Query 033745
Match_columns 112
No_of_seqs 134 out of 1567
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 09:22:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2guz_A Mitochondrial import in 99.9 3.9E-23 1.3E-27 128.6 7.6 68 40-107 2-70 (71)
2 2guz_B Mitochondrial import in 99.9 6.5E-23 2.2E-27 126.1 5.8 58 49-106 1-61 (65)
3 1faf_A Large T antigen; J doma 99.8 7.4E-20 2.5E-24 115.9 4.4 63 49-111 8-72 (79)
4 2ys8_A RAB-related GTP-binding 99.7 1.1E-17 3.7E-22 108.1 6.3 60 52-111 27-89 (90)
5 1iur_A KIAA0730 protein; DNAJ 99.7 2.4E-17 8.2E-22 106.5 7.2 63 45-107 9-76 (88)
6 2yua_A Williams-beuren syndrom 99.7 7E-17 2.4E-21 105.7 6.4 65 44-108 9-77 (99)
7 2dn9_A DNAJ homolog subfamily 99.7 6.1E-17 2.1E-21 101.7 5.1 60 49-108 4-67 (79)
8 2ctr_A DNAJ homolog subfamily 99.7 9.2E-17 3.2E-21 103.0 5.3 60 49-108 4-66 (88)
9 2o37_A Protein SIS1; HSP40, J- 99.7 1.3E-16 4.4E-21 103.2 5.7 59 50-108 6-65 (92)
10 2och_A Hypothetical protein DN 99.6 1.9E-16 6.6E-21 98.2 5.9 57 52-108 8-65 (73)
11 2ej7_A HCG3 gene; HCG3 protein 99.6 1.3E-16 4.4E-21 100.8 5.0 58 51-108 8-70 (82)
12 1gh6_A Large T antigen; tumor 99.6 5.2E-17 1.8E-21 109.4 3.1 59 51-109 7-67 (114)
13 2ctp_A DNAJ homolog subfamily 99.6 7.5E-17 2.5E-21 101.1 2.9 60 49-108 4-66 (78)
14 2ctw_A DNAJ homolog subfamily 99.6 3.4E-16 1.2E-20 104.2 5.6 63 46-108 11-77 (109)
15 2dmx_A DNAJ homolog subfamily 99.6 2.5E-16 8.7E-21 101.6 4.6 58 51-108 8-70 (92)
16 2cug_A Mkiaa0962 protein; DNAJ 99.6 4.5E-16 1.5E-20 99.8 5.1 58 51-108 16-76 (88)
17 1hdj_A Human HSP40, HDJ-1; mol 99.6 3.4E-16 1.2E-20 97.8 4.3 56 53-108 4-62 (77)
18 2ctq_A DNAJ homolog subfamily 99.6 6E-16 2E-20 103.4 4.7 60 49-108 17-80 (112)
19 1wjz_A 1700030A21RIK protein; 99.6 1.4E-16 4.9E-21 102.8 1.3 62 47-108 11-82 (94)
20 2l6l_A DNAJ homolog subfamily 99.6 1.3E-15 4.4E-20 106.6 5.3 62 47-108 5-76 (155)
21 2lgw_A DNAJ homolog subfamily 99.6 1.9E-15 6.5E-20 99.2 5.6 56 53-108 3-63 (99)
22 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 2.2E-15 7.4E-20 100.0 3.9 58 51-108 14-79 (109)
23 2pf4_E Small T antigen; PP2A, 99.5 6E-16 2.1E-20 111.0 0.5 58 51-108 10-69 (174)
24 1bq0_A DNAJ, HSP40; chaperone, 99.5 7.9E-16 2.7E-20 101.3 -0.3 56 53-108 4-63 (103)
25 3lz8_A Putative chaperone DNAJ 99.5 5.5E-15 1.9E-19 114.8 0.0 63 46-108 22-87 (329)
26 3apq_A DNAJ homolog subfamily 99.4 4.9E-14 1.7E-18 101.0 4.3 56 53-108 3-62 (210)
27 2qwo_B Putative tyrosine-prote 99.4 1.5E-14 5.2E-19 94.1 1.0 51 53-103 34-91 (92)
28 1fpo_A HSC20, chaperone protei 99.4 5.9E-14 2E-18 100.1 4.0 56 53-108 2-68 (171)
29 3hho_A CO-chaperone protein HS 99.4 1.3E-13 4.6E-18 98.4 4.2 57 52-108 4-71 (174)
30 3bvo_A CO-chaperone protein HS 99.4 1.8E-13 6.1E-18 100.3 4.0 58 51-108 42-110 (207)
31 1n4c_A Auxilin; four helix bun 99.4 1E-13 3.5E-18 100.1 0.9 57 52-108 117-180 (182)
32 3ag7_A Putative uncharacterize 99.3 1.2E-13 4E-18 91.8 -0.1 53 52-105 41-104 (106)
33 3uo3_A J-type CO-chaperone JAC 99.2 1.7E-12 5.8E-17 93.4 0.9 57 52-108 11-75 (181)
34 3apo_A DNAJ homolog subfamily 99.1 5.6E-12 1.9E-16 105.1 -0.5 60 49-108 18-81 (780)
35 2y4t_A DNAJ homolog subfamily 98.3 3.6E-07 1.2E-11 68.8 4.5 56 53-108 383-445 (450)
36 1ug2_A 2610100B20RIK gene prod 54.7 7 0.00024 24.8 2.0 21 64-84 68-88 (95)
37 2lr8_A CAsp8-associated protei 52.4 4.1 0.00014 24.5 0.0 21 64-84 48-68 (70)
38 1qqr_A Streptokinase domain B; 45.0 12 0.00041 25.3 2.1 29 55-83 35-63 (138)
39 4aj5_K Spindle and kinetochore 42.3 30 0.001 22.9 3.7 40 64-103 19-64 (123)
40 2pzi_A Probable serine/threoni 42.2 6.3 0.00022 32.0 0.4 43 54-100 631-675 (681)
41 2zfd_A Calcineurin B-like prot 41.8 78 0.0027 21.3 6.5 53 44-96 134-193 (226)
42 2ehb_A Calcineurin B-like prot 40.6 75 0.0026 20.8 5.8 52 46-97 125-183 (207)
43 2i8b_A Minor nucleoprotein VP3 40.0 14 0.00048 24.9 1.8 19 67-89 85-103 (152)
44 2ket_A Cathelicidin-6; antimic 38.4 34 0.0012 16.3 2.6 17 67-83 4-20 (27)
45 1q90_G Cytochrome B6F complex 36.1 49 0.0017 17.3 3.6 30 1-30 1-31 (37)
46 2ct9_A Calcium-binding protein 29.7 1.2E+02 0.0041 19.9 5.4 49 44-92 125-177 (208)
47 3ll8_B Calcineurin subunit B t 29.7 97 0.0033 18.8 5.5 50 45-94 88-141 (155)
48 1tzy_B Histone H2B; histone-fo 29.3 57 0.002 21.6 3.4 17 72-88 41-57 (126)
49 2ast_A S-phase kinase-associat 29.0 61 0.0021 21.4 3.7 22 49-70 129-150 (159)
50 2nqb_D Histone H2B; nucleosome 28.7 59 0.002 21.4 3.4 17 72-88 38-54 (123)
51 2p1m_A SKP1-like protein 1A; F 26.2 1E+02 0.0035 20.4 4.4 23 47-69 126-148 (160)
52 1bh9_B TAFII28; histone fold, 26.0 65 0.0022 19.8 3.1 19 62-80 68-86 (89)
53 3v7d_A Suppressor of kinetocho 25.5 62 0.0021 21.9 3.2 23 48-70 135-157 (169)
54 2lxi_A RNA-binding protein 10; 24.8 59 0.002 19.0 2.8 20 58-77 7-26 (91)
55 1yx7_A Calsensin, LAN3-6 antig 24.8 93 0.0032 17.0 4.7 47 46-92 21-72 (83)
56 1xsv_A Hypothetical UPF0122 pr 24.7 59 0.002 20.3 2.8 56 46-103 39-94 (113)
57 2aze_C Retinoblastoma-associat 24.3 36 0.0012 18.5 1.4 22 86-107 12-33 (46)
58 2cqq_A RSGI RUH-037, DNAJ homo 24.1 61 0.0021 19.0 2.6 22 64-85 43-64 (72)
59 2lv7_A Calcium-binding protein 23.4 1.3E+02 0.0043 18.0 6.4 25 52-76 39-65 (100)
60 3v7o_A Minor nucleoprotein VP3 22.3 43 0.0015 24.4 1.9 19 67-89 160-178 (227)
61 1iqt_A AUF1, heterogeneous nuc 22.0 78 0.0027 17.2 2.8 19 58-76 5-23 (75)
62 1vf5_G Protein PET G; photosyn 21.6 39 0.0013 17.7 1.2 30 1-30 1-31 (37)
63 2jpc_A SSRB; DNA binding prote 21.6 34 0.0012 18.3 1.1 29 48-80 13-41 (61)
64 1ckt_A High mobility group 1 p 20.7 1.2E+02 0.0041 16.7 3.7 35 72-106 15-50 (71)
No 1
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.9e-23 Score=128.59 Aligned_cols=68 Identities=51% Similarity=0.869 Sum_probs=64.5
Q ss_pred hhhCCCCCCCCHHHHHHHhCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccC
Q 033745 40 FYEGGFQPVMTRREAALILGVRE-STPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 40 ~~~~~~~~~m~~~ea~~iLgl~~-~~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr 107 (112)
|+.+++...|+.+++|+||||++ +++.++|+++||+|++++|||++|+++.|++|++||++|.++..|
T Consensus 2 ~~~g~~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 2 FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCCSCCCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred CcCCCCCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence 67789999999999999999999 799999999999999999999999999999999999999987655
No 2
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.5e-23 Score=126.11 Aligned_cols=58 Identities=29% Similarity=0.420 Sum_probs=55.3
Q ss_pred CCHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhccccc
Q 033745 49 MTRREAALILGVRES---TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTK 106 (112)
Q Consensus 49 m~~~ea~~iLgl~~~---~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~k 106 (112)
||.+||++||||+++ ++.++|+++||+|+..||||+|||+|++++||+|+++|..+.+
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~~~ 61 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWELA 61 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999 8999999999999999999999999999999999999987643
No 3
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.78 E-value=7.4e-20 Score=115.92 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=58.3
Q ss_pred CCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCCCCC
Q 033745 49 MTRREAALILGVRES--TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSA 111 (112)
Q Consensus 49 m~~~ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~~~~ 111 (112)
.+..++|+||||+++ ++.++||++||+|++++|||++|+.+.|++|++||++|.++.+|..+-
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 345789999999999 999999999999999999999999999999999999999988887653
No 4
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=108.08 Aligned_cols=60 Identities=27% Similarity=0.424 Sum_probs=55.5
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHhcccccCCCCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAG---GSHYLASKINEAKDIMLRRTKGSNSA 111 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~---gs~~~~~~i~~Ay~~L~~~~kr~~~~ 111 (112)
.++|+||||+++++.++||++|++|++++|||++ +..+.|++|++||++|.++.+|+.+.
T Consensus 27 ~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~~~ 89 (90)
T 2ys8_A 27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGPSS 89 (90)
T ss_dssp SSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccCCC
Confidence 5689999999999999999999999999999997 45789999999999999999998763
No 5
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=2.4e-17 Score=106.45 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=56.5
Q ss_pred CCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccC
Q 033745 45 FQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 45 ~~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr 107 (112)
...+++..++|+||||+++++.+|||++||+|++++|||++++ .+.|++|++||++|.+...|
T Consensus 9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 3456788999999999999999999999999999999999875 47899999999999986643
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=7e-17 Score=105.74 Aligned_cols=65 Identities=20% Similarity=0.168 Sum_probs=58.4
Q ss_pred CCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 44 GFQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 44 ~~~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.....|+..++|+||||+++++.++||++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 9 ~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 77 (99)
T 2yua_A 9 QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRR 77 (99)
T ss_dssp CCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHH
T ss_pred CCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 34567888999999999999999999999999999999999864 579999999999999988763
No 7
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=6.1e-17 Score=101.66 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=53.9
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++..++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 67 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 445678999999999999999999999999999999864 588999999999999988764
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=9.2e-17 Score=103.04 Aligned_cols=60 Identities=23% Similarity=0.290 Sum_probs=53.9
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++..++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHH
Confidence 344678999999999999999999999999999999886 478999999999999987763
No 9
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.3e-16 Score=103.21 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=54.3
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG-GSHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~-gs~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...++|+||||+++++.++|+++|++|++++|||++ ++.+.|++|++||++|.++.+|.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKRE 65 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHH
Confidence 346899999999999999999999999999999997 67899999999999999988763
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.65 E-value=1.9e-16 Score=98.15 Aligned_cols=57 Identities=21% Similarity=0.317 Sum_probs=52.7
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 8 ~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (73)
T 2och_A 8 TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQ 65 (73)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHH
Confidence 468999999999999999999999999999999764 799999999999999988764
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=100.81 Aligned_cols=58 Identities=21% Similarity=0.291 Sum_probs=52.6
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-----~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++|+||||+++++.++|+++|++|++++|||++++. +.|++|++||++|.++.+|.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 45789999999999999999999999999999998752 58999999999999988763
No 12
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.64 E-value=5.2e-17 Score=109.38 Aligned_cols=59 Identities=22% Similarity=0.200 Sum_probs=55.9
Q ss_pred HHHHHHHhCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCCC
Q 033745 51 RREAALILGVRESTPT--EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSN 109 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~--~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~~ 109 (112)
..++|+||||+++++. ++||++||+|++++|||++++.+.|++|++||++|.++.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHH
Confidence 4678999999999988 9999999999999999999999999999999999999999985
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=7.5e-17 Score=101.11 Aligned_cols=60 Identities=25% Similarity=0.291 Sum_probs=54.0
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++..++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 455679999999999999999999999999999999854 578999999999999988763
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=3.4e-16 Score=104.19 Aligned_cols=63 Identities=21% Similarity=0.328 Sum_probs=56.0
Q ss_pred CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 46 QPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 46 ~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...++..++|+||||+++++.++||++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 77 (109)
T 2ctw_A 11 SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77 (109)
T ss_dssp CTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred ccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 344556789999999999999999999999999999999874 578999999999999988764
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.5e-16 Score=101.57 Aligned_cols=58 Identities=26% Similarity=0.339 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 3578999999999999999999999999999999864 368999999999999987763
No 16
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=4.5e-16 Score=99.82 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=52.8
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g---s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++|+||||+++++.++|+++|++|++++|||+++ ..+.|++|++||++|.++.+|.
T Consensus 16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 76 (88)
T 2cug_A 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRT 76 (88)
T ss_dssp SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHH
Confidence 457899999999999999999999999999999976 3588999999999999988763
No 17
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.61 E-value=3.4e-16 Score=97.83 Aligned_cols=56 Identities=27% Similarity=0.344 Sum_probs=51.2
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++|+||||+++++.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 4 ~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 62 (77)
T 1hdj_A 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp CSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 46999999999999999999999999999999753 589999999999999987763
No 18
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=6e-16 Score=103.37 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=54.4
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+...++|+||||+++++.++||++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 80 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 345789999999999999999999999999999999874 689999999999999988764
No 19
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.59 E-value=1.4e-16 Score=102.84 Aligned_cols=62 Identities=18% Similarity=0.232 Sum_probs=55.3
Q ss_pred CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC----------CHHHHHHHHHHHHHhcccccCC
Q 033745 47 PVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG----------SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 47 ~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g----------s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..|+..++|+||||+++++.++||++|++|++++|||+++ ..+.|++|++||++|.++.+|.
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 82 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK 82 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4466788999999999999999999999999999999964 2378999999999999998774
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.58 E-value=1.3e-15 Score=106.57 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHhcccccCC
Q 033745 47 PVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 47 ~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..|+..++|+||||+++++.++||++|++|++++|||++++ .+.+++|++||++|.++.+|+
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~ 76 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKR 76 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHC
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34566789999999999999999999999999999999653 278999999999999998875
No 21
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.58 E-value=1.9e-15 Score=99.16 Aligned_cols=56 Identities=25% Similarity=0.322 Sum_probs=51.1
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++|+||||+++++.++||++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 3 d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~ 63 (99)
T 2lgw_A 3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63 (99)
T ss_dssp CHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 47999999999999999999999999999999874 368999999999999987763
No 22
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.55 E-value=2.2e-15 Score=99.98 Aligned_cols=58 Identities=17% Similarity=0.154 Sum_probs=53.0
Q ss_pred HHHHHHHhCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVREST-PTEKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~-~~~eik~~yr~l~~~~HPDk~gs-------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++|+||||++++ +.++|+++|++|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~ 79 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT 79 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 35789999999998 99999999999999999999876 478999999999999998774
No 23
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.54 E-value=6e-16 Score=111.02 Aligned_cols=58 Identities=22% Similarity=0.200 Sum_probs=51.5
Q ss_pred HHHHHHHhCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTP--TEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~--~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++|+||||+++++ .++||++||+|++++|||++++.+.+++|++||++|.++.+|+
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~ 69 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYA 69 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHH
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHH
Confidence 468999999999987 6999999999999999999999999999999999999998875
No 24
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.52 E-value=7.9e-16 Score=101.26 Aligned_cols=56 Identities=23% Similarity=0.385 Sum_probs=50.9
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++|+||||+++++.++||++|++|++++|||++++ .+.+++|++||++|.++.+|.
T Consensus 4 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 63 (103)
T 1bq0_A 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63 (103)
T ss_dssp CSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHH
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 46899999999999999999999999999999764 478999999999999987763
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.46 E-value=5.5e-15 Score=114.81 Aligned_cols=63 Identities=22% Similarity=0.323 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 46 QPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 46 ~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...|+..++|+||||+++++.+|||++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 87 (329)
T 3lz8_A 22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRA 87 (329)
T ss_dssp ------------------------------------------------------------------
T ss_pred cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhc
Confidence 455788999999999999999999999999999999999764 578999999999999998885
No 26
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.44 E-value=4.9e-14 Score=101.00 Aligned_cols=56 Identities=21% Similarity=0.352 Sum_probs=51.1
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++|+||||+++++.++||++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 3 ~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~ 62 (210)
T 3apq_A 3 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62 (210)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHH
Confidence 57999999999999999999999999999999752 478999999999999988764
No 27
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.44 E-value=1.5e-14 Score=94.09 Aligned_cols=51 Identities=18% Similarity=0.241 Sum_probs=45.8
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhcc
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDIMLR 103 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-------~~~~~~i~~Ay~~L~~ 103 (112)
..|++||++..++.++||++||++++++|||++++ .+.|+.|++||++|.+
T Consensus 34 ~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 34899999999999999999999999999999643 3579999999999975
No 28
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.43 E-value=5.9e-14 Score=100.10 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=50.1
Q ss_pred HHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCC--H-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVREST--PTEKVKEAHRRVMVANHPDAGGS--H-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~--~~~eik~~yr~l~~~~HPDk~gs--~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|+||||++++ |.++|+++|++|.+++|||++++ . +.|+.||+||++|.++.+|+
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 68 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 579999999987 99999999999999999999653 2 57999999999999998874
No 29
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.40 E-value=1.3e-13 Score=98.42 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=50.0
Q ss_pred HHHHHHhCCCCCCC--HHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTP--TEKVKEAHRRVMVANHPDAGGS---------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~--~~eik~~yr~l~~~~HPDk~gs---------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++ .++|+++|++|.+++|||++++ .+.|.+||+||++|.++.+|+
T Consensus 4 ~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 71 (174)
T 3hho_A 4 MNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRA 71 (174)
T ss_dssp CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 35799999999866 9999999999999999999652 267899999999999998874
No 30
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.39 E-value=1.8e-13 Score=100.32 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=50.7
Q ss_pred HHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCC--H-------HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRES--TPTEKVKEAHRRVMVANHPDAGGS--H-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~gs--~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|+||||+++ ++.++|+++||+|.+++|||++++ . +.|++||+||++|.++.+|+
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4578999999986 799999999999999999999652 1 46789999999999998874
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.35 E-value=1e-13 Score=100.05 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=51.7
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++.|++|||++.++.++||++||+|++++|||++++ .+.|++|++||++|.++.+|.
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~ 180 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP 180 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhh
Confidence 468999999999999999999999999999999542 368999999999999999886
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.32 E-value=1.2e-13 Score=91.82 Aligned_cols=53 Identities=17% Similarity=0.092 Sum_probs=46.5
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC----C-------HHHHHHHHHHHHHhcccc
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGG----S-------HYLASKINEAKDIMLRRT 105 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g----s-------~~~~~~i~~Ay~~L~~~~ 105 (112)
.++|+|||++. ++.++||++||+|++++||||++ + .+.|++|++||++|.++.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 46789999986 99999999999999999999943 3 478999999999999864
No 33
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.21 E-value=1.7e-12 Score=93.36 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=50.7
Q ss_pred HHHHHHh------CCCC-CCCHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALIL------GVRE-STPTEKVKEAHRRVMVANHPDAGG-SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iL------gl~~-~~~~~eik~~yr~l~~~~HPDk~g-s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+|| |+++ +++.++|+++||+|.+++|||+++ +.+.|++||+||++|.++.+|+
T Consensus 11 ~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~ 75 (181)
T 3uo3_A 11 STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRS 75 (181)
T ss_dssp CCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHH
T ss_pred CCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHH
Confidence 4679999 4665 799999999999999999999977 6788999999999999998874
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.11 E-value=5.6e-12 Score=105.10 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=34.4
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
....+.|+||||+++++.++||++||+|++++|||++++ .+.+++|++||++|.++.+|+
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~ 81 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHH
Confidence 345789999999999999999999999999999999752 468999999999999988774
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.35 E-value=3.6e-07 Score=68.84 Aligned_cols=56 Identities=21% Similarity=0.285 Sum_probs=49.3
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.+++||+....+.+++++.|+++.+++|||+.+++ ..+++|++||++|.++.+|.
T Consensus 383 ~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~ 445 (450)
T 2y4t_A 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRK 445 (450)
T ss_dssp CSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-
T ss_pred hHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 347788899989999999999999999999998765 38899999999999999986
No 36
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=54.69 E-value=7 Score=24.83 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDA 84 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk 84 (112)
-+.++|+.||+.|++.+|-.+
T Consensus 68 ks~nqV~~RFq~Lm~Lf~~~~ 88 (95)
T 1ug2_A 68 KTPVEVSHRFRELMQLFHTAC 88 (95)
T ss_dssp CCHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999998654
No 37
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=52.44 E-value=4.1 Score=24.52 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDA 84 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk 84 (112)
-++++|..+|+.|+..+|-.|
T Consensus 48 ks~~QV~~RF~~Lm~Lf~kSk 68 (70)
T 2lr8_A 48 KNPNQVSERFQQLMKLFEKSK 68 (70)
Confidence 578999999999999998655
No 38
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=45.02 E-value=12 Score=25.29 Aligned_cols=29 Identities=14% Similarity=0.365 Sum_probs=25.7
Q ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHhCCC
Q 033745 55 ALILGVRESTPTEKVKEAHRRVMVANHPD 83 (112)
Q Consensus 55 ~~iLgl~~~~~~~eik~~yr~l~~~~HPD 83 (112)
+..+-+...++.+|++++=..++.+.|||
T Consensus 35 l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 35 LKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp EEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred hcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 55667777799999999999999999997
No 39
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=42.31 E-value=30 Score=22.92 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCC--CH----HHHHHHHHHHHHhcc
Q 033745 64 TPTEKVKEAHRRVMVANHPDAGG--SH----YLASKINEAKDIMLR 103 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk~g--s~----~~~~~i~~Ay~~L~~ 103 (112)
.|.+-|..+-..=++.+|||.-| +| +..++|.+=|..|+.
T Consensus 19 sDLdyiq~RLe~Ef~~~~Pd~A~e~NPv~Ll~~LsaIk~ry~~L~~ 64 (123)
T 4aj5_K 19 SDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYA 64 (123)
T ss_dssp HHHHHHHHHHHHHHHHCC-----CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCccccccChHHHHHHHHHHHHHHHHHHH
Confidence 46677888888999999999843 44 455666676766654
No 40
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=42.19 E-value=6.3 Score=32.00 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=30.7
Q ss_pred HHHHhCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 033745 54 AALILGVRESTPT--EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDI 100 (112)
Q Consensus 54 a~~iLgl~~~~~~--~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~ 100 (112)
++++||++-+... .+|+++||+|++..+++ .++..-|..|+.+
T Consensus 631 ~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 631 TNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----RHRYTLVDMANKV 675 (681)
T ss_dssp SSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----HHHHHHHHHHHHH
T ss_pred CcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----HHHHHHHHHhccc
Confidence 5578888655333 66999999999976544 4677777777765
No 41
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=41.84 E-value=78 Score=21.32 Aligned_cols=53 Identities=8% Similarity=0.046 Sum_probs=35.6
Q ss_pred CCCCCCCHHHHHHHh-----CCCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHH
Q 033745 44 GFQPVMTRREAALIL-----GVRESTPTEKVKEAHRRVMVANHPDAGG--SHYLASKINE 96 (112)
Q Consensus 44 ~~~~~m~~~ea~~iL-----gl~~~~~~~eik~~yr~l~~~~HPDk~g--s~~~~~~i~~ 96 (112)
.-...++.+|-..+| .+....+.+++....++++....+|..| +.+.+..+..
T Consensus 134 d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~ 193 (226)
T 2zfd_A 134 KQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193 (226)
T ss_dssp TSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 345566777777766 3455667777777778888888888766 5655555443
No 42
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=40.56 E-value=75 Score=20.77 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=29.6
Q ss_pred CCCCCHHHHHHHh-----CCCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHH
Q 033745 46 QPVMTRREAALIL-----GVRESTPTEKVKEAHRRVMVANHPDAGG--SHYLASKINEA 97 (112)
Q Consensus 46 ~~~m~~~ea~~iL-----gl~~~~~~~eik~~yr~l~~~~HPDk~g--s~~~~~~i~~A 97 (112)
...++.+|...+| .+....+.+++....+.++....+|..| +.+.+..+...
T Consensus 125 ~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 125 TGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183 (207)
T ss_dssp CSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3445555555555 2234455666666666666778777766 55555554433
No 43
>2i8b_A Minor nucleoprotein VP30; VP30 ebola virus protein, transcription, RNA binding, viral; HET: MSE; 2.00A {Zaire ebolavirus}
Probab=40.00 E-value=14 Score=24.87 Aligned_cols=19 Identities=47% Similarity=0.651 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCHH
Q 033745 67 EKVKEAHRRVMVANHPDAGGSHY 89 (112)
Q Consensus 67 ~eik~~yr~l~~~~HPDk~gs~~ 89 (112)
+-|++.|.++ |.||||++|
T Consensus 85 ~~vlevYqrl----HsDKGG~FE 103 (152)
T 2i8b_A 85 EPVLEVYQRL----HSDKGGSFE 103 (152)
T ss_dssp HHHHHHHHHH----HTCSSSHHH
T ss_pred hHHHHHHHHH----hcccCccHH
Confidence 5578888876 889999885
No 44
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=38.36 E-value=34 Score=16.27 Aligned_cols=17 Identities=6% Similarity=0.307 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHhCCC
Q 033745 67 EKVKEAHRRVMVANHPD 83 (112)
Q Consensus 67 ~eik~~yr~l~~~~HPD 83 (112)
...++.|++|+++..|-
T Consensus 4 krfrkkfkklfkklspv 20 (27)
T 2ket_A 4 KRFRKKFKKLFKKLSPV 20 (27)
T ss_dssp HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCcc
Confidence 45688899999988874
No 45
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=36.08 E-value=49 Score=17.30 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=18.8
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Q 033745 1 MVAPLIAGMAVAAAAY-AGKYGIRAWQAFKA 30 (112)
Q Consensus 1 m~~~~~~~l~~~~~~~-~~r~~~~A~~~~~~ 30 (112)
|+-|++.|+++..-.+ +.-.|+-||.|+..
T Consensus 1 MvE~lL~GIVlGlipvtlaGLfv~Ay~QyrR 31 (37)
T 1q90_G 1 MVEPLLCGIVLGLVPVTIAGLFVTAYLQYLR 31 (37)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCchhhhhHHHhhHHHHHHHHHHHHHHHHhh
Confidence 7778888877554333 23456778888754
No 46
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=29.73 E-value=1.2e+02 Score=19.88 Aligned_cols=49 Identities=16% Similarity=0.139 Sum_probs=29.8
Q ss_pred CCCCCCCHHHHHHHhC--CCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHH
Q 033745 44 GFQPVMTRREAALILG--VRESTPTEKVKEAHRRVMVANHPDAGG--SHYLAS 92 (112)
Q Consensus 44 ~~~~~m~~~ea~~iLg--l~~~~~~~eik~~yr~l~~~~HPDk~g--s~~~~~ 92 (112)
.-+..++.+|...+|. +....+.++++.-...++....+|..| +.+.|.
T Consensus 125 d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~ 177 (208)
T 2ct9_A 125 DKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177 (208)
T ss_dssp TCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHH
T ss_pred CCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 3344566666666654 244566777777666678888777765 444443
No 47
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=29.70 E-value=97 Score=18.79 Aligned_cols=50 Identities=10% Similarity=0.155 Sum_probs=29.7
Q ss_pred CCCCCCHHHHHHHhCC--CCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHHHH
Q 033745 45 FQPVMTRREAALILGV--RESTPTEKVKEAHRRVMVANHPDAGG--SHYLASKI 94 (112)
Q Consensus 45 ~~~~m~~~ea~~iLgl--~~~~~~~eik~~yr~l~~~~HPDk~g--s~~~~~~i 94 (112)
-...++.+|...+|.- ....+.+++...++.++....+|..| +.+.|..+
T Consensus 88 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~ 141 (155)
T 3ll8_B 88 KDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 141 (155)
T ss_dssp CSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 3445666666555532 33456667777777766667777765 45555444
No 48
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=29.25 E-value=57 Score=21.60 Aligned_cols=17 Identities=35% Similarity=0.428 Sum_probs=12.9
Q ss_pred HHHHHHHHhCCCCCCCH
Q 033745 72 AHRRVMVANHPDAGGSH 88 (112)
Q Consensus 72 ~yr~l~~~~HPDk~gs~ 88 (112)
-..+.+++.|||.+-|.
T Consensus 41 YIyKVLKQVhpd~gISs 57 (126)
T 1tzy_B 41 YVYKVLKQVHPDTGISS 57 (126)
T ss_dssp HHHHHHHHHCTTCEECH
T ss_pred HHHHHHHHhCCCCCcCH
Confidence 45678889999987554
No 49
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=29.03 E-value=61 Score=21.44 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=18.0
Q ss_pred CCHHHHHHHhCCCCCCCHHHHH
Q 033745 49 MTRREAALILGVRESTPTEKVK 70 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik 70 (112)
.|.+|-+++||+..+.+++|-.
T Consensus 129 kt~eeir~~f~I~~d~t~eEe~ 150 (159)
T 2ast_A 129 KTPEEIRKTFNIKNDFTEEEEA 150 (159)
T ss_dssp CCHHHHHHHTTCCCCSCTTHHH
T ss_pred CCHHHHHHHcCCCCCCCHHHHH
Confidence 6889999999999887766543
No 50
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=28.65 E-value=59 Score=21.44 Aligned_cols=17 Identities=35% Similarity=0.368 Sum_probs=12.8
Q ss_pred HHHHHHHHhCCCCCCCH
Q 033745 72 AHRRVMVANHPDAGGSH 88 (112)
Q Consensus 72 ~yr~l~~~~HPDk~gs~ 88 (112)
--.+.+++.|||.+-|.
T Consensus 38 YIyKVLKQVhpd~gISs 54 (123)
T 2nqb_D 38 YIYTVLKQVHPDTGISS 54 (123)
T ss_dssp HHHHHHHHHCTTCEECH
T ss_pred HHHHHHHHhCCCCCcCH
Confidence 45678889999987554
No 51
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=26.17 E-value=1e+02 Score=20.41 Aligned_cols=23 Identities=13% Similarity=0.111 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHhCCCCCCCHHHH
Q 033745 47 PVMTRREAALILGVRESTPTEKV 69 (112)
Q Consensus 47 ~~m~~~ea~~iLgl~~~~~~~ei 69 (112)
...|.+|-+++||+..+.|++|-
T Consensus 126 kgkt~eeir~~f~I~nd~t~eEe 148 (160)
T 2p1m_A 126 KGKTPEEIRTTFNIKNDFTPEEE 148 (160)
T ss_dssp TTCCHHHHHHHTTCCCCCCHHHH
T ss_pred cCCCHHHHHHHcCCCCCCCHHHH
Confidence 34688999999999998887664
No 52
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=25.99 E-value=65 Score=19.83 Aligned_cols=19 Identities=21% Similarity=0.307 Sum_probs=15.1
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 033745 62 ESTPTEKVKEAHRRVMVAN 80 (112)
Q Consensus 62 ~~~~~~eik~~yr~l~~~~ 80 (112)
..+.+..|+++||+|-..-
T Consensus 68 ~Pl~P~HireA~rrl~~~g 86 (89)
T 1bh9_B 68 PPLQPKHMREAVRRLKSKG 86 (89)
T ss_dssp SSCCHHHHHHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHHHHcC
Confidence 3478899999999987643
No 53
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=25.53 E-value=62 Score=21.89 Aligned_cols=23 Identities=9% Similarity=0.014 Sum_probs=18.8
Q ss_pred CCCHHHHHHHhCCCCCCCHHHHH
Q 033745 48 VMTRREAALILGVRESTPTEKVK 70 (112)
Q Consensus 48 ~m~~~ea~~iLgl~~~~~~~eik 70 (112)
..|.+|-+++||+..+.|++|-.
T Consensus 135 gktpeeiR~~f~I~nd~t~eEe~ 157 (169)
T 3v7d_A 135 GRSPEEIRRTFNIVNDFTPEEEA 157 (169)
T ss_dssp TCCHHHHHHHHTCCCCCCHHHHH
T ss_pred CCCHHHHHHHcCCCCCCCHHHHH
Confidence 34789999999999998887643
No 54
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=24.80 E-value=59 Score=18.99 Aligned_cols=20 Identities=0% Similarity=0.011 Sum_probs=16.9
Q ss_pred hCCCCCCCHHHHHHHHHHHH
Q 033745 58 LGVRESTPTEKVKEAHRRVM 77 (112)
Q Consensus 58 Lgl~~~~~~~eik~~yr~l~ 77 (112)
=||+++++.++|++.|...-
T Consensus 7 ~nLp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 7 RMLPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp ETCCSSCCHHHHHHHHHHHT
T ss_pred eCCCCCCCHHHHHHHHHHhC
Confidence 38889999999999888764
No 55
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=24.79 E-value=93 Score=16.98 Aligned_cols=47 Identities=21% Similarity=0.203 Sum_probs=28.7
Q ss_pred CCCCCHHHHHH---HhCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHH
Q 033745 46 QPVMTRREAAL---ILGVRESTPTEKVKEAHRRVMVANHPDAGG--SHYLAS 92 (112)
Q Consensus 46 ~~~m~~~ea~~---iLgl~~~~~~~eik~~yr~l~~~~HPDk~g--s~~~~~ 92 (112)
...++.+|-.. .+|.....+.++++.....++....+|..| +.+.|.
T Consensus 21 ~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~ 72 (83)
T 1yx7_A 21 DGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFL 72 (83)
T ss_dssp SSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHH
T ss_pred CCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 44556555444 445323456677777777788888777766 555554
No 56
>1xsv_A Hypothetical UPF0122 protein SAV1236; helix-turn-helix, putative DNA-binding protein, signal recognition particle, unknown function; 1.70A {Staphylococcus aureus subsp} SCOP: a.4.13.3
Probab=24.73 E-value=59 Score=20.30 Aligned_cols=56 Identities=13% Similarity=-0.046 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcc
Q 033745 46 QPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLR 103 (112)
Q Consensus 46 ~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~ 103 (112)
-..++..|--+.||++.+.-...+.++.++|-.... +.+-...+.++...++-|..
T Consensus 39 ~~g~s~~EIA~~lgiS~~tV~~~l~ra~~kLr~~l~--~~~~~~~~~~~~~~~~~~~~ 94 (113)
T 1xsv_A 39 LEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEK--KLELYQKFEQRREIYDEMKQ 94 (113)
T ss_dssp TSCCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHTT
T ss_pred HcCCCHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHH--HHhHHhHHHHHHHHHHHHHH
Confidence 456899999999999877555555555555544431 12445677777777776653
No 57
>2aze_C Retinoblastoma-associated protein; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: j.119.1.1
Probab=24.34 E-value=36 Score=18.52 Aligned_cols=22 Identities=27% Similarity=0.055 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHhcccccC
Q 033745 86 GSHYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 86 gs~~~~~~i~~Ay~~L~~~~kr 107 (112)
|..++|++||+--.--....||
T Consensus 12 g~~~rFQKINqMvnss~r~~KR 33 (46)
T 2aze_C 12 GTSEKFQKINQMVCNSDRVLKR 33 (46)
T ss_dssp THHHHHHHHHHHHHCCTTCCCC
T ss_pred CchHHHHHHHHHHhhhhHhhhh
Confidence 5668999999865543444444
No 58
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=24.05 E-value=61 Score=19.01 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDAG 85 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk~ 85 (112)
-|.++|+++|+.|......+.|
T Consensus 43 Rt~~eV~~~y~~L~~d~~~~~G 64 (72)
T 2cqq_A 43 RSVTDVTTKAKQLKDSVTCSPG 64 (72)
T ss_dssp SCHHHHHHHHHHHHHSCCCCSC
T ss_pred CCHHHHHHHHHHHHHhcCccCC
Confidence 5899999999999887665533
No 59
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=23.42 E-value=1.3e+02 Score=18.01 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=14.1
Q ss_pred HHHHHHhCCCCC--CCHHHHHHHHHHH
Q 033745 52 REAALILGVRES--TPTEKVKEAHRRV 76 (112)
Q Consensus 52 ~ea~~iLgl~~~--~~~~eik~~yr~l 76 (112)
.++++.+..+.+ ++.+|++...+.+
T Consensus 39 ~~~F~~~D~d~~G~I~~~El~~~l~~l 65 (100)
T 2lv7_A 39 REAFKVFDRDGNGFISKQELGTAMRSL 65 (100)
T ss_dssp HHHHHHTCSSCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHHHHh
Confidence 455566655544 5666666655543
No 60
>3v7o_A Minor nucleoprotein VP30; ssgcid, seattle structural genomics center for infectious disease, SMT, transcription; 2.25A {Reston ebolavirus}
Probab=22.32 E-value=43 Score=24.42 Aligned_cols=19 Identities=37% Similarity=0.625 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCHH
Q 033745 67 EKVKEAHRRVMVANHPDAGGSHY 89 (112)
Q Consensus 67 ~eik~~yr~l~~~~HPDk~gs~~ 89 (112)
+-|.+.|.+| |.||||.+|
T Consensus 160 ~~~~~~y~~~----h~dkgg~fe 178 (227)
T 3v7o_A 160 DSVLEVYQRL----HSDKGGNFE 178 (227)
T ss_dssp HHHHHHHHHH----HTCCTTHHH
T ss_pred hHHHHHHHHH----hccCCccHH
Confidence 5577888776 899999885
No 61
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=22.03 E-value=78 Score=17.20 Aligned_cols=19 Identities=32% Similarity=0.454 Sum_probs=15.8
Q ss_pred hCCCCCCCHHHHHHHHHHH
Q 033745 58 LGVRESTPTEKVKEAHRRV 76 (112)
Q Consensus 58 Lgl~~~~~~~eik~~yr~l 76 (112)
=||+++++.++|++.|.+.
T Consensus 5 ~nLp~~~t~~~l~~~F~~~ 23 (75)
T 1iqt_A 5 GGLSPDTPEEKIREYFGGF 23 (75)
T ss_dssp SCCCSSCCHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHhc
Confidence 3788889999999888875
No 62
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=21.62 E-value=39 Score=17.68 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=12.3
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Q 033745 1 MVAPLIAGMAVAAAAY-AGKYGIRAWQAFKA 30 (112)
Q Consensus 1 m~~~~~~~l~~~~~~~-~~r~~~~A~~~~~~ 30 (112)
|+-|++.|+++..-.+ +.-.|+-||.|+..
T Consensus 1 MvEplL~GIVlGlipvtl~GLfv~Ay~QyrR 31 (37)
T 1vf5_G 1 MVEPLLDGLVLGLVFATLGGLFYAAYQQYKR 31 (37)
T ss_dssp --------CHHHHHHHHHHHHTHHHHHHTCC
T ss_pred CCchhhhhHHHhhHHHHHHHHHHHHHHHHhh
Confidence 6777777766543332 23456778888753
No 63
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=21.62 E-value=34 Score=18.27 Aligned_cols=29 Identities=14% Similarity=0.050 Sum_probs=19.7
Q ss_pred CCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Q 033745 48 VMTRREAALILGVRESTPTEKVKEAHRRVMVAN 80 (112)
Q Consensus 48 ~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~ 80 (112)
.++..|--+.||++ ...|+....++..+.
T Consensus 13 g~s~~eIA~~l~is----~~tV~~~~~~~~~kl 41 (61)
T 2jpc_A 13 GYTNHGISEKLHIS----IKTVETHRMNMMRKL 41 (61)
T ss_dssp SCCSHHHHHHTCSC----HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCCC----HHHHHHHHHHHHHHH
Confidence 45778888999984 555666666665555
No 64
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=20.66 E-value=1.2e+02 Score=16.75 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=23.3
Q ss_pred HHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhccccc
Q 033745 72 AHRRVMVANHPDAGGS-HYLASKINEAKDIMLRRTK 106 (112)
Q Consensus 72 ~yr~l~~~~HPDk~gs-~~~~~~i~~Ay~~L~~~~k 106 (112)
..|.-++.-||+..-+ .++.+.|-+.|.-|.++.+
T Consensus 15 ~~r~~~~~~~p~~~~~~~eisk~lg~~Wk~ls~~eK 50 (71)
T 1ckt_A 15 TCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 50 (71)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHHHHTCCTTTS
T ss_pred HHHHHHHHHCCCCCCcHHHHHHHHHHHHhhCCHHHH
Confidence 3455556678876432 5777778888887776654
Done!