Your job contains 1 sequence.
>033740
MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD
NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRVSFACFY
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033740
(112 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061883 - symbol:AT2G40510 species:3702 "Arabi... 335 2.3e-30 1
TAIR|locus:2061928 - symbol:AT2G40590 species:3702 "Arabi... 335 2.3e-30 1
TAIR|locus:2078491 - symbol:AT3G56340 species:3702 "Arabi... 329 1.0e-29 1
WB|WBGene00004495 - symbol:rps-26 species:6239 "Caenorhab... 283 7.6e-25 1
ZFIN|ZDB-GENE-030131-8606 - symbol:rps26 "ribosomal prote... 268 2.9e-23 1
ZFIN|ZDB-GENE-040426-1706 - symbol:rps26l "ribosomal prot... 268 2.9e-23 1
UNIPROTKB|J9P4R8 - symbol:RPS26 "Uncharacterized protein"... 266 4.8e-23 1
UNIPROTKB|F1MB60 - symbol:RPS26 "40S ribosomal protein S2... 265 6.1e-23 1
UNIPROTKB|Q56JV1 - symbol:RPS26 "40S ribosomal protein S2... 265 6.1e-23 1
UNIPROTKB|P62854 - symbol:RPS26 "40S ribosomal protein S2... 265 6.1e-23 1
UNIPROTKB|F1SPH5 - symbol:LOC100625477 "Uncharacterized p... 265 6.1e-23 1
UNIPROTKB|P49171 - symbol:RPS26 "40S ribosomal protein S2... 265 6.1e-23 1
RGD|2319323 - symbol:LOC100361854 "ribosomal protein S26-... 265 6.1e-23 1
RGD|2319518 - symbol:LOC100361756 "ribosomal protein S26-... 265 6.1e-23 1
RGD|621044 - symbol:Rps26 "ribosomal protein S26" species... 265 6.1e-23 1
FB|FBgn0261597 - symbol:RpS26 "Ribosomal protein S26" spe... 263 1.0e-22 1
UNIPROTKB|G3N0E2 - symbol:G3N0E2 "Uncharacterized protein... 262 1.3e-22 1
UNIPROTKB|F8VZW7 - symbol:LOC100996747 "Protein LOC100996... 261 1.6e-22 1
RGD|1562415 - symbol:RGD1562415 "similar to 40S ribosomal... 261 1.6e-22 1
RGD|1582959 - symbol:LOC688948 "similar to ribosomal prot... 256 5.5e-22 1
UNIPROTKB|Q5JNZ5 - symbol:RPS26P11 "Putative 40S ribosoma... 251 1.9e-21 1
ASPGD|ASPL0000029491 - symbol:AN5715 species:162425 "Emer... 248 3.9e-21 1
POMBASE|SPAC1805.11c - symbol:rps2602 "40S ribosomal prot... 245 8.0e-21 1
RGD|1586381 - symbol:LOC689919 "similar to 40S ribosomal ... 241 2.1e-20 1
CGD|CAL0004688 - symbol:RPS26A species:5476 "Candida albi... 239 3.5e-20 1
GENEDB_PFALCIPARUM|PFB0830w - symbol:PFB0830w "Ribosomal ... 239 3.5e-20 1
UNIPROTKB|O96258 - symbol:PFB0830w "40S ribosomal protein... 239 3.5e-20 1
POMBASE|SPAC806.03c - symbol:rps2601 "40S ribosomal prote... 235 9.2e-20 1
SGD|S000003157 - symbol:RPS26A "Protein component of the ... 228 5.1e-19 1
SGD|S000000933 - symbol:RPS26B "Protein component of the ... 228 5.1e-19 1
RGD|1559808 - symbol:RGD1559808 "similar to 40S ribosomal... 226 8.3e-19 1
UNIPROTKB|F1RFS4 - symbol:F1RFS4 "Uncharacterized protein... 224 1.4e-18 1
DICTYBASE|DDB_G0281677 - symbol:rps26 "40S ribosomal prot... 223 1.7e-18 1
UNIPROTKB|J9NX11 - symbol:J9NX11 "Uncharacterized protein... 211 3.2e-17 1
UNIPROTKB|I3L5L2 - symbol:RPS26 "40S ribosomal protein S2... 208 6.7e-17 1
UNIPROTKB|G3N0G0 - symbol:G3N0G0 "Uncharacterized protein... 205 1.4e-16 1
RGD|1565117 - symbol:RGD1565117 "similar to 40S ribosomal... 205 1.4e-16 1
UNIPROTKB|I3L8W3 - symbol:I3L8W3 "Uncharacterized protein... 186 1.4e-14 1
UNIPROTKB|D4ADZ4 - symbol:D4ADZ4 "Uncharacterized protein... 186 1.4e-14 1
UNIPROTKB|F1M2V6 - symbol:F1M2V6 "Uncharacterized protein... 170 7.1e-13 1
UNIPROTKB|F1M5Y5 - symbol:F1M5Y5 "Uncharacterized protein... 149 1.2e-10 1
>TAIR|locus:2061883 [details] [associations]
symbol:AT2G40510 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0009506
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC002336 GO:GO:0022627 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 ProtClustDB:PLN00186
PANTHER:PTHR12538 EMBL:AY099673 EMBL:BT020291 EMBL:BT026422
EMBL:AY086823 IPI:IPI00522785 PIR:D84830 RefSeq:NP_181583.1
UniGene:At.23445 ProteinModelPortal:Q8LPJ7 SMR:Q8LPJ7 STRING:Q8LPJ7
PaxDb:Q8LPJ7 PRIDE:Q8LPJ7 EnsemblPlants:AT2G40510.1 GeneID:818646
KEGG:ath:AT2G40510 TAIR:At2g40510 InParanoid:Q8LPJ7 OMA:SCAIHST
PhylomeDB:Q8LPJ7 Genevestigator:Q8LPJ7 GermOnline:AT2G40510
Uniprot:Q8LPJ7
Length = 133
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/105 (60%), Positives = 70/105 (66%)
Query: 1 MTFXXXXXXXXXXXXXXVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTF VN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXXEPPKRFMRRR 105
Y LPKLYAK QYCVSCAIHSH PP RF RR+
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRK 105
>TAIR|locus:2061928 [details] [associations]
symbol:AT2G40590 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC002336
GO:GO:0022627 EMBL:AY127000 EMBL:BT001026 EMBL:Z18167
IPI:IPI00525445 PIR:D84831 RefSeq:NP_181591.1 UniGene:At.48573
ProteinModelPortal:P49206 SMR:P49206 IntAct:P49206 STRING:P49206
PaxDb:P49206 PRIDE:P49206 EnsemblPlants:AT2G40590.1 GeneID:818654
KEGG:ath:AT2G40590 TAIR:At2g40590 eggNOG:COG4830
HOGENOM:HOG000108824 InParanoid:P49206 KO:K02976 OMA:IRANPNS
PhylomeDB:P49206 ProtClustDB:PLN00186 Genevestigator:P49206
GermOnline:AT2G40590 PANTHER:PTHR12538 Uniprot:P49206
Length = 131
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/105 (60%), Positives = 70/105 (66%)
Query: 1 MTFXXXXXXXXXXXXXXVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTF VN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXXEPPKRFMRRR 105
Y LPKLYAK QYCVSCAIHSH PP RF RR+
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRK 105
>TAIR|locus:2078491 [details] [associations]
symbol:AT3G56340 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AL163763 GO:GO:0022627 eggNOG:COG4830 HOGENOM:HOG000108824
KO:K02976 ProtClustDB:PLN00186 PANTHER:PTHR12538 EMBL:AY039886
EMBL:AY133664 IPI:IPI00546882 PIR:T47751 RefSeq:NP_191193.1
UniGene:At.5076 ProteinModelPortal:Q9LYK9 SMR:Q9LYK9 STRING:Q9LYK9
PaxDb:Q9LYK9 PRIDE:Q9LYK9 EnsemblPlants:AT3G56340.1 GeneID:824801
KEGG:ath:AT3G56340 TAIR:At3g56340 InParanoid:Q9LYK9 OMA:SKHGRGH
PhylomeDB:Q9LYK9 Genevestigator:Q9LYK9 GermOnline:AT3G56340
Uniprot:Q9LYK9
Length = 130
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 63/105 (60%), Positives = 69/105 (65%)
Query: 1 MTFXXXXXXXXXXXXXXVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTF V IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXXEPPKRFMRRR 105
Y LPKLYAK QYCVSCAIHSH PP RF RR+
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRK 105
>WB|WBGene00004495 [details] [associations]
symbol:rps-26 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 EMBL:Z92834 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH
GeneTree:ENSGT00390000002517 PIR:T21988 RefSeq:NP_493571.1
ProteinModelPortal:O45499 SMR:O45499 STRING:O45499 PaxDb:O45499
PRIDE:O45499 EnsemblMetazoa:F39B2.6.1 EnsemblMetazoa:F39B2.6.2
GeneID:173342 KEGG:cel:CELE_F39B2.6 UCSC:F39B2.6.1 CTD:173342
WormBase:F39B2.6 InParanoid:O45499 NextBio:879249 Uniprot:O45499
Length = 117
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 54/104 (51%), Positives = 63/104 (60%)
Query: 1 MTFXXXXXXXXXXXXXXVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTF V FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ DA Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXXEPPKRFMRR 104
Y LPKLY K+ YC++CAIHS PP RF +R
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRFGQR 104
>ZFIN|ZDB-GENE-030131-8606 [details] [associations]
symbol:rps26 "ribosomal protein S26" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
ZFIN:ZDB-GENE-030131-8606 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 GeneTree:ENSGT00390000002517 EMBL:CR352210
IPI:IPI00996558 Ensembl:ENSDART00000128833 ArrayExpress:F1QP94
Bgee:F1QP94 Uniprot:F1QP94
Length = 119
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 47/81 (58%), Positives = 58/81 (71%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D+YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDSYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>ZFIN|ZDB-GENE-040426-1706 [details] [associations]
symbol:rps26l "ribosomal protein S26, like"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
ZFIN:ZDB-GENE-040426-1706 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 OrthoDB:EOG4JWVG2 EMBL:BC059532 IPI:IPI00481430
RefSeq:NP_957036.1 UniGene:Dr.76736 STRING:Q6PBZ2 PRIDE:Q6PBZ2
GeneID:393715 KEGG:dre:393715 CTD:393715 InParanoid:Q6PBZ2
NextBio:20814717 ArrayExpress:Q6PBZ2 Bgee:Q6PBZ2 Uniprot:Q6PBZ2
Length = 115
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 47/81 (58%), Positives = 58/81 (71%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D+YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDSYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>UNIPROTKB|J9P4R8 [details] [associations]
symbol:RPS26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12538 OMA:SKHGRGH
GeneTree:ENSGT00390000002517 EMBL:AAEX03006917
Ensembl:ENSCAFT00000049430 Uniprot:J9P4R8
Length = 121
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 50/87 (57%), Positives = 60/87 (68%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRFMRRRVS 107
S PP RF R VS
Sbjct: 81 SKVVRNRSREARKDRTPPPRF-RPAVS 106
>UNIPROTKB|F1MB60 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9913 "Bos
taurus" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SKHGRGH GeneTree:ENSGT00390000002517
IPI:IPI00694688 EMBL:DAAA02013535 Ensembl:ENSBTAT00000054840
Uniprot:F1MB60
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>UNIPROTKB|Q56JV1 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 EMBL:AY911381 EMBL:BC113281 IPI:IPI00694688
RefSeq:NP_001015561.1 UniGene:Bt.2934 ProteinModelPortal:Q56JV1
SMR:Q56JV1 STRING:Q56JV1 PRIDE:Q56JV1 GeneID:509426 KEGG:bta:509426
CTD:6231 InParanoid:Q56JV1 OrthoDB:EOG4JWVG2 NextBio:20868963
Uniprot:Q56JV1
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>UNIPROTKB|P62854 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0015935 "small
ribosomal subunit" evidence=IDA] [GO:0033119 "negative regulation
of RNA splicing" evidence=IDA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003729 GO:GO:0003735 GO:GO:0033119
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 Orphanet:124 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH
HOVERGEN:HBG079147 CTD:6231 OrthoDB:EOG4JWVG2 EMBL:X69654
EMBL:X77770 EMBL:X79236 EMBL:U41448 EMBL:BC002604 EMBL:BC015832
EMBL:BC070220 EMBL:BC105276 EMBL:BC105798 IPI:IPI00655650
PIR:S55545 PIR:T50824 RefSeq:NP_001020.2 UniGene:Hs.447562
UniGene:Hs.567235 UniGene:Hs.711461 ProteinModelPortal:P62854
SMR:P62854 IntAct:P62854 STRING:P62854 PhosphoSite:P62854
DMDM:51338650 PaxDb:P62854 PRIDE:P62854 DNASU:6231
Ensembl:ENST00000356464 Ensembl:ENST00000552361 GeneID:6231
KEGG:hsa:6231 UCSC:uc001sjf.3 GeneCards:GC12P056438
H-InvDB:HIX0161895 HGNC:HGNC:10414 HPA:HPA043961 MIM:603701
MIM:613309 neXtProt:NX_P62854 PharmGKB:PA34818 InParanoid:P62854
PhylomeDB:P62854 GenomeRNAi:6231 NextBio:24189 ArrayExpress:P62854
Bgee:P62854 CleanEx:HS_RPS26 Genevestigator:P62854
GermOnline:ENSG00000196656 GermOnline:ENSG00000197728
Uniprot:P62854
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>UNIPROTKB|F1SPH5 [details] [associations]
symbol:LOC100625477 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SKHGRGH GeneTree:ENSGT00390000002517
EMBL:CU457395 Ensembl:ENSSSCT00000000399 Uniprot:F1SPH5
Length = 116
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 22 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 81
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 82 SKVVRNRSREARKDRTPPPRF 102
>UNIPROTKB|P49171 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 CTD:6231 OrthoDB:EOG4JWVG2 EMBL:F14491
EMBL:DQ629173 RefSeq:NP_001090950.1 UniGene:Ssc.945
ProteinModelPortal:P49171 SMR:P49171 STRING:P49171 PRIDE:P49171
GeneID:100037997 KEGG:ssc:100037997 Uniprot:P49171
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>RGD|2319323 [details] [associations]
symbol:LOC100361854 "ribosomal protein S26-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 RGD:2319323 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538 OMA:KAICVTR
GeneTree:ENSGT00390000002517 OrthoDB:EOG4JWVG2 IPI:IPI00213366
RefSeq:XP_002730256.1 RefSeq:XP_003754880.1 PRIDE:D3Z8D7
Ensembl:ENSRNOT00000051134 GeneID:100361854 KEGG:rno:100361854
Uniprot:D3Z8D7
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>RGD|2319518 [details] [associations]
symbol:LOC100361756 "ribosomal protein S26-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 RGD:2319518 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 OMA:IRANPNS PANTHER:PTHR12538
IPI:IPI00777091 Ensembl:ENSRNOT00000057635 Uniprot:F1M6H7
Length = 114
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 20 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 79
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 80 SKVVRNRSREARKDRTPPPRF 100
>RGD|621044 [details] [associations]
symbol:Rps26 "ribosomal protein S26" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO;IDA] [GO:0033119
"negative regulation of RNA splicing" evidence=ISO]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:621044
GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 HOVERGEN:HBG079147 CTD:6231
OrthoDB:EOG4JWVG2 EMBL:X02414 EMBL:BC061561 IPI:IPI00551657
PIR:A02753 RefSeq:NP_037356.1 RefSeq:XP_002728047.1
RefSeq:XP_003752685.1 UniGene:Rn.135639 UniGene:Rn.203156
ProteinModelPortal:P62856 SMR:P62856 STRING:P62856 PRIDE:P62856
Ensembl:ENSRNOT00000007304 GeneID:100360508 GeneID:27139
KEGG:rno:100360508 KEGG:rno:27139 UCSC:RGD:621044 InParanoid:P62856
NextBio:608057 Genevestigator:P62856 GermOnline:ENSRNOG00000005517
Uniprot:P62856
Length = 115
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>FB|FBgn0261597 [details] [associations]
symbol:RpS26 "Ribosomal protein S26" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;NAS] [GO:0005840
"ribosome" evidence=NAS] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG4830 KO:K02976 PANTHER:PTHR12538
OMA:SKHGRGH GeneTree:ENSGT00390000002517 CTD:6231 EMBL:X13625
EMBL:X14247 EMBL:AY069761 EMBL:BT072894 PIR:S03724
RefSeq:NP_523595.1 RefSeq:NP_724109.1 RefSeq:NP_724110.1
UniGene:Dm.6957 ProteinModelPortal:P13008 SMR:P13008 DIP:DIP-17487N
IntAct:P13008 MINT:MINT-297533 STRING:P13008 PaxDb:P13008
PRIDE:P13008 EnsemblMetazoa:FBtr0081089 EnsemblMetazoa:FBtr0081090
EnsemblMetazoa:FBtr0081091 EnsemblMetazoa:FBtr0331455 GeneID:35098
KEGG:dme:Dmel_CG10305 FlyBase:FBgn0261597 InParanoid:P13008
OrthoDB:EOG4G1K01 PhylomeDB:P13008 ChiTaRS:RPS26 GenomeRNAi:35098
NextBio:791848 Bgee:P13008 GermOnline:CG10305 Uniprot:P13008
Length = 114
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 47/80 (58%), Positives = 58/80 (72%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A I+D+YVLPKLYAK+ YCVSCAIH
Sbjct: 21 VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKR 100
S PP R
Sbjct: 81 SKVVRNRSREARRIRTPPLR 100
>UNIPROTKB|G3N0E2 [details] [associations]
symbol:G3N0E2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SCAIHST GeneTree:ENSGT00390000002517
EMBL:DAAA02073248 Ensembl:ENSBTAT00000064544 NextBio:20927036
Uniprot:G3N0E2
Length = 115
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 45/81 (55%), Positives = 56/81 (69%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F+ RNI+E AA+RD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVTRNIIEAAAIRDISEASVFDTYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>UNIPROTKB|F8VZW7 [details] [associations]
symbol:LOC100996747 "Protein LOC100996747" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC225613 PANTHER:PTHR12538 IPI:IPI01022997
RefSeq:XP_003846586.1 ProteinModelPortal:F8VZW7 SMR:F8VZW7
Ensembl:ENST00000547899 GeneID:100996747 KEGG:hsa:100996747
ArrayExpress:F8VZW7 Uniprot:F8VZW7
Length = 115
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ + ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREARKDRTPPPRF 101
>RGD|1562415 [details] [associations]
symbol:RGD1562415 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1562415
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
IPI:IPI00362101 Ensembl:ENSRNOT00000042292 Uniprot:F1M3V7
Length = 115
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 47/81 (58%), Positives = 57/81 (70%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCTRCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNPSCEARKDGTPPPRF 101
>RGD|1582959 [details] [associations]
symbol:LOC688948 "similar to ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1582959
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
OrthoDB:EOG4JWVG2 IPI:IPI00394551 RefSeq:XP_001066146.1
RefSeq:XP_002726626.1 Ensembl:ENSRNOT00000041748 GeneID:688948
KEGG:rno:688948 UCSC:RGD:1582959 NextBio:737590 Uniprot:D4AAJ9
Length = 115
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
I C+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 ICCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDTYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSCEARKDRTPPPRF 101
>UNIPROTKB|Q5JNZ5 [details] [associations]
symbol:RPS26P11 "Putative 40S ribosomal protein S26-like 1"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG4830 PANTHER:PTHR12538 EMBL:AL929401
IPI:IPI00187140 UniGene:Hs.449523 ProteinModelPortal:Q5JNZ5
SMR:Q5JNZ5 STRING:Q5JNZ5 DMDM:74741611 PaxDb:Q5JNZ5 PRIDE:Q5JNZ5
GeneCards:GC0XP071181 HGNC:HGNC:31817 neXtProt:NX_Q5JNZ5
HOVERGEN:HBG079147 InParanoid:Q5JNZ5 PhylomeDB:Q5JNZ5
Genevestigator:Q5JNZ5 Uniprot:Q5JNZ5
Length = 115
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 45/81 (55%), Positives = 55/81 (67%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C P DKAIK+F++RNIVE AAVRD+ + ++D YVLPKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVRNRSREACKDRTPPPRF 101
>ASPGD|ASPL0000029491 [details] [associations]
symbol:AN5715 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 EMBL:AACD01000098
EMBL:BN001305 GO:GO:0003735 eggNOG:COG4830 HOGENOM:HOG000108824
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3
RefSeq:XP_663319.1 STRING:Q5B165 EnsemblFungi:CADANIAT00003347
GeneID:2872004 KEGG:ani:AN5715.2 Uniprot:Q5B165
Length = 119
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 42/80 (52%), Positives = 54/80 (67%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+RCSNC +C PKDKAIKRF +RN+VE AA+RD+ DA ++ +Y +PK+Y K+QYCVSCAIH
Sbjct: 21 VRCSNCARCVPKDKAIKRFTIRNMVESAAIRDISDASVFADYAVPKMYLKLQYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKR 100
PP R
Sbjct: 81 GKIVRVRSREGRRNRAPPPR 100
>POMBASE|SPAC1805.11c [details] [associations]
symbol:rps2602 "40S ribosomal protein S26 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 PomBase:SPAC1805.11c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3 EMBL:AB029514
PIR:T37896 PIR:T43515 RefSeq:NP_593922.1 STRING:Q9UTG4 PRIDE:Q9UTG4
EnsemblFungi:SPAC1805.11c.1 GeneID:2542538 KEGG:spo:SPAC1805.11c
NextBio:20803590 Uniprot:Q9UTG4
Length = 119
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 44/88 (50%), Positives = 55/88 (62%)
Query: 18 VNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSC 77
V F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y Y +PKLY K+QYCVSC
Sbjct: 18 VKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSC 77
Query: 78 AIHSHXXXXXXXXXXXXXEPPKRFMRRR 105
AIHS PP R R
Sbjct: 78 AIHSRVVRVRSREGRRIRTPPPRVRYNR 105
>RGD|1586381 [details] [associations]
symbol:LOC689919 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1586381
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
IPI:IPI00565233 Ensembl:ENSRNOT00000061643 Uniprot:F1LYT3
Length = 115
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 44/81 (54%), Positives = 54/81 (66%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PKDKAIK F++RNI+E AAVR + +A ++D YV PKLY K+ YCVSCAIH
Sbjct: 21 IRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 81 SKVVGNRSCEARKDQTPPPRF 101
>CGD|CAL0004688 [details] [associations]
symbol:RPS26A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
CGD:CAL0004688 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000008 EMBL:AACQ01000007 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 RefSeq:XP_722381.1
RefSeq:XP_722520.1 STRING:Q5ALV6 GeneID:3635787 GeneID:3635985
KEGG:cal:CaO19.1470 KEGG:cal:CaO19.9045 Uniprot:Q5ALV6
Length = 119
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/90 (52%), Positives = 57/90 (63%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+RC NC +C PKDKAIKR +RN+VE AAVRD+ +A +Y Y LPKLY K+ YCVSCAIH
Sbjct: 21 VRCLNCARCVPKDKAIKRVTIRNMVEAAAVRDLSEASVYAEYALPKLYNKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPP--KRFMR-RRVS 107
+ PP KRF R+VS
Sbjct: 81 ARIVRVRSRTDRKIRTPPQRKRFTSDRKVS 110
>GENEDB_PFALCIPARUM|PFB0830w [details] [associations]
symbol:PFB0830w "Ribosomal protein S26e,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412
GO:GO:0003735 EMBL:AE001362 GO:GO:0022627 HOGENOM:HOG000108824
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH ProtClustDB:PTZ00172
PIR:F71604 RefSeq:XP_001349683.1 ProteinModelPortal:O96258
PRIDE:O96258 EnsemblProtists:PFB0830w:mRNA GeneID:812765
KEGG:pfa:PFB0830w EuPathDB:PlasmoDB:PF3D7_0217800 Uniprot:O96258
Length = 107
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 18 VNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSC 77
VN +RCSNCG+C PKDKAIKRF +RNIV+ +A RD+++A +Y + LPKLY K YCVSC
Sbjct: 18 VNPLRCSNCGRCVPKDKAIKRFNIRNIVDTSAQRDIKEASVYSTFQLPKLYIKQCYCVSC 77
Query: 78 AIHS 81
AIHS
Sbjct: 78 AIHS 81
>UNIPROTKB|O96258 [details] [associations]
symbol:PFB0830w "40S ribosomal protein S26e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0003735
EMBL:AE001362 GO:GO:0022627 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH ProtClustDB:PTZ00172 PIR:F71604
RefSeq:XP_001349683.1 ProteinModelPortal:O96258 PRIDE:O96258
EnsemblProtists:PFB0830w:mRNA GeneID:812765 KEGG:pfa:PFB0830w
EuPathDB:PlasmoDB:PF3D7_0217800 Uniprot:O96258
Length = 107
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 18 VNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSC 77
VN +RCSNCG+C PKDKAIKRF +RNIV+ +A RD+++A +Y + LPKLY K YCVSC
Sbjct: 18 VNPLRCSNCGRCVPKDKAIKRFNIRNIVDTSAQRDIKEASVYSTFQLPKLYIKQCYCVSC 77
Query: 78 AIHS 81
AIHS
Sbjct: 78 AIHS 81
>POMBASE|SPAC806.03c [details] [associations]
symbol:rps2601 "40S ribosomal protein S26 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 PomBase:SPAC806.03c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
PIR:T39095 RefSeq:NP_592853.1 STRING:Q9UT56 PRIDE:Q9UT56
EnsemblFungi:SPAC806.03c.1 GeneID:2543085 KEGG:spo:SPAC806.03c
OMA:KAICVTR OrthoDB:EOG4T1MX3 NextBio:20804113 Uniprot:Q9UT56
Length = 120
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 20 FIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAI 79
F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y Y +PK+Y K+QYCVSCAI
Sbjct: 20 FVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAI 79
Query: 80 HSHXXXXXXXXXXXXXEPPKRFMRRR 105
H+ PP R R
Sbjct: 80 HARVVRVRSREGRRIRTPPPRVRYNR 105
>SGD|S000003157 [details] [associations]
symbol:RPS26A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006407 "rRNA export from nucleus" evidence=IGI] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 SGD:S000003157
EMBL:X91489 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627
PDB:3U5C PDB:3U5G PDBsum:3U5C PDBsum:3U5G GO:GO:0006407
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:KAICVTR
OrthoDB:EOG4T1MX3 EMBL:U10563 EMBL:Z72711 EMBL:EF123138 PIR:S47942
RefSeq:NP_011326.1 ProteinModelPortal:P39938 SMR:P39938
DIP:DIP-1396N IntAct:P39938 MINT:MINT-383624 STRING:P39938
PeptideAtlas:P39938 PRIDE:P39938 EnsemblFungi:YGL189C GeneID:852686
KEGG:sce:YGL189C CYGD:YGL189c GeneTree:ENSGT00390000002517
NextBio:972011 Genevestigator:P39938 GermOnline:YGL189C
Uniprot:P39938
Length = 119
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 42/80 (52%), Positives = 50/80 (62%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y Y LPK Y K+ YCVSCAIH
Sbjct: 21 VRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKR 100
+ PP+R
Sbjct: 81 ARIVRVRSREDRKNRAPPQR 100
>SGD|S000000933 [details] [associations]
symbol:RPS26B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006407 "rRNA export from
nucleus" evidence=IGI] [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 SGD:S000000933
EMBL:BK006939 GO:GO:0003735 GO:GO:0002181 EMBL:U18916 GO:GO:0022627
GO:GO:0006407 eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3
GeneTree:ENSGT00390000002517 EMBL:AY692782 EMBL:EF123142 PIR:S50634
RefSeq:NP_011057.1 ProteinModelPortal:P39939 SMR:P39939
DIP:DIP-1395N IntAct:P39939 MINT:MINT-383586 STRING:P39939
PaxDb:P39939 PRIDE:P39939 EnsemblFungi:YER131W GeneID:856868
KEGG:sce:YER131W CYGD:YER131w NextBio:983234 Genevestigator:P39939
GermOnline:YER131W Uniprot:P39939
Length = 119
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 42/80 (52%), Positives = 50/80 (62%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y Y LPK Y K+ YCVSCAIH
Sbjct: 21 VRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKR 100
+ PP+R
Sbjct: 81 ARIVRVRSREDRKNRAPPQR 100
>RGD|1559808 [details] [associations]
symbol:RGD1559808 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 RGD:1559808 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538 OrthoDB:EOG4JWVG2
IPI:IPI00193949 RefSeq:XP_001065275.1 RefSeq:XP_236845.1
PRIDE:D4AEB9 Ensembl:ENSRNOT00000045419 GeneID:316158
KEGG:rno:316158 UCSC:RGD:1559808 CTD:316158 NextBio:670501
Uniprot:D4AEB9
Length = 115
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/81 (54%), Positives = 52/81 (64%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
I C+NC C PKDKAIK+F++ NIVE AAVRD+ +A I+D YVLPKLY K+ YCVS AIH
Sbjct: 21 IGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIH 80
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S P RF
Sbjct: 81 SKVIRNQSHEARKDRTSPPRF 101
>UNIPROTKB|F1RFS4 [details] [associations]
symbol:F1RFS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 EMBL:CU466242
Ensembl:ENSSSCT00000003110 Uniprot:F1RFS4
Length = 93
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
I C+NC +C PKDKAI++F++RNIVE AAV + + ++ YVLPKLYAK YC SCAIH
Sbjct: 5 IHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIH 64
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 65 SKVIRNRSREAQKVRTPPPRF 85
>DICTYBASE|DDB_G0281677 [details] [associations]
symbol:rps26 "40S ribosomal protein S26"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
dictyBase:DDB_G0281677 GenomeReviews:CM000152_GR GO:GO:0006412
GO:GO:0005840 EMBL:AAFI02000042 GO:GO:0003735 eggNOG:COG4830
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH RefSeq:XP_640573.1
STRING:Q54TL8 PRIDE:Q54TL8 EnsemblProtists:DDB0231064
GeneID:8623182 KEGG:ddi:DDB_G0281677 ProtClustDB:PTZ00172
Uniprot:Q54TL8
Length = 112
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 18 VNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD--NYVLPKLYAKMQYCV 75
V +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ D +++ Y P+ Y K QYC+
Sbjct: 18 VPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCI 77
Query: 76 SCAIHSH 82
SCAIHSH
Sbjct: 78 SCAIHSH 84
>UNIPROTKB|J9NX11 [details] [associations]
symbol:J9NX11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 GeneTree:ENSGT00390000002517 EMBL:AAEX03000630
Ensembl:ENSCAFT00000048299 OMA:ICCTSCA Uniprot:J9NX11
Length = 115
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
I C++C +C PKDKAIK+F++ NIVE A RD+ A ++D YVLPKLY K+ YC+SCAI
Sbjct: 21 ICCTSCARCVPKDKAIKKFVIGNIVEAATSRDISQASVFDAYVLPKLYVKLHYCMSCAIR 80
Query: 81 S 81
S
Sbjct: 81 S 81
>UNIPROTKB|I3L5L2 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 Ensembl:ENSSSCT00000026366 OMA:HKDRTPP
Uniprot:I3L5L2
Length = 76
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQY 73
IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ Y
Sbjct: 22 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHY 74
>UNIPROTKB|G3N0G0 [details] [associations]
symbol:G3N0G0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0003729 GO:GO:0003735 GO:GO:0033119
GO:GO:0022627 PANTHER:PTHR12538 GeneTree:ENSGT00390000002517
EMBL:DAAA02016539 Ensembl:ENSBTAT00000064945 OMA:MVEATAI
NextBio:20927684 Uniprot:G3N0G0
Length = 114
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC++C C PKDKAIK+F++ N+VE A+RD+ +A ++D ++LPKLY K+ Y SCAIH
Sbjct: 20 IRCTSCACCMPKDKAIKKFIIWNMVEATAIRDISEASVFDAHLLPKLYVKLHYHGSCAIH 79
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S P RF
Sbjct: 80 SKVVSTHSPEAWENRTPAPRF 100
>RGD|1565117 [details] [associations]
symbol:RGD1565117 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1565117
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 OrthoDB:EOG4JWVG2 IPI:IPI00208657
RefSeq:XP_001055593.1 RefSeq:XP_235217.1 Ensembl:ENSRNOT00000045687
GeneID:299848 KEGG:rno:299848 UCSC:RGD:1565117 CTD:299848
NextBio:645892 Uniprot:D3ZJ54
Length = 106
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/81 (49%), Positives = 51/81 (62%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
IRC+NC +C PK F++RNI+E AAVRD+ +A ++D YVLPKL+ K+ YCVSCAIH
Sbjct: 21 IRCTNCAQCVPK------FIIRNIIEAAAVRDISEASVFDAYVLPKLFVKLHYCVSCAIH 74
Query: 81 SHXXXXXXXXXXXXXEPPKRF 101
S PP RF
Sbjct: 75 SKVTRNPSREDRT---PPPRF 92
>UNIPROTKB|I3L8W3 [details] [associations]
symbol:I3L8W3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 EMBL:FP236438
Ensembl:ENSSSCT00000025827 Uniprot:I3L8W3
Length = 112
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
I +NC +C PKDKAI+ F++RNI E A+R++ +A ++D V P+LY K+ Y VSCAIH
Sbjct: 21 IHYTNCAQCMPKDKAIEAFVIRNIAEAVAIRNISEARVFDACVFPELYVKLYYWVSCAIH 80
Query: 81 SH 82
S+
Sbjct: 81 SN 82
>UNIPROTKB|D4ADZ4 [details] [associations]
symbol:D4ADZ4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12538 OMA:MVEATAI IPI:IPI00778823
Ensembl:ENSRNOT00000055432 Uniprot:D4ADZ4
Length = 107
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 21 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIH 80
+ C + C PKDKAIK F+++NI+E AAVRD+ A ++ Y+LP LY K+ YCVSCAIH
Sbjct: 22 VPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVKLHYCVSCAIH 80
Query: 81 S 81
S
Sbjct: 81 S 81
>UNIPROTKB|F1M2V6 [details] [associations]
symbol:F1M2V6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 IPI:IPI00777268 Ensembl:ENSRNOT00000059861
Uniprot:F1M2V6
Length = 116
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 35/66 (53%), Positives = 43/66 (65%)
Query: 18 VNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAA--VRDVQDACIYDNYVLPKLYAKMQYCV 75
V I C NC C KDKAIK F+++N VE A VRD+ +A I+ VLPKLY ++ YC
Sbjct: 18 VQTIHCMNCAWCMLKDKAIKTFVIQNFVEAIASTVRDISEANIFSASVLPKLYVELHYC- 76
Query: 76 SCAIHS 81
SC IHS
Sbjct: 77 SCVIHS 82
>UNIPROTKB|F1M5Y5 [details] [associations]
symbol:F1M5Y5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
IPI:IPI00947677 Ensembl:ENSRNOT00000066259 Uniprot:F1M5Y5
Length = 92
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 25 NCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHS 81
NC + PKDKA K+F+ RNIVE AAVRD+ +A + D VLPK Y K+ + C IHS
Sbjct: 25 NCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL--ALLCEIHS 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.334 0.141 0.476 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 112 85 0.00091 102 3 11 21 0.45 28
29 0.46 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 556 (59 KB)
Total size of DFA: 112 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.21u 0.11s 10.32t Elapsed: 00:00:00
Total cpu time: 10.21u 0.11s 10.32t Elapsed: 00:00:00
Start: Fri May 10 02:20:15 2013 End: Fri May 10 02:20:15 2013