Query 033742
Match_columns 112
No_of_seqs 118 out of 1114
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 09:19:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jee_A YIIU; FTSZ, septum, coi 93.8 0.62 2.1E-05 28.3 8.0 43 57-104 3-45 (81)
2 2dgc_A Protein (GCN4); basic d 87.7 2.1 7E-05 24.5 5.7 36 71-110 19-54 (63)
3 1dh3_A Transcription factor CR 87.3 2.5 8.5E-05 23.5 5.8 35 72-110 12-46 (55)
4 2wt7_A Proto-oncogene protein 85.2 3.6 0.00012 23.3 5.8 35 72-110 13-47 (63)
5 1dip_A Delta-sleep-inducing pe 84.4 2 6.8E-05 25.6 4.4 27 82-108 18-44 (78)
6 1t2k_D Cyclic-AMP-dependent tr 83.8 4.1 0.00014 22.8 5.8 34 72-109 12-45 (61)
7 1jnm_A Proto-oncogene C-JUN; B 81.9 5.1 0.00017 22.5 5.8 36 71-110 11-46 (62)
8 1ci6_A Transcription factor AT 76.6 8.1 0.00028 21.8 5.8 35 71-109 12-46 (63)
9 2oqq_A Transcription factor HY 76.1 6.8 0.00023 20.6 5.0 26 84-109 15-40 (42)
10 2yy0_A C-MYC-binding protein; 74.9 8.4 0.00029 21.2 4.9 28 83-110 23-50 (53)
11 2w6a_A ARF GTPase-activating p 73.1 10 0.00036 21.5 8.2 53 55-107 8-62 (63)
12 1j1d_C Troponin I, TNI; THIN f 64.5 27 0.00092 22.8 9.8 66 33-98 29-105 (133)
13 1ytz_T Troponin T; muscle, THI 61.5 27 0.00094 21.9 5.9 46 53-98 38-89 (107)
14 1gd2_E Transcription factor PA 60.7 22 0.00076 20.6 6.6 39 71-109 18-59 (70)
15 1j1d_B Troponin T, TNT; THIN f 58.9 25 0.00087 22.1 5.2 46 53-98 38-89 (106)
16 1hjb_A Ccaat/enhancer binding 57.3 29 0.001 20.9 5.8 21 89-109 39-59 (87)
17 1a93_B MAX protein, coiled coi 56.7 18 0.0006 18.2 4.0 25 78-102 6-30 (34)
18 1j1e_C Troponin I, TNI; THIN f 55.1 48 0.0016 22.8 9.3 66 33-98 29-105 (180)
19 1gu4_A CAAT/enhancer binding p 54.3 31 0.0011 20.4 5.8 34 72-109 26-59 (78)
20 2dfs_A Myosin-5A; myosin-V, in 53.9 1.1E+02 0.0037 26.5 11.9 22 89-110 1019-1040(1080)
21 1gk7_A Vimentin; intermediate 49.5 26 0.00088 18.0 4.9 28 84-111 11-38 (39)
22 1go4_E MAD1 (mitotic arrest de 47.4 28 0.00097 21.6 4.0 23 87-109 13-35 (100)
23 2v71_A Nuclear distribution pr 45.8 71 0.0024 22.0 11.3 30 21-50 8-37 (189)
24 3nmd_A CGMP dependent protein 45.1 45 0.0015 19.5 6.8 43 62-109 21-63 (72)
25 3p57_A Myocyte-specific enhanc 43.2 6.5 0.00022 24.1 0.5 14 1-14 61-74 (90)
26 3m48_A General control protein 42.8 27 0.00093 17.3 2.7 18 91-108 5-22 (33)
27 2oxj_A Hybrid alpha/beta pepti 40.3 36 0.0012 17.0 3.0 11 96-106 18-28 (34)
28 1g6u_A Domain swapped dimer; d 36.8 46 0.0016 17.3 4.7 26 55-80 15-40 (48)
29 1e52_A Excinuclease ABC subuni 36.7 35 0.0012 19.3 3.0 33 62-94 26-58 (63)
30 3gp4_A Transcriptional regulat 35.6 87 0.003 20.0 7.3 53 56-109 59-111 (142)
31 3s9g_A Protein hexim1; cyclin 33.8 86 0.0029 19.5 7.2 23 86-108 65-87 (104)
32 3q4f_C DNA repair protein XRCC 33.4 56 0.0019 22.5 4.0 25 85-109 160-184 (186)
33 1m1j_C Fibrinogen gamma chain; 32.6 1.2E+02 0.0041 23.3 6.2 46 2-53 26-71 (409)
34 2oa5_A Hypothetical protein BQ 31.5 99 0.0034 19.5 6.9 57 25-81 10-68 (110)
35 3na7_A HP0958; flagellar bioge 30.0 1.4E+02 0.0049 20.9 10.1 44 58-101 88-133 (256)
36 3s4r_A Vimentin; alpha-helix, 29.9 93 0.0032 18.7 7.9 27 83-109 53-79 (93)
37 2jo8_A Serine/threonine-protei 29.9 72 0.0025 17.4 3.6 11 54-64 7-17 (51)
38 3w03_C DNA repair protein XRCC 28.7 85 0.0029 21.6 4.3 27 83-109 149-175 (184)
39 1x4t_A Hypothetical protein LO 27.9 1.1E+02 0.0037 18.7 5.6 33 23-55 52-84 (92)
40 3m9b_A Proteasome-associated A 27.2 1.4E+02 0.0047 21.6 5.4 42 61-107 55-96 (251)
41 2jee_A YIIU; FTSZ, septum, coi 25.7 1.1E+02 0.0038 18.2 5.4 21 85-105 40-60 (81)
42 3thf_A Protein shroom; coiled- 25.2 1.5E+02 0.005 20.5 5.0 32 74-109 11-42 (190)
43 1wlq_A Geminin; coiled-coil; 2 24.3 1.2E+02 0.0041 18.1 4.1 23 84-106 43-65 (83)
44 2aze_A Transcription factor DP 23.5 1.7E+02 0.0058 19.5 7.9 48 58-107 3-50 (155)
45 1am9_A Srebp-1A, protein (ster 22.7 1.2E+02 0.0041 17.6 4.2 24 87-110 51-74 (82)
46 2l5g_A GPS2 protein, G protein 22.5 88 0.003 15.9 3.7 20 86-105 15-34 (38)
47 2zxx_A Geminin; coiled-coil, c 22.5 1.1E+02 0.0039 18.0 3.6 23 84-106 39-61 (79)
48 1nkp_B MAX protein, MYC proto- 22.2 1.2E+02 0.0042 17.4 5.1 26 86-111 54-79 (83)
49 3qh9_A Liprin-beta-2; coiled-c 22.0 1.4E+02 0.0046 17.8 5.5 26 79-104 19-44 (81)
50 3anw_B GINS23, putative unchar 21.8 1.9E+02 0.0065 19.5 5.6 50 32-82 82-133 (171)
51 3u1c_A Tropomyosin alpha-1 cha 21.6 1.4E+02 0.0049 18.0 5.5 40 61-100 59-100 (101)
52 3gpv_A Transcriptional regulat 21.6 1.7E+02 0.0057 18.7 7.3 54 56-110 73-126 (148)
53 1a92_A Delta antigen; leucine 21.3 1.1E+02 0.0037 16.5 5.2 35 67-103 4-38 (50)
54 2wg5_A General control protein 20.5 1.3E+02 0.0043 18.5 3.7 27 81-107 9-35 (109)
No 1
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=93.82 E-value=0.62 Score=28.27 Aligned_cols=43 Identities=23% Similarity=0.420 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 57 LNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLR 104 (112)
Q Consensus 57 Ls~~eL~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~ 104 (112)
+|++=|.+||..+..|+..| .++..+|+.|+.+...|..+|..
T Consensus 3 MS~ElleqLE~KIq~avdtI-----~lLqmEieELKekN~~L~~e~~e 45 (81)
T 2jee_A 3 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999987 45555677777776664444433
No 2
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=87.72 E-value=2.1 Score=24.52 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 71 GGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 71 ~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
.|..+.|.||... +..|..++..|..+|..|..+++
T Consensus 19 eAArrsR~RK~~~----~~~Le~~v~~L~~eN~~L~~ev~ 54 (63)
T 2dgc_A 19 EAARRSRARKLQR----MKQLEDKVEELLSKNYHLENEVA 54 (63)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556668887765 46666677777777777766553
No 3
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=87.30 E-value=2.5 Score=23.48 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 72 GLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 72 al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
|..+-|.||... ++.|..++..|..+|..|..++.
T Consensus 12 sA~rSR~RKk~~----~~~LE~~v~~L~~eN~~L~~~~~ 46 (55)
T 1dh3_A 12 AARESRRKKKEY----VKSLENRVAVLENQNKTLIEELK 46 (55)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 334457777654 47777888888888888887664
No 4
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=85.15 E-value=3.6 Score=23.30 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 72 GLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 72 al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
|..+-|.||.+. +..|..++..|..+|..|...|.
T Consensus 13 AA~rcR~rKk~~----~~~Le~~v~~L~~~n~~L~~ei~ 47 (63)
T 2wt7_A 13 AAAKCRNRRREL----TDTLQAETDQLEDEKSALQTEIA 47 (63)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 445558888765 46677777777777777776653
No 5
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=84.44 E-value=2 Score=25.57 Aligned_cols=27 Identities=41% Similarity=0.411 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 033742 82 ERLLNEIDALRRKEAQLTEENLRLKQH 108 (112)
Q Consensus 82 ~ll~~~i~~lk~ke~~l~een~~L~~~ 108 (112)
+++.++|.+|..+...|+.||..|+.-
T Consensus 18 evLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 18 EILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999998863
No 6
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=83.83 E-value=4.1 Score=22.83 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 72 GLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 72 al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
|..+-|.+|.+. +..|..++..|..+|..|..++
T Consensus 12 AA~k~R~rKk~~----~~~Le~~~~~L~~~n~~L~~~i 45 (61)
T 1t2k_D 12 AASRSRQKRKVW----VQSLEKKAEDLSSLNGQLQSEV 45 (61)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 445558777764 3566666666666666666554
No 7
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=81.92 E-value=5.1 Score=22.53 Aligned_cols=36 Identities=28% Similarity=0.189 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 71 GGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 71 ~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
.|..+-|.+|.+. +..|..++..|..+|..|..++.
T Consensus 11 ~AA~k~R~rKk~~----~~~Le~~v~~L~~~n~~L~~~v~ 46 (62)
T 1jnm_A 11 IAASKSRKRKLER----IARLEEKVKTLKAQNSELASTAN 46 (62)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777765 46677777777777777766653
No 8
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=76.63 E-value=8.1 Score=21.85 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 71 GGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 71 ~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
.|..+-|.+|..- +..+..+...|..+|..|..++
T Consensus 12 ~AA~R~R~KKk~~----~~~le~~~~~L~~~N~~L~~~i 46 (63)
T 1ci6_A 12 TAATRYRQKKRAE----QEALTGECKELEKKNEALKERA 46 (63)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667666543 3444555555555555554443
No 9
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=76.07 E-value=6.8 Score=20.65 Aligned_cols=26 Identities=27% Similarity=0.340 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 84 LLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 84 l~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
+......|..++..|+.||..|++-+
T Consensus 15 le~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 15 LENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 45567888999999999999998765
No 10
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=74.90 E-value=8.4 Score=21.18 Aligned_cols=28 Identities=29% Similarity=0.383 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 83 RLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 83 ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
-|..++..|+.|...|..++..|+.+++
T Consensus 23 aLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 23 LLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456778888898889999988888764
No 11
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=73.11 E-value=10 Score=21.47 Aligned_cols=53 Identities=30% Similarity=0.475 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 55 QELNMEELMRLEKSLEGGLSRVVQ--TKGERLLNEIDALRRKEAQLTEENLRLKQ 107 (112)
Q Consensus 55 ~~Ls~~eL~~LE~qLe~al~~IR~--rK~~ll~~~i~~lk~ke~~l~een~~L~~ 107 (112)
++.++.|-..+-.-|-.|=.+|-. +=+.-+.+++.-++++...|+.+|..|+.
T Consensus 8 gpit~qeylevK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~ 62 (63)
T 2w6a_A 8 GAVTLQEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQ 62 (63)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhcc
Confidence 356777777777666666555541 11224567888899999999999999874
No 12
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=64.47 E-value=27 Score=22.85 Aligned_cols=66 Identities=26% Similarity=0.306 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhhcchhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Q 033742 33 AILSKEMADRTRELRQMKGE-----ELQELNMEELMRLEKSLEGGLSRVVQTKGERLL------NEIDALRRKEAQL 98 (112)
Q Consensus 33 ~~l~~~~~~L~~~~R~l~Ge-----dL~~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~------~~i~~lk~ke~~l 98 (112)
+.|.++-+.....-+.++.| +++++|.++|+.+=+.|...+..+=+-|+.+-. -+|..|+.++..+
T Consensus 29 e~l~kE~e~k~eeKkkiLaER~~pL~id~ls~~~L~e~~keLh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~rV~Dl 105 (133)
T 1j1d_C 29 QELEREAEERRGEKGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDL 105 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHcchHHHHHHHHHHHH
Confidence 45566666666666666664 788889999999999999999999888877642 2466666665544
No 13
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=61.45 E-value=27 Score=21.92 Aligned_cols=46 Identities=26% Similarity=0.193 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Q 033742 53 ELQELNMEELMRLEKSLEGGLSRVVQTKGERLL------NEIDALRRKEAQL 98 (112)
Q Consensus 53 dL~~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~------~~i~~lk~ke~~l 98 (112)
++++||.++|+.+=+.|...+..+=+-|..+-. -+|..|+.++..+
T Consensus 38 ~id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~rV~dl 89 (107)
T 1ytz_T 38 NIDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNRIDQA 89 (107)
T ss_dssp CCSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHh
Confidence 788899999999999999999999888877642 2455555555443
No 14
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=60.73 E-value=22 Score=20.61 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 71 GGLSRVVQTKGERLL---NEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 71 ~al~~IR~rK~~ll~---~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
.|=...|.||.+-+. .++..+......+..+|..|+..+
T Consensus 18 ~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i 59 (70)
T 1gd2_E 18 AAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKV 59 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556667666443 355555555555666666666654
No 15
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=58.86 E-value=25 Score=22.05 Aligned_cols=46 Identities=22% Similarity=0.190 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Q 033742 53 ELQELNMEELMRLEKSLEGGLSRVVQTKGERLL------NEIDALRRKEAQL 98 (112)
Q Consensus 53 dL~~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~------~~i~~lk~ke~~l 98 (112)
++++||.++|+.+=+.|...+..+=+-|..+-. -+|..|+.++..+
T Consensus 38 ~id~l~~~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI~eL~~rV~dl 89 (106)
T 1j1d_B 38 AIDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEINVLRNRINDN 89 (106)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHHHHHHHHHHHh
Confidence 789999999999999999999999888887642 2456666665544
No 16
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=57.28 E-value=29 Score=20.94 Aligned_cols=21 Identities=33% Similarity=0.352 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 033742 89 DALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 89 ~~lk~ke~~l~een~~L~~~~ 109 (112)
..+..+...|..+|..|+.+|
T Consensus 39 ~e~~~r~~~Le~EN~~Lr~~v 59 (87)
T 1hjb_A 39 LETQHKVLELTAENERLQKKV 59 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555554
No 17
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=56.74 E-value=18 Score=18.19 Aligned_cols=25 Identities=28% Similarity=0.473 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 78 QTKGERLLNEIDALRRKEAQLTEEN 102 (112)
Q Consensus 78 ~rK~~ll~~~i~~lk~ke~~l~een 102 (112)
.||..-....|+.++++...|.++-
T Consensus 6 RrKn~a~qqDIddlkrQN~~Le~Qi 30 (34)
T 1a93_B 6 RRKNDTHQQDIDDLKRQNALLEQQV 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHhhHHHHHHHHHHHHHHH
Confidence 4677777777888777776666554
No 18
>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2
Probab=55.13 E-value=48 Score=22.77 Aligned_cols=66 Identities=26% Similarity=0.306 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhhcchhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Q 033742 33 AILSKEMADRTRELRQMKGE-----ELQELNMEELMRLEKSLEGGLSRVVQTKGERLL------NEIDALRRKEAQL 98 (112)
Q Consensus 33 ~~l~~~~~~L~~~~R~l~Ge-----dL~~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~------~~i~~lk~ke~~l 98 (112)
+.|.++-+.....-+.++.| ++++||..+|+.+=+.|...+..+=+-|+.+-. -+|..|+.++..|
T Consensus 29 e~L~~E~e~k~eEKkkiLaER~kPLnid~Lse~~L~e~ckELh~~I~~LEeEKYDlE~kvkkqdyEI~dL~~rV~DL 105 (180)
T 1j1e_C 29 QELEREAEERRGEKGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDL 105 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchhHHHHHHHHHHH
Confidence 44566666666666666664 777889999999999999999999888877643 2466676666655
No 19
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=54.27 E-value=31 Score=20.36 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 72 GLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 72 al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
|..+-|.++... ...+..++..|..+|..|..+|
T Consensus 26 AakrSR~krk~r----~~e~~~r~~~L~~eN~~L~~~v 59 (78)
T 1gu4_A 26 AVRKSRDKAKMR----NLETQHKVLELTAENERLQKKV 59 (78)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 444445444332 2344455555666666665554
No 20
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=53.90 E-value=1.1e+02 Score=26.49 Aligned_cols=22 Identities=23% Similarity=0.170 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 033742 89 DALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 89 ~~lk~ke~~l~een~~L~~~~~ 110 (112)
+.|+.++..|..+|..|+.+++
T Consensus 1019 ~~L~~kv~~L~~e~~~L~qq~~ 1040 (1080)
T 2dfs_A 1019 HETEQLVSELKEQNTLLKTEKE 1040 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888888764
No 21
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=49.49 E-value=26 Score=17.95 Aligned_cols=28 Identities=18% Similarity=0.058 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 033742 84 LLNEIDALRRKEAQLTEENLRLKQHFIW 111 (112)
Q Consensus 84 l~~~i~~lk~ke~~l~een~~L~~~~~~ 111 (112)
+.+.....=.|++.|+.+|..|..++..
T Consensus 11 LNdrlAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 11 LNDRFANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555567899999999999988753
No 22
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=47.42 E-value=28 Score=21.64 Aligned_cols=23 Identities=39% Similarity=0.453 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 033742 87 EIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 87 ~i~~lk~ke~~l~een~~L~~~~ 109 (112)
++..++++...|..+|..|+..+
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~ 35 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEK 35 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666544
No 23
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=45.83 E-value=71 Score=22.03 Aligned_cols=30 Identities=7% Similarity=0.007 Sum_probs=18.7
Q ss_pred chHHHHHhHHHHHHHHHHHHHHHHHhhcch
Q 033742 21 PSLQLQLESSTYAILSKEMADRTRELRQMK 50 (112)
Q Consensus 21 ~~~~~~~~~~e~~~l~~~~~~L~~~~R~l~ 50 (112)
+.....+|+..+..++..+..++...--|.
T Consensus 8 ~~ee~~ywk~~~~~~~q~~~~le~El~EFq 37 (189)
T 2v71_A 8 LKEETAYWKELSMKYKQSFQEARDELVEFQ 37 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456777777777777777765554444
No 24
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=45.13 E-value=45 Score=19.50 Aligned_cols=43 Identities=23% Similarity=0.214 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 62 LMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 62 L~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
+..|+..|......||.+... |..+.+.......+...|+.++
T Consensus 21 i~eLq~~L~~K~eELr~kd~~-----I~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 21 LRDLQYALQEKIEELRQRDAL-----IDELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888888876553 4666666666666666666655
No 25
>3p57_A Myocyte-specific enhancer factor 2A; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3kov_A* 1tqe_P 1n6j_A
Probab=43.24 E-value=6.5 Score=24.11 Aligned_cols=14 Identities=14% Similarity=0.150 Sum_probs=11.1
Q ss_pred ChHHHHHHhhhhhh
Q 033742 1 MKQVIDRHNLHSQN 14 (112)
Q Consensus 1 m~~ileRY~~~~~~ 14 (112)
|..||+||+.++..
T Consensus 61 ~~~il~rY~~~~~~ 74 (90)
T 3p57_A 61 MDKVLLKYTEYNEP 74 (90)
T ss_dssp HHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhcCcc
Confidence 56899999988653
No 26
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=42.82 E-value=27 Score=17.32 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 033742 91 LRRKEAQLTEENLRLKQH 108 (112)
Q Consensus 91 lk~ke~~l~een~~L~~~ 108 (112)
|..|+..|..+|..|...
T Consensus 5 LE~kVEeLl~~n~~Le~E 22 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENE 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHH
Confidence 334444444444444443
No 27
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=40.27 E-value=36 Score=16.97 Aligned_cols=11 Identities=45% Similarity=0.543 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q 033742 96 AQLTEENLRLK 106 (112)
Q Consensus 96 ~~l~een~~L~ 106 (112)
..|+.+...|+
T Consensus 18 ~~Le~eV~rLk 28 (34)
T 2oxj_A 18 XHLEXEVXRLK 28 (34)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 33344443433
No 28
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=36.81 E-value=46 Score=17.27 Aligned_cols=26 Identities=27% Similarity=0.317 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 033742 55 QELNMEELMRLEKSLEGGLSRVVQTK 80 (112)
Q Consensus 55 ~~Ls~~eL~~LE~qLe~al~~IR~rK 80 (112)
+++|.+||--||..|+.--.++-+-|
T Consensus 15 egfspeelaaleselqalekklaalk 40 (48)
T 1g6u_A 15 EGFSPEELAALESELQALEKKLAALK 40 (48)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999988765444443333
No 29
>1e52_A Excinuclease ABC subunit; DNA excision repair, UVRB, DNA repair, UVRC binding domain; NMR {Escherichia coli} SCOP: a.2.9.1 PDB: 1qoj_A
Probab=36.69 E-value=35 Score=19.29 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 62 LMRLEKSLEGGLSRVVQTKGERLLNEIDALRRK 94 (112)
Q Consensus 62 L~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~k 94 (112)
+..|+.++..|.....--+--.+.++|..|+..
T Consensus 26 i~~Le~~M~~AA~~leFE~AA~lRD~I~~L~~~ 58 (63)
T 1e52_A 26 IHELEGLMMQHAQNLEFEEAAQIRDQLHQLREL 58 (63)
T ss_dssp HHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 566788888888777766666777777777654
No 30
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=35.57 E-value=87 Score=20.04 Aligned_cols=53 Identities=19% Similarity=0.181 Sum_probs=25.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 56 ELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 56 ~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
++|+++...+=.....+-..+..+ ..++.+++..+..+...|......|..++
T Consensus 59 G~sL~eIk~~l~~~~~~~~~~~~~-~~~L~~~~~~l~~~i~~L~~~~~~L~~~i 111 (142)
T 3gp4_A 59 GLSIEALIDYLALFREGEHTLEAR-AELLKKQRIELKNRIDVMQEALDRLDFKI 111 (142)
T ss_dssp TCCHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478887776644333221111111 23445555555555555555555554443
No 31
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=33.78 E-value=86 Score=19.48 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 033742 86 NEIDALRRKEAQLTEENLRLKQH 108 (112)
Q Consensus 86 ~~i~~lk~ke~~l~een~~L~~~ 108 (112)
.+|..|..++..|..+|..|...
T Consensus 65 ~~v~eLe~everL~~ENq~L~~e 87 (104)
T 3s9g_A 65 ARVRELELELDRLRAENLQLLTE 87 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666666543
No 32
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=33.39 E-value=56 Score=22.52 Aligned_cols=25 Identities=32% Similarity=0.466 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 85 LNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 85 ~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
.+.|..|+.+...|++||..|....
T Consensus 160 L~~i~~L~a~N~hLqkENeRL~~e~ 184 (186)
T 3q4f_C 160 LDTIAENQAKNEHLQKENERLLRDW 184 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4678889999999999999997653
No 33
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=32.57 E-value=1.2e+02 Score=23.32 Aligned_cols=46 Identities=7% Similarity=0.062 Sum_probs=23.4
Q ss_pred hHHHHHHhhhhhhccccCCchHHHHHhHHHHHHHHHHHHHHHHHhhcchhcC
Q 033742 2 KQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEE 53 (112)
Q Consensus 2 ~~ileRY~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~L~~~~R~l~Ged 53 (112)
..+|.+|++..... -..++..-.++..+...+..|...+.....++
T Consensus 26 ~d~L~k~e~~V~~~------l~~LE~~l~elsn~ts~v~~Lvk~iq~~~~~~ 71 (409)
T 1m1j_C 26 ADFFNKYRLTTDGE------LLEIEGLLQQATNSTGSIEYLIQHIKTIYPSE 71 (409)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHhcchhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45677776644321 11233444555666666666555555544443
No 34
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=31.48 E-value=99 Score=19.49 Aligned_cols=57 Identities=12% Similarity=-0.005 Sum_probs=38.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHhhc--chhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 25 LQLESSTYAILSKEMADRTRELRQ--MKGEELQELNMEELMRLEKSLEGGLSRVVQTKG 81 (112)
Q Consensus 25 ~~~~~~e~~~l~~~~~~L~~~~R~--l~GedL~~Ls~~eL~~LE~qLe~al~~IR~rK~ 81 (112)
++.+.+++.+|+-+|..|++.++. =.+.+=..||..+=+.+=...-.+|+..=++|.
T Consensus 10 ~EeLaaeL~kLqmENK~LKkkl~~~g~~~p~d~~LTp~qKea~I~s~~~~Lss~A~~KI 68 (110)
T 2oa5_A 10 YEEMVKEVERLKLENKTLKQKVKSSGAVSSDDSILTAAKRESIIVSSSRALGAVAMRKI 68 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC---------CCBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999999988876 222455668988877776666666665544443
No 35
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=30.04 E-value=1.4e+02 Score=20.86 Aligned_cols=44 Identities=27% Similarity=0.210 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 033742 58 NMEELMRLEKSLEGGLSRVVQTKGERL--LNEIDALRRKEAQLTEE 101 (112)
Q Consensus 58 s~~eL~~LE~qLe~al~~IR~rK~~ll--~~~i~~lk~ke~~l~ee 101 (112)
+.+|+..|.+.++.+-.++...-.+++ ++.++.++.....+...
T Consensus 88 ~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~ 133 (256)
T 3na7_A 88 SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKE 133 (256)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999988877776655544 45565555444433333
No 36
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=29.94 E-value=93 Score=18.70 Aligned_cols=27 Identities=30% Similarity=0.374 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 83 RLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 83 ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
.....|..|+++...+..++..|..++
T Consensus 53 ~ye~~i~~Lr~~i~~~~~ek~~l~~e~ 79 (93)
T 3s4r_A 53 LYEEEMRELRRQVDQLTNDKARVEVER 79 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777777776666665543
No 37
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=29.89 E-value=72 Score=17.36 Aligned_cols=11 Identities=27% Similarity=0.579 Sum_probs=7.5
Q ss_pred CCCCCHHHHHH
Q 033742 54 LQELNMEELMR 64 (112)
Q Consensus 54 L~~Ls~~eL~~ 64 (112)
|..||++||.+
T Consensus 7 Lk~ls~eEL~~ 17 (51)
T 2jo8_A 7 LKSWTVEDLQK 17 (51)
T ss_dssp GGGSCHHHHHH
T ss_pred HHhCCHHHHHH
Confidence 44568888765
No 38
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=28.67 E-value=85 Score=21.57 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 83 RLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 83 ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
-.++.+..|+.++..|..+|..|....
T Consensus 149 ~~ld~~~~L~~~n~~LqkeNeRL~~E~ 175 (184)
T 3w03_C 149 YCLDTIAENQAKNEHLQKENERLLRDW 175 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446788888889888999999888753
No 39
>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1
Probab=27.85 E-value=1.1e+02 Score=18.72 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=27.0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhcchhcCCC
Q 033742 23 LQLQLESSTYAILSKEMADRTRELRQMKGEELQ 55 (112)
Q Consensus 23 ~~~~~~~~e~~~l~~~~~~L~~~~R~l~GedL~ 55 (112)
.....++.|+.+|-.+-...+..++.|.|.|-.
T Consensus 52 ~~IRdLNDEINkL~rEK~~WE~rI~eLGGpdY~ 84 (92)
T 1x4t_A 52 FRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 84 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 334567889999999999999999999998854
No 40
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=27.18 E-value=1.4e+02 Score=21.58 Aligned_cols=42 Identities=24% Similarity=0.389 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQ 107 (112)
Q Consensus 61 eL~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~ 107 (112)
.+..|+.+++.. +.|++.|.+.+..++++...|.+++..|..
T Consensus 55 ~l~eL~~ql~~L-----~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 55 DIHQLEARIDSL-----AARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp HHHHHHHHHHHH-----TTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456666666443 345566777889999999999999988764
No 41
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=25.71 E-value=1.1e+02 Score=18.17 Aligned_cols=21 Identities=24% Similarity=0.378 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 033742 85 LNEIDALRRKEAQLTEENLRL 105 (112)
Q Consensus 85 ~~~i~~lk~ke~~l~een~~L 105 (112)
.++...++.....|..+|..|
T Consensus 40 ~~e~~e~~~~~~~L~~en~qL 60 (81)
T 2jee_A 40 SQEVQNAQHQREELERENNHL 60 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHH
Confidence 344444333333333333333
No 42
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=25.17 E-value=1.5e+02 Score=20.53 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 033742 74 SRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHF 109 (112)
Q Consensus 74 ~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~ 109 (112)
+.|..+|.+++ ..|++|...|.++-..|...+
T Consensus 11 ~~i~~Kk~ELi----~~L~~kL~~L~~eqe~l~ee~ 42 (190)
T 3thf_A 11 NLIKQKMDELI----KHLNQKIVSLKREQQTISEEC 42 (190)
T ss_dssp CHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 45778888775 677777777777666665543
No 43
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=24.31 E-value=1.2e+02 Score=18.12 Aligned_cols=23 Identities=35% Similarity=0.384 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 033742 84 LLNEIDALRRKEAQLTEENLRLK 106 (112)
Q Consensus 84 l~~~i~~lk~ke~~l~een~~L~ 106 (112)
|...|+.++.....|.++|..|+
T Consensus 43 Lh~~ie~~~eEi~~Lk~en~~L~ 65 (83)
T 1wlq_A 43 LHKEIEQKDSEIARLRKENKDLA 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555544
No 44
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=23.45 E-value=1.7e+02 Score=19.51 Aligned_cols=48 Identities=21% Similarity=0.169 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 58 NMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQ 107 (112)
Q Consensus 58 s~~eL~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~ 107 (112)
|..|...||..-.....+|+.++.++ .++.....=-+.|.+.|..+..
T Consensus 3 s~qe~~~Le~Ek~~~~~rI~~K~~~L--qeL~~Q~vafknLv~RN~~~e~ 50 (155)
T 2aze_A 3 FAQECQNLEVERQRRLERIKQKQSQL--QELILQQIAFKNLVQRNRHAEQ 50 (155)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 67889999999999999998877664 2222222223456666766653
No 45
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=22.75 E-value=1.2e+02 Score=17.56 Aligned_cols=24 Identities=29% Similarity=0.389 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 87 EIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 87 ~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
-|..|+..+..|.+++..|...+.
T Consensus 51 YI~~Lq~~~~~L~~e~~~L~~~~~ 74 (82)
T 1am9_A 51 YIRFLQHSNQKLKQENLSLRTAVH 74 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777776553
No 46
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=22.49 E-value=88 Score=15.88 Aligned_cols=20 Identities=35% Similarity=0.361 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 033742 86 NEIDALRRKEAQLTEENLRL 105 (112)
Q Consensus 86 ~~i~~lk~ke~~l~een~~L 105 (112)
+||..++.+...|.++.-.|
T Consensus 15 eQi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 15 EQILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666665544
No 47
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=22.45 E-value=1.1e+02 Score=18.04 Aligned_cols=23 Identities=35% Similarity=0.384 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 033742 84 LLNEIDALRRKEAQLTEENLRLK 106 (112)
Q Consensus 84 l~~~i~~lk~ke~~l~een~~L~ 106 (112)
+..+|+.++.....|.++|..|.
T Consensus 39 Lh~~ie~~~eEi~~LkeEN~~L~ 61 (79)
T 2zxx_A 39 LHKEIEQKDSEIARLRKENKDLA 61 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555443
No 48
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=22.19 E-value=1.2e+02 Score=17.39 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 033742 86 NEIDALRRKEAQLTEENLRLKQHFIW 111 (112)
Q Consensus 86 ~~i~~lk~ke~~l~een~~L~~~~~~ 111 (112)
.++..+......|..+|..|..++..
T Consensus 54 ~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 54 RKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666667777777766643
No 49
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=21.96 E-value=1.4e+02 Score=17.82 Aligned_cols=26 Identities=35% Similarity=0.463 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 79 TKGERLLNEIDALRRKEAQLTEENLR 104 (112)
Q Consensus 79 rK~~ll~~~i~~lk~ke~~l~een~~ 104 (112)
+|.+=+..+|..|+-++..+..+...
T Consensus 19 ~~~E~L~qEi~~Lr~kv~elEnErlQ 44 (81)
T 3qh9_A 19 RKAEELLQELRHLKIKVEELENERNQ 44 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556666666665555554433
No 50
>3anw_B GINS23, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=21.79 E-value=1.9e+02 Score=19.49 Aligned_cols=50 Identities=18% Similarity=0.106 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcchhcCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 32 YAILSKEMADRTRELRQMKGEELQEL--NMEELMRLEKSLEGGLSRVVQTKGE 82 (112)
Q Consensus 32 ~~~l~~~~~~L~~~~R~l~GedL~~L--s~~eL~~LE~qLe~al~~IR~rK~~ 82 (112)
+.+.+.-+..|+..+|.-.+.|++++ .+++|..+...+.. |..+|-+|.=
T Consensus 82 Y~rvr~yI~~Le~ei~~~~~~d~~~~~~kl~elk~~~~~l~~-L~~~Ri~KIv 133 (171)
T 3anw_B 82 YERAEFYAYYLENYVRLNPRESVDTINVKLTKLANLRKKLRD-LKLIRFNKIL 133 (171)
T ss_dssp HHHHHHHHHHHHHHTTCCC-------CCHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 46778889999999999888887763 34688777776653 5555777653
No 51
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=21.59 E-value=1.4e+02 Score=18.00 Aligned_cols=40 Identities=13% Similarity=0.146 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 033742 61 ELMRLEKSLEGGLSRVVQTKGER--LLNEIDALRRKEAQLTE 100 (112)
Q Consensus 61 eL~~LE~qLe~al~~IR~rK~~l--l~~~i~~lk~ke~~l~e 100 (112)
||...+.+|..+.......-... --.++..|.+++..|++
T Consensus 59 eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllEE 100 (101)
T 3u1c_A 59 SRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVEE 100 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44444555555544443321111 12256666666665543
No 52
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=21.55 E-value=1.7e+02 Score=18.71 Aligned_cols=54 Identities=6% Similarity=0.076 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033742 56 ELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHFI 110 (112)
Q Consensus 56 ~Ls~~eL~~LE~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~~L~~~~~ 110 (112)
++|+++...+=.....+-..+.. -..++.+++..+..+...|......|..+++
T Consensus 73 G~sL~eIk~~l~~~~~~~~~~~~-~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~ 126 (148)
T 3gpv_A 73 GMPIQKIKQFIDWSMEGDSTILH-RLKLMKQQEANVLQLIQDTEKNLKKIQQKIA 126 (148)
T ss_dssp TCCHHHHHHHHHHHHHCGGGHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58888877765433222111111 1235556666666666666666666655543
No 53
>1a92_A Delta antigen; leucine zipper, coiled-coil, oligomerization; 1.80A {Hepatitis delta virus} SCOP: h.4.6.1 PDB: 1by0_A
Probab=21.26 E-value=1.1e+02 Score=16.46 Aligned_cols=35 Identities=31% Similarity=0.340 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 67 KSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103 (112)
Q Consensus 67 ~qLe~al~~IR~rK~~ll~~~i~~lk~ke~~l~een~ 103 (112)
.-|+.++.- |. |-+-+...+...+++...|+++|-
T Consensus 4 e~LeqWv~~-Rk-k~eeler~lrk~kk~iKklEdeNP 38 (50)
T 1a92_A 4 DILEQWVSG-RK-KLEELERDLRKLKKKIKKLEEDNP 38 (50)
T ss_dssp HHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHH-HH-HHHHHHHHHHHHHHHHHhhhccCC
Confidence 345555543 33 333445667777888888888874
No 54
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=20.55 E-value=1.3e+02 Score=18.54 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033742 81 GERLLNEIDALRRKEAQLTEENLRLKQ 107 (112)
Q Consensus 81 ~~ll~~~i~~lk~ke~~l~een~~L~~ 107 (112)
++.+..++..++++...+.++.+.|+.
T Consensus 9 ~~~l~~~~~~l~~~i~~lkeel~~L~~ 35 (109)
T 2wg5_A 9 MKQLEDKVEELLSKNYHLENEVARLRS 35 (109)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345566777777777777777777664
Done!