BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033741
MIFLVIGGINQGLICGHYMKKDESYESEFKDTISVFLPLRNGAIIDIESIQILTSPLTNK
VCPSKGTISSFTCSQGATRHMTTQKKSMMEIESVGAAGKYDIGHVKKYFRGK

High Scoring Gene Products

Symbol, full name Information P value
AT1G72880 protein from Arabidopsis thaliana 2.2e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033741
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2032652 - symbol:AT1G72880 "AT1G72880" species...   111  2.2e-17   3


>TAIR|locus:2032652 [details] [associations]
            symbol:AT1G72880 "AT1G72880" species:3702 "Arabidopsis
            thaliana" [GO:0003993 "acid phosphatase activity" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
            activity" evidence=IEA] HAMAP:MF_00060 InterPro:IPR002828
            Pfam:PF01975 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016787
            HOGENOM:HOG000122501 KO:K03787 Gene3D:3.40.1210.10 SUPFAM:SSF64167
            EMBL:BT006375 EMBL:AK227308 IPI:IPI00520134 RefSeq:NP_177431.1
            RefSeq:NP_849880.1 UniGene:At.11672 ProteinModelPortal:Q84MD7
            SMR:Q84MD7 STRING:Q84MD7 PRIDE:Q84MD7 EnsemblPlants:AT1G72880.1
            EnsemblPlants:AT1G72880.2 GeneID:843619 KEGG:ath:AT1G72880
            TAIR:At1g72880 InParanoid:Q84MD7 OMA:EMFHSSA PhylomeDB:Q84MD7
            ProtClustDB:CLSN2679609 Genevestigator:Q84MD7 Uniprot:Q84MD7
        Length = 385

 Score = 111 (44.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
 Identities = 24/35 (68%), Positives = 27/35 (77%)

Query:    76 GATRHMTTQKKSMMEIESVGAAGKYDIGHVKKYFR 110
             GA R  TTQKKS++EIESVG AGK D   VKK+FR
Sbjct:   296 GAARRFTTQKKSIVEIESVGVAGKTDT-RVKKFFR 329

 Score = 85 (35.0 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
 Identities = 24/51 (47%), Positives = 29/51 (56%)

Query:    20 KKDESYESEFKDTISVFLPLRNGAIIDIE----------SIQILTSPLTNK 60
             KK+ES ES FKD + V LPL N  I DI           +I+I TSP +NK
Sbjct:   194 KKNESQESHFKDAVGVCLPLINATIRDIAKGVFPKDCSLNIEIPTSPSSNK 244

 Score = 62 (26.9 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
 Identities = 12/16 (75%), Positives = 12/16 (75%)

Query:     4 LVIGGINQGLICGHYM 19
             LVI GINQG  CGH M
Sbjct:   152 LVISGINQGSSCGHQM 167


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112       112   0.00091  102 3  11 22  0.45    30
                                                     29  0.43    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  535 (57 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.40u 0.09s 12.49t   Elapsed:  00:00:01
  Total cpu time:  12.40u 0.09s 12.49t   Elapsed:  00:00:01
  Start:  Fri May 10 02:22:32 2013   End:  Fri May 10 02:22:33 2013

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