEE
Confidence 99999988888777889999999999764
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=1e-12 Score=85.50 Aligned_cols=95 Identities=9% Similarity=0.039 Sum_probs=71.5
Q ss_pred CCcCCCeEEcCCCCEEEEEc--CC-----eEEEEeCCCCceeeeccccCC------------------------ceEEEE
Q 033738 7 SYVSSPPAFSNDVKRLLVCT--SN-----TVSIFSTSTGLQISSLEGHTA------------------------PVTTVI 55 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~--~~-----~v~~~~~~~~~~~~~~~~~~~------------------------~v~~~~ 55 (112)
..+.. ++|+|||+.|++++ ++ .|++||+.+++....+..+.. .+..++
T Consensus 37 ~~~~~-~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 37 PTLMK-PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCEE-EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCC-ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 34666 99999999999876 56 899999998875554443322 267899
Q ss_pred EecCCCCccceeEEEEeeecCCcEEEEeCCCC---ceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 56 VVPASTPATKILSYCWTASLDETIKYWDFSTP---ELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~---~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
|+|+++ ++++++. +.+++||+.++ ... .+..+ ..+..++|+|||+.|
T Consensus 116 ~SpDg~-------~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 116 WSPDAQ-------RLLFPLG-GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp ECTTSS-------EEEEEET-TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEE
T ss_pred ECCCCC-------EEEEEeC-CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEE
Confidence 999995 4555554 89999999987 443 34333 489999999999876
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=6.7e-13 Score=77.21 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=73.9
Q ss_pred cCCCCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCC-CCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC---
Q 033738 3 RGGRSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTS-TGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD--- 76 (112)
Q Consensus 3 ~~h~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d--- 76 (112)
..|...+.. ++|+|+|+.++.++ ++.+++|++. .+.....+..+...+..++|+|++. +++.++.+
T Consensus 169 ~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~~~~~~~ 240 (297)
T 2ojh_A 169 THGEGRNDG-PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD-------KVVFVSYDADV 240 (297)
T ss_dssp CCSSSCEEE-EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSS-------EEEEEEEETTC
T ss_pred ccCCCcccc-ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCC-------EEEEEEcCCCC
Confidence 345566776 99999999887654 6888888875 3445667777777888999999995 44444443
Q ss_pred --------CcEEEEeCCCCceEEE--EecCC-CEEEEEEcCCCcEeC
Q 033738 77 --------ETIKYWDFSTPELLKT--IDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 77 --------~~i~~~~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~~~ 112 (112)
..+++||+.+++.... ...+. .+..++|+|+|+.|+
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 287 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFA 287 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEE
T ss_pred CcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEE
Confidence 5699999988765433 33434 888899999998763
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.42 E-value=2.2e-11 Score=72.74 Aligned_cols=99 Identities=11% Similarity=0.068 Sum_probs=76.7
Q ss_pred CCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccc----cCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEG----HTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
...+.. ++|+|+|+.+++++ ++.+.+||..+++....+.. +...+..++|+|++. .++++...++.+.
T Consensus 184 ~~~~~~-~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~------~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 184 GKMSTG-LALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ------RAFITDSKAAEVL 256 (353)
T ss_dssp CTTCCC-CEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT------EEEEEESSSSEEE
T ss_pred CCccce-EEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC------EEEEEeCCCCEEE
Confidence 344666 99999999998888 89999999998877665543 344567899999985 2334555669999
Q ss_pred EEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 81 YWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
+||..+++.+..+..+.+ ..++|+|+|+.+|
T Consensus 257 ~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 257 VVDTRNGNILAKVAAPES-LAVLFNPARNEAY 287 (353)
T ss_dssp EEETTTCCEEEEEECSSC-CCEEEETTTTEEE
T ss_pred EEECCCCcEEEEEEcCCC-ceEEECCCCCEEE
Confidence 999999998888776554 5689999998654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.40 E-value=3.5e-12 Score=75.78 Aligned_cols=100 Identities=9% Similarity=-0.033 Sum_probs=71.7
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-C-CeEEEEeCC--CCc--eeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCc
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-S-NTVSIFSTS--TGL--QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET 78 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~-~~v~~~~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 78 (112)
|...+.. ++|+|+|+.+++++ + +.+.+|+++ ++. .+..+.... .+..++|+|++. .+++++..++.
T Consensus 36 ~~~~~~~-~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~------~l~~~~~~~~~ 107 (343)
T 1ri6_A 36 VPGQVQP-MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ------FVFVGSYNAGN 107 (343)
T ss_dssp CSSCCCC-EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS------EEEEEETTTTE
T ss_pred cCCCCce-EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC------EEEEEecCCCe
Confidence 4556776 99999999888776 4 999999987 443 233444333 678999999995 12334445889
Q ss_pred EEEEeCC---CCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 79 IKYWDFS---TPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 i~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
+++||+. .+.....+..+..+.+++|+|+|+.+|
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLW 144 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEE
T ss_pred EEEEECCCCccccccccccCCCCceEEEECCCCCEEE
Confidence 9999994 334455555555788899999998764
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.39 E-value=1.9e-12 Score=83.93 Aligned_cols=93 Identities=12% Similarity=0.023 Sum_probs=69.3
Q ss_pred cCCCeEEcCCCCEEEEEc-C---------CeEEEEeCCCCceeeecc---ccCCceEEEEEecCCCCccceeEEEEeeec
Q 033738 9 VSSPPAFSNDVKRLLVCT-S---------NTVSIFSTSTGLQISSLE---GHTAPVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~---------~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
+.. ++|||||+.|++++ + +.+++||+.+++. ..+. .+...+..++|||+++ .++.++.
T Consensus 63 v~~-~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-------~la~~~~ 133 (723)
T 1xfd_A 63 AIR-YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-------QLIFIFE 133 (723)
T ss_dssp CSE-EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-------CEEEEET
T ss_pred cce-EEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-------EEEEEEC
Confidence 776 99999999999886 3 6789999988764 3333 3334478899999995 4445554
Q ss_pred CCcEEEEeCCCCceEEEEecCC-CE------------------EEEEEcCCCcEe
Q 033738 76 DETIKYWDFSTPELLKTIDVKF-PI------------------FSMVRGKKGFAV 111 (112)
Q Consensus 76 d~~i~~~~~~~~~~~~~~~~~~-~v------------------~~~~~~~~~~~~ 111 (112)
+.|++||..+++.......+. .+ .+++|+|||+.|
T Consensus 134 -~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l 187 (723)
T 1xfd_A 134 -NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (723)
T ss_dssp -TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred -CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEE
Confidence 799999999887766554432 33 689999999876
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.38 E-value=8.9e-13 Score=83.93 Aligned_cols=92 Identities=7% Similarity=-0.081 Sum_probs=71.7
Q ss_pred CCCeEEcCCCCEEEEEc-C----CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCC--cEEEE
Q 033738 10 SSPPAFSNDVKRLLVCT-S----NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE--TIKYW 82 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~-~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~--~i~~~ 82 (112)
.. ++|+|||+.+++++ + ..|++||+.+++ ...+..+.+.+...+|+|+++ .++++..++ .|++|
T Consensus 153 ~~-~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpDG~-------~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FG-FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMK-------VTAGLETAREARLVTV 223 (582)
T ss_dssp CE-EEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEEECCSSCEEEEEEECTTSC-------EEEEEECSSCEEEEEE
T ss_pred ce-EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCCCccccceECCCCC-------EEEEccCCCeeEEEEE
Confidence 44 89999999999776 5 679999998876 456677778889999999995 555777787 89999
Q ss_pred eCCCCceEEEEecCC-CEEEEE--------EcCCCcEe
Q 033738 83 DFSTPELLKTIDVKF-PIFSMV--------RGKKGFAV 111 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~-~v~~~~--------~~~~~~~~ 111 (112)
|+.+++.. .+..+. .+..+. |+|||..+
T Consensus 224 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 224 DPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp CTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred cCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEE
Confidence 99988876 554443 555556 99999544
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.37 E-value=8.2e-13 Score=85.75 Aligned_cols=92 Identities=17% Similarity=0.282 Sum_probs=67.9
Q ss_pred eEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCC---ceEEEEEecCCCCccceeEEEEeeec---------CCcEE
Q 033738 13 PAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTA---PVTTVIVVPASTPATKILSYCWTASL---------DETIK 80 (112)
Q Consensus 13 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~---------d~~i~ 80 (112)
++|+|||++++++.|+.|++||+.+++....+..+.. .+..++|||+++ +++.++. ++.++
T Consensus 21 ~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~-------~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 21 PNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQ-------FVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSS-------EEEEEEEEEECSSSCEEEEEE
T ss_pred cEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCC-------eEEEEecCceeEEeecceEEE
Confidence 8999999766555589999999998876555544332 378999999995 4445544 68999
Q ss_pred EEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+||+.+++.+........+..++|+|||+.|
T Consensus 94 ~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~l 124 (719)
T 1z68_A 94 IYDLSNGEFVRGNELPRPIQYLCWSPVGSKL 124 (719)
T ss_dssp EEETTTTEECCSSCCCSSBCCEEECSSTTCE
T ss_pred EEECCCCccccceecCcccccceECCCCCEE
Confidence 9999988763111223468889999999865
No 146
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.36 E-value=4.3e-11 Score=76.14 Aligned_cols=94 Identities=11% Similarity=0.103 Sum_probs=75.5
Q ss_pred cCCCeEEcCCCCEEEEEc-CCeEEEEeC--CCCceeeeccccCCceEEEEEec----CCCCccceeEEEEeee-cCCcEE
Q 033738 9 VSSPPAFSNDVKRLLVCT-SNTVSIFST--STGLQISSLEGHTAPVTTVIVVP----ASTPATKILSYCWTAS-LDETIK 80 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~~~v~~~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~-~d~~i~ 80 (112)
+.. ++++|||+++++++ ++.|.+||+ .+++.+..+.. ......++|+| +++ ++++++ .++.+.
T Consensus 181 ~~~-v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~-------~l~v~~~~~~~v~ 251 (543)
T 1nir_A 181 VHI-SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDR-------YTIAGAYWPPQFA 251 (543)
T ss_dssp EEE-EEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTT-------EEEEEEEESSEEE
T ss_pred cce-EEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCC-------EEEEEEccCCeEE
Confidence 555 88999999999998 899999999 77877777763 45578999999 985 444555 589999
Q ss_pred EEeCCCCceEEEEecC-----------C-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVK-----------F-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~-----------~-~v~~~~~~~~~~~~ 111 (112)
+||..+++++..+... . .+..+.++|++..+
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 9999999988887642 2 68889999987654
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.36 E-value=1.7e-11 Score=72.67 Aligned_cols=97 Identities=11% Similarity=0.109 Sum_probs=73.3
Q ss_pred CcCCCeEEcCCCCEEEEE-c-CCeEEEEeCCCCceeeeccccC-----CceEEEEEecCCCCccceeEEEEeee------
Q 033738 8 YVSSPPAFSNDVKRLLVC-T-SNTVSIFSTSTGLQISSLEGHT-----APVTTVIVVPASTPATKILSYCWTAS------ 74 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~-~-~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~------ 74 (112)
.+.. ++|+|+|+.++.+ . ++.|.+||+.+++....+.... ..+..++|+|++. +++.+.
T Consensus 35 ~~~~-~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~~~~~~~~ 106 (337)
T 1pby_B 35 TPMV-PMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK-------TLAIYESPVRLE 106 (337)
T ss_dssp CCCC-EEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS-------EEEEEEEEEEEC
T ss_pred Cccc-eEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC-------EEEEEecccccc
Confidence 3566 9999999876544 4 6899999999887666554321 1456889999985 333443
Q ss_pred ------cCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 75 ------LDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 75 ------~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.++.+++||..+++.+..+.....+..++|+|+|+++|
T Consensus 107 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 107 LTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLY 150 (337)
T ss_dssp SSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEE
T ss_pred cccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEE
Confidence 47999999999988888877766788899999998654
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=2.1e-11 Score=72.47 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=71.3
Q ss_pred cCCCeEEcCCCCEEEEEc--CCe-EEEEeCCCCcee----eeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNT-VSIFSTSTGLQI----SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~-v~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
... ++|+|||+.+++++ ++. +.+|++.....+ ............++|+|+++ .++++...++.+++
T Consensus 130 ~~~-~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~------~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 130 AVG-IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN------FAFVANLIGNSIGI 202 (331)
T ss_dssp EEE-EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS------EEEEEETTTTEEEE
T ss_pred ccc-eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC------EEEEEeCCCCeEEE
Confidence 355 89999998666554 577 999998753222 11112344578999999995 23446667899999
Q ss_pred EeCCCCce---EEEEecCCCEEEEEEcCCCcEeC
Q 033738 82 WDFSTPEL---LKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
||+.+++. +..+..+..+..++|+|+|+++|
T Consensus 203 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 203 LETQNPENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp EECSSTTSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred EECCCCcccceeeeccCCCCCceEEECCCCCEEE
Confidence 99998888 77777767788999999999664
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.33 E-value=1.5e-11 Score=83.03 Aligned_cols=98 Identities=12% Similarity=-0.017 Sum_probs=79.0
Q ss_pred CCCC-CcCCCeEEcCCCCEEEEEc-CCeEE-EEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 4 GGRS-YVSSPPAFSNDVKRLLVCT-SNTVS-IFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 4 ~h~~-~v~~~~~~~~~~~~l~~~~-~~~v~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
.|.. .+.. ++|+ ||+.+++++ +..+. +|+...++. ..+..+...+..++|+|++. ++++++.++.++
T Consensus 334 ~~~~~~~~~-~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~~~~~~~~~~SpDG~-------~la~~~~~~~v~ 403 (1045)
T 1k32_A 334 EPLRIRYVR-RGGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGK-------FAVVANDRFEIM 403 (1045)
T ss_dssp CCSCEEEEE-ECSS-SEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSS-------EEEEEETTSEEE
T ss_pred CCCcceEEe-eeEc-CCCeEEEEECCCceEEEEECCCCCc-eEecCCccceeeeEECCCCC-------EEEEECCCCeEE
Confidence 3445 5666 8899 999998887 67888 899887653 44446777899999999995 667888999999
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+||+.+++.......+. .+.+++|+|+|+++
T Consensus 404 ~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 404 TVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred EEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 99999998877775555 78999999999876
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.32 E-value=1.6e-11 Score=80.29 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=70.9
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCc-----eEEEEEecCCCCccceeEEEEeeecC-----
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAP-----VTTVIVVPASTPATKILSYCWTASLD----- 76 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~~~~~~~~d----- 76 (112)
..... +.|+|||++++++ |+.|++||+.+++....+..+... ....+|||++. +++.++.+
T Consensus 17 ~~~~~-~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-------~l~~~~~~~~~~r 87 (740)
T 4a5s_A 17 LKLYS-LRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-------FILLEYNYVKQWR 87 (740)
T ss_dssp CCCCC-EEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-------EEEEEEEEEECSS
T ss_pred ccccc-cEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-------EEEEEECCeeeEE
Confidence 34555 9999999988887 999999999998766555554432 23478999995 44455543
Q ss_pred ----CcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 77 ----ETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ----~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+.+.+||+.+++..........+..++|+|||+.|
T Consensus 88 ~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCE
T ss_pred EccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEE
Confidence 56789999998765433334489999999999865
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.31 E-value=4.4e-11 Score=71.27 Aligned_cols=94 Identities=14% Similarity=0.136 Sum_probs=72.8
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccC-CceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceE
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT-APVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 90 (112)
+++++++..+++++ ++.|++||..+++....+.... ..+..++|+|++. .++++...++.+++||..+++.+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~------~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR------TAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS------EEEEEETTTTEEEEEETTTTEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC------EEEEEeCCCCcEEEEeCCCCcEE
Confidence 66788888888887 8999999999887776665433 1467899999985 23446667899999999999887
Q ss_pred EEEecCC-------CEEEEEEcCCCcEeC
Q 033738 91 KTIDVKF-------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 91 ~~~~~~~-------~v~~~~~~~~~~~~~ 112 (112)
..+..+. .+..++|+|+|+++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 107 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVY 107 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEE
T ss_pred EEEEcccccccccccccceEECCCCCEEE
Confidence 7776433 277899999998764
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.29 E-value=1.6e-10 Score=69.59 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=66.5
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCce--eeec---cccCCceEEEEEecCCCCccceeEEE-Eeeec-CCcE
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQ--ISSL---EGHTAPVTTVIVVPASTPATKILSYC-WTASL-DETI 79 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~--~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~-d~~i 79 (112)
... ++|+|||+.++.++ ++.|.+|++.++.. +..+ ..+......++|+|+++ ++ ++... ++.+
T Consensus 213 ~~~-~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~-------~l~v~~~~~~~~i 284 (361)
T 3scy_A 213 PRH-LIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK-------YLYASNRLKADGV 284 (361)
T ss_dssp EEE-EEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS-------EEEEEECSSSCEE
T ss_pred CeE-EEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC-------EEEEECCCCCCEE
Confidence 445 89999999887665 79999999986643 2222 22334467999999995 44 34444 5899
Q ss_pred EEEeCC--CCc--eEEEEecCCCEEEEEEcCCCcEeC
Q 033738 80 KYWDFS--TPE--LLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 80 ~~~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.+|++. ++. .+..+.....+..++|+|+|+++|
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEE
T ss_pred EEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEE
Confidence 999985 454 334444434778899999998764
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.28 E-value=9.8e-12 Score=79.18 Aligned_cols=96 Identities=15% Similarity=0.039 Sum_probs=73.3
Q ss_pred ccCCCCCcCCCeEEcCCCCEEEEEc-CC--eEEEEeCCCCceeeeccccCCceEEEE--------EecCCCCccceeEEE
Q 033738 2 IRGGRSYVSSPPAFSNDVKRLLVCT-SN--TVSIFSTSTGLQISSLEGHTAPVTTVI--------VVPASTPATKILSYC 70 (112)
Q Consensus 2 ~~~h~~~v~~~~~~~~~~~~l~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~~~~~~~~ 70 (112)
+.+|.+.+.. ++|||||+.|+++. ++ .|++||+++++.. .+..+...+..++ |+|++. ++
T Consensus 190 l~~~~~~~~~-~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-------~~ 260 (582)
T 3o4h_A 190 FDSGEGSFSS-ASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGR-------LA 260 (582)
T ss_dssp ECCSSCEEEE-EEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSC-------EE
T ss_pred eecCCCcccc-ceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCc-------EE
Confidence 3456677776 99999999999665 66 8999999988765 6666666666666 999995 67
Q ss_pred EeeecCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 71 WTASLDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 71 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
++++.++.+++|++ |+... .....+.+++|+ +|+.+
T Consensus 261 ~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l 296 (582)
T 3o4h_A 261 VVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLV 296 (582)
T ss_dssp EEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEE
T ss_pred EEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEE
Confidence 78999999999999 65544 122367888888 77765
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.28 E-value=1.9e-10 Score=68.89 Aligned_cols=100 Identities=10% Similarity=0.128 Sum_probs=68.7
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCCC-Cc--eeeeccc---------cCCceEEEEEecCCCCccceeEEE
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTST-GL--QISSLEG---------HTAPVTTVIVVPASTPATKILSYC 70 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~-~~--~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~ 70 (112)
+...+.. ++|+|||+.|++++ ++.+.+|++.. +. .+..+.. ....+.+++|+|+++ ++
T Consensus 84 ~~~~p~~-~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-------l~ 155 (347)
T 3hfq_A 84 PGTPPAY-VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-------LA 155 (347)
T ss_dssp ESCCCSE-EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-------EE
T ss_pred CCCCCEE-EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-------EE
Confidence 4456666 99999999888776 69999999853 32 2222221 112477899999994 45
Q ss_pred EeeecCCcEEEEeCC-CCceEEE--Eec--CCCEEEEEEcCCCcEeC
Q 033738 71 WTASLDETIKYWDFS-TPELLKT--IDV--KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 71 ~~~~~d~~i~~~~~~-~~~~~~~--~~~--~~~v~~~~~~~~~~~~~ 112 (112)
++...++.+++|++. +++.... +.. ......++|+|+|+++|
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 577778899999998 5543322 222 22678899999998664
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.28 E-value=6.5e-11 Score=70.32 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=67.5
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCC---CCceeeeccccCCceEEEEEecCCCCccceeEEEEeee-cCCcEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTS---TGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS-LDETIKY 81 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~ 81 (112)
.+.. ++|+|+|+.+++++ ++.|.+||+. ..+....+.. ...+.+++|+|++. ++++++ .++.+++
T Consensus 85 ~~~~-~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-------~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 85 SLTH-ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNR-------TLWVPALKQDRICL 155 (343)
T ss_dssp CCSE-EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSS-------EEEEEEGGGTEEEE
T ss_pred CCcE-EEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCC-------EEEEecCCCCEEEE
Confidence 5565 89999999886664 7899999994 3333334433 34578899999985 333444 8899999
Q ss_pred EeCCC-CceEE----EEec--CCCEEEEEEcCCCcEeC
Q 033738 82 WDFST-PELLK----TIDV--KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~-~~~~~----~~~~--~~~v~~~~~~~~~~~~~ 112 (112)
||+.+ ++... .... ...+..++|+|+|+++|
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred EEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 99987 65432 2222 23788899999998663
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.28 E-value=1.2e-11 Score=80.11 Aligned_cols=95 Identities=6% Similarity=-0.111 Sum_probs=71.0
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+.. ++|+|| +.++.+.++.+++||+.+++. ..+..+...+..++|+|+++ .++. ..++.|++||+.+
T Consensus 82 ~~v~~-~~~spd-~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~SpdG~-------~la~-~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFR-TLDAGR-GLVVLFTQGGLVGFDMLARKV-TYLFDTNEETASLDFSPVGD-------RVAY-VRNHNLYIARGGK 150 (706)
T ss_dssp CCCEE-EEETTT-TEEEEEETTEEEEEETTTTEE-EEEECCTTCCTTCEECTTSS-------EEEE-EETTEEEEEECBC
T ss_pred cCcee-EEECCC-CeEEEEECCEEEEEECCCCce-EEccCCcccccCCcCCCCCC-------EEEE-EECCeEEEEecCc
Confidence 35776 999999 777777789999999988754 44444556678899999995 4445 3679999999988
Q ss_pred -----CceEEEEecCC-C--------------EEEEEEcCCCcEeC
Q 033738 87 -----PELLKTIDVKF-P--------------IFSMVRGKKGFAVF 112 (112)
Q Consensus 87 -----~~~~~~~~~~~-~--------------v~~~~~~~~~~~~~ 112 (112)
++.......+. . +.++.|+|||+.|+
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 76654443333 2 47899999998763
No 157
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.27 E-value=5.1e-11 Score=76.77 Aligned_cols=98 Identities=10% Similarity=0.040 Sum_probs=70.8
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-C----------CeEEEEeCCC------Cceeeecc-ccCCceEEEEEecCCCCccce
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-S----------NTVSIFSTST------GLQISSLE-GHTAPVTTVIVVPASTPATKI 66 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~----------~~v~~~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 66 (112)
|...+.. ++|+|||+.|++++ + ..|++||+.+ ++ ...+. .+...+..++|+|+++
T Consensus 128 ~~~~~~~-~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~----- 200 (662)
T 3azo_A 128 GGLRWAD-PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGR----- 200 (662)
T ss_dssp TCEEEEE-EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSS-----
T ss_pred CCccccC-cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCC-----
Confidence 3445565 89999999998887 5 5899999987 54 45555 5556677889999995
Q ss_pred eEEEEeeecC--------CcEEEEeCC-CC---ceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 67 LSYCWTASLD--------ETIKYWDFS-TP---ELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 67 ~~~~~~~~~d--------~~i~~~~~~-~~---~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
+++..+.+ ..|++||+. ++ +.......+ ..+..+.|+|||+++
T Consensus 201 --~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 201 --QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp --EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEE
T ss_pred --EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEE
Confidence 44444433 479999998 56 444444443 488999999999854
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.26 E-value=1.4e-11 Score=79.98 Aligned_cols=97 Identities=9% Similarity=0.048 Sum_probs=67.1
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeec-cccCCce-----------------EEEEEecCCCCccceeE
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSL-EGHTAPV-----------------TTVIVVPASTPATKILS 68 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~~~~~ 68 (112)
..+.. ++|||||+.|+++.++.|++|++.+++..... .++...+ ..++|+|+++
T Consensus 110 ~~~~~-~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~------- 181 (719)
T 1z68_A 110 RPIQY-LCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK------- 181 (719)
T ss_dssp SSBCC-EEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-------
T ss_pred ccccc-ceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCC-------
Confidence 34666 99999999999999999999999887644322 1222212 4799999995
Q ss_pred EEEeeecCC----------------------------------cEEEEeCCCCceE--EEE------ecCC-CEEEEEEc
Q 033738 69 YCWTASLDE----------------------------------TIKYWDFSTPELL--KTI------DVKF-PIFSMVRG 105 (112)
Q Consensus 69 ~~~~~~~d~----------------------------------~i~~~~~~~~~~~--~~~------~~~~-~v~~~~~~ 105 (112)
++++++.|. .+++||+.+++.. ..+ ..+. .+..++|+
T Consensus 182 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 261 (719)
T 1z68_A 182 FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWV 261 (719)
T ss_dssp EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEES
T ss_pred EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEe
Confidence 444554331 7889999887642 121 1233 68899999
Q ss_pred CCCcEe
Q 033738 106 KKGFAV 111 (112)
Q Consensus 106 ~~~~~~ 111 (112)
||++.+
T Consensus 262 pD~~~~ 267 (719)
T 1z68_A 262 TDERVC 267 (719)
T ss_dssp SSSEEE
T ss_pred CCCeEE
Confidence 998765
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.24 E-value=8.2e-11 Score=70.12 Aligned_cols=94 Identities=7% Similarity=0.060 Sum_probs=67.8
Q ss_pred CcCCCeEEcCCCCEEEEE-c-CCeEEEEeCCCCceeeeccccC------CceEEEEEecCCCCccceeEEEEeeec----
Q 033738 8 YVSSPPAFSNDVKRLLVC-T-SNTVSIFSTSTGLQISSLEGHT------APVTTVIVVPASTPATKILSYCWTASL---- 75 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~-~-~~~v~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~---- 75 (112)
.+.. ++|+|+|+.++.+ . ++.|.+||+.+++....+.... ..+..++|+|+++ ++++++.
T Consensus 44 ~~~~-~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-------~l~~~~~~~~~ 115 (349)
T 1jmx_B 44 GPGT-AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-------EVYATVNPTQR 115 (349)
T ss_dssp SSCE-EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS-------EEEEEEEEEEE
T ss_pred CCce-eEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC-------EEEEEcccccc
Confidence 3555 8999999866544 4 7999999999887665554322 2257889999995 4445554
Q ss_pred --------CCcEEEEeCCCCc---eEEEEecCCCEEEEEEcCCCc
Q 033738 76 --------DETIKYWDFSTPE---LLKTIDVKFPIFSMVRGKKGF 109 (112)
Q Consensus 76 --------d~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 109 (112)
++.+.+||+.+++ .+.....+..+.+++|+|+|+
T Consensus 116 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 116 LNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp CSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred cccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 3899999998743 334455555788899999998
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.22 E-value=3.5e-10 Score=68.11 Aligned_cols=95 Identities=11% Similarity=0.129 Sum_probs=64.7
Q ss_pred CCCeEEcCCCCEEEEEc--CCeEEEEeCCCCce------e-------eeccccCCceEEEEEecCCCCccceeEEEE-ee
Q 033738 10 SSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQ------I-------SSLEGHTAPVTTVIVVPASTPATKILSYCW-TA 73 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~ 73 (112)
.+ ++|+|||+.++.++ ++.+.+|++..... + ............++|+|+++ +++ +.
T Consensus 158 ~~-~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-------~l~v~~ 229 (361)
T 3scy_A 158 HC-VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-------FAYLIN 229 (361)
T ss_dssp EE-EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-------EEEEEE
T ss_pred eE-EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-------EEEEEc
Confidence 44 89999999776654 68999998864321 1 11122344567899999995 333 44
Q ss_pred ecCCcEEEEeCCCCceE--EEEecC----CCEEEEEEcCCCcEeC
Q 033738 74 SLDETIKYWDFSTPELL--KTIDVK----FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 74 ~~d~~i~~~~~~~~~~~--~~~~~~----~~v~~~~~~~~~~~~~ 112 (112)
..++.+.+|++.++... ..+... .....++|+|+|+++|
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 46899999999877542 223221 2467999999999774
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.19 E-value=1.3e-09 Score=66.02 Aligned_cols=104 Identities=12% Similarity=-0.075 Sum_probs=70.7
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEE--EecCCCCccceeEEEE---------
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVI--VVPASTPATKILSYCW--------- 71 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~--------- 71 (112)
++...+.. +.|+|||+.|+.++ ++.+++||+.+++.......+...+.... +++++. .++....
T Consensus 78 ~~~~~~~~-~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~---~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 78 GRGDNTFG-GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT---KLVGIEIRREDWVPLT 153 (388)
T ss_dssp SSCBCSSS-CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS---EEEEEEEEGGGCCCCC
T ss_pred CCCCCccc-eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC---eeccccccCccccccc
Confidence 34444445 89999999999888 78999999998875555544444443333 477774 2221000
Q ss_pred ---------eeecCCcEEEEeCCCCceEEEEecCCCEEEEEEcC-CCcEe
Q 033738 72 ---------TASLDETIKYWDFSTPELLKTIDVKFPIFSMVRGK-KGFAV 111 (112)
Q Consensus 72 ---------~~~~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 111 (112)
....+..|++||+.+++..........+..+.|+| +|+.|
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l 203 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTV 203 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEE
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEE
Confidence 12234679999999987766655555889999999 98765
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.18 E-value=6.1e-10 Score=67.45 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=67.8
Q ss_pred cCCCeEEcCCCCEEEEEc--CC--eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SN--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
+.. ++|+|||+.|+..+ ++ .|.+||+.+++.......+...+....|+|+++ .++....++.+++||+
T Consensus 38 ~~~-~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~-------~l~~~~~~~~l~~~d~ 109 (388)
T 3pe7_A 38 FYQ-KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD-------ALFYVKDGRNLMRVDL 109 (388)
T ss_dssp TTS-CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS-------EEEEEETTTEEEEEET
T ss_pred hcC-ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC-------EEEEEeCCCeEEEEEC
Confidence 444 78999999988776 44 589999988875554444444444678999995 5667778889999999
Q ss_pred CCCceEEEEecCC-CEEEE--EEcCCCcEe
Q 033738 85 STPELLKTIDVKF-PIFSM--VRGKKGFAV 111 (112)
Q Consensus 85 ~~~~~~~~~~~~~-~v~~~--~~~~~~~~~ 111 (112)
.+++.......+. .+... .++|++..+
T Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l 139 (388)
T 3pe7_A 110 ATLEENVVYQVPAEWVGYGTWVANSDCTKL 139 (388)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred CCCcceeeeechhhcccccceeECCCCCee
Confidence 9988776666554 33333 347887654
No 163
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.18 E-value=1.1e-10 Score=75.97 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=66.5
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+|...+.. ++|||||+.|+.+. +..|++||+.+++....-.........++|+|++. .++..+.+.
T Consensus 118 ~~~~~~~~-~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~-------~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGT-WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSK-------GFYYEWLPT 189 (695)
T ss_dssp SSCEEEEE-EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSS-------EEEEEECCC
T ss_pred CCCEEEEE-EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCC-------EEEEEEecC
Confidence 34445665 89999999998442 26899999998875411111111125789999995 444555554
Q ss_pred c-------------EEEEeCCCCce--EEEEec--C-CCEEEEEEcCCCcEe
Q 033738 78 T-------------IKYWDFSTPEL--LKTIDV--K-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 78 ~-------------i~~~~~~~~~~--~~~~~~--~-~~v~~~~~~~~~~~~ 111 (112)
. |++|++.++.. ...+.. + ..+..+.|+|+|++|
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l 241 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYL 241 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEE
Confidence 4 99999988762 223322 3 378899999999876
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.18 E-value=3e-10 Score=67.33 Aligned_cols=87 Identities=17% Similarity=0.158 Sum_probs=66.1
Q ss_pred CEEEEEc-CCeEEEEeCCCCceeeeccccCC--ceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecC
Q 033738 20 KRLLVCT-SNTVSIFSTSTGLQISSLEGHTA--PVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVK 96 (112)
Q Consensus 20 ~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 96 (112)
+++++++ ++.|.+||..+++....+..... .+..++|+|++. .++++...++.|.+||..+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~------~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGR------IAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSS------EEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCC------EEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 3567776 89999999998877766653321 467899999985 23456677899999999999888777653
Q ss_pred C------CEEEEEEcCCCcEeC
Q 033738 97 F------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 97 ~------~v~~~~~~~~~~~~~ 112 (112)
. .+..++|+|+|+.+|
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~ 97 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLA 97 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEE
T ss_pred CcccccccccceEECCCCCEEE
Confidence 3 567889999998764
No 165
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.18 E-value=4.4e-10 Score=67.33 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=65.4
Q ss_pred CCCcCCCeEEcCCCCEEEEEc----CCeEEEEeCCCCc--eeeeccccCCceEEEEEecCCCCccceeEEEEeee-cCCc
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT----SNTVSIFSTSTGL--QISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS-LDET 78 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~----~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 78 (112)
...... ++|+|||+ +++++ ++.|.+|++.++. .+..+..+...+..++|+|+++ ++++++ .++.
T Consensus 39 ~~~p~~-~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~-------~l~~~~~~~~~ 109 (347)
T 3hfq_A 39 TQNPTY-LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ-------LVYSANYHKGT 109 (347)
T ss_dssp CSCCCC-EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT-------EEEEEETTTTE
T ss_pred cCCcce-EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC-------EEEEEeCCCCE
Confidence 345566 99999999 55443 3799999997654 3334344566778999999995 444555 7899
Q ss_pred EEEEeCC-CCc--eEEEEecC----------CCEEEEEEcCCCc
Q 033738 79 IKYWDFS-TPE--LLKTIDVK----------FPIFSMVRGKKGF 109 (112)
Q Consensus 79 i~~~~~~-~~~--~~~~~~~~----------~~v~~~~~~~~~~ 109 (112)
+.+|++. ++. .+..+... ..+.+++|+|+|+
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 9999985 333 22333221 1378899999998
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=1.2e-09 Score=66.35 Aligned_cols=87 Identities=16% Similarity=0.241 Sum_probs=69.7
Q ss_pred eEEcCCCCEEEEEc------------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 13 PAFSNDVKRLLVCT------------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 13 ~~~~~~~~~l~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
++++|+++.++.+. .+.|.+||+.+++.+..+..+. ...++++|+++ ++++++. +.+.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~-------~l~v~n~-~~v~ 328 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN-------LMLTLDG-GNVN 328 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT-------EEEEECS-SCEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC-------EEEEeCC-CeEE
Confidence 68899988776542 2489999999998888887665 78999999995 4445555 9999
Q ss_pred EEeCCCC--ceEEEEe-cCCCEEEEEEcCCCc
Q 033738 81 YWDFSTP--ELLKTID-VKFPIFSMVRGKKGF 109 (112)
Q Consensus 81 ~~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~ 109 (112)
+||..++ +.+..+. .......+.++|+|.
T Consensus 329 v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 329 VYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999 8888874 445778899999986
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.18 E-value=2.4e-10 Score=74.82 Aligned_cols=90 Identities=11% Similarity=-0.052 Sum_probs=66.2
Q ss_pred eEEcCCCCEEEEEc-C---------CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 13 PAFSNDVKRLLVCT-S---------NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~---------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
..|||||+.|+.++ + +.+.+||+.+++ ...+..+...+...+|||+++ .++.+ .++.|++|
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-~~~l~~~~~~~~~~~~SPdG~-------~la~~-~~~~i~~~ 137 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGH-------KLAYV-WNNDIYVK 137 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTT-------CEEEE-ETTEEEEE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-EEEcccCCCcceeeEECCCCC-------EEEEE-ECCeEEEE
Confidence 57899999998887 3 567899999886 455666677899999999995 33344 56899999
Q ss_pred eCCCCceEEEEecCC--CE-----------------EEEEEcCCCcEe
Q 033738 83 DFSTPELLKTIDVKF--PI-----------------FSMVRGKKGFAV 111 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~--~v-----------------~~~~~~~~~~~~ 111 (112)
+..++...+...... .+ ..+.|+|||+.|
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~l 185 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFL 185 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEE
Confidence 998877544322111 12 248999999876
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.15 E-value=3.6e-10 Score=73.72 Aligned_cols=96 Identities=10% Similarity=0.046 Sum_probs=65.5
Q ss_pred CcCCCeEEcCCCCEEEEEc--CC----eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCc---
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SN----TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDET--- 78 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~----~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~--- 78 (112)
.+.. ++|||||+.|+.+. +| .|++||+.+++.......+ ..+..++|+||++ .++.+..++.
T Consensus 126 ~~~~-~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~-------~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 126 ALRG-YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK-------GMFYNAYPQQDGK 196 (710)
T ss_dssp EEEE-EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS-------EEEEEECCCCSSC
T ss_pred EEEE-EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC-------EEEEEEECCcccc
Confidence 4555 89999999998775 22 8999999988755422222 2256789999995 3334444433
Q ss_pred -------------EEEEeCCCCceE--EEEecC--C-CEEEEEEcCCCcEeC
Q 033738 79 -------------IKYWDFSTPELL--KTIDVK--F-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 -------------i~~~~~~~~~~~--~~~~~~--~-~v~~~~~~~~~~~~~ 112 (112)
|++|++.++... ...... . .+..+.|+|+|++|+
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~ 248 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVL 248 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEE
Confidence 999999877532 232322 2 578899999998763
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.11 E-value=1.5e-09 Score=69.97 Aligned_cols=101 Identities=11% Similarity=0.123 Sum_probs=67.7
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc-C--------CeEEEEeCC-CC--ceeeecc-ccCCceEEEEEecCCCCccceeEEE
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT-S--------NTVSIFSTS-TG--LQISSLE-GHTAPVTTVIVVPASTPATKILSYC 70 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~-~--------~~v~~~~~~-~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~ 70 (112)
.+...+.. ++|||||+.|+..+ + ..|++||+. ++ .....+. .+...+..++|+|++. ++
T Consensus 185 ~~~~~~~~-~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-------l~ 256 (662)
T 3azo_A 185 DAHRFVTG-PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-------LI 256 (662)
T ss_dssp SCSSEECC-CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-------EE
T ss_pred cCCCcccC-ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-------EE
Confidence 33455666 89999999998776 4 379999998 56 1233343 3467788999999994 44
Q ss_pred EeeecCC--cEEEEeCCCCceEEEEecCCC---------EEEEEEcCCCcEeC
Q 033738 71 WTASLDE--TIKYWDFSTPELLKTIDVKFP---------IFSMVRGKKGFAVF 112 (112)
Q Consensus 71 ~~~~~d~--~i~~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~ 112 (112)
+++..++ .|++||..+++.......+.. +..++|+|+++++|
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 5666777 677777766665443332221 45678888887653
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.10 E-value=1.1e-09 Score=65.41 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=62.2
Q ss_pred cCCCeEEcCCCCEEEEEc-C---C--eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeec-------
Q 033738 9 VSSPPAFSNDVKRLLVCT-S---N--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL------- 75 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~---~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------- 75 (112)
+.. ++|+|||+.|+..+ + + .|.+|++.+++... +..... +..++|+|++. .++..+.
T Consensus 61 ~~~-~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~-~~~~~wspdg~-------~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 61 ATM-PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKK-ILEAKN-IRSLEWNEDSR-------KLLIVGFKRREDED 130 (347)
T ss_dssp CEE-EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEE-EEEESE-EEEEEECTTSS-------EEEEEEECCCC---
T ss_pred CCC-eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEE-EEcCCC-ccceeECCCCC-------EEEEEEccCCCcCC
Confidence 444 89999999998776 2 3 37888888775433 333334 88999999995 2223321
Q ss_pred --------------------CCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 76 --------------------DETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 76 --------------------d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
...+++||+.+++.+..+... .+..+.|+|+| .+
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~ 184 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IV 184 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EE
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EE
Confidence 256889999888763444333 77788999998 54
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.09 E-value=9.1e-09 Score=62.30 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=67.3
Q ss_pred CCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCC-CCcee--eecc--ccCCceEEEEEecCCCCccceeEEEEeee-cCC
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTS-TGLQI--SSLE--GHTAPVTTVIVVPASTPATKILSYCWTAS-LDE 77 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~d~ 77 (112)
...+.. ++|+|||+++++++ ++.|++|+++ +++.. ..+. .+...+..++|+|+++ +++.++ .++
T Consensus 144 ~~~~~~-~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~-------~l~v~~~~~~ 215 (365)
T 1jof_A 144 NTGIHG-MVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN-------YLYALMEAGN 215 (365)
T ss_dssp TCCEEE-EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS-------EEEEEETTTT
T ss_pred CCcceE-EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC-------EEEEEECCCC
Confidence 345666 89999999887765 5899999998 66532 2232 2345678999999995 333444 578
Q ss_pred cEEEEeCC--CCceE---EEEec---C----C-------CEEEEE-EcCCCcEeC
Q 033738 78 TIKYWDFS--TPELL---KTIDV---K----F-------PIFSMV-RGKKGFAVF 112 (112)
Q Consensus 78 ~i~~~~~~--~~~~~---~~~~~---~----~-------~v~~~~-~~~~~~~~~ 112 (112)
.+.+|++. +++.. ..+.. + . .+..++ |+|+|+++|
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 99999765 46542 12221 1 1 378899 999998774
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=1.7e-08 Score=60.16 Aligned_cols=99 Identities=14% Similarity=0.013 Sum_probs=70.9
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC----CcE
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD----ETI 79 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d----~~i 79 (112)
+...+.+ ++|+++|++++++. ++.|.+||.++++...........+.++++++++. ++++...+ +.|
T Consensus 43 ~~~~~~~-~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-------l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 43 KGLQLEG-LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-------LFVCYLGDFKSTGGI 114 (333)
T ss_dssp SCCCEEE-EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-------EEEEECTTSSSCCEE
T ss_pred cCccccC-cEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-------EEEEeCCCCCCCceE
Confidence 4445565 89999999777777 79999999987764433334556789999999985 44455555 689
Q ss_pred EEEeCCCCceEEEEec---CCCEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTIDV---KFPIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~ 111 (112)
.+||..++.....+.. ...+..+.++|+|+.+
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~ 149 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY 149 (333)
T ss_dssp EEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEE
T ss_pred EEEeCCCCEEEEEEccCccCCcccceEECCCCCEE
Confidence 9999887765433321 2368899999998754
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.02 E-value=1.3e-08 Score=61.61 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=65.8
Q ss_pred cCCCeEEcCCCCE--EEEE--------------cCCeEEEEeCC-CCceeeecc----ccCCceEEEEEecCCCCcccee
Q 033738 9 VSSPPAFSNDVKR--LLVC--------------TSNTVSIFSTS-TGLQISSLE----GHTAPVTTVIVVPASTPATKIL 67 (112)
Q Consensus 9 v~~~~~~~~~~~~--l~~~--------------~~~~v~~~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~ 67 (112)
... ++++|||+. ++++ .++.+.+|++. .++....+. .+...+..++|+|+++
T Consensus 85 ~~~-~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~------ 157 (365)
T 1jof_A 85 PRA-NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET------ 157 (365)
T ss_dssp GGG-GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS------
T ss_pred Ccc-EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC------
Confidence 445 889999984 4443 46889999987 354433332 2345688999999995
Q ss_pred EEEEeee-cCCcEEEEeCC-CCceE--EEEec---CCCEEEEEEcCCCcEeC
Q 033738 68 SYCWTAS-LDETIKYWDFS-TPELL--KTIDV---KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 68 ~~~~~~~-~d~~i~~~~~~-~~~~~--~~~~~---~~~v~~~~~~~~~~~~~ 112 (112)
+++++. .++.|++|++. +++.. ..+.. ...+..++|+|+|+++|
T Consensus 158 -~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 208 (365)
T 1jof_A 158 -YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLY 208 (365)
T ss_dssp -EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred -EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEE
Confidence 333443 46799999998 67643 23331 33788999999998764
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.96 E-value=3.4e-09 Score=64.17 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=56.8
Q ss_pred CcCCCeEEcCCCCEEEEEc--C--CeEEEEeCCCCceeeeccccCCce-EEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT--S--NTVSIFSTSTGLQISSLEGHTAPV-TTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~--~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
.+.. ++|+|||+.|+... + ..+.+||+.+++. ..+....... ....|+|++. .++....++.+++|
T Consensus 37 ~~~~-~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~spdg~-------~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 37 YFYQ-KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-VQLTEGKGDNTFGGFISTDER-------AFFYVKNELNLMKV 107 (396)
T ss_dssp CTTS-CCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-EECCCSSCBCTTTCEECTTSS-------EEEEEETTTEEEEE
T ss_pred eeec-CcCCCCCCEEEEEEecCCCceEEEEECCCCcE-EEeecCCCCccccceECCCCC-------EEEEEEcCCcEEEE
Confidence 3666 89999999988764 2 4789999987764 3343333332 2378999995 56677778899999
Q ss_pred eCCCCceEEEEecC
Q 033738 83 DFSTPELLKTIDVK 96 (112)
Q Consensus 83 ~~~~~~~~~~~~~~ 96 (112)
|+.+++.......+
T Consensus 108 d~~~~~~~~~~~~~ 121 (396)
T 3c5m_A 108 DLETLEEQVIYTVD 121 (396)
T ss_dssp ETTTCCEEEEEECC
T ss_pred ECCCCCcEEEEecc
Confidence 99988766555533
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.95 E-value=3.4e-08 Score=58.06 Aligned_cols=96 Identities=7% Similarity=-0.076 Sum_probs=69.9
Q ss_pred CCCcCCCeEEcCCCC-EEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 6 RSYVSSPPAFSNDVK-RLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~-~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
.....+ ++|+|+|+ .++++. ++.|..|+..++ ...+..+...+..+++++++. ++++...++.|.+||
T Consensus 27 ~~~~eg-~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-------l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEG-PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-------LIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEE-EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-------EEEEETTTTEEEEEC
T ss_pred CccccC-CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-------EEEEecCCCeEEEEc
Confidence 344555 89999998 555666 799999999876 555555667788999999985 555666678999999
Q ss_pred CCCCceEEEEecC-----CCEEEEEEcCCCcEe
Q 033738 84 FSTPELLKTIDVK-----FPIFSMVRGKKGFAV 111 (112)
Q Consensus 84 ~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~ 111 (112)
..+++........ ..+..++++|+|+++
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~ 129 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLW 129 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEE
Confidence 9888754433221 145678999998764
No 176
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.92 E-value=8.9e-08 Score=56.52 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=70.9
Q ss_pred CCCeEEcCCCCEEEEEc--CCeEEEEeC--CCCce-----eeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 10 SSPPAFSNDVKRLLVCT--SNTVSIFST--STGLQ-----ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~--~~~v~~~~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
.. ++|+||++.++.+. ++.|..|++ .++.. ...+....+....+++.+++. ++++....+.|.
T Consensus 152 ng-i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-------lwva~~~~~~v~ 223 (297)
T 3g4e_A 152 NG-LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-------LWVACYNGGRVI 223 (297)
T ss_dssp EE-EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-------EEEEEETTTEEE
T ss_pred cc-eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-------EEEEEcCCCEEE
Confidence 44 88999998776554 689999987 34432 122223335567889999985 566767778899
Q ss_pred EEeCCCCceEEEEecCC-CEEEEEEc-CCCcEeC
Q 033738 81 YWDFSTPELLKTIDVKF-PIFSMVRG-KKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~~~~ 112 (112)
.||..+|+.+..+..+. .+.+++|. |+++.||
T Consensus 224 ~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp EECTTTCCEEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred EEcCCCceEEEEEECCCCCceEEEEeCCCCCEEE
Confidence 99999899988888774 89999998 8887764
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.90 E-value=1.4e-07 Score=55.04 Aligned_cols=95 Identities=12% Similarity=0.208 Sum_probs=69.0
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecccc--CCceEEEEEecCCCCccceeEEEEeeecCC-cEEEE
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGH--TAPVTTVIVVPASTPATKILSYCWTASLDE-TIKYW 82 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~-~i~~~ 82 (112)
..+.. ++++++|+.+++.. ++.|++||.. ++.+..+... ......+++++++. ++++...++ .|++|
T Consensus 164 ~~p~~-i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~-------l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 164 EFPNG-VVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGE-------ILIADNHNNFNLTIF 234 (286)
T ss_dssp SSEEE-EEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCC-------EEEEECSSSCEEEEE
T ss_pred CCcEE-EEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCC-------EEEEeCCCCEEEEEE
Confidence 34565 89999998777766 7999999975 4445555433 24678999999985 556666665 99999
Q ss_pred eCCCCceEEEEecCC---CEEEEEEcCCCcEe
Q 033738 83 DFSTPELLKTIDVKF---PIFSMVRGKKGFAV 111 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 111 (112)
|. +++.+..+..+. .+..++++|+|+.+
T Consensus 235 ~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~ 265 (286)
T 1q7f_A 235 TQ-DGQLISALESKVKHAQCFDVALMDDGSVV 265 (286)
T ss_dssp CT-TSCEEEEEEESSCCSCEEEEEEETTTEEE
T ss_pred CC-CCCEEEEEcccCCCCcceeEEECCCCcEE
Confidence 95 466666665443 47789999999754
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.89 E-value=5.3e-08 Score=59.85 Aligned_cols=89 Identities=13% Similarity=0.061 Sum_probs=67.1
Q ss_pred CCCCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
+.. |.. ++| |++.|+.+.++.|++||+.+......+..+...+..+.+.+. -++.+..||.+.+||+
T Consensus 87 lp~-V~~-l~f--d~~~L~v~~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p---------~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 87 IPD-VIF-VCF--HGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN---------TLVILNSVNDLSALDL 153 (388)
T ss_dssp CTT-EEE-EEE--ETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS---------EEEEEETTSEEEEEET
T ss_pred CCC-eeE-EEE--CCCEEEEEcCCcEEEEEchhhhccCccceeecceeeEEecCC---------CEEEEECCCCEEEEEc
Confidence 344 776 889 899999888899999999876555555566677777665432 1457789999999999
Q ss_pred CCCceEEEEecCCCEEEEEEcCCCc
Q 033738 85 STPELLKTIDVKFPIFSMVRGKKGF 109 (112)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~ 109 (112)
.++.... ....|.+++|+|+|.
T Consensus 154 ~~~~~~~---~~~~Vs~v~WSpkG~ 175 (388)
T 1xip_A 154 RTKSTKQ---LAQNVTSFDVTNSQL 175 (388)
T ss_dssp TTCCEEE---EEESEEEEEECSSEE
T ss_pred cCCcccc---ccCCceEEEEcCCce
Confidence 9877643 223899999999983
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.88 E-value=7.3e-09 Score=62.72 Aligned_cols=92 Identities=11% Similarity=-0.142 Sum_probs=62.1
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEE-------------------EEEecCCCCccceeEEEEe
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTT-------------------VIVVPASTPATKILSYCWT 72 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~~~~~~~~ 72 (112)
+.|+|||+.|+..+ ++.+++||+.+++.......+...... ..++|++. .++ .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~---~~~----~ 158 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS---WEK----F 158 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS---HHH----H
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc---cee----e
Confidence 78999999998887 789999999887644333323322222 24456653 111 2
Q ss_pred e-----ecCCcEEEEeCCCCceEEEEecCCCEEEEEEcC-CCcEe
Q 033738 73 A-----SLDETIKYWDFSTPELLKTIDVKFPIFSMVRGK-KGFAV 111 (112)
Q Consensus 73 ~-----~~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 111 (112)
. ..+..+++||+.+++..........+..+.|+| ++..+
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l 203 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTV 203 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEE
T ss_pred eeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEE
Confidence 1 456689999999887766665555888999999 77644
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.88 E-value=9.1e-08 Score=56.23 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=66.9
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCC-CCce---eeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTS-TGLQ---ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
..... ++|+|+|+.+++.+ ++.|.+|++. .+.. ...+....+.+..+++++++. ++++. ++.|.+
T Consensus 172 ~~~~g-i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-------l~v~~--~~~v~~ 241 (296)
T 3e5z_A 172 VKPNG-LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-------IWASA--GDGVHV 241 (296)
T ss_dssp SSEEE-EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-------EEEEE--TTEEEE
T ss_pred CCCcc-EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-------EEEEc--CCeEEE
Confidence 34455 89999999886666 7899999986 4443 223322344556889999985 44444 788999
Q ss_pred EeCCCCceEEEEecCCCEEEEEE-cCCCcEeC
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVR-GKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~ 112 (112)
||.. ++.+..+..+..+.+++| .|+++.||
T Consensus 242 ~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~ 272 (296)
T 3e5z_A 242 LTPD-GDELGRVLTPQTTSNLCFGGPEGRTLY 272 (296)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEEESTTSCEEE
T ss_pred ECCC-CCEEEEEECCCCceeEEEECCCCCEEE
Confidence 9986 777777766555888889 57877653
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.87 E-value=9e-08 Score=61.47 Aligned_cols=85 Identities=12% Similarity=0.078 Sum_probs=67.5
Q ss_pred CEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC--CCceEEEEecC
Q 033738 20 KRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS--TPELLKTIDVK 96 (112)
Q Consensus 20 ~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~--~~~~~~~~~~~ 96 (112)
..+++.. ++.|.++|..+++.+..+... ..+..+.++|+++ +++.++.++.+.+||+. +++.+..+...
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr-------~lyv~~~dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR-------YLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC-------EEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC-------EEEEEcCCCeEEEEECCCCCCcEeEEEecC
Confidence 4444555 799999999999877777643 3456899999996 55567889999999995 77888888777
Q ss_pred CCEEEEEEc----CCCcEeC
Q 033738 97 FPIFSMVRG----KKGFAVF 112 (112)
Q Consensus 97 ~~v~~~~~~----~~~~~~~ 112 (112)
.....++|+ |+|+++|
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEE
T ss_pred CCCceeEEccccCCCCCEEE
Confidence 777889999 6998875
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.86 E-value=1e-07 Score=56.04 Aligned_cols=85 Identities=14% Similarity=0.020 Sum_probs=67.1
Q ss_pred CCCEEEEEc-CCeEEEEeCCCCceeeeccccC-CceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEec
Q 033738 18 DVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT-APVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDV 95 (112)
Q Consensus 18 ~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 95 (112)
.++.|++++ ++.|.+||.++++.+..+..+. ..+..+.++|++. +++ +.++.++.||. +|+.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-------ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-------ILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-------EEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-------EEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 467788887 8999999998999888887655 3678889999995 444 34678999999 7888888876
Q ss_pred C--CCEEEEEEcCCCcEeC
Q 033738 96 K--FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 96 ~--~~v~~~~~~~~~~~~~ 112 (112)
+ ..+.++.+.++|+.++
T Consensus 74 ~~~~~~~~~~~~~dG~~lv 92 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALV 92 (276)
T ss_dssp CTTCEEEEEEECTTSCEEE
T ss_pred CCCccccccEECCCCCEEE
Confidence 5 3677888888887763
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.86 E-value=4.8e-08 Score=58.44 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=67.9
Q ss_pred CcCCCeEEcCC-CCEEEEEc-CCeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEe-------eecC
Q 033738 8 YVSSPPAFSND-VKRLLVCT-SNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWT-------ASLD 76 (112)
Q Consensus 8 ~v~~~~~~~~~-~~~l~~~~-~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~d 76 (112)
.... ++++|+ ++.+++.. ++.|++|+.++++.+..+. .+...+..++++| +. .+.+ ...+
T Consensus 197 ~p~g-ia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~-------~~~~~g~~~v~~~~~ 267 (329)
T 3fvz_A 197 VPHS-LALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF-------LFAVNGKPYFGDQEP 267 (329)
T ss_dssp CEEE-EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE-------EEEEECCCCTTCSCC
T ss_pred CCcE-EEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE-------EEEeCCCEEeccCCC
Confidence 3555 899998 55555655 7999999998787776663 3455678899998 31 2222 2334
Q ss_pred CcEEEEeCCCCceEEEEe---cCC-CEEEEEEcCCCcE
Q 033738 77 ETIKYWDFSTPELLKTID---VKF-PIFSMVRGKKGFA 110 (112)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~---~~~-~v~~~~~~~~~~~ 110 (112)
..+++|+..+++.+..+. .+. ....++++|+|..
T Consensus 268 ~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 268 VQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp CCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEE
T ss_pred cEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCE
Confidence 589999999999888874 222 6899999999954
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.83 E-value=2e-08 Score=65.94 Aligned_cols=94 Identities=15% Similarity=0.071 Sum_probs=61.6
Q ss_pred CcCCCeEEcCCCCEEEEEc--C----CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCC----
Q 033738 8 YVSSPPAFSNDVKRLLVCT--S----NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE---- 77 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~---- 77 (112)
.+.. ++|||||+.|+.+. + ..|++||+.+++.... ......+..++|+|+ + .++.+..++
T Consensus 164 ~~~~-~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~-------~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 164 ALDA-WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-D-------ALLYSRFAEPKEG 233 (741)
T ss_dssp EEEE-EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-S-------EEEEEECCCC---
T ss_pred EEEe-EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-C-------EEEEEEecCcccc
Confidence 3455 89999999998775 2 3699999998875432 111222346789999 6 333333332
Q ss_pred ----------cEEEEeCCCCce--EEEEecCC---CEEEEEEcCCCcEe
Q 033738 78 ----------TIKYWDFSTPEL--LKTIDVKF---PIFSMVRGKKGFAV 111 (112)
Q Consensus 78 ----------~i~~~~~~~~~~--~~~~~~~~---~v~~~~~~~~~~~~ 111 (112)
.|++|++.++.. ...+.... .+..+.|+|||++|
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l 282 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWV 282 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEE
Confidence 488999877652 22333222 48889999999876
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.79 E-value=5.2e-07 Score=52.66 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=69.3
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
..+.. ++++|+|+.+++.. ++.|.+||.. ++....+. .+...+..+++++++. ++++...++.|++||
T Consensus 121 ~~~~~-i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-------l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 121 QHPRG-VTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-------IFISDNRAHCVKVFN 191 (286)
T ss_dssp SCEEE-EEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-------EEEEEGGGTEEEEEE
T ss_pred CCceE-EEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-------EEEEECCCCEEEEEc
Confidence 34555 88999998777776 7899999965 44444443 2334578999999984 566777789999999
Q ss_pred CCCCceEEEEecC---CCEEEEEEcCCCcEe
Q 033738 84 FSTPELLKTIDVK---FPIFSMVRGKKGFAV 111 (112)
Q Consensus 84 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~~ 111 (112)
.. ++.+..+... .....++++++|+++
T Consensus 192 ~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 192 YE-GQYLRQIGGEGITNYPIGVGINSNGEIL 221 (286)
T ss_dssp TT-CCEEEEESCTTTSCSEEEEEECTTCCEE
T ss_pred CC-CCEEEEEccCCccCCCcEEEECCCCCEE
Confidence 74 5666666543 368889999998754
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.79 E-value=3.9e-07 Score=54.53 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=70.7
Q ss_pred CCCcCCCeEEcCCCCEEEEEc-C------------------------CeEEEEeCCCCceeeecc-ccCCceEEEEEecC
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT-S------------------------NTVSIFSTSTGLQISSLE-GHTAPVTTVIVVPA 59 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~-~------------------------~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 59 (112)
.+.+.+ ++++|+|+.+++.. + +.|.+||..+++....+. .+......++++++
T Consensus 23 l~~v~~-va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSG-VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEE-EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceE-EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 345666 99999999998877 5 369999998887665443 23346789999999
Q ss_pred CCCccceeEEEEeeecCCcEEEEeCCCCc-eEEEEe---------cCC-CEEEEEEcC-CCcEe
Q 033738 60 STPATKILSYCWTASLDETIKYWDFSTPE-LLKTID---------VKF-PIFSMVRGK-KGFAV 111 (112)
Q Consensus 60 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~---------~~~-~v~~~~~~~-~~~~~ 111 (112)
+. ++++...++.|++||..... .+..+. .+. ....++++| +|..+
T Consensus 102 g~-------l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 102 GN-------YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp SC-------EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred CC-------EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 95 66788888999999976432 445542 112 578899999 66643
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.79 E-value=3.5e-08 Score=59.91 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=63.7
Q ss_pred CCCCEEEEEc-------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeee----------cCCcE
Q 033738 17 NDVKRLLVCT-------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS----------LDETI 79 (112)
Q Consensus 17 ~~~~~l~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----------~d~~i 79 (112)
+++++++... |+.+.+||..+++.+..+.....+ .++++|+++ +++.++ .++.|
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~-------~lyv~~~~~~~~~~g~~~~~v 83 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGK-------KIYTMTTYHERITRGKRSDVV 83 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSS-------EEEEEEEEETTSSSSCEEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCC-------EEEEEEecccccccCCCCCEE
Confidence 3566666542 469999999988877777655444 899999995 333333 35679
Q ss_pred EEEeCCCCceEEEEecC-------CCEEEEEEcCCCcEeC
Q 033738 80 KYWDFSTPELLKTIDVK-------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~ 112 (112)
.+||..+++.+..+... .....++++|+|+++|
T Consensus 84 ~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 84 EVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 99999988888877643 2456789999999875
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.76 E-value=8.2e-07 Score=52.85 Aligned_cols=98 Identities=5% Similarity=-0.023 Sum_probs=64.5
Q ss_pred CCCcCCCeEEcCCCCEEEEEc-C----CeEEEEeCCCCceeeecc--ccCCceEEEEEecCCCCccceeEEEEeeec---
Q 033738 6 RSYVSSPPAFSNDVKRLLVCT-S----NTVSIFSTSTGLQISSLE--GHTAPVTTVIVVPASTPATKILSYCWTASL--- 75 (112)
Q Consensus 6 ~~~v~~~~~~~~~~~~l~~~~-~----~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (112)
...+.. ++++|+|+++++.. + +.|.+||.+++.....+. .....+..++++|++. ++++...
T Consensus 86 ~~~~~~-i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-------l~v~~~~~~~ 157 (333)
T 2dg1_A 86 KANPAA-IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-------FYFTDFRGYS 157 (333)
T ss_dssp SSSEEE-EEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-------EEEEECCCBT
T ss_pred CCCcce-EEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-------EEEEeccccc
Confidence 445666 89999999887776 4 589999988765332222 2345678999999985 4444432
Q ss_pred ---CCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 76 ---DETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 76 ---d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
.+.+..+|...++.............++|+|+|+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence 345666676655544333333367889999998755
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.74 E-value=1.8e-07 Score=55.91 Aligned_cols=87 Identities=16% Similarity=0.088 Sum_probs=60.4
Q ss_pred cCCCeEEcCCCCEEEEEc----------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC--
Q 033738 9 VSSPPAFSNDVKRLLVCT----------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-- 76 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-- 76 (112)
+.. +.+ ||+.++... +..|.+||+.+++. ..+ ..+...+|+|++. .++....+
T Consensus 17 ~~~-~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l----~~~~~~~~SpDg~-------~la~~~~~~~ 81 (347)
T 2gop_A 17 LSD-PRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI----ENATMPRISPDGK-------KIAFMRANEE 81 (347)
T ss_dssp EEE-EEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE----ESCEEEEECTTSS-------EEEEEEEETT
T ss_pred ccc-ceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc----ccCCCeEECCCCC-------EEEEEEeccC
Confidence 344 666 888887542 35789999987753 333 4567899999995 33333322
Q ss_pred -C--cEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 77 -E--TIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 -~--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+ .|++|++.+++.......+. +..+.|+|+|+.|
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l 118 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKL 118 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEE
T ss_pred CCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEE
Confidence 3 48888988887766655555 8999999999866
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.72 E-value=3.4e-07 Score=59.91 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=60.4
Q ss_pred cCCCeEEcCCCCEEEEEc-CCe----------------EEEEeCCCCcee--eecc--ccCCceEEEEEecCCCCcccee
Q 033738 9 VSSPPAFSNDVKRLLVCT-SNT----------------VSIFSTSTGLQI--SSLE--GHTAPVTTVIVVPASTPATKIL 67 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~~~----------------v~~~~~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~~ 67 (112)
+.. ++|+|||+.|+.++ ++. |++|++.++... ..+. .+...+..+.|+|+++ .++
T Consensus 173 ~~~-~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~---~l~ 248 (710)
T 2xdw_A 173 FSC-MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR---YVL 248 (710)
T ss_dssp SCC-EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC---EEE
T ss_pred cce-EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC---EEE
Confidence 455 99999999998876 544 999999876521 2222 2344567899999995 222
Q ss_pred EEEEeeec--CCcEEEEeCCC------Cc-eEEEEecCC-CEEEEEEcCCCcEe
Q 033738 68 SYCWTASL--DETIKYWDFST------PE-LLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 68 ~~~~~~~~--d~~i~~~~~~~------~~-~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+....+. +..+++||+.+ +. ....+..+. .+.. .|+|+|+.+
T Consensus 249 -~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l 300 (710)
T 2xdw_A 249 -LSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVF 300 (710)
T ss_dssp -EEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEE
T ss_pred -EEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEE
Confidence 1111111 57899999876 43 344444433 3333 477777755
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.71 E-value=4.3e-07 Score=59.35 Aligned_cols=91 Identities=9% Similarity=0.068 Sum_probs=57.2
Q ss_pred CCCeEEcCCCCEEEEEc-CCe-------------EEEEeCCCCce----eeeccccCCceEEEEEecCCCCccceeEEEE
Q 033738 10 SSPPAFSNDVKRLLVCT-SNT-------------VSIFSTSTGLQ----ISSLEGHTAPVTTVIVVPASTPATKILSYCW 71 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~-~~~-------------v~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 71 (112)
.. ++|+|||+.|+.++ +.. |++|++.++.. +.....+...+..+.|+|+++ +++
T Consensus 171 ~~-~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~-------~l~ 242 (695)
T 2bkl_A 171 AT-PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK-------YLF 242 (695)
T ss_dssp CC-CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC-------CEE
T ss_pred cc-eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC-------EEE
Confidence 44 89999999998887 554 99999987652 222233445678999999995 333
Q ss_pred eeecCC----cEEEEeCCCCceEEEEecCCCEEEEEEcCCCc
Q 033738 72 TASLDE----TIKYWDFSTPELLKTIDVKFPIFSMVRGKKGF 109 (112)
Q Consensus 72 ~~~~d~----~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 109 (112)
..+.++ .+++++..++................+ ++|.
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~ 283 (695)
T 2bkl_A 243 VYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR 283 (695)
T ss_dssp EEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE
T ss_pred EEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc
Confidence 433333 677777665554333333334444445 4554
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.70 E-value=7.5e-07 Score=52.47 Aligned_cols=92 Identities=8% Similarity=-0.037 Sum_probs=66.1
Q ss_pred eEEc----CCCCEEEEE-c-CCeEEEEeCC-CCc-----eeeeccccC-CceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 13 PAFS----NDVKRLLVC-T-SNTVSIFSTS-TGL-----QISSLEGHT-APVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 13 ~~~~----~~~~~l~~~-~-~~~v~~~~~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
++++ |+++.++.+ . ++.|.+|+.+ .+. ....+..+. .....+++++++. ++++...++.|
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-------l~v~~~~~~~i 249 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-------LLVANWGSSHI 249 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-------EEEEEETTTEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-------EEEEEcCCCEE
Confidence 7888 998766555 4 6899999976 342 122233332 4567899999985 55666678899
Q ss_pred EEEeCCCCceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 80 KYWDFSTPELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
..||..+++.+..+..+ ..+.+++++|+|+.+
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l 282 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTI 282 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEE
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEE
Confidence 99999877776666665 478999999999854
No 193
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.70 E-value=2.6e-06 Score=50.98 Aligned_cols=94 Identities=11% Similarity=0.000 Sum_probs=65.9
Q ss_pred CCCeEEcCCCCEEEEEc--CCeEEEEeCC--CC-ce-----eeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 10 SSPPAFSNDVKRLLVCT--SNTVSIFSTS--TG-LQ-----ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~--~~~v~~~~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
.. ++|+||++.++.+. ++.|.+|+.+ ++ .. ...+.........+++.+++. ++++...++.|
T Consensus 182 ~~-i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-------lwva~~~~~~v 253 (326)
T 2ghs_A 182 NS-ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-------IWNARWGEGAV 253 (326)
T ss_dssp EE-EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-------EEEEEETTTEE
T ss_pred CC-eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-------EEEEEeCCCEE
Confidence 44 88999998776554 6899999985 45 21 122222334557888888884 45555566789
Q ss_pred EEEeCCCCceEEEEecCC-CEEEEEEc-CCCcEeC
Q 033738 80 KYWDFSTPELLKTIDVKF-PIFSMVRG-KKGFAVF 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~~~~ 112 (112)
..||. +++.+..+..+. .+.+++|. ++++.+|
T Consensus 254 ~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 254 DRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp EEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEE
T ss_pred EEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEE
Confidence 99998 577777777665 78999998 8877653
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.66 E-value=3.1e-06 Score=48.84 Aligned_cols=96 Identities=10% Similarity=-0.095 Sum_probs=66.7
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
.... ++++++|+.+++.. ++.|.+|+...................+++++++. ++++...++.|.+|+...
T Consensus 151 ~p~~-i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-------l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 151 DPDG-VAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-------VYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp SCCC-EEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-------EEEEETTTSCEEEECTTC
T ss_pred Ccee-EEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCC-------EEEEECCCCcEEEEcCCC
Confidence 4566 89999998766666 68999999876543332222335678999999884 556666788999999875
Q ss_pred CceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 87 PELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 87 ~~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
.........+ ..+.+++++++|+.+
T Consensus 223 ~~~~~~~~~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 223 TTSTVLPFTGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp SCCEECCCCSCSCEEEEEECTTCCEE
T ss_pred CcceeeccCCCCCceeEEECCCCCEE
Confidence 4433222122 368899999998743
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.66 E-value=3.5e-07 Score=56.29 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=64.2
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
|...+.. +.+.+. .++.++ ||.+.+||+..+.... ....|.+++|+|++ + +.+..|+.+++|+
T Consensus 125 ~~~~v~~-i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--------~-~vg~~dg~i~~~~ 188 (388)
T 1xip_A 125 FEKPVFQ-LKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--------L-AVLLKDRSFQSFA 188 (388)
T ss_dssp CSSCEEE-EEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--------E-EEEETTSCEEEEE
T ss_pred eecceee-EEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--------e-EEEEcCCcEEEEc
Confidence 3344544 555543 266565 9999999998776432 33579999999998 2 3678899999998
Q ss_pred CCCCce--EEEE------e----cCCCEEEEEEcCCCcEe
Q 033738 84 FSTPEL--LKTI------D----VKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 84 ~~~~~~--~~~~------~----~~~~v~~~~~~~~~~~~ 111 (112)
...++. ..++ . ....|.++.|.+++.++
T Consensus 189 ~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl 228 (388)
T 1xip_A 189 WRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL 228 (388)
T ss_dssp EETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred CCCccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence 877665 4555 2 12379999999988765
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.63 E-value=3.7e-06 Score=54.13 Aligned_cols=92 Identities=10% Similarity=-0.030 Sum_probs=67.5
Q ss_pred CCCeEEcCCCCEEEEEc-CCeEEEEeCC--CCceeeeccccCCceEEEEEe----cCCCCccceeEEEEeeecCCcEEEE
Q 033738 10 SSPPAFSNDVKRLLVCT-SNTVSIFSTS--TGLQISSLEGHTAPVTTVIVV----PASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~-~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
.. +.++|||+++++++ ++.|.+||+. +.+.+..+.... ....++++ |+++ -.+++...++.+.++
T Consensus 200 ~~-v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk------~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 200 HI-SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDK------YAIAGAYWPPQYVIM 271 (567)
T ss_dssp EE-EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTT------EEEEEEEETTEEEEE
T ss_pred cc-eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCC------EEEEEEccCCeEEEE
Confidence 45 88999999998888 8999999995 677666666433 35789999 6885 233455667999999
Q ss_pred eCCCCceEEEEecC-----------C-CEEEEEEcCCCc
Q 033738 83 DFSTPELLKTIDVK-----------F-PIFSMVRGKKGF 109 (112)
Q Consensus 83 ~~~~~~~~~~~~~~-----------~-~v~~~~~~~~~~ 109 (112)
|..+.+.+..+... . .+..+..++++.
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 99998888776532 1 455666666543
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.62 E-value=3.4e-07 Score=56.29 Aligned_cols=93 Identities=15% Similarity=0.137 Sum_probs=68.7
Q ss_pred eEEcCCCCEEEEEc------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee--------ecCCc
Q 033738 13 PAFSNDVKRLLVCT------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA--------SLDET 78 (112)
Q Consensus 13 ~~~~~~~~~l~~~~------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------~~d~~ 78 (112)
....|+++.++... ++.|.++|..+++.+..+.....+ . ++++|+++ .+ |++.. ..++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~---~l--yVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGS---FI--AHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSS---CE--EEEEEEEEETTEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCC---EE--EEEcccccccccCCCCCE
Confidence 34578998888764 368999999999888888765555 4 99999995 22 22221 23578
Q ss_pred EEEEeCCCCceEEEEecCC--------CEEEEEEcCCCcEeC
Q 033738 79 IKYWDFSTPELLKTIDVKF--------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~ 112 (112)
+.+||..+.+.+..+..+. ....+.++|||+++|
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEE
Confidence 9999999999888876431 456789999999775
No 198
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.61 E-value=2.1e-07 Score=60.91 Aligned_cols=97 Identities=8% Similarity=0.121 Sum_probs=61.5
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc--C----CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC--
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT--S----NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-- 76 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~--~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-- 76 (112)
|...+.. ++|||||++++.+. . ..|+++|+.+++.... .........++|+ |++ .++....+
T Consensus 127 ~~~~l~~-~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~-------~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQ-LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNE-------GFFYSSYDKP 196 (693)
T ss_dssp SCCEEEE-EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTT-------EEEEEESSCC
T ss_pred CcEEEEE-EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCC-------EEEEEEecCc
Confidence 4444555 89999999988543 1 5799999999875432 1111112467899 885 22233333
Q ss_pred -----------CcEEEEeCCCCce--EEEEec---C-CCEEEEEEcCCCcEe
Q 033738 77 -----------ETIKYWDFSTPEL--LKTIDV---K-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 -----------~~i~~~~~~~~~~--~~~~~~---~-~~v~~~~~~~~~~~~ 111 (112)
..|++|++.++.. ...+.. + .....+.|+|||++|
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l 248 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFL 248 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEE
Confidence 4599999877543 233322 2 257789999999876
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.56 E-value=2.8e-06 Score=50.86 Aligned_cols=95 Identities=11% Similarity=-0.042 Sum_probs=66.2
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC---------
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD--------- 76 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d--------- 76 (112)
.... +++ .+++.+++.. ++.|.++|+++++....+.... ....++++|+++ +++++..+
T Consensus 132 ~p~~-i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~-------l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 132 STEQ-MVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNK-------MWTITDGGYEGSPYGYE 201 (328)
T ss_dssp BCCC-EEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSE-------EEEEBCCBCTTCSSCBC
T ss_pred Ccce-EEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCC-------EEEEECCCccCCccccC
Confidence 3444 666 3444444442 6899999999887766665432 346788899884 44444433
Q ss_pred -CcEEEEeCCCCceEEEEecC--CCEEEEEEcCCCcEeC
Q 033738 77 -ETIKYWDFSTPELLKTIDVK--FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 77 -~~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 112 (112)
+.+.++|..+++....+..+ .....++++|+++.+|
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred CceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 78999999988887777653 3688999999998775
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.54 E-value=8.7e-06 Score=47.79 Aligned_cols=90 Identities=6% Similarity=0.014 Sum_probs=68.2
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEE
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 91 (112)
++..++|+.+++.. ++.|..||.+ ++.+..+... .....+...+++. +++++..++.+..+|..+|+.+.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~-------~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD-------CLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC-------EEEECBTTSEEEEECTTTCCEEE
T ss_pred ceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC-------EEEEeCCCCeEEEEeCcCCcEEE
Confidence 67889999999887 8999999988 8877777654 3345667778885 66677778899999999999888
Q ss_pred EEecCC-------CEEEEEEcCCCcEe
Q 033738 92 TIDVKF-------PIFSMVRGKKGFAV 111 (112)
Q Consensus 92 ~~~~~~-------~v~~~~~~~~~~~~ 111 (112)
.+.... .+..+...++|+.+
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred EecCCCCCCccccccccceEcCCCCEE
Confidence 875321 25666667777654
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.53 E-value=4.8e-06 Score=50.96 Aligned_cols=88 Identities=11% Similarity=0.117 Sum_probs=63.4
Q ss_pred cCCCCEEEEEc--C-C---eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeee----------cCCcE
Q 033738 16 SNDVKRLLVCT--S-N---TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS----------LDETI 79 (112)
Q Consensus 16 ~~~~~~l~~~~--~-~---~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----------~d~~i 79 (112)
.|+++.++... . . .|.++|..+++.+..+.....+ .++++|+++ .++.+. .++.+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~-------~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGS-------EFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCC-------EEEEEeccccccccCCCCCeE
Confidence 47787766554 2 2 8899999998877777654443 899999995 222332 36789
Q ss_pred EEEeCCCCceEEEEecC--------CCEEEEEEcCCCcEeC
Q 033738 80 KYWDFSTPELLKTIDVK--------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~ 112 (112)
.++|..+.+.+..+... .....+.++|+|+++|
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLL 140 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEE
Confidence 99999988887776543 2345789999999875
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.50 E-value=7.8e-07 Score=55.38 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=65.5
Q ss_pred CCCCEEEEEc--C----CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee---------ecCCcEEE
Q 033738 17 NDVKRLLVCT--S----NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA---------SLDETIKY 81 (112)
Q Consensus 17 ~~~~~l~~~~--~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------~~d~~i~~ 81 (112)
++++.++... + +.|.++|..+.+.+..+.....+ .++++|+++ ++ +++. ..++.|.+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk---~l---yVan~~~~~~~~G~~~~~Vsv 153 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGS---FF---AQASTVFERIARGKRTDYVEV 153 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSS---CE---EEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCC---EE---EEEeccccccccCCCCCEEEE
Confidence 5677666554 3 69999999999888888765555 899999995 22 2232 14678999
Q ss_pred EeCCCCceEEEEecC--------CCEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDVK--------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~ 112 (112)
+|..+++.+..+... .....+.++|||+++|
T Consensus 154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ly 192 (426)
T 3c75_H 154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLL 192 (426)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEE
T ss_pred EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEE
Confidence 999999988887653 2345688999998875
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.47 E-value=1e-05 Score=46.66 Aligned_cols=95 Identities=6% Similarity=-0.126 Sum_probs=63.0
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeecc-ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLE-GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
..+.. ++++++|+.+++..++.|..||..... ...+. ........+++.+++. ++++...++.|..|+..
T Consensus 67 ~~p~~-i~~~~~g~l~v~~~~~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~-------l~v~~~~~~~i~~~~~~ 137 (270)
T 1rwi_B 67 YQPQG-LAVDGAGTVYVTDFNNRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGA-------VYVADRGNNRVVKLAAG 137 (270)
T ss_dssp CSCCC-EEECTTCCEEEEETTTEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCC-------EEEEEGGGTEEEEECTT
T ss_pred CCcce-eEECCCCCEEEEcCCCEEEEEeCCCce-EeeeecCCcCCCcceEECCCCC-------EEEEECCCCEEEEEECC
Confidence 35566 899999986655557899999987553 33332 2234578999999884 55566677889999765
Q ss_pred CCceEEEEecC-CCEEEEEEcCCCcE
Q 033738 86 TPELLKTIDVK-FPIFSMVRGKKGFA 110 (112)
Q Consensus 86 ~~~~~~~~~~~-~~v~~~~~~~~~~~ 110 (112)
+.......... .....++++++|+.
T Consensus 138 ~~~~~~~~~~~~~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 138 SKTQTVLPFTGLNDPDGVAVDNSGNV 163 (270)
T ss_dssp CCSCEECCCCSCCSCCCEEECTTCCE
T ss_pred CceeEeeccccCCCceeEEEeCCCCE
Confidence 54332222222 25677888888874
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.47 E-value=1.2e-05 Score=49.13 Aligned_cols=76 Identities=11% Similarity=0.041 Sum_probs=54.7
Q ss_pred CCeEEcCCCCEEEEEc-----------CCeEEEEeCCCCceeeecccc-------CCceEEEEEecCCCCccceeEEEEe
Q 033738 11 SPPAFSNDVKRLLVCT-----------SNTVSIFSTSTGLQISSLEGH-------TAPVTTVIVVPASTPATKILSYCWT 72 (112)
Q Consensus 11 ~~~~~~~~~~~l~~~~-----------~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~ 72 (112)
. +.++|||+.++.+. ++.|.++|..+.+.+..+... ......++++|+++ +++.
T Consensus 70 ~-i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~-------~l~v 141 (373)
T 2mad_H 70 N-PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA-------DLLF 141 (373)
T ss_pred C-eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC-------EEEE
Confidence 5 89999999988774 467999999887766555322 12235789999995 4334
Q ss_pred ee--cCCcEEEEeCCCCceEEE-Eec
Q 033738 73 AS--LDETIKYWDFSTPELLKT-IDV 95 (112)
Q Consensus 73 ~~--~d~~i~~~~~~~~~~~~~-~~~ 95 (112)
++ .+..|.++| .+++.+.. +..
T Consensus 142 ~n~~~~~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 142 FQFAAGPAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred EecCCCCeEEEEE-CCCCEEeEEcCC
Confidence 44 257899999 99888777 543
No 205
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=9.4e-06 Score=48.88 Aligned_cols=101 Identities=7% Similarity=-0.070 Sum_probs=67.9
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc------CCeEEEEeCCCCceeeeccc------cCCceEEEEEecCCCCccceeEEEEe
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT------SNTVSIFSTSTGLQISSLEG------HTAPVTTVIVVPASTPATKILSYCWT 72 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~------~~~v~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~ 72 (112)
|...+.. ++++++|+++++-. +..|.+||+.+++.+..+.. +......+++++++. .++++
T Consensus 65 ~~~~p~g-v~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g------~~yvt 137 (343)
T 2qe8_A 65 TFDTVLG-IKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHN------FVYIS 137 (343)
T ss_dssp CCSCEEE-EEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTT------EEEEE
T ss_pred ceeEeeE-EEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCC------EEEEE
Confidence 3456666 89999987666543 37899999988875554432 123457889997643 23445
Q ss_pred ee---cCCcEEEEeCCCCceEEEEecC------------------------------CCEEEEEEcCCCcEeC
Q 033738 73 AS---LDETIKYWDFSTPELLKTIDVK------------------------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 73 ~~---~d~~i~~~~~~~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~~~ 112 (112)
.. .++.|.+||..+++....+..+ ..+..++|+|+|+.+|
T Consensus 138 d~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY 210 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE
T ss_pred cCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEE
Confidence 55 6789999999877665544221 1357899999998664
No 206
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=2.2e-06 Score=52.48 Aligned_cols=77 Identities=6% Similarity=0.032 Sum_probs=59.0
Q ss_pred eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee--------ecCCcEEEEeCCCCceEEEEecC----
Q 033738 29 TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA--------SLDETIKYWDFSTPELLKTIDVK---- 96 (112)
Q Consensus 29 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------~~d~~i~~~~~~~~~~~~~~~~~---- 96 (112)
.+.++|..+++.+..+.....+ .+.++|+++ ++ |+... ..++.|.+||..+++.+.++..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~---~l--yVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGS---DF--ALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSS---CE--EEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCC---EE--EEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 8889999999988888766666 799999995 11 22221 24678999999999999888754
Q ss_pred ----CCEEEEEEcCCCcEeC
Q 033738 97 ----FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 97 ----~~v~~~~~~~~~~~~~ 112 (112)
.....++++|||+++|
T Consensus 120 ~~~g~~P~~ia~SpDGk~ly 139 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLL 139 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEE
T ss_pred cccCCCcceEEEcCCCCEEE
Confidence 2356789999998775
No 207
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.43 E-value=1.1e-05 Score=47.33 Aligned_cols=92 Identities=11% Similarity=-0.023 Sum_probs=68.7
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccC--C---ceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT--A---PVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+++||+.++.+. ++.+.++|.++.+....+.... . ..+.+++. ++. ++++...++.|.+.|..+
T Consensus 110 ~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-------lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 110 WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-------VWANIWQTDCIARISAKD 181 (266)
T ss_dssp CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-------EEEEETTSSEEEEEETTT
T ss_pred EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-------EEEecCCCCeEEEEECCC
Confidence 56788888777776 7899999999887776665322 1 34577777 553 445666678999999999
Q ss_pred CceEEEEecC--------------CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK--------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~--------------~~v~~~~~~~~~~~~~ 112 (112)
++.+..+... .....++|+|+++.+|
T Consensus 182 g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 182 GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEE
Confidence 9998888653 2458899999998765
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.42 E-value=5.1e-06 Score=50.85 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=66.6
Q ss_pred eEEcCCCCEEEEE-c-C--------CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeee-cCCcEEE
Q 033738 13 PAFSNDVKRLLVC-T-S--------NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS-LDETIKY 81 (112)
Q Consensus 13 ~~~~~~~~~l~~~-~-~--------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~ 81 (112)
+.++||++.++.+ . + +.+.++|+.+.+.+..+.... ....++++|+++ -.+++.. .++.+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~------~l~va~~~~~~~VsV 341 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGA------SDNYANSAGTEVLDI 341 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSS------CEEEEEETTTTEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCC------EEEEEccCCCCeEEE
Confidence 6789999887754 2 2 356799999998888776543 468999999984 1344666 5899999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcC
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGK 106 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (112)
+|..+++.+..+..+.....+++.+
T Consensus 342 ID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 342 YDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EESSSCEEEEECCCCSCCCEEECCC
T ss_pred EECCCCcEEEEEECCCCCCEEEeec
Confidence 9999999999998777666676654
No 209
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.37 E-value=6.7e-06 Score=49.25 Aligned_cols=94 Identities=13% Similarity=0.030 Sum_probs=64.6
Q ss_pred cCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccC-----CceEEEEEecCCCCccceeEEEEeee-cCCcEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT-----APVTTVIVVPASTPATKILSYCWTAS-LDETIKY 81 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~ 81 (112)
... ++++++++.+++.. ++.|.+||..+++....+.... .....+++ .++. ++++.. .++.|.+
T Consensus 86 p~~-i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~-------lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 86 PRY-IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKY-------VYVNCWSYQNRILK 156 (328)
T ss_dssp EEE-EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTE-------EEEEECTTCCEEEE
T ss_pred CcE-EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCE-------EEEEcCCCCCEEEE
Confidence 344 78888885555553 7999999999887665554332 13446666 3442 333443 4889999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcCCCcEe
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 111 (112)
+|..+++.+..+........+.++|+|+.+
T Consensus 157 iD~~t~~~~~~i~~g~~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 157 IDTETDKVVDELTIGIQPTSLVMDKYNKMW 186 (328)
T ss_dssp EETTTTEEEEEEECSSCBCCCEECTTSEEE
T ss_pred EECCCCeEEEEEEcCCCccceEEcCCCCEE
Confidence 999999888888766566778888888754
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.37 E-value=5.8e-05 Score=43.90 Aligned_cols=96 Identities=14% Similarity=0.096 Sum_probs=66.0
Q ss_pred CCCCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceee-eccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 5 GRSYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQIS-SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 5 h~~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
+...+.+ ++++++|+..++.. ++.|..||.. ++... ........+..+++.+++. ++++...++.+..|
T Consensus 13 ~~~~~~~-i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-------l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYG-ITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-------VWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEE-EEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-------EEEEETTTTEEEEE
T ss_pred cCCCccc-eEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-------EEEeCCCCCeEEEE
Confidence 4456666 89999999887776 7899999988 54322 2222345678999999884 55566667889999
Q ss_pred eCCCCceEEEEec---CCCEEEEEEcCCCcEe
Q 033738 83 DFSTPELLKTIDV---KFPIFSMVRGKKGFAV 111 (112)
Q Consensus 83 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~ 111 (112)
|.. +.. ..+.. ...+..+++.++|..+
T Consensus 84 ~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~ 113 (299)
T 2z2n_A 84 TKK-GII-KEYTLPNPDSAPYGITEGPNGDIW 113 (299)
T ss_dssp CTT-SCE-EEEECSSTTCCEEEEEECTTSCEE
T ss_pred CCC-CcE-EEEeCCCcCCCceeeEECCCCCEE
Confidence 976 433 33332 2378888888888653
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.33 E-value=5.8e-05 Score=44.49 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=61.2
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceE
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 90 (112)
+.|+|+++.|+... ++.|..||..+++. ..+. ....+.++++++++. ++++. +..+.+||..+++..
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-------l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-------YVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-------EEEEE--TTEEEEEETTTTEEE
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-------EEEEE--CCeEEEEECCCCcEE
Confidence 88999776665554 69999999987653 3332 345688999999984 33332 568999999877654
Q ss_pred EEEecC-----CCEEEEEEcCCCcEe
Q 033738 91 KTIDVK-----FPIFSMVRGKKGFAV 111 (112)
Q Consensus 91 ~~~~~~-----~~v~~~~~~~~~~~~ 111 (112)
...... ..+..+++.|+|+++
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~ 112 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYF 112 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEE
Confidence 333321 157889999999854
No 212
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.31 E-value=1.7e-06 Score=55.76 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=66.7
Q ss_pred CCCeEEcCCCCEEEEEc--CCeEEEEeCCCCc------------eeeeccccCCceEEEEEecCCCCccceeEEEEeeec
Q 033738 10 SSPPAFSNDVKRLLVCT--SNTVSIFSTSTGL------------QISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL 75 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 75 (112)
.+ +.++|||++++.++ +..|.++|+.+.+ ....+.. ......++|++++. .+.+...
T Consensus 280 hG-v~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~-------aY~t~~l 350 (595)
T 1fwx_A 280 HG-CNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGN-------AYTSLFL 350 (595)
T ss_dssp CC-EEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSE-------EEEEETT
T ss_pred eE-EEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCe-------EEEEEec
Confidence 44 89999999988887 7999999998652 2233332 34457889999983 4557788
Q ss_pred CCcEEEEeCCC----------CceEEEEecCCCE------EEEEEcCCCcEeC
Q 033738 76 DETIKYWDFST----------PELLKTIDVKFPI------FSMVRGKKGFAVF 112 (112)
Q Consensus 76 d~~i~~~~~~~----------~~~~~~~~~~~~v------~~~~~~~~~~~~~ 112 (112)
|+++.+||+.+ ...+.++..+... ..+..+|||+++|
T Consensus 351 dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 351 DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 99999999876 4566666665432 1224468888775
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.30 E-value=1.4e-05 Score=49.22 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=67.9
Q ss_pred eEEcCCCCEEEEEc-----------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 13 PAFSNDVKRLLVCT-----------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
+.++++++.++... .+.|.++|+.+++.+..+... .++..++++++++ .. ++++...++.+.+
T Consensus 285 ~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~--~~---ly~tn~~~~~VsV 358 (386)
T 3sjl_D 285 VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEK--PL---LYALSTGDKTLYI 358 (386)
T ss_dssp EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSS--CE---EEEEETTTTEEEE
T ss_pred eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCC--eE---EEEEcCCCCeEEE
Confidence 67888888877652 157999999999888877643 3567999999983 11 2334556899999
Q ss_pred EeCCCCceEEEEecCCCEEEEEEcCC
Q 033738 82 WDFSTPELLKTIDVKFPIFSMVRGKK 107 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (112)
+|..+++.+..+.....-..+.+++|
T Consensus 359 iD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 359 HDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EECCCCcEEEEecCCCCCceeEECCc
Confidence 99999999999988776666777766
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.29 E-value=2.5e-05 Score=51.53 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=55.9
Q ss_pred CCCeEEcCCCCEEEEEc-CC--------------eEEEEeCCCCce--eeecc--ccCCceEEEEEecCCCCccceeEEE
Q 033738 10 SSPPAFSNDVKRLLVCT-SN--------------TVSIFSTSTGLQ--ISSLE--GHTAPVTTVIVVPASTPATKILSYC 70 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~-~~--------------~v~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~ 70 (112)
.. ++|+|| +.|+.++ ++ .|++|++.++.. ...+. .+...+..+.|+|+++ ++
T Consensus 212 ~~-~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-------~l 282 (741)
T 1yr2_A 212 SG-LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-------WV 282 (741)
T ss_dssp CC-CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-------EE
T ss_pred cc-EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-------EE
Confidence 44 899999 9888776 43 388999876542 12222 2223478899999995 33
Q ss_pred Eeeec-----CCcEEEEeCCCC--ceEEEEecCC-CEEEEEEcCCCcEe
Q 033738 71 WTASL-----DETIKYWDFSTP--ELLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 71 ~~~~~-----d~~i~~~~~~~~--~~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
+.... ...+++||+.++ ++...+..+. ...... .|+|+.+
T Consensus 283 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l 330 (741)
T 1yr2_A 283 VITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQL 330 (741)
T ss_dssp EEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEE
T ss_pred EEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEE
Confidence 33332 348999999876 4134443333 333333 3777654
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.27 E-value=2.4e-05 Score=46.25 Aligned_cols=93 Identities=13% Similarity=0.057 Sum_probs=61.9
Q ss_pred CcCCCeEEcCCCCEEE-EEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 8 YVSSPPAFSNDVKRLL-VCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~-~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
.... +.|+|+|+.|+ +.. ++.|..|+.. ++ ...+......+..+++++++. ++++...++.|..|+..
T Consensus 46 ~~eg-p~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~-------l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 46 WSEG-PAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQR-------LVHCEHGRRAITRSDAD 115 (305)
T ss_dssp SEEE-EEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSC-------EEEEETTTTEEEEECTT
T ss_pred CccC-CeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCC-------EEEEECCCCEEEEECCC
Confidence 3445 88999998554 444 7899999874 54 344444556688999999985 44455556789999976
Q ss_pred CCceEEEEec-C----CCEEEEEEcCCCcEe
Q 033738 86 TPELLKTIDV-K----FPIFSMVRGKKGFAV 111 (112)
Q Consensus 86 ~~~~~~~~~~-~----~~v~~~~~~~~~~~~ 111 (112)
++....... . ..+..+++.|+|+..
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~ 145 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIW 145 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEE
Confidence 553322211 1 145678889988764
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.23 E-value=1.6e-05 Score=49.57 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=63.9
Q ss_pred eEEcCCCCEEEEEc-----------CCeEEEEeCCCCceeeecccc-------CCceEEEEEecCCCCccceeEEEEeee
Q 033738 13 PAFSNDVKRLLVCT-----------SNTVSIFSTSTGLQISSLEGH-------TAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-----------~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
+.++|||+.++.+. ++.|.++|..+.+.+..+... ......++++|+++ +++.+.
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk-------~lyV~n 195 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK-------NLLFYQ 195 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS-------EEEEEE
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC-------EEEEEe
Confidence 89999998887664 468999999998877666421 12235779999995 333433
Q ss_pred --cCCcEEEEeCCCCceEEEEecCCC--------EEEEEEcCCCcEe
Q 033738 75 --LDETIKYWDFSTPELLKTIDVKFP--------IFSMVRGKKGFAV 111 (112)
Q Consensus 75 --~d~~i~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~ 111 (112)
.++.+.+.|..+++.+..+..... -..+.++++|+.+
T Consensus 196 ~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 196 FSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLA 242 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEE
T ss_pred cCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEE
Confidence 367899999999988877765321 1124566777654
No 217
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.21 E-value=7.1e-05 Score=43.79 Aligned_cols=92 Identities=10% Similarity=0.085 Sum_probs=66.0
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecccc--CCc---eEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGH--TAP---VTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~--~~~---v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+++|++.|+.+. ++.|.++|.++.+....+... ..+ .+.++|. ++. +++..-.+..|.+.|.++
T Consensus 130 ~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-------lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 130 WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-------IFANVWQTNKIVRIDPET 201 (262)
T ss_dssp CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-------EEEEETTSSEEEEECTTT
T ss_pred eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-------EEEEEccCCeEEEEECCC
Confidence 45567787777766 788999999888777665532 122 3446775 552 455666678999999999
Q ss_pred CceEEEEecC-------------CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK-------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~-------------~~v~~~~~~~~~~~~~ 112 (112)
|+.+..+... .-.+.++|+|+++.+|
T Consensus 202 G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 202 GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 9999888753 1357899999988775
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.20 E-value=0.00016 Score=41.99 Aligned_cols=94 Identities=11% Similarity=-0.001 Sum_probs=63.7
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeec--cccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSL--EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
..+.. ++++++|+..++.. ++.|..|+.+ ++ ...+ ......+..+++.+++. ++++...++.+..||
T Consensus 57 ~~~~~-i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~-------l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 57 AKVMC-LTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGD-------IWFTEMNGNRIGRIT 126 (299)
T ss_dssp CCEEE-EEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSC-------EEEEETTTTEEEEEC
T ss_pred Cceee-EEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCC-------EEEEecCCceEEEEC
Confidence 44555 88899998888776 7889999976 33 2222 22345678899998884 555666678899999
Q ss_pred CCCCceEEEEec--CCCEEEEEEcCCCcEe
Q 033738 84 FSTPELLKTIDV--KFPIFSMVRGKKGFAV 111 (112)
Q Consensus 84 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~~ 111 (112)
. +++....... ...+..+++.++|..+
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEE
Confidence 8 5544332211 2367888888888653
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.19 E-value=2.4e-05 Score=48.40 Aligned_cols=91 Identities=11% Similarity=0.003 Sum_probs=59.2
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCC--cEEEEeC
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE--TIKYWDF 84 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~--~i~~~~~ 84 (112)
.... ++++++++++++.. ++.|+.||.+++........ ..... ++|++++. .++.+..++ .+..++.
T Consensus 132 ~P~~-la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~-------~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 132 YMWG-IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ-------RVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CEEE-EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSS-------EEEEEBSSTTCEEEEEEG
T ss_pred CceE-EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCC-------cEEEEecCCCceEEEEEc
Confidence 3444 88999998666666 69999999987754433333 22233 89999985 344555443 7888888
Q ss_pred CCCceEEEE----e-cCCCEEEEEEcCCC
Q 033738 85 STPELLKTI----D-VKFPIFSMVRGKKG 108 (112)
Q Consensus 85 ~~~~~~~~~----~-~~~~v~~~~~~~~~ 108 (112)
..+.....+ . ....+..++++|++
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~ 230 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETE 230 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTS
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCC
Confidence 766544444 2 22366778888843
No 220
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.18 E-value=5.2e-05 Score=44.56 Aligned_cols=95 Identities=6% Similarity=-0.031 Sum_probs=59.7
Q ss_pred CCcCCCeEEcCC-CCEEEEEcCCeEEEEeCCCCceeee-ccc----cCCceEEEEEecCCCCccceeEEEEeeecC----
Q 033738 7 SYVSSPPAFSND-VKRLLVCTSNTVSIFSTSTGLQISS-LEG----HTAPVTTVIVVPASTPATKILSYCWTASLD---- 76 (112)
Q Consensus 7 ~~v~~~~~~~~~-~~~l~~~~~~~v~~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d---- 76 (112)
..+.. +.++++ |+++++.....|..||.+ ++.... ... ....+..+++++++. ++++...+
T Consensus 71 ~~~~~-i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-------l~v~~~~~~~~~ 141 (314)
T 1pjx_A 71 GIPAG-CQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-------LWITAPAGEVAP 141 (314)
T ss_dssp CCEEE-EEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-------EEEEECBCBCTT
T ss_pred CCCce-EEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-------EEEEecCccccc
Confidence 45666 889999 766666555688999988 654322 211 123467899999885 44454443
Q ss_pred -----------CcEEEEeCCCCceEEEEecCCCEEEEEEc----CCCcEe
Q 033738 77 -----------ETIKYWDFSTPELLKTIDVKFPIFSMVRG----KKGFAV 111 (112)
Q Consensus 77 -----------~~i~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~ 111 (112)
+.+..++.. ++.............++++ |+|+.+
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l 190 (314)
T 1pjx_A 142 ADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQL 190 (314)
T ss_dssp SCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEE
T ss_pred ccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEE
Confidence 567777765 5544333333356778888 888654
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.18 E-value=0.00014 Score=43.52 Aligned_cols=88 Identities=9% Similarity=-0.023 Sum_probs=59.8
Q ss_pred eEEcCCCCEEEEE-c-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceE
Q 033738 13 PAFSNDVKRLLVC-T-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90 (112)
Q Consensus 13 ~~~~~~~~~l~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 90 (112)
+.|+|+++.++.. . ++.|..||.++++. ..+. ....+.++++++++. ++++. . ..+.+||..+++..
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~-------l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSK-------QLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTE-------EEEEE-T-TEEEEEETTTCCEE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCe-------EEEEE-C-CCEEEEECCCCcEE
Confidence 7899986655544 4 68999999987653 3333 235688999999984 33333 3 45999998887654
Q ss_pred EEEecC-----CCEEEEEEcCCCcEe
Q 033738 91 KTIDVK-----FPIFSMVRGKKGFAV 111 (112)
Q Consensus 91 ~~~~~~-----~~v~~~~~~~~~~~~ 111 (112)
...... ..+..+.++|+|+.+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~ 148 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALW 148 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEE
Confidence 333221 157889999998754
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.17 E-value=4.5e-05 Score=45.11 Aligned_cols=90 Identities=16% Similarity=0.067 Sum_probs=60.2
Q ss_pred eEEcCCCCEEEEEc-C------CeEEEEeCCCCcee--eec-cccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 13 PAFSNDVKRLLVCT-S------NTVSIFSTSTGLQI--SSL-EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~------~~v~~~~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
++|+||++.|+.+. . +.|..|++...... ..+ ....+....+++.+++. ++++. .+ .|.+|
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-------lwv~~-~~-gv~~~ 263 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-------LWSSS-GT-GVCVF 263 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-------EEECC-SS-EEEEE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-------EEEec-CC-cEEEE
Confidence 78999999777664 4 68999998654311 111 11223345678888884 33333 33 49999
Q ss_pred eCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 83 DFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
+. +++.+..+..+..+.+++|.|+++.||
T Consensus 264 ~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~ 292 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPGTASNCTFDQAQQRLF 292 (305)
T ss_dssp CT-TSCEEEEEECSSCCCEEEECTTSCEEE
T ss_pred CC-CCCEEEEEECCCceeEEEEeCCCCEEE
Confidence 98 477777777666788899998887664
No 223
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.13 E-value=2.3e-05 Score=52.02 Aligned_cols=94 Identities=10% Similarity=0.044 Sum_probs=58.1
Q ss_pred cCCCeEEc-CCCCEEEEEc--C----CeEEEEeCCCC-ceee-eccccCCceEEEEEecCCCCccceeEEEEeeec-C--
Q 033738 9 VSSPPAFS-NDVKRLLVCT--S----NTVSIFSTSTG-LQIS-SLEGHTAPVTTVIVVPASTPATKILSYCWTASL-D-- 76 (112)
Q Consensus 9 v~~~~~~~-~~~~~l~~~~--~----~~v~~~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-d-- 76 (112)
+.. .+|| |||+.++.+. + ..|+++|+.++ +.+. .+.. ....++|+|++. .++ .+... .
T Consensus 176 ~~~-~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~---~l~---y~~~d~~~~ 245 (751)
T 2xe4_A 176 VME-VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHT---SLF---YVTKDETLR 245 (751)
T ss_dssp EEE-EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTT---EEE---EEEECTTCC
T ss_pred Eee-eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCC---EEE---EEEECCCCC
Confidence 444 8999 9999988664 2 25999999988 5321 1111 124678999984 232 22221 1
Q ss_pred -CcEEEEeCCCCce--EEEEec--CCCEEEEEEcCCCcEeC
Q 033738 77 -ETIKYWDFSTPEL--LKTIDV--KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 77 -~~i~~~~~~~~~~--~~~~~~--~~~v~~~~~~~~~~~~~ 112 (112)
..|+.+++.++.. ...+.. ......+.|+|||++|+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~ 286 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLC 286 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEE
Confidence 3578888877642 233332 22566789999998763
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.13 E-value=9.9e-05 Score=43.28 Aligned_cols=92 Identities=7% Similarity=-0.016 Sum_probs=66.2
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecccc--CC---ceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGH--TA---PVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+++|++.|+.+. ++.+.++|.++.+....+... .. .++.++|. ++. +++....+..|.+.|.++
T Consensus 139 wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-------lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 139 WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-------IYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-------EEEEETTCSEEEEECTTT
T ss_pred eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-------EEEEECCCCeEEEEeCCC
Confidence 34557788887776 789999999988777666532 11 33556766 553 455665678999999999
Q ss_pred CceEEEEecC--------------CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK--------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~--------------~~v~~~~~~~~~~~~~ 112 (112)
|+.+..+... .-.+.++|+|+++.+|
T Consensus 211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 9998887642 1468899999887665
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.12 E-value=0.00011 Score=46.27 Aligned_cols=92 Identities=7% Similarity=0.085 Sum_probs=64.9
Q ss_pred eEEcCCCCEEEEEc-C------CeEEEEeCCCCceeeeccccCCc---eEEEEEecCCCCccceeEEEEeee--------
Q 033738 13 PAFSNDVKRLLVCT-S------NTVSIFSTSTGLQISSLEGHTAP---VTTVIVVPASTPATKILSYCWTAS-------- 74 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~------~~v~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (112)
+..+|+| .+++.. + +.+.++|.++.+.+..+.....+ -..+.|+|+++ .+++..
T Consensus 143 ~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-------~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 143 VHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-------VLVSSEWAVPNTIE 214 (462)
T ss_dssp EEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-------EEEECBCCCHHHHT
T ss_pred eeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-------EEEEccCcCccccc
Confidence 4567899 655543 3 68999999999888887633222 23578899985 444553
Q ss_pred -----------cCCcEEEEeCCCCceEEEEecCC---CEEEEEE--cCCCcEeC
Q 033738 75 -----------LDETIKYWDFSTPELLKTIDVKF---PIFSMVR--GKKGFAVF 112 (112)
Q Consensus 75 -----------~d~~i~~~~~~~~~~~~~~~~~~---~v~~~~~--~~~~~~~~ 112 (112)
...+|.+||+.+++.+.++.... ....+.| +|+|++.|
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEE
Confidence 36899999999988888887652 3445555 99998765
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.11 E-value=6.2e-05 Score=46.60 Aligned_cols=92 Identities=11% Similarity=0.148 Sum_probs=58.1
Q ss_pred eEEcCCCCEEEEEc-CC--eEEEEeCCCCceeeec----cccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 13 PAFSNDVKRLLVCT-SN--TVSIFSTSTGLQISSL----EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~--~v~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
++|+++++.|+.+. ++ .|.+++...+.....+ ........+++++|+.. .+++ +..++.|+.||..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g------~lyv-~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEE------WLYF-VDSNKNFGRFNVK 248 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSS------EEEE-ECTTCEEEEEETT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCC------eEEE-EECCCcEEEEECC
Confidence 78999999888887 43 8999987755433333 21345567899999432 1333 5567899999998
Q ss_pred CCceEEE----EecCC-C--EEEEEEcCCCcEe
Q 033738 86 TPELLKT----IDVKF-P--IFSMVRGKKGFAV 111 (112)
Q Consensus 86 ~~~~~~~----~~~~~-~--v~~~~~~~~~~~~ 111 (112)
++..... ..... . ...++|+|++..+
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 7654322 11111 1 2289999964444
No 227
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.08 E-value=0.00031 Score=40.70 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=65.2
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccC-----CceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHT-----APVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+.+|++.|+.+. ++.|.++|.++.+....+.... ..++.+.+. ++. +++....+..|.+.|.++
T Consensus 108 wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-------lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 108 WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-------LLANVWLTSRIARIDPAS 179 (243)
T ss_dssp CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-------EEEEETTTTEEEEECTTT
T ss_pred eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-------EEEEECCCCeEEEEECCC
Confidence 45667787777776 7899999999887776665321 233456655 452 445555677999999999
Q ss_pred CceEEEEecC--------------CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK--------------FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~--------------~~v~~~~~~~~~~~~~ 112 (112)
|+.+..+... .-.+.++++|+++.+|
T Consensus 180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 9998887632 1457899999888765
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.06 E-value=0.00034 Score=40.49 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=60.0
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceE
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 90 (112)
++++++++.|+.+. ++.|..++.+.......+.........+++++++. .++++....+.|.+++.......
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~------~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGR------TIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTT------EEEEEETTTTEEEEEETTSCSCE
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCC------eEEEEECCCCEEEEEEcCCCCEE
Confidence 78888877776665 68999999876543323322224568899998653 24456666788999998643332
Q ss_pred EEEecC-CCEEEEEEcCCCcEe
Q 033738 91 KTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 91 ~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
...... .....++++|++..+
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNL 136 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEE
T ss_pred EEEECCCCCccEEEEeeCCCEE
Confidence 222222 366788898865544
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.02 E-value=0.00015 Score=42.57 Aligned_cols=91 Identities=9% Similarity=-0.033 Sum_probs=59.8
Q ss_pred CCCeEEcCCCCEEEEEc---CCeEEEEeCCCCceeeeccccCCc-eEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 10 SSPPAFSNDVKRLLVCT---SNTVSIFSTSTGLQISSLEGHTAP-VTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~---~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
.. +.+++|+.++++.+ ++.|+++|+.+++.+..+...... ...+++. +. .++++...++.+.++|..
T Consensus 24 ~G-l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~------~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 24 QG-LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NE------KLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EE-EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TT------EEEEEETTCSEEEEEETT
T ss_pred cc-EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CC------EEEEEEecCCEEEEEECC
Confidence 45 89999875555544 479999999999887776532222 2344554 32 144456678899999999
Q ss_pred CCceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 86 TPELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 86 ~~~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
+.+.+.++... ..- ..++++|+.+
T Consensus 95 t~~v~~~i~~g~~~g--~glt~Dg~~l 119 (266)
T 2iwa_A 95 TLSNIKNFTHQMKDG--WGLATDGKIL 119 (266)
T ss_dssp TTEEEEEEECCSSSC--CEEEECSSSE
T ss_pred CCcEEEEEECCCCCe--EEEEECCCEE
Confidence 99988888755 221 2344566544
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.98 E-value=7.4e-05 Score=49.12 Aligned_cols=74 Identities=12% Similarity=0.033 Sum_probs=50.4
Q ss_pred CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC--CEEEEEEc
Q 033738 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF--PIFSMVRG 105 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~ 105 (112)
+.|..||+.+++..-.+.. ..+.....+..++. .++.++.|+.++.||.++|+.+..+..+. ...-+.|.
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~-------~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~ 528 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGN-------VVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYM 528 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCC-------EEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEE
Confidence 6799999999987666543 23333344555553 44467889999999999999998887654 22334555
Q ss_pred CCCc
Q 033738 106 KKGF 109 (112)
Q Consensus 106 ~~~~ 109 (112)
++|+
T Consensus 529 ~~G~ 532 (677)
T 1kb0_A 529 VDGR 532 (677)
T ss_dssp ETTE
T ss_pred eCCE
Confidence 6665
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.95 E-value=0.00027 Score=46.51 Aligned_cols=93 Identities=12% Similarity=0.080 Sum_probs=54.4
Q ss_pred eEEcCCCCEEEEEc-CC-------------eEEEEeCCCCce--eeec--cc-cCCceEEEEEecCCCCccceeEEEEe-
Q 033738 13 PAFSNDVKRLLVCT-SN-------------TVSIFSTSTGLQ--ISSL--EG-HTAPVTTVIVVPASTPATKILSYCWT- 72 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~-------------~v~~~~~~~~~~--~~~~--~~-~~~~v~~~~~~~~~~~~~~~~~~~~~- 72 (112)
++|+ ||+.|+.++ +. .|++|++.++.. ...+ .. +......+.++|+++ .++ +...
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~---~l~-~~~~~ 254 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR---FLL-ISAAN 254 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC---EEE-EEEES
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC---EEE-EEEcc
Confidence 8999 999888776 53 499999876532 2222 22 334467889999995 332 2111
Q ss_pred eecCCcEEEEeCCCCc-eEEEEecCC-CEEEEEEcCCCcEe
Q 033738 73 ASLDETIKYWDFSTPE-LLKTIDVKF-PIFSMVRGKKGFAV 111 (112)
Q Consensus 73 ~~~d~~i~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~~ 111 (112)
.+....++++|+.++. ....+..+. ..... ++++|..+
T Consensus 255 ~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l 294 (693)
T 3iuj_A 255 STSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTL 294 (693)
T ss_dssp SSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEE
T ss_pred CCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEE
Confidence 2234589999987763 333443333 33333 45555443
No 232
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.95 E-value=0.00063 Score=39.53 Aligned_cols=94 Identities=17% Similarity=0.083 Sum_probs=64.5
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceee-eccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQIS-SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
....+ +.++++|+..++.. ++.|..+|.. ++... .+......+..+++.+++. ++++...++.+..+|.
T Consensus 20 ~~p~~-i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-------l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 20 SGPYG-ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-------IWFTENGANKIGKLSK 90 (300)
T ss_dssp CCEEE-EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-------EEEEETTTTEEEEECT
T ss_pred CCcce-eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-------EEEEecCCCeEEEECC
Confidence 34555 88899999887776 7999999987 54332 2222335678899988884 5556666788999998
Q ss_pred CCCceEEEEec---CCCEEEEEEcCCCcEe
Q 033738 85 STPELLKTIDV---KFPIFSMVRGKKGFAV 111 (112)
Q Consensus 85 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~ 111 (112)
. ++.. .+.. ...+..+++.++|+.+
T Consensus 91 ~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~ 118 (300)
T 2qc5_A 91 K-GGFT-EYPLPQPDSGPYGITEGLNGDIW 118 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECSTTCEE
T ss_pred C-CCeE-EecCCCCCCCCccceECCCCCEE
Confidence 7 5543 3332 2368888888888654
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.94 E-value=0.00014 Score=47.95 Aligned_cols=75 Identities=11% Similarity=-0.023 Sum_probs=51.2
Q ss_pred CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC--CEEEEEEc
Q 033738 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF--PIFSMVRG 105 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~ 105 (112)
+.+..||+.+++..-.++.+. +...-.+...+. +++.++.|+.++.||.++|+.+..+..+. ...-+.|.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg-------lvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~ 526 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGN-------LVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYS 526 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred eeEEEEECCCCCeEeEccCCC-CccCccceECCC-------EEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEE
Confidence 668999999998776655432 222224444553 45577899999999999999998887654 22335566
Q ss_pred CCCcE
Q 033738 106 KKGFA 110 (112)
Q Consensus 106 ~~~~~ 110 (112)
.+|+.
T Consensus 527 ~~G~q 531 (689)
T 1yiq_A 527 VDGEQ 531 (689)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 67653
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.89 E-value=0.00049 Score=43.39 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=60.9
Q ss_pred eEEcCCCCEEEEEc--------------------CCeEEEEeCCCCceeeecccc-C-CceEEEEE--ecCCCCccceeE
Q 033738 13 PAFSNDVKRLLVCT--------------------SNTVSIFSTSTGLQISSLEGH-T-APVTTVIV--VPASTPATKILS 68 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--------------------~~~v~~~~~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~~~~~~~ 68 (112)
+.|+|+++.+++.. +..|.+||+.+++.+..+... . .....+.| +|+++ .
T Consensus 193 ~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~------~ 266 (462)
T 2ece_A 193 FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKL------M 266 (462)
T ss_dssp EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCC------E
T ss_pred EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCC------E
Confidence 67899999988884 589999999988766666542 1 23345555 88885 1
Q ss_pred EEEeee-----cCCcEEEEeCCCCce--EEEE--ec-----------------CCCEEEEEEcCCCcEeC
Q 033738 69 YCWTAS-----LDETIKYWDFSTPEL--LKTI--DV-----------------KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 69 ~~~~~~-----~d~~i~~~~~~~~~~--~~~~--~~-----------------~~~v~~~~~~~~~~~~~ 112 (112)
.++++. .+++|.+|....|.. .+.+ .. ......+.+++||++||
T Consensus 267 aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 267 GFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 233444 667887766554421 1111 00 13467788999999886
No 235
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.89 E-value=0.00082 Score=39.05 Aligned_cols=94 Identities=10% Similarity=-0.060 Sum_probs=63.4
Q ss_pred CCcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceee-eccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 7 SYVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQIS-SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
..+.. ++++++|+..++.. ++.|..+|.. ++... ........+..+++.+++. ++++...++.+..+|.
T Consensus 62 ~~~~~-i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-------l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMC-LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-------IWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CCEEE-EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-------EEEEETTTTEEEEECT
T ss_pred Cccee-EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-------EEEEccCCCeEEEECC
Confidence 34555 78889998777776 6889999987 54321 2222335678899998884 5556666788999998
Q ss_pred CCCceEEE-Eec-CCCEEEEEEcCCCcE
Q 033738 85 STPELLKT-IDV-KFPIFSMVRGKKGFA 110 (112)
Q Consensus 85 ~~~~~~~~-~~~-~~~v~~~~~~~~~~~ 110 (112)
. ++.... ... ...+..+++.++|+.
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 7 554422 221 236788888888874
No 236
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.85 E-value=0.00082 Score=39.25 Aligned_cols=100 Identities=14% Similarity=0.208 Sum_probs=67.1
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccc-cCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
|-...+.. ++++|++..|++.. ++.|...|.+ ++.++.+.- .....-.+++.+++. ++++.-.++.+.
T Consensus 24 g~~~~lSG-la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-------~~vs~E~~~~l~ 94 (255)
T 3qqz_A 24 GITNNISS-LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-------FVISDERDYAIY 94 (255)
T ss_dssp TCCSCEEE-EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-------EEEEETTTTEEE
T ss_pred CcccCcce-eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-------EEEEECCCCcEE
Confidence 43456776 99999988777655 6889999988 776666542 224567888887773 555666678888
Q ss_pred EEeCCCCc---eEEEEec-----C--CCEEEEEEcCCCcEeC
Q 033738 81 YWDFSTPE---LLKTIDV-----K--FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 81 ~~~~~~~~---~~~~~~~-----~--~~v~~~~~~~~~~~~~ 112 (112)
++++.... .+..... + .....++|+|.++.+|
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~ 136 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFW 136 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEE
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEE
Confidence 88876533 2233321 1 1568999999887654
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.85 E-value=0.00016 Score=43.53 Aligned_cols=95 Identities=7% Similarity=-0.050 Sum_probs=60.7
Q ss_pred cCCCeEEcCCCCEEEEEc-C-CeEEEEeCCC---Cc-----eeee--ccccCCceEEEEEecCCCCccceeEEEEeeecC
Q 033738 9 VSSPPAFSNDVKRLLVCT-S-NTVSIFSTST---GL-----QISS--LEGHTAPVTTVIVVPASTPATKILSYCWTASLD 76 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~-~~v~~~~~~~---~~-----~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 76 (112)
+.. ++++|||+.|+.+. . ..+..++... +. .... ..++.+....+++++++. ++++...+
T Consensus 197 ~~g-ia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-------l~va~~~~ 268 (343)
T 2qe8_A 197 VNG-IVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-------IYVGDLAH 268 (343)
T ss_dssp EEE-EEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-------EEEEEGGG
T ss_pred cce-eEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-------EEEEccCC
Confidence 355 89999999888776 3 5666665421 11 0001 112233445788999885 66677788
Q ss_pred CcEEEEeCCCCceEEEEecC--CCEEEEEEcCCCcEe
Q 033738 77 ETIKYWDFSTPELLKTIDVK--FPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~ 111 (112)
+.|.+||..+|+.......+ .....+++.++|..+
T Consensus 269 ~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~ 305 (343)
T 2qe8_A 269 SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLY 305 (343)
T ss_dssp TEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEE
T ss_pred CeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEE
Confidence 99999998567644333332 268899999888654
No 238
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.83 E-value=0.00092 Score=41.91 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=66.2
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCce------------eeeccc------cCCceEEEEEecCCCCccceeEE
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQ------------ISSLEG------HTAPVTTVIVVPASTPATKILSY 69 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~------------~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~ 69 (112)
.+.. +..+|+|++|+..++..|.+..+..+.. .+.+.- ...+|..+.|+|-+..+..++
T Consensus 67 ~i~q-lvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV-- 143 (452)
T 3pbp_A 67 DTFH-VISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV-- 143 (452)
T ss_dssp TTCE-EEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEE--
T ss_pred ceeE-EEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEE--
Confidence 3555 8899999999999989999998873210 111211 246799999999875444454
Q ss_pred EEeeecCCcEEEEeCCCCc--eEEEEe-------cC---CCEEEEEEcCCCcEe
Q 033738 70 CWTASLDETIKYWDFSTPE--LLKTID-------VK---FPIFSMVRGKKGFAV 111 (112)
Q Consensus 70 ~~~~~~d~~i~~~~~~~~~--~~~~~~-------~~---~~v~~~~~~~~~~~~ 111 (112)
.-..|+.|++||+.... +. .+. .. ..+.+++|.+++-.+
T Consensus 144 --VLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTL 194 (452)
T 3pbp_A 144 --VLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTL 194 (452)
T ss_dssp --EEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCE
T ss_pred --EEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEE
Confidence 77889999999987532 22 221 11 267888888766433
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.70 E-value=0.00064 Score=39.82 Aligned_cols=77 Identities=4% Similarity=-0.061 Sum_probs=51.5
Q ss_pred eEEcCCCCEEEEEc-CC--eEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT-SN--TVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 89 (112)
+.++ ++.++.+.+ ++ .|+.+|+++++.+..+..... .......+++. .++.....++.+.++|..+.+.
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~------~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKD------KIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETT------EEEEEESSSSEEEEEETTTCCE
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCC------EEEEEEeeCCEEEEEECccCcE
Confidence 7777 565445555 44 899999999988777654332 33333333443 1334555688999999999999
Q ss_pred EEEEecCC
Q 033738 90 LKTIDVKF 97 (112)
Q Consensus 90 ~~~~~~~~ 97 (112)
+.++....
T Consensus 120 ~~ti~~~~ 127 (262)
T 3nol_A 120 VRSFNYDG 127 (262)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 88887644
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.68 E-value=6.1e-05 Score=45.96 Aligned_cols=67 Identities=19% Similarity=0.127 Sum_probs=41.3
Q ss_pred CCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEE
Q 033738 18 DVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTI 93 (112)
Q Consensus 18 ~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 93 (112)
++..+++++ |+.++.||..+++....+.. +.+.+..+..++. .++.++.|+.++.||..+|+.+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~-------~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEP-------AFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----C-------CEEECTTTCCEEEC-----CCSEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCC-------EEEEeCCCCEEEEEECCCCceeeee
Confidence 567777777 89999999999987766654 3343333444553 4456788999999999888765544
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.64 E-value=0.00094 Score=39.24 Aligned_cols=76 Identities=8% Similarity=-0.019 Sum_probs=49.6
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEE
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLK 91 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 91 (112)
+.++ ++.++.+.+ ++.|+.+|+++++.+..+ -. .........+++. + ++.....++.+.++|..+.+.+.
T Consensus 60 L~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~---~---Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 60 LVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE---R---LYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS---C---EEEEESSSCEEEEEETTTTEEEE
T ss_pred EEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC---E---EEEEEccCCEEEEEECCcCcEEE
Confidence 6665 234444445 688999999999877666 22 2233322333442 1 33456678899999999999998
Q ss_pred EEecCC
Q 033738 92 TIDVKF 97 (112)
Q Consensus 92 ~~~~~~ 97 (112)
++....
T Consensus 131 ti~~~~ 136 (268)
T 3nok_A 131 TTRYSG 136 (268)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 887644
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.54 E-value=0.0047 Score=38.01 Aligned_cols=97 Identities=6% Similarity=-0.066 Sum_probs=59.1
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
... ++|++.+..|+... .+.|..++++.......+.........+++.+.+. .++++-...+.|.+.++..
T Consensus 118 ~~g-l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g------~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 118 AIA-LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD------KLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT------EEEEEETTTTEEEECBTTS
T ss_pred cEE-EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC------eEEEEcCCCCeEEEEeCCC
Confidence 344 78888777776665 68899888876543333322223345778887553 2445666677888888764
Q ss_pred CceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
......+... .....+++.|.+..||
T Consensus 191 ~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CceEEeecCCCCCCcEEEEEcCCCeEE
Confidence 4333333322 2677888888766554
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.52 E-value=0.0018 Score=43.22 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=45.0
Q ss_pred CeEEcCCCCEEEEEc-C-----CeEEEEeCCCCcee--eecc-ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 12 PPAFSNDVKRLLVCT-S-----NTVSIFSTSTGLQI--SSLE-GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 12 ~~~~~~~~~~l~~~~-~-----~~v~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
.+.|+|||+.|+... + ..|+.+++.++... ..+. ........+.|+|+++ .++ +.........++++
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~---~l~-~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTN---TLC-IGSQSPETAEVHLL 300 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSS---EEE-EEEECSSCEEEEEE
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCC---EEE-EEecCCCCceEEEE
Confidence 389999998887765 4 36888888765321 2222 2223456788999994 333 22222334578888
Q ss_pred eCCCC
Q 033738 83 DFSTP 87 (112)
Q Consensus 83 ~~~~~ 87 (112)
|+.++
T Consensus 301 d~~~~ 305 (751)
T 2xe4_A 301 DLRKG 305 (751)
T ss_dssp ESSSC
T ss_pred ECCCC
Confidence 98765
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.43 E-value=0.0064 Score=36.90 Aligned_cols=97 Identities=6% Similarity=-0.066 Sum_probs=59.9
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
... ++|++.++.|+... .+.|..++++.......+.........+++.+.+. .++.+....+.|.+.+...
T Consensus 75 ~~~-l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g------~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 75 AIA-LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD------KLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT------EEEEEETTTTEEEEEETTS
T ss_pred eEE-EEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC------eEEEEcCCCCeEEEEcCCC
Confidence 344 78888777777665 58888888876543332222223346788887553 2445666678899998874
Q ss_pred CceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
.......... .....+++.|.+..+|
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEE
Confidence 4333333222 2677888888665553
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.38 E-value=0.0059 Score=35.29 Aligned_cols=97 Identities=5% Similarity=-0.022 Sum_probs=57.7
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeec--CCcEEEEe
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL--DETIKYWD 83 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--d~~i~~~~ 83 (112)
.... +++++++..++.+. .+.|.+++.+.................++++|++. .++++... .+.|..++
T Consensus 80 ~p~~-ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g------~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 80 SPEG-IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRG------NLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CEEE-EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT------EEEEEECCSSSCEEEEEE
T ss_pred CccE-EEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCC------EEEEEECCCCCcEEEEEe
Confidence 3444 78888776666554 68999999864322222222224467899999653 12334333 46788888
Q ss_pred CCCCceEEEEe-cC-CCEEEEEEcCCCcEeC
Q 033738 84 FSTPELLKTID-VK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 84 ~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~ 112 (112)
+.. .....+. .. .....+++++++..+|
T Consensus 153 ~dg-~~~~~~~~~~~~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 153 MDG-TNRRILAQDNLGLPNGLTFDAFSSQLC 182 (267)
T ss_dssp TTS-CCCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred cCC-CCcEEEEECCCCCCcEEEEcCCCCEEE
Confidence 753 3333332 22 2678889999877664
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.37 E-value=0.0064 Score=36.14 Aligned_cols=95 Identities=13% Similarity=0.011 Sum_probs=55.3
Q ss_pred cCCCeEEcC-CCCEEEEEcCCeEEEEeCCCCceeeeccc-----cCCceEEEEEec-CCCCccceeEEEEeee-------
Q 033738 9 VSSPPAFSN-DVKRLLVCTSNTVSIFSTSTGLQISSLEG-----HTAPVTTVIVVP-ASTPATKILSYCWTAS------- 74 (112)
Q Consensus 9 v~~~~~~~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~~~~~~~------- 74 (112)
... +++.+ +++++++...+.+..+|..++. +..+.. .......+++.+ ++. ++++..
T Consensus 82 p~g-i~~~~~~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-------l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 82 TYD-ISYNLQNNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-------VYFTDVSTLYDDR 152 (322)
T ss_dssp EEE-EEEETTTTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-------EEEEESCSSCCTT
T ss_pred Cce-EEEcCCCCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-------EEEECCccccccc
Confidence 444 77887 5655554445558888876553 222211 113457889999 885 333332
Q ss_pred ----------cCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 75 ----------LDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 75 ----------~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.++.+..+|..+++.......-.....++++|+|+.+|
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~ly 200 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVL 200 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEE
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEE
Confidence 13678888887665433332223455688999987553
No 247
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.34 E-value=0.0075 Score=37.69 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=55.7
Q ss_pred cCCCeEEcCCCCEEEEEc--CC----eEEEEeCCCCcee--eeccccCCceEEEEEec-CCCCccceeEEEEeeecCCcE
Q 033738 9 VSSPPAFSNDVKRLLVCT--SN----TVSIFSTSTGLQI--SSLEGHTAPVTTVIVVP-ASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~----~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~~i 79 (112)
... ++++++|+.|+.+. ++ .+..++.. +... ..+.. ......++++| ++. ++++-..++.|
T Consensus 181 P~~-ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~-------lyv~d~~~~~V 250 (430)
T 3tc9_A 181 VRT-ICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGE-------LYFNSWNAGQV 250 (430)
T ss_dssp EEE-EEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCC-------EEEEETTTTEE
T ss_pred cce-EEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCE-------EEEEECCCCEE
Confidence 344 88999998665554 22 33444432 2211 22221 23346788899 553 45566677899
Q ss_pred EEEeCCCCceEEEEecC--CCEEEEEEcCCCcEeC
Q 033738 80 KYWDFSTPELLKTIDVK--FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 112 (112)
+.++...+......... .....++|+|+|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 251 FRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp EEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred EEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 99998866543333322 2567899999998654
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.31 E-value=0.0028 Score=41.29 Aligned_cols=88 Identities=15% Similarity=0.036 Sum_probs=62.3
Q ss_pred CCCEEEEEc--CCeEEEEeCCCCceeeeccc-cCCceEEEEE-e-cCCCCccceeEEEEeee------------------
Q 033738 18 DVKRLLVCT--SNTVSIFSTSTGLQISSLEG-HTAPVTTVIV-V-PASTPATKILSYCWTAS------------------ 74 (112)
Q Consensus 18 ~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~~~~~~~~~~~~~------------------ 74 (112)
||++++... ++.|.+.|+++.+....+.. .......+++ + |++. +++.++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~-------~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN-------YVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-------EEEEEECSCEESSCSSSSTTCGGG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-------EEEEecccccccCCCCcccccccc
Confidence 788877665 58899999999886663331 2234567777 4 7775 433442
Q ss_pred cCCcEEEEeCCCCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 75 LDETIKYWDFSTPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 75 ~d~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.++.+.+.|..+.+...++........++.+|+|+++|
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~ 210 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAF 210 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEE
Confidence 24579999999988888887644556678899998875
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.31 E-value=0.0087 Score=35.73 Aligned_cols=97 Identities=9% Similarity=-0.027 Sum_probs=57.7
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCC----CceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTST----GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
... ++|+++++.|+.+. ++.|..+++.. ......+.........+++.+.+. .++++-...+.|.+.
T Consensus 32 p~g-~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~------~ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 32 VVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS------NIYWTDSVLGTVSVA 104 (316)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT------EEEEEETTTTEEEEE
T ss_pred eEE-EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC------eEEEEECCCCEEEEE
Confidence 345 78888777777665 68999999875 221222222223446888886543 244566677889999
Q ss_pred eCCCCceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 83 DFSTPELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 83 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
+............. .....+++.|.+..+|
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly 135 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMY 135 (316)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEE
T ss_pred eCCCCceEEEEECCCCCcceEEeCCCCCEEE
Confidence 98744333333322 3677888888665543
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.29 E-value=0.0038 Score=40.44 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=40.6
Q ss_pred CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC
Q 033738 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF 97 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 97 (112)
+.+..+|..+++....+... ..+........+. .++.++.|+.++.+|.++|+.+..+....
T Consensus 444 g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg-------~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGG-------LVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CeEEEEECCCCCEEEEecCC-CCccceeEEECCC-------EEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 67888888888766555422 1122222222332 33457889999999999999998887654
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.26 E-value=0.0036 Score=40.70 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=46.9
Q ss_pred CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCCCEE--EEEE
Q 033738 27 SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKFPIF--SMVR 104 (112)
Q Consensus 27 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~v~--~~~~ 104 (112)
++.+.-||+.+++..-+.... .+...-.....+. +++.++.|+.++.+|.++|+.+..++....+. -+.|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg-------lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y 536 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGN-------LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITW 536 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCC-------EEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEE
Confidence 367888898888766554422 1111111122232 44468889999999999999998887765332 2455
Q ss_pred cCCCc
Q 033738 105 GKKGF 109 (112)
Q Consensus 105 ~~~~~ 109 (112)
..+|+
T Consensus 537 ~~~G~ 541 (582)
T 1flg_A 537 EQDGE 541 (582)
T ss_dssp EETTE
T ss_pred EECCE
Confidence 56665
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.25 E-value=0.012 Score=36.21 Aligned_cols=97 Identities=9% Similarity=0.025 Sum_probs=57.9
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC-CcEEEEeCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-ETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~ 85 (112)
... +++++.+..|+... .+.|.+.+++.......+.........+++.|.+. .++.+-... +.|..+++.
T Consensus 161 p~g-lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g------~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 161 PGG-LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG------TIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp CCC-EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT------EEEEEECSSSCEEEEEETT
T ss_pred ccE-EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC------eEEEeccCCCCEEEEEeCC
Confidence 344 78887666665554 57888888764432223333334568899998764 233344444 788888876
Q ss_pred CCceEEEEecCC-CEEEEEEcCCCcEeC
Q 033738 86 TPELLKTIDVKF-PIFSMVRGKKGFAVF 112 (112)
Q Consensus 86 ~~~~~~~~~~~~-~v~~~~~~~~~~~~~ 112 (112)
............ ....++++|++..||
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY 261 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMY 261 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEE
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEE
Confidence 433322222222 678899988776654
No 253
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.24 E-value=0.00063 Score=41.52 Aligned_cols=90 Identities=12% Similarity=0.102 Sum_probs=50.1
Q ss_pred EEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEE
Q 033738 14 AFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKT 92 (112)
Q Consensus 14 ~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 92 (112)
.++|++..+++++ ++.++.||.++++....+.... .....+..+...+. .++.++.++.++.||..+|+.+..
T Consensus 125 ~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~----~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 125 SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKM----SHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp --------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCC----CEEEEETSCEEEEECTTTCCEEEE
T ss_pred cccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccc----eEEEECCCCEEEEEECCCCcEEEE
Confidence 3456777777777 7899999998887554443211 11112222210001 234678899999999999998887
Q ss_pred EecCCCEEE-EEEcCCCc
Q 033738 93 IDVKFPIFS-MVRGKKGF 109 (112)
Q Consensus 93 ~~~~~~v~~-~~~~~~~~ 109 (112)
.....++.. ..++++|.
T Consensus 199 ~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 199 QNYASPVVAFYVWQREGL 216 (369)
T ss_dssp EECSSCEEEEEECTTSSC
T ss_pred ecCCCceEEEEEecCCce
Confidence 776665543 35556653
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.20 E-value=0.013 Score=35.54 Aligned_cols=93 Identities=11% Similarity=0.059 Sum_probs=56.7
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC-CcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-ETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~~~~~ 89 (112)
+++.+.+..|+... .+.|.+.+++.......+.........+++.|.+. .++.+.... +.|...++... .
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g------~ly~td~~~~~~I~r~~~dG~-~ 193 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG------TIYWTDWGNTPRIEASSMDGS-G 193 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT------EEEEEECSSSCEEEEEETTSC-S
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC------eEEEeccCCCCEEEEEeCCCC-C
Confidence 78887666665554 58899998875432222333334568899998653 234454444 78888887633 3
Q ss_pred EEEEe-cC-CCEEEEEEcCCCcEeC
Q 033738 90 LKTID-VK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 90 ~~~~~-~~-~~v~~~~~~~~~~~~~ 112 (112)
...+. .. .....++++|++..||
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~~lY 218 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGRRMY 218 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTTEEE
T ss_pred cEEEEECCCCCcceEEEeCCCCEEE
Confidence 33332 22 2678889988776654
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.14 E-value=0.0095 Score=35.14 Aligned_cols=88 Identities=9% Similarity=0.080 Sum_probs=52.2
Q ss_pred cCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCc
Q 033738 9 VSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE 88 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 88 (112)
+.. +...+++..++...++.+..+|.+ ++....+......+..+...+++. +++.. +.+..+| .+++
T Consensus 139 ~~~-~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-------l~v~t---~~l~~~d-~~g~ 205 (330)
T 3hxj_A 139 YAT-PIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-------IYFGS---DKVYAIN-PDGT 205 (330)
T ss_dssp CSC-CEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-------EEEES---SSEEEEC-TTSC
T ss_pred eee-eEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-------EEEEe---CEEEEEC-CCCc
Confidence 344 666667775543337899999988 765555544444455566656663 22222 7788888 6666
Q ss_pred eEEEEecCC-CEEEEEEcCCCc
Q 033738 89 LLKTIDVKF-PIFSMVRGKKGF 109 (112)
Q Consensus 89 ~~~~~~~~~-~v~~~~~~~~~~ 109 (112)
......... .+.++...++|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSC
T ss_pred EEEEEccCCcceeceEECCCCe
Confidence 655554332 455555555544
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.14 E-value=0.017 Score=35.77 Aligned_cols=98 Identities=9% Similarity=-0.031 Sum_probs=59.9
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCC----ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTG----LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+.. ++|++.+..|+... .+.|+.+++... .....+.........+++.+.+. .++++-...+.|.+
T Consensus 113 ~~~~-l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~------~lY~~d~~~~~I~~ 185 (400)
T 3p5b_L 113 NVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS------NIYWTDSVLGTVSV 185 (400)
T ss_dssp CEEE-EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT------EEEEEETTTTEEEE
T ss_pred cceE-EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC------ceEEEECCCCeEEE
Confidence 4455 88888777777665 588888887642 12222222334567888887543 24556667788999
Q ss_pred EeCCCCceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
.++........+... .....+++.|.+..||
T Consensus 186 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly 217 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMY 217 (400)
T ss_dssp ECTTTCSEEEEEECSSCCEEEEEEETTTTEEE
T ss_pred EeCCCCceEEEEeCCCCCcceEEEecccCeEE
Confidence 998755443333322 2677888888665554
No 257
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.13 E-value=0.014 Score=34.47 Aligned_cols=93 Identities=12% Similarity=0.045 Sum_probs=55.0
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
..+.+ +...++|...+...++.+..++. +++....+.........+...+++ .+..++.++.+..+|. +
T Consensus 215 ~~~~~-~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g--------~l~v~t~~ggl~~~d~-~ 283 (330)
T 3hxj_A 215 WTVTR-PAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD--------TIYFGSYDGHLYAINP-D 283 (330)
T ss_dssp CCCSC-CEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS--------CEEEECTTCEEEEECT-T
T ss_pred cceec-eEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC--------eEEEecCCCCEEEECC-C
Confidence 34555 77888876665555778888874 454454444333333344455455 2335667778999995 6
Q ss_pred CceEEEEecCC-CEEEEEEcCCCcE
Q 033738 87 PELLKTIDVKF-PIFSMVRGKKGFA 110 (112)
Q Consensus 87 ~~~~~~~~~~~-~v~~~~~~~~~~~ 110 (112)
++......... .+.++...++|..
T Consensus 284 g~~~~~~~~~~~~~~~~~~d~~g~l 308 (330)
T 3hxj_A 284 GTEKWNFETGSWIIATPVIDENGTI 308 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTCCE
T ss_pred CcEEEEEEcCCccccceEEcCCCEE
Confidence 77666655443 4555555566654
No 258
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.04 E-value=0.035 Score=37.63 Aligned_cols=98 Identities=11% Similarity=0.031 Sum_probs=60.1
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee-ecCCcEEEEeC
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA-SLDETIKYWDF 84 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~ 84 (112)
.... +++.+.++.|+.+. .+.|.+.+++.......+.........+++.|... .++.+- +..+.|...++
T Consensus 472 ~P~G-LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g------~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 472 APDG-LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG------FMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp CCCE-EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT------EEEEEECSSSCEEEEEET
T ss_pred Ccce-eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC------CEEEecCCCCCeEEEEec
Confidence 3445 88888777777664 68999999875443333333334568999998753 133333 33377888888
Q ss_pred CCCceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 85 STPELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 85 ~~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
........+... .....|++.+.+..||
T Consensus 545 dG~~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 545 NGVDIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp TSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CCCceEEEEeCCCCCceEEEEecCCCeEE
Confidence 643333333322 2677888887766654
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.04 E-value=0.0087 Score=35.42 Aligned_cols=89 Identities=4% Similarity=-0.060 Sum_probs=57.5
Q ss_pred EcCCCCEEEEEc--CCeEEEEeCCC-Cce--eeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCce
Q 033738 15 FSNDVKRLLVCT--SNTVSIFSTST-GLQ--ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89 (112)
Q Consensus 15 ~~~~~~~l~~~~--~~~v~~~~~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 89 (112)
++|+++.|+.+. .+.|..+++.. +.. ...+.. ......+++.+++. ++++....+.|.+++.. |+.
T Consensus 174 is~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-------l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 174 LKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-------LYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-------EEEECBTTCCEEEECTT-CCE
T ss_pred cCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-------EEEEeCCCCeEEEECCC-CCE
Confidence 478888776664 68999999864 321 111111 12335678888885 55666677889999975 655
Q ss_pred EE--EEecC-CCEEEEEEc---CCCcEeC
Q 033738 90 LK--TIDVK-FPIFSMVRG---KKGFAVF 112 (112)
Q Consensus 90 ~~--~~~~~-~~v~~~~~~---~~~~~~~ 112 (112)
.. .+..+ ....+++|. |+++.||
T Consensus 245 ~~~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 245 TIIAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred EEEeecccccCCceEEEEecccCCCCEEE
Confidence 33 23333 368899998 7877665
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.96 E-value=0.019 Score=33.32 Aligned_cols=77 Identities=9% Similarity=-0.104 Sum_probs=50.7
Q ss_pred eEEcCCCCEEEEEc-C--CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT-S--NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 89 (112)
+.|++ +.++.+.+ + ..|+.+|+++++.+..+...... ......+.+. .++.....++.+.++|..+.+.
T Consensus 26 L~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~------~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 26 LFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRD------RLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp EEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETT------EEEEEESSSSEEEEEETTTTEE
T ss_pred EEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCC------EEEEEEeeCCEEEEEECCcCcE
Confidence 77775 44444444 3 59999999999887766543332 2222333332 1334556788999999999999
Q ss_pred EEEEecCC
Q 033738 90 LKTIDVKF 97 (112)
Q Consensus 90 ~~~~~~~~ 97 (112)
+.++....
T Consensus 98 ~~ti~~~~ 105 (243)
T 3mbr_X 98 RARFRYPG 105 (243)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 98887654
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.90 E-value=0.025 Score=33.76 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=57.6
Q ss_pred cCCCeEEcCCCCEEEEE-c-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecC-CcEEEEeCC
Q 033738 9 VSSPPAFSNDVKRLLVC-T-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-ETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~ 85 (112)
... +++++.+..|+.. . .+.|.+++++.......+.........+++.|.+. .++.+.... +.|...++.
T Consensus 79 p~g-lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g------~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 79 PDG-LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG------FMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CCE-EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT------EEEEEECSSSCEEEEEETT
T ss_pred cCE-EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC------EEEEEccCCCCeEEEEcCC
Confidence 344 7787766666555 3 68999999875432222332334568899998653 133343333 678888875
Q ss_pred CCceEEEEec-C-CCEEEEEEcCCCcEeC
Q 033738 86 TPELLKTIDV-K-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 86 ~~~~~~~~~~-~-~~v~~~~~~~~~~~~~ 112 (112)
|.....+.. . .....+++++++..||
T Consensus 152 -G~~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 152 -GVDIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp -SCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred -CCCeEEEEECCCCCceEEEEeccCCEEE
Confidence 443333322 2 2678899998776664
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.88 E-value=0.05 Score=36.90 Aligned_cols=97 Identities=9% Similarity=-0.026 Sum_probs=57.8
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCC----ceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTG----LQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
+.. +++++.+..|+... .+.|+.+++... .....+.........+++.+.+. .++++-...+.|.+.
T Consensus 426 ~~g-l~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~------~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 426 VVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS------NIYWTDSVLGTVSVA 498 (791)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT------EEEEEETTTTEEEEE
T ss_pred eEE-EeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCC------cEEEEecCCCeEEEE
Confidence 344 77877666666554 578888887642 11222222334456788887664 255567777899999
Q ss_pred eCCCCceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 83 DFSTPELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 83 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
++........+... .....|++.|.+..||
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LY 529 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMY 529 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEE
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEE
Confidence 98744433333322 2678888888765554
No 263
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.87 E-value=0.0063 Score=40.42 Aligned_cols=97 Identities=9% Similarity=-0.046 Sum_probs=55.6
Q ss_pred CcCCCeEEcCCCCEEEEEc--CCeEEEEeCCC----CceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT--SNTVSIFSTST----GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.+.. ++|++.+..|+.+. .+.|+.+++.. ......+.........+++.+.+. .++++-...+.|.+
T Consensus 407 ~p~g-la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g------~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 407 NVVA-LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS------NIYWTDSVLGTVSV 479 (699)
T ss_dssp TCCC-CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSS------BCEECCTTTSCEEE
T ss_pred ceEE-EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCC------cEEEEeccCCeEEE
Confidence 3455 88998888887776 58899888874 221222221122234677765442 14446566788999
Q ss_pred EeCCCCceEEEEecC-CCEEEEEEcCCCcEe
Q 033738 82 WDFSTPELLKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
+++........+... .....+++.|.+..|
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~l 510 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFM 510 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCC
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcE
Confidence 988754333333222 245667777765544
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.74 E-value=0.031 Score=35.03 Aligned_cols=95 Identities=19% Similarity=0.215 Sum_probs=52.6
Q ss_pred cCCCeEEcCCCCEEEEEcC----C-eEEEEeCCCCce-eeeccccCCceEEEEEec-CCCCccceeEEEEeeecCCcEEE
Q 033738 9 VSSPPAFSNDVKRLLVCTS----N-TVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVP-ASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~----~-~v~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
... ++++++|+++++... . .+...+...+.. ...+. .......++++| ++. ++++...++.|+.
T Consensus 184 P~g-iavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~-------lyv~d~~~~~V~~ 254 (433)
T 4hw6_A 184 CAD-VNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGK-------IYYTRYHHAMISS 254 (433)
T ss_dssp EEE-EEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCC-------EEECBTTCSEEEE
T ss_pred ccE-EEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCe-------EEEEECCCCEEEE
Confidence 445 888999884444432 1 233333222111 01111 122335678888 563 5556667789999
Q ss_pred EeCCCCceEEEE-ecCC--CEEEEEEcCCCcEeC
Q 033738 82 WDFSTPELLKTI-DVKF--PIFSMVRGKKGFAVF 112 (112)
Q Consensus 82 ~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~~~ 112 (112)
+|..++.....+ .... ....++++|+|+.||
T Consensus 255 ~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 255 YDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp ECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred EECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 998877652322 2221 344699999998654
No 265
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.74 E-value=0.012 Score=38.87 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=19.7
Q ss_pred CEEEEEc-CCeEEEEeCCCCceeeec
Q 033738 20 KRLLVCT-SNTVSIFSTSTGLQISSL 44 (112)
Q Consensus 20 ~~l~~~~-~~~v~~~~~~~~~~~~~~ 44 (112)
..++.++ ++.++++|..+++.+..+
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccc
Confidence 5667777 899999999999876544
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.70 E-value=0.045 Score=33.88 Aligned_cols=94 Identities=12% Similarity=0.044 Sum_probs=56.7
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee-ecCCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA-SLDETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~ 89 (112)
+++.+.+..|+... .+.|.+.+++.......+.........+++.|.+. .++.+- +..+.|...++.....
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g------~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG------FMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT------EEEEEECSSSCCEEEEETTSCSC
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC------eEEEEeCCCCCEEEEEeCCCCcc
Confidence 67777555555554 58888888875543333333334468899998653 133333 3347888888764333
Q ss_pred EEEEecC-CCEEEEEEcCCCcEeC
Q 033738 90 LKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 90 ~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
....... .....+++++++..||
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEE
Confidence 2222322 3778889988776664
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.62 E-value=0.036 Score=36.32 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=42.1
Q ss_pred CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC--CEEEEEEc
Q 033738 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF--PIFSMVRG 105 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~ 105 (112)
+.+.-||+.+++..-..+.. .+...-.....+. .++.++.|+.++.+|.++|+.+..++.+. ...-+.+.
T Consensus 453 G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg-------~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~ 524 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMER-FAVWGGTMATAGD-------LVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYT 524 (599)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CeEEEEECCCCCEEeEecCC-CCccCcceEecCC-------EEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEE
Confidence 46777777777655444311 1111111122332 34457889999999999999998887654 12223444
Q ss_pred CCCc
Q 033738 106 KKGF 109 (112)
Q Consensus 106 ~~~~ 109 (112)
.+|+
T Consensus 525 ~~G~ 528 (599)
T 1w6s_A 525 HKGT 528 (599)
T ss_dssp ETTE
T ss_pred eCCE
Confidence 5554
No 268
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.61 E-value=0.076 Score=35.32 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=51.9
Q ss_pred eEEcCCCCEEEEEc-CC-------------------eEEEEeCCCCceeeeccc--cC-------CceEEEEEecCCCCc
Q 033738 13 PAFSNDVKRLLVCT-SN-------------------TVSIFSTSTGLQISSLEG--HT-------APVTTVIVVPASTPA 63 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~-------------------~v~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~~~ 63 (112)
++++|++..++.+. ++ .|..+|.++++..-.+.. +. .+........++.
T Consensus 240 ~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~-- 317 (689)
T 1yiq_A 240 FAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK-- 317 (689)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE--
T ss_pred eeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc--
Confidence 78889888888887 54 499999999987765543 21 1111222223441
Q ss_pred cceeEEEEeeecCCcEEEEeCCCCceEEEEe
Q 033738 64 TKILSYCWTASLDETIKYWDFSTPELLKTID 94 (112)
Q Consensus 64 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 94 (112)
.. ..++.++.+|.++.+|.++|+.+....
T Consensus 318 -~~-~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 318 -PR-KVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp -EE-EEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred -EE-EEEEEECCCCeEEEEECCCCCEecccc
Confidence 01 145678899999999999999875443
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.55 E-value=0.051 Score=32.61 Aligned_cols=93 Identities=5% Similarity=-0.096 Sum_probs=54.7
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCcee-eeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQI-SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 89 (112)
++|++.++.|+... .+.|..++++..... ..+...-.....+++.+.+. .++.+-...+.|.+++......
T Consensus 40 ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g------~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 40 VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE------KLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT------EEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC------eEEEEECCCCEEEEEECCCCcE
Confidence 77888766676665 588888887755321 12222223346788886543 2455666678899998864332
Q ss_pred EEEEecC-CCEEEEEEcCCCcEe
Q 033738 90 LKTIDVK-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 90 ~~~~~~~-~~v~~~~~~~~~~~~ 111 (112)
....... .....+++.|.+..+
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~l 136 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFM 136 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEE
Confidence 2222222 266777887765444
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.50 E-value=0.043 Score=36.32 Aligned_cols=62 Identities=6% Similarity=0.011 Sum_probs=43.0
Q ss_pred CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecCC
Q 033738 28 NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVKF 97 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 97 (112)
+.|..||+.+++..-...... +.....+...+. +++.++.|+.++.||.++|+.+..+..+.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg-------~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGN-------LVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-------EEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCC-------EEEEECCcccchhhhhhcChhheEecCCC
Confidence 779999999998765554322 222223334443 45567899999999999999988886553
No 271
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.43 E-value=0.0095 Score=39.60 Aligned_cols=93 Identities=12% Similarity=-0.016 Sum_probs=50.8
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeec-CCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL-DETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~ 89 (112)
+++.+.+..|+.+. .+.|.++++........+.........+++.|.+. . ++++... .+.|..+++.. ..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g---~---ly~td~~~~~~I~~~~~dG-~~ 530 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHG---F---MYWTDWGTPAKIKKGGLNG-VD 530 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSS---C---CEECCCSSSCCEEBCCSSS-CC
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCC---c---EEEcccCCCCeEEEEeCCC-CC
Confidence 67775555555553 58899998875433333332223446788888653 1 2333322 36777777653 22
Q ss_pred EEEEe-cC-CCEEEEEEcCCCcEeC
Q 033738 90 LKTID-VK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 90 ~~~~~-~~-~~v~~~~~~~~~~~~~ 112 (112)
...+. .. .....|+++|++..||
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEE
T ss_pred eeEEEeCCCCCccEEEEeccCCEEE
Confidence 22221 11 2556788887766554
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.30 E-value=0.077 Score=31.86 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=55.0
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee-ecCCcEEEEeCCCCce
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA-SLDETIKYWDFSTPEL 89 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~ 89 (112)
+++.+.+..|+... .+.|.+++++.......+.........+++.|.+. .++.+. +..+.|...++. |..
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g------~ly~td~~~~~~I~r~~~d-G~~ 156 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG------FMYWTDWGEVPKIERAGMD-GSS 156 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGT------EEEEEECSSSCEEEEEETT-SCS
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCC------EEEEEecCCCCEEEEEEcC-CCC
Confidence 77777665555553 58899998875432222223334567899998653 133333 335778888876 333
Q ss_pred EEEE-ecC-CCEEEEEEcCCCcEeC
Q 033738 90 LKTI-DVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 90 ~~~~-~~~-~~v~~~~~~~~~~~~~ 112 (112)
...+ ... .....+++++++..||
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~~~lY 181 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEEQKLY 181 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eEEEEECCCCCccEEEEeccCCEEE
Confidence 3333 222 2678899998776654
No 273
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.26 E-value=0.13 Score=34.00 Aligned_cols=97 Identities=9% Similarity=-0.059 Sum_probs=59.6
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
... ++|++.+..++.+. ++.|+.++++.......+.........+++.+.+. .++.+-...+.|.+.++..
T Consensus 39 ~~~-l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~------~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 39 ASA-LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK------NLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT------EEEEEETTTTEEEEEETTS
T ss_pred eEE-EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC------EEEEEECCCCEEEEEecCC
Confidence 345 88898877777665 68999888875433233332223456788876653 2445666678899988864
Q ss_pred CceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 87 PELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 87 ~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
.......... .....+++.|....||
T Consensus 112 ~~~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 112 QHRQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp TTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred CcEEEEEeCCCCCcccEEEccCCCeEE
Confidence 4332222222 2677888888554443
No 274
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.25 E-value=0.069 Score=35.09 Aligned_cols=66 Identities=15% Similarity=0.093 Sum_probs=47.3
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCce-------------eeeccccCCceEEEEEecCCCCccceeEEEEeeecCC
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQ-------------ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDE 77 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (112)
+..+|||++++.++ +.++.++|.+.... ..... -.......+|.+++. .+.+---|.
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~-------aYTtlfidS 399 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGN-------AYTTLFIDS 399 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSE-------EEEEETTTT
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCc-------eEeeeeecc
Confidence 78999999998887 79999999874211 12222 233456778988883 344666899
Q ss_pred cEEEEeCCC
Q 033738 78 TIKYWDFST 86 (112)
Q Consensus 78 ~i~~~~~~~ 86 (112)
++..|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999864
No 275
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.22 E-value=0.081 Score=31.39 Aligned_cols=93 Identities=11% Similarity=0.004 Sum_probs=53.3
Q ss_pred cCCCeEEcC-CCCEEEEEc------------------CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEE
Q 033738 9 VSSPPAFSN-DVKRLLVCT------------------SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSY 69 (112)
Q Consensus 9 v~~~~~~~~-~~~~l~~~~------------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 69 (112)
... +++.+ +|+..++.. ++.+..+|..+++... +.........+++++++. .+
T Consensus 128 p~~-i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~p~gia~~~dg~------~l 199 (322)
T 2fp8_A 128 LYA-VTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL-LLKELHVPGGAEVSADSS------FV 199 (322)
T ss_dssp EEE-EEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE-EEEEESCCCEEEECTTSS------EE
T ss_pred cce-EEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE-eccCCccCcceEECCCCC------EE
Confidence 344 78888 887766543 2568888876664322 211122345789999984 23
Q ss_pred EEeeecCCcEEEEeCCCCc--eEEEE-ecCCCEEEEEEcCCCcE
Q 033738 70 CWTASLDETIKYWDFSTPE--LLKTI-DVKFPIFSMVRGKKGFA 110 (112)
Q Consensus 70 ~~~~~~d~~i~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~ 110 (112)
+++....+.|+.+++.... ....+ .... ...+++.++|++
T Consensus 200 yv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 200 LVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHF 242 (322)
T ss_dssp EEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCE
T ss_pred EEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCE
Confidence 4455667889999876421 11111 1122 555666666653
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.04 E-value=0.07 Score=34.25 Aligned_cols=96 Identities=13% Similarity=0.172 Sum_probs=56.1
Q ss_pred cCCCeEE-------cCCCCEEEEEc-CC-------eEEEEeCCC-Ccee-----eeccccCCceEEEEEecCCCCcccee
Q 033738 9 VSSPPAF-------SNDVKRLLVCT-SN-------TVSIFSTST-GLQI-----SSLEGHTAPVTTVIVVPASTPATKIL 67 (112)
Q Consensus 9 v~~~~~~-------~~~~~~l~~~~-~~-------~v~~~~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~ 67 (112)
... ++| +++|+.|+.+. .+ .+.+++... +... ..+... .....++.+|++.
T Consensus 188 p~~-ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g------ 259 (496)
T 3kya_A 188 IRS-IAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPING------ 259 (496)
T ss_dssp EEE-EEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTC------
T ss_pred CcE-EEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCC------
Confidence 344 788 99999776665 22 256665333 2211 122211 2235678888543
Q ss_pred EEEEeeecCCcEEEEeCC-------CCce-----------EEE-Eec--CCCEEEEEEcCCCcEeC
Q 033738 68 SYCWTASLDETIKYWDFS-------TPEL-----------LKT-IDV--KFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 68 ~~~~~~~~d~~i~~~~~~-------~~~~-----------~~~-~~~--~~~v~~~~~~~~~~~~~ 112 (112)
.++++...++.|+.+|+. ++.. ... +.. ....+.++|+|+|+.+|
T Consensus 260 ~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 260 ELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp CEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred eEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEE
Confidence 245566778889999987 4543 112 222 23567899999998653
No 277
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.02 E-value=0.093 Score=30.30 Aligned_cols=92 Identities=7% Similarity=-0.072 Sum_probs=54.4
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCce------eeecc-ccCCceEEEEEecCCCCccceeEEEEeeecCCcEE
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQ------ISSLE-GHTAPVTTVIVVPASTPATKILSYCWTASLDETIK 80 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 80 (112)
.+.. ++++|+|.+.+. .++.+...+..+... -..+- ..-....++.+.|++. ++++ .|+.|+
T Consensus 42 ~~~~-laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-------LYav--~dG~iy 110 (236)
T 1tl2_A 42 NFKF-LFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-------LYAV--SKDKLY 110 (236)
T ss_dssp TCSE-EEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-------EEEE--ETTEEE
T ss_pred ccee-EEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-------EEEe--CCCEEE
Confidence 5566 999999987666 778888777654211 11110 0111146788899984 3334 669998
Q ss_pred EEeCCCCce------EEEEecCC--CEEEEEEcCCCcE
Q 033738 81 YWDFSTPEL------LKTIDVKF--PIFSMVRGKKGFA 110 (112)
Q Consensus 81 ~~~~~~~~~------~~~~~~~~--~v~~~~~~~~~~~ 110 (112)
-++-.+... -.++.... .+..+.+.|+|.+
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~L 148 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYL 148 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceE
Confidence 887643211 12222222 6778888888764
No 278
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.97 E-value=0.12 Score=31.22 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=45.1
Q ss_pred CCCEEEEEc-CCeEEEEeCCCCceeeecccc---------CCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCC
Q 033738 18 DVKRLLVCT-SNTVSIFSTSTGLQISSLEGH---------TAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTP 87 (112)
Q Consensus 18 ~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 87 (112)
++..++.++ ++.+..+|.++++........ ...+...-...++ .++.++.++.+..+|..+|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~v~v~~~~g~l~a~d~~tG 123 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGG--------HVYIGSEKAQVYALNTSDG 123 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETT--------EEEEEETTSEEEEEETTTC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCC--------EEEEEcCCCEEEEEECCCC
Confidence 345666666 789999999988766544431 1222221112233 3446777899999999999
Q ss_pred ceEEEEecC
Q 033738 88 ELLKTIDVK 96 (112)
Q Consensus 88 ~~~~~~~~~ 96 (112)
+.+......
T Consensus 124 ~~~W~~~~~ 132 (376)
T 3q7m_A 124 TVAWQTKVA 132 (376)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEeCC
Confidence 877665543
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.93 E-value=0.19 Score=33.12 Aligned_cols=97 Identities=5% Similarity=-0.084 Sum_probs=57.2
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCce-eeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQ-ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
... +++++.+..|+.+. .+.|..++++.... ...+.........+++.+.+. .++.+-...+.|.+.+..
T Consensus 42 ~~~-ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~------~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 42 AAA-VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE------KLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp EEE-EEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT------EEEEEETTTTEEEEEETT
T ss_pred eEE-EEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC------EEEEEeCCCCEEEEEECC
Confidence 344 78888777777665 58888888765421 222332324567899988654 255566777899999987
Q ss_pred CCceEEEEecC-CCEEEEEEcCCCcEeC
Q 033738 86 TPELLKTIDVK-FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 86 ~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 112 (112)
........... .....+++.|.+..+|
T Consensus 115 G~~~~~l~~~~l~~P~~Iavdp~~g~ly 142 (619)
T 3s94_A 115 GSLRKVLFWQELDQPRAIALDPSSGFMY 142 (619)
T ss_dssp SCSCEEEECSSCSCCCCEEEETTTTEEE
T ss_pred CCCEEEEEeCCCCCCceEEEecCCCeEE
Confidence 44332222222 2566777877655443
No 280
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.86 E-value=0.059 Score=32.59 Aligned_cols=27 Identities=4% Similarity=0.074 Sum_probs=21.4
Q ss_pred EEEeeecCCcEEEEeCCCCceEEEEec
Q 033738 69 YCWTASLDETIKYWDFSTPELLKTIDV 95 (112)
Q Consensus 69 ~~~~~~~d~~i~~~~~~~~~~~~~~~~ 95 (112)
.++.++.++.++.+|..+|+.+.....
T Consensus 320 ~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 320 NLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 344677789999999999988777665
No 281
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.81 E-value=0.15 Score=31.16 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=56.2
Q ss_pred cCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCce--eeec----cccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQ--ISSL----EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~--~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
-.. +++.|||+.+++-. .+.|++++...++. +..+ ....+....++++|+-..+..+. ...+...+..|.-
T Consensus 34 P~~-ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY-v~yt~~~~~~v~R 111 (347)
T 3das_A 34 PWG-LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY-AYFTSASDNRIVR 111 (347)
T ss_dssp EEE-EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE-EEEECSSSEEEEE
T ss_pred ceE-EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEE-EEEecCCCCEEEE
Confidence 344 88999999888887 79999998665542 1112 12345678999999621001122 1122223445555
Q ss_pred EeCCCC----------ceE-EEEec--CCCEEEEEEcCCCcEe
Q 033738 82 WDFSTP----------ELL-KTIDV--KFPIFSMVRGKKGFAV 111 (112)
Q Consensus 82 ~~~~~~----------~~~-~~~~~--~~~v~~~~~~~~~~~~ 111 (112)
|.+..+ +.+ ..+.. ......+.|.|+|.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Ly 154 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLY 154 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEE
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEE
Confidence 554431 111 11221 1145678999998643
No 282
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.72 E-value=0.17 Score=30.89 Aligned_cols=94 Identities=15% Similarity=0.050 Sum_probs=53.0
Q ss_pred CCCeEEcCCCCEEEEEcCCeEEEEeCCCCc-eeeec---cccCCceEEEEEecC---CCCccceeEEEEeee---cC---
Q 033738 10 SSPPAFSNDVKRLLVCTSNTVSIFSTSTGL-QISSL---EGHTAPVTTVIVVPA---STPATKILSYCWTAS---LD--- 76 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~---~d--- 76 (112)
.. ++|.|+|+.+++-.++.|++++. .++ .+..+ .........++++|+ +. . ++++.. .+
T Consensus 32 ~~-ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g---~---lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 32 WS-IAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKS---W---VYLYASYFAEGGHI 103 (354)
T ss_dssp EE-EEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSC---E---EEEEEEEECGGGCE
T ss_pred eE-EEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCC---E---EEEEEeccCCCCCc
Confidence 44 88999998666665899998873 343 22221 122345789999997 32 1 222322 12
Q ss_pred -CcEEEEeCCCC--c-----eE-EEEecC--CCEEEEEEcCCCcEe
Q 033738 77 -ETIKYWDFSTP--E-----LL-KTIDVK--FPIFSMVRGKKGFAV 111 (112)
Q Consensus 77 -~~i~~~~~~~~--~-----~~-~~~~~~--~~v~~~~~~~~~~~~ 111 (112)
..|..++...+ . .+ ..+... .....++|.|+|...
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLY 149 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEE
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEE
Confidence 45666766543 1 11 112211 134678999998643
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.27 E-value=0.26 Score=30.11 Aligned_cols=94 Identities=10% Similarity=0.022 Sum_probs=59.6
Q ss_pred CCCeEE---cCCCCEEEEEc--------------CCeEEEEeCC---CCceeeecc--c-----------cCCceEEEEE
Q 033738 10 SSPPAF---SNDVKRLLVCT--------------SNTVSIFSTS---TGLQISSLE--G-----------HTAPVTTVIV 56 (112)
Q Consensus 10 ~~~~~~---~~~~~~l~~~~--------------~~~v~~~~~~---~~~~~~~~~--~-----------~~~~v~~~~~ 56 (112)
.. +.| .|+++++++.. +..+..+|+. +++...... . .......++.
T Consensus 66 sG-l~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 66 SG-LSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EE-EEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eE-EEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 45 788 68877776432 3668899998 665443222 1 1124678999
Q ss_pred ecCCCCccceeEEEEeeecC-CcEEEEeCCCCceEEEEecCC-------CEEEEEEcCCCcEeC
Q 033738 57 VPASTPATKILSYCWTASLD-ETIKYWDFSTPELLKTIDVKF-------PIFSMVRGKKGFAVF 112 (112)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~ 112 (112)
.++++ .+++++.. +.|...+... +.+..+.... ..+.++++|+|+.|+
T Consensus 145 D~~Gn-------aYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Li 200 (334)
T 2p9w_A 145 DRDGN-------SYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLI 200 (334)
T ss_dssp CTTSC-------EEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEE
T ss_pred CCCCC-------EEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEE
Confidence 99996 56677777 7777777653 3333322111 356889999998663
No 284
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.24 E-value=0.37 Score=31.80 Aligned_cols=92 Identities=8% Similarity=-0.080 Sum_probs=56.2
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceE
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELL 90 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 90 (112)
+++++.+..|+.+. .+.|+.++++.......+...-.....+++...+. .++.+-...+.|.+.++.... .
T Consensus 354 ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~------~lY~tD~~~~~I~v~~~~G~~-~ 426 (619)
T 3s94_A 354 IDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVAR------NLYWTDTGTDRIEVTRLNGTM-R 426 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT------EEEEEETTTTEEEEEETTSCS-C
T ss_pred EEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccC------cEEEEeCCCCcEEEEeCCCCe-E
Confidence 67777666666554 58888888765432223332223456888876543 255566677889998887443 3
Q ss_pred EEEec-C-CCEEEEEEcCCCcEe
Q 033738 91 KTIDV-K-FPIFSMVRGKKGFAV 111 (112)
Q Consensus 91 ~~~~~-~-~~v~~~~~~~~~~~~ 111 (112)
..+.. . .....+++.|....+
T Consensus 427 ~~l~~~~l~~P~~iavdp~~G~l 449 (619)
T 3s94_A 427 KILISEDLEEPRAIVLDPMVGYM 449 (619)
T ss_dssp EEEECTTCCSEEEEEEETTTTEE
T ss_pred EEEEECCCCCeeeEEEEcCCCcE
Confidence 33332 2 267888888864433
No 285
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.22 E-value=0.26 Score=29.95 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=52.9
Q ss_pred CCCeEEcCCCCEEEEEcCCeEEEEeCCCCce--eeec---cccCCceEEEEEecC---CCCccceeEEEEeeecC-----
Q 033738 10 SSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQ--ISSL---EGHTAPVTTVIVVPA---STPATKILSYCWTASLD----- 76 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~--~~~~---~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~d----- 76 (112)
.. +++.|+|+.+++-..+.|++++ .++. +..+ .........++++|+ +. . ++++....
T Consensus 34 ~~-ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g----~--lYv~~~~~~~~~~ 104 (352)
T 2ism_A 34 WA-LAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEP----Y--VYAYRTVAEGGLR 104 (352)
T ss_dssp EE-EEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSC----E--EEEEEEECTTSSE
T ss_pred eE-EEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCC----E--EEEEEecCCCCCc
Confidence 44 8899999966665589999988 3321 1111 122345689999998 32 1 22333322
Q ss_pred CcEEEEeCCCCc-----eE-EEEec--C--CCEEEEEEcCCCcE
Q 033738 77 ETIKYWDFSTPE-----LL-KTIDV--K--FPIFSMVRGKKGFA 110 (112)
Q Consensus 77 ~~i~~~~~~~~~-----~~-~~~~~--~--~~v~~~~~~~~~~~ 110 (112)
..|..++...+. .+ ..+.. . .....++|.|+|..
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~L 148 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGML 148 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCE
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCE
Confidence 567777766431 11 11321 1 13467899999854
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.03 E-value=0.27 Score=29.03 Aligned_cols=72 Identities=10% Similarity=-0.038 Sum_probs=46.0
Q ss_pred cCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeec-C-CcEEEEeCC
Q 033738 9 VSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL-D-ETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-d-~~i~~~~~~ 85 (112)
... ++|+++|+.+++.. ++.|..+|.+.. ....+. .......+++.+++. ++++... + ..+..+|..
T Consensus 34 peg-ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~-------l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 34 LEN-LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGD-------LVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp EEE-EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSC-------EEEEEECTTSCEEEEEECT
T ss_pred cce-EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCc-------EEEEeccCCcceEEEEcCC
Confidence 344 78999998666665 789999997743 333332 234578899999984 3334433 2 246667777
Q ss_pred CCceE
Q 033738 86 TPELL 90 (112)
Q Consensus 86 ~~~~~ 90 (112)
+++..
T Consensus 104 ~g~~~ 108 (306)
T 2p4o_A 104 DGTVE 108 (306)
T ss_dssp TSCEE
T ss_pred CCeEE
Confidence 77653
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.80 E-value=0.52 Score=31.20 Aligned_cols=97 Identities=10% Similarity=-0.015 Sum_probs=58.0
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEee-ecCCcEEEEeCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTA-SLDETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~ 85 (112)
... +++.+.+..|+.+. .+.|.+.+++.......+...-.....+++.|... .++.+- +..+.|...++.
T Consensus 82 P~G-lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G------~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 82 PEG-MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG------FMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp CCE-EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTT------EEEEEECSSSCEEEEEETT
T ss_pred cce-EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCC------eEEEeCCCCCCEEEEEeCC
Confidence 444 77877766666654 58899999875432222223334457999998543 123333 335678777776
Q ss_pred CCceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 86 TPELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
..........-.....+++.+++..||
T Consensus 155 G~~~~~l~~~~~~P~GlalD~~~~~LY 181 (628)
T 4a0p_A 155 GSERTTLVPNVGRANGLTIDYAKRRLY 181 (628)
T ss_dssp SCSCEEEECSCSSEEEEEEETTTTEEE
T ss_pred CCceEEEECCCCCcceEEEccccCEEE
Confidence 443333333233778888888776654
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.69 E-value=0.39 Score=29.32 Aligned_cols=99 Identities=3% Similarity=0.116 Sum_probs=61.9
Q ss_pred CCCCCcCCCeEEcCCCCEEEEEc--CCeEEEEeCCCCceee-eccc----cCC--ceEEEEE---ecCCCCccceeEEEE
Q 033738 4 GGRSYVSSPPAFSNDVKRLLVCT--SNTVSIFSTSTGLQIS-SLEG----HTA--PVTTVIV---VPASTPATKILSYCW 71 (112)
Q Consensus 4 ~h~~~v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~-~~~~----~~~--~v~~~~~---~~~~~~~~~~~~~~~ 71 (112)
....+-.+ ++|++.+..+..++ .+.|..|+...+.... .+.. ... ....+.| .|+++ +++
T Consensus 10 ~~~~yPE~-~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-------L~v 81 (334)
T 2p9w_A 10 VKNLTPED-TIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-------LFA 81 (334)
T ss_dssp CTTCCCSC-EEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-------EEE
T ss_pred CcccCCcC-ccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-------EEE
Confidence 33445555 99998777777776 7999999987553222 2221 111 3468888 57763 222
Q ss_pred eee-------------cCCcEEEEeCC---CCceEEEEecC------------C--CEEEEEEcCCCcE
Q 033738 72 TAS-------------LDETIKYWDFS---TPELLKTIDVK------------F--PIFSMVRGKKGFA 110 (112)
Q Consensus 72 ~~~-------------~d~~i~~~~~~---~~~~~~~~~~~------------~--~v~~~~~~~~~~~ 110 (112)
... .+..+..+|+. +++.+...... . ....++..++|+.
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 222 25779999998 77766555421 1 4777888888763
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.69 E-value=0.44 Score=29.86 Aligned_cols=70 Identities=7% Similarity=-0.049 Sum_probs=45.4
Q ss_pred cCCCeEEcC-CCCEEEEEc-CCeEEEEeCCCCceeeeccc-cCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 9 VSSPPAFSN-DVKRLLVCT-SNTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 9 v~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
... ++++| +|..+++-. ++.|..++...+........ .......++++|+++ .++++....+.|+.++..
T Consensus 228 p~g-iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~------~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNG-AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGN------YAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCC-EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSS------EEEEEETTTTEEEEEEEE
T ss_pred ceE-EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCC------EEEEEECCCCEEEEEeCC
Confidence 345 88999 566555554 68999999886643222221 123457899999985 234466667888887754
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.68 E-value=0.33 Score=31.99 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=42.7
Q ss_pred eEEcC-CCCEEEEEc-CC-----------eEEEEeCCCCcee--eeccc-cCCceEEEEEecCCCCccceeEEEEeee-c
Q 033738 13 PAFSN-DVKRLLVCT-SN-----------TVSIFSTSTGLQI--SSLEG-HTAPVTTVIVVPASTPATKILSYCWTAS-L 75 (112)
Q Consensus 13 ~~~~~-~~~~l~~~~-~~-----------~v~~~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (112)
.++.+ +++.++.|+ +. .+.+||..+.+.. ..... +.......++..++. +++.++ .
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-------lyv~GG~~ 263 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-------IVVTGGND 263 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-------EEEECSSS
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-------EEEeCCCC
Confidence 56667 788888775 21 5889998776422 12211 222223456667774 555666 4
Q ss_pred CCcEEEEeCCCCceE
Q 033738 76 DETIKYWDFSTPELL 90 (112)
Q Consensus 76 d~~i~~~~~~~~~~~ 90 (112)
+..+.+||..+....
T Consensus 264 ~~~v~~yd~~t~~W~ 278 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWI 278 (656)
T ss_dssp TTCEEEEEGGGTEEE
T ss_pred CCceEEecCcCCcee
Confidence 568999998876543
No 291
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.59 E-value=0.49 Score=29.98 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=33.3
Q ss_pred cCCCeEEcCCCCEEEEEcC-CeEEEEeCCCCcee--eeccc------cCCceEEEEEecC
Q 033738 9 VSSPPAFSNDVKRLLVCTS-NTVSIFSTSTGLQI--SSLEG------HTAPVTTVIVVPA 59 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~-~~v~~~~~~~~~~~--~~~~~------~~~~v~~~~~~~~ 59 (112)
... ++|.|+|+.+++-.. +.|+.++..+++.. ..+.. ..+....++++|+
T Consensus 29 P~~-~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 29 PHA-LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp EEE-EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred ceE-EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 344 899999998887775 57888876544322 22221 2455679999995
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.44 E-value=0.41 Score=31.20 Aligned_cols=27 Identities=15% Similarity=0.069 Sum_probs=19.7
Q ss_pred CCC---EEEEEc-CCeEEEEeCCCCceeeec
Q 033738 18 DVK---RLLVCT-SNTVSIFSTSTGLQISSL 44 (112)
Q Consensus 18 ~~~---~l~~~~-~~~v~~~~~~~~~~~~~~ 44 (112)
+|+ .++.++ ++.+..+|..+++.+...
T Consensus 312 ~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 312 NGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 563 455666 799999999988766443
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.36 E-value=0.4 Score=28.02 Aligned_cols=61 Identities=13% Similarity=0.082 Sum_probs=44.9
Q ss_pred eccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecC--CCEEEEEEcCCCcE
Q 033738 43 SLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVK--FPIFSMVRGKKGFA 110 (112)
Q Consensus 43 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~ 110 (112)
.+.+-...+..+++.|++. .+++....++.|...|.. ++.+..+... .....+++.+++.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~------~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~ 83 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSN------TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQF 83 (255)
T ss_dssp ECTTCCSCEEEEEEETTTT------EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEE
T ss_pred ECCCcccCcceeEEeCCCC------EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEE
Confidence 4445556789999999764 345567778899999988 8888877543 37888888877765
No 294
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.81 E-value=0.63 Score=28.31 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=30.3
Q ss_pred eEEcCCCC-EEEEEcCCeEEEEeCCCCcee---eec----cccCCceEEEEEecC
Q 033738 13 PAFSNDVK-RLLVCTSNTVSIFSTSTGLQI---SSL----EGHTAPVTTVIVVPA 59 (112)
Q Consensus 13 ~~~~~~~~-~l~~~~~~~v~~~~~~~~~~~---~~~----~~~~~~v~~~~~~~~ 59 (112)
+++.|+|+ .+++-..+.|++++.. +... ..+ ....+....++++|+
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 88999999 6665558999998854 3211 111 122345688999996
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.80 E-value=0.52 Score=28.99 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=33.9
Q ss_pred cCCCeEEcCCCCEEEEEc--CCeEEEEeCCC-Cce--eeeccccCCceEEEEEec-CCC
Q 033738 9 VSSPPAFSNDVKRLLVCT--SNTVSIFSTST-GLQ--ISSLEGHTAPVTTVIVVP-AST 61 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~--~~~v~~~~~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~ 61 (112)
-+. ++|+||++.++.+. .+.|..|+++. +.. .+.+ ...+..-.+++.+ ++.
T Consensus 223 pNG-ia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 223 ANG-INISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD 279 (355)
T ss_dssp EEE-EEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC
T ss_pred cCc-ceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc
Confidence 345 89999999888775 68999999863 321 1223 2234456788888 474
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.56 E-value=0.64 Score=29.99 Aligned_cols=68 Identities=7% Similarity=0.031 Sum_probs=43.1
Q ss_pred CCCeEEcCCCCEEEEE-c-CCeEEEEeCC-------CCce-----------eee-cc-ccCCceEEEEEecCCCCcccee
Q 033738 10 SSPPAFSNDVKRLLVC-T-SNTVSIFSTS-------TGLQ-----------ISS-LE-GHTAPVTTVIVVPASTPATKIL 67 (112)
Q Consensus 10 ~~~~~~~~~~~~l~~~-~-~~~v~~~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~~~~~~~~~~~ 67 (112)
.. ++++|++..|+.+ . ++.|..+|++ ++.. ... +. ........++++|++.
T Consensus 250 ~g-iavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~------ 322 (496)
T 3kya_A 250 NG-ATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK------ 322 (496)
T ss_dssp CC-EEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS------
T ss_pred eE-EEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC------
Confidence 44 7889965555544 4 6889999987 4432 111 11 1223357899999995
Q ss_pred EEEEeeecCCcEEEEeC
Q 033738 68 SYCWTASLDETIKYWDF 84 (112)
Q Consensus 68 ~~~~~~~~d~~i~~~~~ 84 (112)
.++++-...+.|+.++.
T Consensus 323 ~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 323 YAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEec
Confidence 23456667788888654
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.46 E-value=1.1 Score=29.85 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=52.5
Q ss_pred CeEEcCCCCEEEEEc-CC-------------------eEEEEeCCCCceeeeccc--cC-------CceEEEEEecCCCC
Q 033738 12 PPAFSNDVKRLLVCT-SN-------------------TVSIFSTSTGLQISSLEG--HT-------APVTTVIVVPASTP 62 (112)
Q Consensus 12 ~~~~~~~~~~l~~~~-~~-------------------~v~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~~ 62 (112)
+++++|++..++.+. ++ .|..+|.++++..-.+.. +. .+.....+..++.
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~- 312 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK- 312 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE-
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc-
Confidence 378888888888776 54 489999999987755543 21 2222223333552
Q ss_pred ccceeEEEEeeecCCcEEEEeCCCCceEEEEe
Q 033738 63 ATKILSYCWTASLDETIKYWDFSTPELLKTID 94 (112)
Q Consensus 63 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 94 (112)
.. ..++.++.+|.++++|..+|+.+...+
T Consensus 313 --~~-~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 313 --PR-KVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp --EE-EEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred --EE-EEEEEECCCCEEEEEECCCCCEecccc
Confidence 11 145688899999999999999875544
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.29 E-value=1.1 Score=29.53 Aligned_cols=77 Identities=10% Similarity=-0.016 Sum_probs=49.5
Q ss_pred eEEcCCCCEEEEEc-C----------------CeEEEEeCCCCceeeeccc--cC--------CceEEEEEe-cCCCCcc
Q 033738 13 PAFSNDVKRLLVCT-S----------------NTVSIFSTSTGLQISSLEG--HT--------APVTTVIVV-PASTPAT 64 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~----------------~~v~~~~~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~~~~ 64 (112)
+++.++...++.+. + +.|.-+|.++++..-.+.. |. .++. +... .++.
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~--- 321 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGK--- 321 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSC---
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCc---
Confidence 56777777777765 4 3789999999987655442 21 1111 2222 3442
Q ss_pred ceeEEEEeeecCCcEEEEeCCCCceEEEEe
Q 033738 65 KILSYCWTASLDETIKYWDFSTPELLKTID 94 (112)
Q Consensus 65 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 94 (112)
.. ..++.++.++.++.+|.++|+.+....
T Consensus 322 ~~-~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 322 AR-KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EE-EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EE-EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 11 144567889999999999999887665
No 299
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.20 E-value=0.95 Score=28.45 Aligned_cols=69 Identities=12% Similarity=0.017 Sum_probs=44.1
Q ss_pred CCCeEEcC-CCCEEEEEc-CCeEEEEeCCCCceeeec-cc-cCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 10 SSPPAFSN-DVKRLLVCT-SNTVSIFSTSTGLQISSL-EG-HTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 10 ~~~~~~~~-~~~~l~~~~-~~~v~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
.. ++++| +|.+.++-. ++.|+.++..++.....+ .. ....-..++++|++. .++++-...+.|+.+++.
T Consensus 231 ~g-iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~------~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 231 KT-CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD------WAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CC-CEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS------EEEEEETTTTEEEEEEBC
T ss_pred CE-EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC------EEEEEeCCCCEEEEEeCC
Confidence 44 88898 555554444 689999998866542222 11 112234699999984 244566677889998765
No 300
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.08 E-value=0.68 Score=27.67 Aligned_cols=86 Identities=6% Similarity=-0.017 Sum_probs=46.9
Q ss_pred eEEcCCCCEEEEEc-----CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCC
Q 033738 13 PAFSNDVKRLLVCT-----SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTP 87 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 87 (112)
..++++++.|+... ...|...+++... ...+..+.. .++++++. .++.+......|+..++..+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~------~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDR------YFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETT------EEEEECTTTCCEEEEETTTT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECC------EEEEEeCCCceEEEEECCCC
Confidence 46788888887653 3567777776433 344433322 34566664 12334335678888887765
Q ss_pred ceEEEEecCCCEEEEEEcCCCcEeC
Q 033738 88 ELLKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
.....+. ..... .+.|++.+||
T Consensus 178 ~~~~l~~--~~~~~-~~~P~g~~iy 199 (302)
T 3s25_A 178 SEALFYD--CNCYK-PVVLDDTNVY 199 (302)
T ss_dssp EEEEEEC--SCEEE-EEEEETTEEE
T ss_pred CEEEEeC--CCccc-eeeecCCEEE
Confidence 5433332 22222 2447776654
No 301
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.96 E-value=0.88 Score=31.72 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=25.0
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeee
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISS 43 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~ 43 (112)
+...++..++.+-+ |+++|+|++.+++++..
T Consensus 241 ~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 241 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 55666778888888 99999999998876544
No 302
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.65 E-value=0.57 Score=32.62 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=29.0
Q ss_pred eEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEe
Q 033738 51 VTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTID 94 (112)
Q Consensus 51 v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 94 (112)
+.+++..++.. ++.+-+.|+++|+|++.++.++.+..
T Consensus 238 ~~~~~~~~~~~-------~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYN-------VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTT-------EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCc-------EEEEEECCCEEEEEECCCCCeEeeec
Confidence 45566666653 67799999999999999999887754
No 303
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.94 E-value=2.1 Score=27.38 Aligned_cols=47 Identities=13% Similarity=0.210 Sum_probs=30.0
Q ss_pred eEEcCCCC--EEEEEcCCeEEEEeCCCCc---eeeecc---------ccCCceEEEEEecC
Q 033738 13 PAFSNDVK--RLLVCTSNTVSIFSTSTGL---QISSLE---------GHTAPVTTVIVVPA 59 (112)
Q Consensus 13 ~~~~~~~~--~l~~~~~~~v~~~~~~~~~---~~~~~~---------~~~~~v~~~~~~~~ 59 (112)
+++.|||. .+++-..+.|++++..... .+..+. ..+.....++++|+
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 78899985 6666558999999754221 111111 11356788999997
No 304
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=89.14 E-value=3.5 Score=27.37 Aligned_cols=56 Identities=11% Similarity=-0.005 Sum_probs=37.8
Q ss_pred eEEEEEecCCCCccceeEEEEeeec-----------CCcEEEEeCCCCceEEEEecC--CCEEEEEEcCCCcEeC
Q 033738 51 VTTVIVVPASTPATKILSYCWTASL-----------DETIKYWDFSTPELLKTIDVK--FPIFSMVRGKKGFAVF 112 (112)
Q Consensus 51 v~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 112 (112)
...+.+.+++. .++.+-.. ...+..++..+|+....+..+ ..++.++|+||++.||
T Consensus 478 PDnL~fd~~G~------LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 478 PDGLGFDKAGR------LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEEEECTTCC------EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCceEECCCCC------EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 45788999885 23434432 125666677778766655543 3789999999999876
No 305
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.02 E-value=1.1 Score=31.85 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=27.1
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeee
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISS 43 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~ 43 (112)
.+.+ +...++..++++-+ |+++|+|++.+++++..
T Consensus 239 ~~vs-~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIIS-MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSC-CEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEE-eeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 3444 66677888888888 99999999998865543
No 306
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.98 E-value=0.73 Score=32.68 Aligned_cols=26 Identities=35% Similarity=0.365 Sum_probs=23.0
Q ss_pred EEEeeecCCcEEEEeCCCCceEEEEe
Q 033738 69 YCWTASLDETIKYWDFSTPELLKTID 94 (112)
Q Consensus 69 ~~~~~~~d~~i~~~~~~~~~~~~~~~ 94 (112)
++++-+.|+++|+|++.++.++.+..
T Consensus 251 ~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 251 VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 66789999999999999999987765
No 307
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=88.91 E-value=2.5 Score=25.28 Aligned_cols=65 Identities=9% Similarity=0.076 Sum_probs=34.4
Q ss_pred EEcCCCCEEEEEc--C-------------CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEe--eecC
Q 033738 14 AFSNDVKRLLVCT--S-------------NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWT--ASLD 76 (112)
Q Consensus 14 ~~~~~~~~l~~~~--~-------------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~d 76 (112)
-++++|..|+... + ..|+..+++..+ ...+... . ...+++++. ++. +.. ....
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~--~--~~~~s~~g~---~Iy--~~~~~~~~~ 128 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPD--P--CIYASLIGN---YIY--YLHYDTQTA 128 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECS--C--EEEEEEETT---EEE--EEEESSSSC
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecC--C--ccEEEEeCC---EEE--EEeecCCCC
Confidence 4678888888775 2 256777776554 2233221 1 235677774 222 222 1344
Q ss_pred CcEEEEeCCCCc
Q 033738 77 ETIKYWDFSTPE 88 (112)
Q Consensus 77 ~~i~~~~~~~~~ 88 (112)
..|+..++....
T Consensus 129 ~~Iy~~~~dGs~ 140 (302)
T 3s25_A 129 TSLYRIRIDGEE 140 (302)
T ss_dssp EEEEEEETTSCC
T ss_pred ceEEEEECCCCC
Confidence 566666776433
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=88.67 E-value=2.9 Score=25.76 Aligned_cols=92 Identities=10% Similarity=0.048 Sum_probs=52.5
Q ss_pred cCCCeEEcCCCCEEEEEc----C--------------CeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEE
Q 033738 9 VSSPPAFSNDVKRLLVCT----S--------------NTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYC 70 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~----~--------------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 70 (112)
..+ +.+.++|.+.++.. | +.+..++. ++ ...+...-...+.++|+|+++ .++
T Consensus 167 pND-~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~------~lY 236 (355)
T 3sre_A 167 VND-IVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGK------YVY 236 (355)
T ss_dssp EEE-EEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSS------EEE
T ss_pred Cce-EEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCC------EEE
Confidence 445 77778887666543 1 33444443 32 222222233457899999986 344
Q ss_pred EeeecCCcEEEEeCCC-Cce--EEEEecCCCEEEEEEcC-CCcE
Q 033738 71 WTASLDETIKYWDFST-PEL--LKTIDVKFPIFSMVRGK-KGFA 110 (112)
Q Consensus 71 ~~~~~d~~i~~~~~~~-~~~--~~~~~~~~~v~~~~~~~-~~~~ 110 (112)
++-+..+.|+.|++.. +.. ...+......-.++..+ +|++
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCE
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcE
Confidence 5666778999999863 332 22333333556667776 4654
No 309
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.12 E-value=4.2 Score=27.00 Aligned_cols=55 Identities=11% Similarity=0.017 Sum_probs=35.7
Q ss_pred EEEEEecCCCCccceeEEEEeeec-----------CCcEEEEeCCCCceEEEEecCC--CEEEEEEcCCCcEeC
Q 033738 52 TTVIVVPASTPATKILSYCWTASL-----------DETIKYWDFSTPELLKTIDVKF--PIFSMVRGKKGFAVF 112 (112)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~ 112 (112)
-.++|+|.+. .++.+-+. +..+...+..+++..+.+..+. .+..++|+||++.+|
T Consensus 479 DNL~fd~~G~------LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 479 DGLGFDKAGR------LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEEECTTCC------EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred cceEECCCCC------EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 5788999985 13333322 1234455666677665555543 899999999998875
No 310
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=86.53 E-value=5.7 Score=26.87 Aligned_cols=95 Identities=8% Similarity=0.068 Sum_probs=55.4
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccc--------cCCceEEEEEecCCCCccceeEEEEeeecCCcE
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEG--------HTAPVTTVIVVPASTPATKILSYCWTASLDETI 79 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i 79 (112)
.|.+ +...++|+.-+...++-+..|+..++........ ....|.++...+++. .+..++.++-+
T Consensus 358 ~V~~-i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-------~lWigt~~~Gl 429 (795)
T 4a2l_A 358 VVSC-IVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKS-------LVYIGTHAGGL 429 (795)
T ss_dssp SEEE-EEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTT-------EEEEEETTTEE
T ss_pred eeEE-EEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCC-------EEEEEeCcCce
Confidence 3554 6666777655544466788888776542221111 134577887777662 23456666678
Q ss_pred EEEeCCCCceEEEEe----c-CCCEEEEEEcCCCcE
Q 033738 80 KYWDFSTPELLKTID----V-KFPIFSMVRGKKGFA 110 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~ 110 (112)
..+|..+++...... . ...|.++...++|..
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 999988765432221 1 126777777766654
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.50 E-value=3.7 Score=24.58 Aligned_cols=93 Identities=6% Similarity=-0.013 Sum_probs=48.9
Q ss_pred CCcCCCeEEcCCCCEEEEEcCCeEEE-EeC--CCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEe
Q 033738 7 SYVSSPPAFSNDVKRLLVCTSNTVSI-FST--STGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWD 83 (112)
Q Consensus 7 ~~v~~~~~~~~~~~~l~~~~~~~v~~-~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 83 (112)
..+.. +.+.+++..++.+.++.+.. .|- .+.+.+. ......+..+.+.+++. ++ ..+.++.+++.+
T Consensus 163 ~~~~~-~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~-------~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 163 GVMRN-LNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGR-------LW-MIVNGGKIAFSD 231 (327)
T ss_dssp CCEEE-EEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSC-------EE-EEETTTEEEEEE
T ss_pred cceEE-EEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCC-------EE-EEeCCceEEEec
Confidence 34555 77888888887776554443 332 2222221 12345577888888773 22 344567777664
Q ss_pred CCCCceEEEEecC-----CCEEEEEEcCCCcE
Q 033738 84 FSTPELLKTIDVK-----FPIFSMVRGKKGFA 110 (112)
Q Consensus 84 ~~~~~~~~~~~~~-----~~v~~~~~~~~~~~ 110 (112)
...|+.-..+..+ ..+.++.+.+++..
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 2223322222211 24677777766554
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.80 E-value=4.8 Score=24.44 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=29.7
Q ss_pred CcCCCeEEcCC---CCEEEEE-c-C-----CeEEEEeCCCCc-----ee-eecc---ccCCceEEEEEecCCC
Q 033738 8 YVSSPPAFSND---VKRLLVC-T-S-----NTVSIFSTSTGL-----QI-SSLE---GHTAPVTTVIVVPAST 61 (112)
Q Consensus 8 ~v~~~~~~~~~---~~~l~~~-~-~-----~~v~~~~~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~ 61 (112)
.... ++++|+ +..|+.+ . . +.|..++..... .+ ..+. ........++|.|++.
T Consensus 76 ~p~g-ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~ 147 (352)
T 2ism_A 76 GLLG-LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM 147 (352)
T ss_dssp SEEE-EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC
T ss_pred Ccee-EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC
Confidence 3455 889998 5555444 3 2 677777776431 11 1122 1112235789999985
No 313
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.74 E-value=4.9 Score=27.47 Aligned_cols=27 Identities=22% Similarity=0.511 Sum_probs=23.8
Q ss_pred EEEeeecCCcEEEEeCCCCceEEEEec
Q 033738 69 YCWTASLDETIKYWDFSTPELLKTIDV 95 (112)
Q Consensus 69 ~~~~~~~d~~i~~~~~~~~~~~~~~~~ 95 (112)
++++-+.|+.+|+|+++++.++.+...
T Consensus 233 fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 233 YLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 777999999999999999998877665
No 314
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.66 E-value=8.2 Score=26.16 Aligned_cols=92 Identities=9% Similarity=0.086 Sum_probs=54.2
Q ss_pred CcCCCeEEcCCCCEEEEEc-CCeEEEEeCCCCceeeecc-----ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLE-----GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKY 81 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 81 (112)
.|.+ +...++|+.|..|+ ++-+..+|.++++. ..+. .....|.++...+++. +.+ ++. +-+..
T Consensus 407 ~v~~-i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~-------lwi-gt~-~Gl~~ 475 (795)
T 4a2l_A 407 NIKA-VYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGN-------LWL-GTL-SALVR 475 (795)
T ss_dssp CEEE-EEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSC-------EEE-EES-SCEEE
T ss_pred cEEE-EEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCC-------EEE-Eec-CceeE
Confidence 4554 66677787344455 67789999887653 2222 1235678887777774 222 233 45788
Q ss_pred EeCCCCceEEEEec-------CCCEEEEEEcCCCcE
Q 033738 82 WDFSTPELLKTIDV-------KFPIFSMVRGKKGFA 110 (112)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~ 110 (112)
||..+++....... ...+.++...++|..
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 476 FNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp EETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred EeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 88876644322111 126777777777754
No 315
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=83.52 E-value=7.6 Score=25.73 Aligned_cols=70 Identities=7% Similarity=0.052 Sum_probs=42.7
Q ss_pred eEEcCCCCEEEEEc--CCeEEEEeCCCCceeeeccccCCce-EEEEEecCCCCccceeEEEEeee-cC-----CcEEEEe
Q 033738 13 PAFSNDVKRLLVCT--SNTVSIFSTSTGLQISSLEGHTAPV-TTVIVVPASTPATKILSYCWTAS-LD-----ETIKYWD 83 (112)
Q Consensus 13 ~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~-~d-----~~i~~~~ 83 (112)
.++.++++.++.|+ +..+.+||..+.+-...-.....+. ......+++. +++.++ .+ ..+.+||
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-------iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-------VFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-------EEEECCCCCSSSCCCCEEEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe-------EEEEeCcccCCcccccceEeC
Confidence 45678899999988 4789999987654222111111111 2344555774 455666 33 5688999
Q ss_pred CCCCce
Q 033738 84 FSTPEL 89 (112)
Q Consensus 84 ~~~~~~ 89 (112)
..+...
T Consensus 321 ~~t~~W 326 (656)
T 1k3i_A 321 PSSKTW 326 (656)
T ss_dssp TTTTEE
T ss_pred CCCCcc
Confidence 887654
No 316
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.35 E-value=5.4 Score=23.85 Aligned_cols=91 Identities=4% Similarity=-0.014 Sum_probs=47.1
Q ss_pred cCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccc----cCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 9 VSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEG----HTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 9 v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
+.. +.+.++++.++.+.++.++..+.+.++.-..+.. ....+..+.+.+++. +++ .+.++.+. +..
T Consensus 207 ~~~-~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-------~~~-~g~~g~i~-~S~ 276 (327)
T 2xbg_A 207 LHN-MGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-------VWL-AGGAGALL-CSQ 276 (327)
T ss_dssp EEE-EEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-------EEE-EESTTCEE-EES
T ss_pred cce-eEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-------EEE-EeCCCeEE-EeC
Confidence 444 6677888777666678777764332332222221 223477888887663 333 34466663 333
Q ss_pred CCCceEEEEec----CCCEEEEEEcCCCc
Q 033738 85 STPELLKTIDV----KFPIFSMVRGKKGF 109 (112)
Q Consensus 85 ~~~~~~~~~~~----~~~v~~~~~~~~~~ 109 (112)
..|+.-..+.. +..+..+.|.+++.
T Consensus 277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQ 305 (327)
T ss_dssp STTSSCEECGGGTTSSSCCCEEEEEETTE
T ss_pred CCCcccEEcCccCCCCCCeEEEEEECCCc
Confidence 33443333321 23556666654443
No 317
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=82.41 E-value=6.7 Score=24.30 Aligned_cols=79 Identities=11% Similarity=0.237 Sum_probs=48.9
Q ss_pred CeEEEEeCC--CCceeeeccc------cC-CceEEEEE--ecCCCCccceeEEEEeeecCCcEEEEeCC-------CCce
Q 033738 28 NTVSIFSTS--TGLQISSLEG------HT-APVTTVIV--VPASTPATKILSYCWTASLDETIKYWDFS-------TPEL 89 (112)
Q Consensus 28 ~~v~~~~~~--~~~~~~~~~~------~~-~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-------~~~~ 89 (112)
++|.+|++. ++. +..+.. .. ..+..+++ +|... + .+++....++.+..|++. +++.
T Consensus 99 n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g---~--~yafV~~k~G~~~q~~l~~~~~g~~~~~l 172 (355)
T 3amr_A 99 NTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTG---K--YYAMVTGKEGEFEQYELKADKNGYISGKK 172 (355)
T ss_dssp CEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTC---C--EEEEEECSSSEEEEEEEEECTTSCEEEEE
T ss_pred CeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCC---c--EEEEEECCCCeEEEEEEEeCCCCcccceE
Confidence 689999763 332 433311 11 34455666 56432 1 245567778999998872 2356
Q ss_pred EEEEecCCCEEEEEEcCCCcEeC
Q 033738 90 LKTIDVKFPIFSMVRGKKGFAVF 112 (112)
Q Consensus 90 ~~~~~~~~~v~~~~~~~~~~~~~ 112 (112)
++++.....+..+...+....||
T Consensus 173 VR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 173 VRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp EEEEECSSCEEEEEEETTTTEEE
T ss_pred EEEecCCCCcceEEEcCCCCeEE
Confidence 77787777888888887766554
No 318
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=81.12 E-value=10 Score=25.61 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=52.9
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeecc---ccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLE---GHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
.|.+ +...++|+..+...++-+..++.++++ ...+. .....|.++...+++. +. .++. +-+..+|.
T Consensus 408 ~v~~-i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~-------lw-igt~-~Gl~~~~~ 476 (781)
T 3v9f_A 408 SVLC-SLKDSEGNLWFGTYLGNISYYNTRLKK-FQIIELEKNELLDVRVFYEDKNKK-------IW-IGTH-AGVFVIDL 476 (781)
T ss_dssp BEEE-EEECTTSCEEEEETTEEEEEECSSSCE-EEECCSTTTCCCCEEEEEECTTSE-------EE-EEET-TEEEEEES
T ss_pred ceEE-EEECCCCCEEEEeccCCEEEEcCCCCc-EEEeccCCCCCCeEEEEEECCCCC-------EE-EEEC-CceEEEeC
Confidence 4454 556666765554335678888877664 33332 1345678887777662 22 2333 45888887
Q ss_pred CCCceEEEEecC------CCEEEEEEcCCCcE
Q 033738 85 STPELLKTIDVK------FPIFSMVRGKKGFA 110 (112)
Q Consensus 85 ~~~~~~~~~~~~------~~v~~~~~~~~~~~ 110 (112)
.+++........ ..+.++...++|..
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 508 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF 508 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCCE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCCE
Confidence 766543332221 26777777776654
No 319
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.09 E-value=3.3 Score=28.21 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=22.6
Q ss_pred cCCCCEEEEEc-CCeEEEEeCCCCceeeec
Q 033738 16 SNDVKRLLVCT-SNTVSIFSTSTGLQISSL 44 (112)
Q Consensus 16 ~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~ 44 (112)
..+..++++-+ |+++|+|++.+++.+...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 34567888888 999999999998765443
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=79.74 E-value=9.8 Score=24.47 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=52.8
Q ss_pred cCCCCEEEEEcCCeEEEEeCCCCceeeecccc----CCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCc---
Q 033738 16 SNDVKRLLVCTSNTVSIFSTSTGLQISSLEGH----TAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE--- 88 (112)
Q Consensus 16 ~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--- 88 (112)
+.+|..++.+.++.||..++......+.+... ...+..+..+|+|. +++.. .+..+.+..+..+.
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-------lLAl~-g~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-------LLCLF-NDNEIFVMEVPWGYSNV 100 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-------EEEEE-CSSEEEEEECCTTCSCC
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-------EEEEe-cCCeEEEEEecCccccC
Confidence 44566666666788888887644334443322 23567899999995 43333 55688888776321
Q ss_pred ---------eEEEEec-------CCCEEEEEEcCCCc
Q 033738 89 ---------LLKTIDV-------KFPIFSMVRGKKGF 109 (112)
Q Consensus 89 ---------~~~~~~~-------~~~v~~~~~~~~~~ 109 (112)
..+.+.. ..+|..+.|+|-+.
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~ 137 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY 137 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBG
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccC
Confidence 1123332 23799999999663
No 321
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=79.69 E-value=11 Score=24.87 Aligned_cols=79 Identities=11% Similarity=0.009 Sum_probs=50.6
Q ss_pred eEEcCCCCEEEEEc---------------------C----CeEEEEeCCCCceeeeccc--cC--------CceEEEEEe
Q 033738 13 PAFSNDVKRLLVCT---------------------S----NTVSIFSTSTGLQISSLEG--HT--------APVTTVIVV 57 (112)
Q Consensus 13 ~~~~~~~~~l~~~~---------------------~----~~v~~~~~~~~~~~~~~~~--~~--------~~v~~~~~~ 57 (112)
++++|+...++.+. | +.|.-+|.++++..-.+.. +. .++. ....
T Consensus 251 ~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~ 329 (582)
T 1flg_A 251 ASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYK 329 (582)
T ss_dssp CEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEE
T ss_pred ceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eeee
Confidence 67778777776543 1 5789999999987755532 21 1111 1221
Q ss_pred -cCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEecC
Q 033738 58 -PASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDVK 96 (112)
Q Consensus 58 -~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 96 (112)
.++. .. ..++.++.+|.++.+|.++|+.+......
T Consensus 330 ~~~G~---~~-~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 330 AKDGK---IV-KATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp CSSSC---EE-EEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred cCCCC---EE-EEEEEECCCceEEEEECCCCCEecccccc
Confidence 3442 11 14567889999999999999988776543
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=79.52 E-value=7.1 Score=22.73 Aligned_cols=62 Identities=8% Similarity=-0.049 Sum_probs=38.6
Q ss_pred eEEcCCCCEEEEEcCCeEEEEeCCCCcee------eec-cccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeC
Q 033738 13 PAFSNDVKRLLVCTSNTVSIFSTSTGLQI------SSL-EGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDF 84 (112)
Q Consensus 13 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~------~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 84 (112)
+.+.|+|.+.++ +|+.|+-++..+.... ..+ ...-..+..+.+.|++. +. +.. |+.++....
T Consensus 93 ~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-------Ly-av~-dg~lyr~~~ 161 (236)
T 1tl2_A 93 LFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-------LY-AVH-GQQFYKALP 161 (236)
T ss_dssp EEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-------EE-EEE-TTEEEEECC
T ss_pred EEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-------EE-EEe-CCcEEecCC
Confidence 788999988877 7799988875432111 111 11124578999999993 33 444 777665443
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=79.50 E-value=9.6 Score=24.23 Aligned_cols=52 Identities=8% Similarity=0.020 Sum_probs=32.2
Q ss_pred CceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEec---------CCCEEEEEEcCC
Q 033738 49 APVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTIDV---------KFPIFSMVRGKK 107 (112)
Q Consensus 49 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~ 107 (112)
.....++|.|+++ ++++-...+.|++++..++........ ......++|+|+
T Consensus 27 ~~P~~~a~~pdG~-------l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQ-------IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSC-------EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCc-------EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 3457899999995 444544345788887655544322211 125668999995
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=79.29 E-value=9.1 Score=23.83 Aligned_cols=67 Identities=9% Similarity=-0.025 Sum_probs=41.8
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
+..++.-..++..+ .|.+++||+.++.++..-+-....+..-+-..... -++..+..|.+.--.+.+
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~-------Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATA-------GIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGT-------EEEEEETTCEEEEEEECT
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCC-------cEEEEcCCCEEEEEEECc
Confidence 45566556666666 79999999999988765554455555444433322 344556667666555443
No 325
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=79.13 E-value=12 Score=25.26 Aligned_cols=92 Identities=10% Similarity=0.061 Sum_probs=49.7
Q ss_pred CcCCCeEEcCCCCEEEEEcCCeEEEEeCCCCceeeecccc-----CCceEEEEEecCCCCccceeEEEEeeecCCcEEEE
Q 033738 8 YVSSPPAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGH-----TAPVTTVIVVPASTPATKILSYCWTASLDETIKYW 82 (112)
Q Consensus 8 ~v~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 82 (112)
.|.+ +...++|+..+... +-+..+|..+++........ ...+.++...+++. +. .++.++-+..+
T Consensus 451 ~v~~-i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-------lW-igt~~~Gl~~~ 520 (781)
T 3v9f_A 451 DVRV-FYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-------FW-IGTFGGGVGIY 520 (781)
T ss_dssp CEEE-EEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-------EE-EEESSSCEEEE
T ss_pred eEEE-EEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-------EE-EEEcCCCEEEE
Confidence 3444 55566665444433 56888887765432211111 35678888777774 22 33333347778
Q ss_pred eCCCCceEEEEec-----CCCEEEEEEcCCCcE
Q 033738 83 DFSTPELLKTIDV-----KFPIFSMVRGKKGFA 110 (112)
Q Consensus 83 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~ 110 (112)
|..+++. ..+.. ...+.++...++|..
T Consensus 521 ~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 521 TPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp CTTCCEE-EEECTTTTCSCSCEEEEEECTTSCE
T ss_pred eCCCCeE-EEccCCCCCCCCeeEEEEECCCCCE
Confidence 8765543 23321 125677777666654
No 326
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=74.72 E-value=13 Score=23.13 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=53.4
Q ss_pred CCcCCCeEE--cCC-CCE-EEEEc-CCeEEEEeCC---C----CceeeeccccCCceEEEEEecCCCCccceeEEEEeee
Q 033738 7 SYVSSPPAF--SND-VKR-LLVCT-SNTVSIFSTS---T----GLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTAS 74 (112)
Q Consensus 7 ~~v~~~~~~--~~~-~~~-l~~~~-~~~v~~~~~~---~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 74 (112)
..+.. +++ +|. +.. ++... ++.+..|++. . .+.++.+.. .+.+..+...+... .++.+-
T Consensus 128 ~~pyG-lcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g-------~Lyv~e 198 (355)
T 3amr_A 128 NEVYG-FTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG-------RLYIAE 198 (355)
T ss_dssp SSCCC-EEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT-------EEEEEE
T ss_pred CCeeE-EEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC-------eEEEec
Confidence 34555 777 674 443 44444 7999888872 2 234455553 34677778877653 445666
Q ss_pred cCCcEEEEeCC-----CCceEEEEecC---CCEEEEEE--cCCCc
Q 033738 75 LDETIKYWDFS-----TPELLKTIDVK---FPIFSMVR--GKKGF 109 (112)
Q Consensus 75 ~d~~i~~~~~~-----~~~~~~~~~~~---~~v~~~~~--~~~~~ 109 (112)
.+.-|..++.+ ++..+..+... ..+..|++ .++++
T Consensus 199 Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 199 EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC
T ss_pred ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC
Confidence 66556666644 23444444333 26777776 44444
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.97 E-value=16 Score=22.53 Aligned_cols=53 Identities=9% Similarity=-0.019 Sum_probs=34.5
Q ss_pred CCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCceEEEEe-------cCCCEEEEEEcCC
Q 033738 48 TAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPELLKTID-------VKFPIFSMVRGKK 107 (112)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~ 107 (112)
-...+.+++.|++. ++++--..+.|++++...+....... .......++++|+
T Consensus 31 L~~P~~ia~~pdG~-------llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 31 LNSPWGLAPLPGGD-------LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CSSEEEEEECTTSC-------EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCceEEEEcCCCc-------EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 34457999999995 45455448899999866555422211 1226788999885
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=70.92 E-value=19 Score=23.48 Aligned_cols=67 Identities=9% Similarity=-0.025 Sum_probs=42.1
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
+.+++.-..++..+ .|.+++||+.++..+..-+.....+..-+-..... -++.....|.+.--.+.+
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~-------Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATA-------GIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTT-------EEEEEETTCEEEEEEECT
T ss_pred EEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCC-------cEEEEccCceEEEEEEcc
Confidence 55666666666666 79999999999987765554455555444443332 344556666666554443
No 329
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=69.30 E-value=23 Score=23.72 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=32.9
Q ss_pred eEEcCCCCEEEEEc-C------------CeEEEEeCCCCceeeeccc-cCCceEEEEEecCCC
Q 033738 13 PAFSNDVKRLLVCT-S------------NTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPAST 61 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~------------~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 61 (112)
++|+|.|++++.-. + ..+...+..+++..+.+.. ...+++.++|+|+++
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~ 543 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK 543 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCC
Confidence 67899998766553 2 2355556666664443433 456899999999985
No 330
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.54 E-value=29 Score=23.28 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=32.6
Q ss_pred eEEcCCCCEEEEEc-C------------CeEEEEeCCCCceeeeccc-cCCceEEEEEecCCC
Q 033738 13 PAFSNDVKRLLVCT-S------------NTVSIFSTSTGLQISSLEG-HTAPVTTVIVVPAST 61 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~------------~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 61 (112)
+.++++|.+.+... . +.+..++..+++....+.. ...+++.++|+||++
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~k 543 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK 543 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCC
Confidence 77888888776332 1 2566667766764444432 345689999999995
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=63.31 E-value=28 Score=22.72 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=55.8
Q ss_pred eEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC-CceEE
Q 033738 13 PAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST-PELLK 91 (112)
Q Consensus 13 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~ 91 (112)
.-.+|..+.++--....+.++|+++...++.+.-.+ .|....|-.+.. + -++| +..++-|++.. ..+.+
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~-----l-~lVT---~taVyHWsi~~~s~P~k 140 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-----V-ALVT---DNAVYHWSMEGESQPVK 140 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTE-----E-EEEC---SSEEEEEESSSSCCCEE
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCC-CceEEEecCCCe-----E-EEEc---CCeeEEecccCCCCchh
Confidence 446777776666567899999999887777665433 567788865541 1 2223 35799999864 34555
Q ss_pred EEecCC-----CEEEEEEcCCCcEe
Q 033738 92 TIDVKF-----PIFSMVRGKKGFAV 111 (112)
Q Consensus 92 ~~~~~~-----~v~~~~~~~~~~~~ 111 (112)
.+.-+. .+-.-..+++.+++
T Consensus 141 vFdR~~~L~~~QIInY~~d~~~kW~ 165 (494)
T 1bpo_A 141 MFDRHSSLAGCQIINYRTDAKQKWL 165 (494)
T ss_dssp EEECCGGGTTCEEEEEEECTTSSEE
T ss_pred heecchhcccceEEEEEECCCCCeE
Confidence 555432 34444555665543
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=62.83 E-value=23 Score=21.55 Aligned_cols=50 Identities=6% Similarity=0.082 Sum_probs=31.2
Q ss_pred CceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCCCc-eEEEEe----cCCCEEEEEEcCC
Q 033738 49 APVTTVIVVPASTPATKILSYCWTASLDETIKYWDFSTPE-LLKTID----VKFPIFSMVRGKK 107 (112)
Q Consensus 49 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~----~~~~v~~~~~~~~ 107 (112)
.....++|.|+++ ++ .+..++.|++++ .++. .+..+. .......++++|+
T Consensus 29 ~~P~~ia~~pdG~-------l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-------YL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp SCEEEEEEEETTE-------EE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCeEEEEcCCCe-------EE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCC
Confidence 3457899999983 33 345558999887 3454 111111 1236788999997
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=62.20 E-value=26 Score=21.91 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=56.9
Q ss_pred eEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC-CceEE
Q 033738 13 PAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST-PELLK 91 (112)
Q Consensus 13 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~ 91 (112)
.-.+|..+.++--....+.++|+++...++.+.-. ..|....|-.+.. + -+++ +..++-|++.. ..+.+
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~~-e~VvfWkWis~~~----L--~lVT---~taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT----V--ALVT---DNAVYHWSMEGESQPVK 141 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE----E--EEEE---SSEEEEEESSTTCCCEE
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceecC-CccEEEEecCCCe----E--EEEc---CCcEEEEcccCCCCCce
Confidence 44678777776666789999999998877766643 4678888865541 1 2333 35799998864 34555
Q ss_pred EEecCC-----CEEEEEEcCCCcEe
Q 033738 92 TIDVKF-----PIFSMVRGKKGFAV 111 (112)
Q Consensus 92 ~~~~~~-----~v~~~~~~~~~~~~ 111 (112)
.+.-+. .+-.-..+++.+++
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~ 166 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWL 166 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEE
T ss_pred eeecchhcccceEEEEEECCCCCEE
Confidence 555432 34444445555543
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=61.44 E-value=20 Score=24.20 Aligned_cols=53 Identities=8% Similarity=0.028 Sum_probs=32.3
Q ss_pred eEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC------Cce-------EEEEecCCCEEEEEEcCCCc
Q 033738 51 VTTVIVVPASTPATKILSYCWTASLDETIKYWDFST------PEL-------LKTIDVKFPIFSMVRGKKGF 109 (112)
Q Consensus 51 v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~------~~~-------~~~~~~~~~v~~~~~~~~~~ 109 (112)
...+..+|++. -+++++-.+.++.++|+++ ++. .............+|.++|.
T Consensus 325 PHGv~vsPDGk------yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 325 PHGCNTSSDGK------YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN 390 (638)
T ss_dssp CCCEEECTTSC------EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE
T ss_pred CcceeeCCCCC------EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc
Confidence 35678899996 2344566788999999863 111 22222233556677777773
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=48.41 E-value=92 Score=24.02 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=35.8
Q ss_pred eEEcCCCCEEEEEc-CCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCC
Q 033738 13 PAFSNDVKRLLVCT-SNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFS 85 (112)
Q Consensus 13 ~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 85 (112)
+..++.-..++..+ .|.+.++|+.++..+..-+.....|...+-..... -++.....|.+.-..+.
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~-------g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATA-------GIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCC-------ceEEEcCCceEEEEEEc
Confidence 44555555565556 79999999999876644333334444333322221 23344455555544443
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=47.52 E-value=95 Score=23.94 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=41.6
Q ss_pred eEEcCCCCEEEEEcCCeEEEEeCCCCceeeeccccCCceEEEEEecCCCCccceeEEEEeeecCCcEEEEeCCC
Q 033738 13 PAFSNDVKRLLVCTSNTVSIFSTSTGLQISSLEGHTAPVTTVIVVPASTPATKILSYCWTASLDETIKYWDFST 86 (112)
Q Consensus 13 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 86 (112)
.-.+|..+.++--....+.++|+.+...+..+.-. ..|....|-.... + -++| +..|+.|++..
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~----l--~lVT---~~aVyHW~~~~ 134 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT----V--ALVT---DNAVYHWSMEG 134 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhcccccC-CCceEEEecCCCe----e--EEEc---CCeEEEeccCC
Confidence 34567666666556788999999887666655533 3577888855441 1 2333 35799999863
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.74 E-value=57 Score=20.04 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=37.6
Q ss_pred EEEEEc-CCeEEEEeCCCCceeeecccc-CCceEEEEEe--cCCCCccceeEEEEeeecCCcEEEEeCCCCceEE
Q 033738 21 RLLVCT-SNTVSIFSTSTGLQISSLEGH-TAPVTTVIVV--PASTPATKILSYCWTASLDETIKYWDFSTPELLK 91 (112)
Q Consensus 21 ~l~~~~-~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 91 (112)
.++.++ ||.|.-+|.++|+..-.+... ..+.....-. +.+. .+ +++....||.++.++..+|....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~----~~-~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETY----ET-LIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSS----EE-EEECCSTTTEEEEEETTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCC----cE-EEEEECCCCEEEEEECCCCcEEe
Confidence 455555 999999999999877666543 1222211100 0111 11 22223578999999988775443
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=39.28 E-value=1.1e+02 Score=22.43 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=39.6
Q ss_pred EEEEEcCCeEEEEeCCCCce--eeeccccCCceEEEEEecCCCCccceeEEEEeeec-CCcEEEEeCCCCceEEEE
Q 033738 21 RLLVCTSNTVSIFSTSTGLQ--ISSLEGHTAPVTTVIVVPASTPATKILSYCWTASL-DETIKYWDFSTPELLKTI 93 (112)
Q Consensus 21 ~l~~~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~~~~~ 93 (112)
.++.+.++.+..++++.++. .... .-...|.|+++.|...+...- .+++.+.+ |++++++++.+-+.+...
T Consensus 525 ~vvva~g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s-~~~aVg~~~d~tv~I~sL~~l~~~~~~ 598 (1158)
T 3ei3_A 525 QVVVAVGRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLS-PLCAIGLWTDISARILKLPSFELLHKE 598 (1158)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCC-SEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEEECCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccc-cEEEEEECCCCEEEEEECCCCCeEEEE
Confidence 33333456666666654421 1111 234578999987642100111 15567776 999999999875555443
No 339
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=36.84 E-value=62 Score=18.75 Aligned_cols=63 Identities=5% Similarity=0.013 Sum_probs=32.5
Q ss_pred CCCEEEEEc-C----CeEEEEeCCCCcee--eeccccCCceEEEEEecCCCCccceeEEEEeeecC------CcEEEEeC
Q 033738 18 DVKRLLVCT-S----NTVSIFSTSTGLQI--SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD------ETIKYWDF 84 (112)
Q Consensus 18 ~~~~l~~~~-~----~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d------~~i~~~~~ 84 (112)
++..++.|+ + ..+.+||..+.+-. ..+.........+. -++. +++.++.+ ..+..||.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-------iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGK-------IYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTE-------EEEECCBBTTBSCCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCE-------EEEECCCCCCCcEeeeEEEEeC
Confidence 555666665 3 67888898765322 22221111112222 2442 44455543 45888888
Q ss_pred CCCce
Q 033738 85 STPEL 89 (112)
Q Consensus 85 ~~~~~ 89 (112)
.+...
T Consensus 126 ~~~~W 130 (306)
T 3ii7_A 126 RTESW 130 (306)
T ss_dssp TTTEE
T ss_pred CCCce
Confidence 77654
No 340
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=26.44 E-value=98 Score=17.81 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCCEEEEEc-C-----CeEEEEeCCCCcee--eeccccCCceEEEEEecCCCCccceeEEEEeeecC-----CcEEEEeC
Q 033738 18 DVKRLLVCT-S-----NTVSIFSTSTGLQI--SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-----ETIKYWDF 84 (112)
Q Consensus 18 ~~~~l~~~~-~-----~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~~~~~ 84 (112)
+++.++.|+ + ..+.+||+.+.+-. ............+. -++. +++.++.+ ..+..||.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-------i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGR-------LYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE-------EEEECCBCSSSBEEEEEEEET
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCE-------EEEEcCcCCCcccccEEEEcC
Confidence 456666665 3 46888998765422 22221111112222 2442 44455544 35778888
Q ss_pred CCCce
Q 033738 85 STPEL 89 (112)
Q Consensus 85 ~~~~~ 89 (112)
++.+.
T Consensus 277 ~~~~W 281 (301)
T 2vpj_A 277 IIDSW 281 (301)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 77654
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=26.36 E-value=1.1e+02 Score=18.50 Aligned_cols=43 Identities=14% Similarity=0.120 Sum_probs=24.3
Q ss_pred CCEEEEEc-CCeEEEEeCCCCceeee---ccccCCceEEEEEecCCC
Q 033738 19 VKRLLVCT-SNTVSIFSTSTGLQISS---LEGHTAPVTTVIVVPAST 61 (112)
Q Consensus 19 ~~~l~~~~-~~~v~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~ 61 (112)
|+++++.. .+.|...+++.++.... +......+..+++.|++.
T Consensus 289 g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 289 QKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp TEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 44544444 57777777664432211 222234677888888884
No 342
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=21.32 E-value=88 Score=15.98 Aligned_cols=19 Identities=21% Similarity=0.177 Sum_probs=15.1
Q ss_pred CeEEEEeCCCCceeeeccc
Q 033738 28 NTVSIFSTSTGLQISSLEG 46 (112)
Q Consensus 28 ~~v~~~~~~~~~~~~~~~~ 46 (112)
-.|++.|..+++.++.++.
T Consensus 69 ~vVkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 69 YYVKVIEDSTNEVIREIPP 87 (117)
T ss_dssp EEEEEEETTTTEEEEEECH
T ss_pred EEEEEEECCCCcEEEeCCh
Confidence 3578899999988888764
No 343
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=20.86 E-value=1.4e+02 Score=17.44 Aligned_cols=23 Identities=4% Similarity=0.002 Sum_probs=14.3
Q ss_pred CCCCEEEEEc-C------CeEEEEeCCCCc
Q 033738 17 NDVKRLLVCT-S------NTVSIFSTSTGL 39 (112)
Q Consensus 17 ~~~~~l~~~~-~------~~v~~~~~~~~~ 39 (112)
.+++.++.|+ + ..+..||..+.+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 3555556664 1 468888887653
No 344
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=20.77 E-value=1.3e+02 Score=17.29 Aligned_cols=63 Identities=10% Similarity=0.110 Sum_probs=32.1
Q ss_pred CCCEEEEEc-C-----CeEEEEeCCCCcee--eeccccCCceEEEEEecCCCCccceeEEEEeeecC-----CcEEEEeC
Q 033738 18 DVKRLLVCT-S-----NTVSIFSTSTGLQI--SSLEGHTAPVTTVIVVPASTPATKILSYCWTASLD-----ETIKYWDF 84 (112)
Q Consensus 18 ~~~~l~~~~-~-----~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~~~~~ 84 (112)
+++.++.|+ + ..+.+||+.+.+-. ............ .. .++. +++.++.+ ..+.+||.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~-~~-~~~~-------i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV-CA-VNGL-------LYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EE-ETTE-------EEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE-EE-ECCE-------EEEECCcCCCcccccEEEEcC
Confidence 556666665 3 46888998765322 112111111112 22 2442 44455544 34888898
Q ss_pred CCCce
Q 033738 85 STPEL 89 (112)
Q Consensus 85 ~~~~~ 89 (112)
.+.+.
T Consensus 275 ~~~~W 279 (302)
T 2xn4_A 275 TTDKW 279 (302)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87654
No 345
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=20.32 E-value=19 Score=23.27 Aligned_cols=17 Identities=29% Similarity=0.638 Sum_probs=11.2
Q ss_pred eeecCCcEEEEeCCCCc
Q 033738 72 TASLDETIKYWDFSTPE 88 (112)
Q Consensus 72 ~~~~d~~i~~~~~~~~~ 88 (112)
.+..+|.+++||+++..
T Consensus 162 ~~~~~GVVrvWDVkd~s 178 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAE 178 (577)
T ss_dssp ----CCEECSEECSCGG
T ss_pred CCCCCCeEEEEecCCHH
Confidence 45678999999998754
No 346
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=20.12 E-value=1.2e+02 Score=16.38 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=21.7
Q ss_pred CEEEEEcCCeEEEEeCCCCceeeeccccC
Q 033738 20 KRLLVCTSNTVSIFSTSTGLQISSLEGHT 48 (112)
Q Consensus 20 ~~l~~~~~~~v~~~~~~~~~~~~~~~~~~ 48 (112)
+.+....++.|++.|..+...+..++-..
T Consensus 56 ~~~L~v~~~tlrLvD~~tk~~L~~~pI~~ 84 (148)
T 3d8d_A 56 DLLLQLEDETLKLVEPQSQALLHAQPIIS 84 (148)
T ss_dssp EEEEEEETTEEEEECTTTCCEEEEEEGGG
T ss_pred eEEEEEcCCeEEEecCCCCceEEEeeEEE
Confidence 34556678999999999887777776543
Done!