AmiGO: BLAST Results


BLAST match view associations BLAST with AT2G39390 AT2G39390 AT2G39390	protein from Arabidopsis thaliana	2.2e-34
BLAST match view associations BLAST with AT3G55170 AT3G55170 AT3G55170	protein from Arabidopsis thaliana	1.5e-33
BLAST match view associations BLAST with AT3G09500 AT3G09500 AT3G09500	protein from Arabidopsis thaliana	2.0e-33
BLAST match view associations BLAST with Rpl35 Rpl35 Rpl35 ribosomal protein L35	gene from Rattus norvegicus	3.3e-24
BLAST match view associations BLAST with rpl35 rpl35 rpl35 ribosomal protein L35	gene_product from Danio rerio	4.2e-24
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Gallus gallus	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Bos taurus	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Sus scrofa	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Gallus gallus	3.8e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-23
BLAST match view associations BLAST with Bt.62501 Bt.62501 Bt.62501 Uncharacterized protein	protein from Bos taurus	4.8e-23
BLAST match view associations BLAST with LOC686074 LOC686074 LOC686074 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	5.5e-22
BLAST match view associations BLAST with LOC681918 LOC681918 LOC681918 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	5.5e-22
BLAST match view associations BLAST with RGD1563157 RGD1563157 RGD1563157 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	9.0e-22
BLAST match view associations BLAST with F1M6G3 F1M6G3 F1M6G3 Uncharacterized protein	protein from Rattus norvegicus	4.4e-20
BLAST match view associations BLAST with RpL35 RpL35 RpL35 Ribosomal protein L35	protein from Drosophila melanogaster	7.2e-20
BLAST match view associations BLAST with rpl-35 rpl-35 rpl-35	gene from Caenorhabditis elegans	6.5e-19
BLAST match view associations BLAST with F1LUA5 F1LUA5 F1LUA5 Uncharacterized protein	protein from Rattus norvegicus	2.5e-17
BLAST match view associations BLAST with RGD1564550 RGD1564550 RGD1564550 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	3.2e-17
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Ribosomal 60S subunit protein L35A	gene from Saccharomyces cerevisiae	1.3e-15
BLAST match view associations BLAST with RPL35B RPL35B RPL35B Ribosomal 60S subunit protein L35B	gene from Saccharomyces cerevisiae	1.3e-15
BLAST match view associations BLAST with MGG_04455 MGG_04455 MGG_04455 60S ribosomal protein L35	protein from Magnaporthe oryzae 70-15	1.8e-14
BLAST match view associations BLAST with rpl35 rpl35 rpl35 S60 ribosomal protein L35	gene from Dictyostelium discoideum	3.0e-14
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	9.1e-13
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	3.1e-12
BLAST match view associations BLAST with PF11_0260 PF11_0260 PF11_0260 ribosomal protein L35, putative	gene from Plasmodium falciparum	8.2e-12
BLAST match view associations BLAST with PF11_0260 PF11_0260 PF11_0260 60S ribosomal protein L35, putative	protein from Plasmodium falciparum 3D7	8.2e-12

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033748
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039802 - symbol:AT2G39390 species:3702 "Arabi...   373  2.2e-34   1
TAIR|locus:2100686 - symbol:AT3G55170 species:3702 "Arabi...   365  1.5e-33   1
TAIR|locus:2074974 - symbol:AT3G09500 species:3702 "Arabi...   364  2.0e-33   1
RGD|1303007 - symbol:Rpl35 "ribosomal protein L35" specie...   277  3.3e-24   1
ZFIN|ZDB-GENE-020419-2 - symbol:rpl35 "ribosomal protein ...   276  4.2e-24   1
UNIPROTKB|Q98TF7 - symbol:RPL35 "60S ribosomal protein L3...   272  1.1e-23   1
UNIPROTKB|Q3MHM7 - symbol:RPL35 "60S ribosomal protein L3...   272  1.1e-23   1
UNIPROTKB|P42766 - symbol:RPL35 "60S ribosomal protein L3...   272  1.1e-23   1
UNIPROTKB|Q29361 - symbol:RPL35 "60S ribosomal protein L3...   272  1.1e-23   1
UNIPROTKB|F1NYC0 - symbol:RPL35 "60S ribosomal protein L3...   267  3.8e-23   1
UNIPROTKB|E2RPE5 - symbol:RPL35 "Uncharacterized protein"...   267  3.8e-23   1
UNIPROTKB|E1BFM3 - symbol:Bt.62501 "Uncharacterized prote...   266  4.8e-23   1
RGD|1586622 - symbol:LOC686074 "similar to 60S ribosomal ...   256  5.5e-22   1
RGD|1589358 - symbol:LOC681918 "similar to 60S ribosomal ...   256  5.5e-22   1
RGD|1563157 - symbol:RGD1563157 "similar to 60S ribosomal...   254  9.0e-22   1
UNIPROTKB|F1M6G3 - symbol:F1M6G3 "Uncharacterized protein...   238  4.4e-20   1
FB|FBgn0029785 - symbol:RpL35 "Ribosomal protein L35" spe...   236  7.2e-20   1
POMBASE|SPCC613.05c - symbol:rpl35 "60S ribosomal protein...   229  4.0e-19   1
WB|WBGene00004449 - symbol:rpl-35 species:6239 "Caenorhab...   227  6.5e-19   1
ASPGD|ASPL0000059648 - symbol:AN1228 species:162425 "Emer...   226  8.3e-19   1
UNIPROTKB|F1LUA5 - symbol:F1LUA5 "Uncharacterized protein...   212  2.5e-17   1
RGD|1564550 - symbol:RGD1564550 "similar to 60S ribosomal...   211  3.2e-17   1
SGD|S000002350 - symbol:RPL35A "Ribosomal 60S subunit pro...   196  1.3e-15   1
SGD|S000002295 - symbol:RPL35B "Ribosomal 60S subunit pro...   196  1.3e-15   1
UNIPROTKB|G4MSD2 - symbol:MGG_04455 "60S ribosomal protei...   185  1.8e-14   1
DICTYBASE|DDB_G0288349 - symbol:rpl35 "S60 ribosomal prot...   183  3.0e-14   1
RGD|1593195 - symbol:LOC367050 "similar to 60S ribosomal ...   181  4.9e-14   1
UNIPROTKB|F2Z388 - symbol:RPL35 "60S ribosomal protein L3...   169  9.1e-13   1
UNIPROTKB|H0Y3A0 - symbol:RPL35 "60S ribosomal protein L3...   164  3.1e-12   1
GENEDB_PFALCIPARUM|PF11_0260 - symbol:PF11_0260 "ribosoma...   160  8.2e-12   1
UNIPROTKB|Q8IIB4 - symbol:PF11_0260 "60S ribosomal protei...   160  8.2e-12   1


>TAIR|locus:2039802 [details] [associations]
            symbol:AT2G39390 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006412 EMBL:AC004218 GO:GO:0003735
            GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            ProtClustDB:CLSN2683258 EMBL:AY035104 EMBL:AY063036 EMBL:AY084718
            IPI:IPI00526629 PIR:T00549 RefSeq:NP_181471.1 UniGene:At.22434
            ProteinModelPortal:O80626 SMR:O80626 STRING:O80626 PaxDb:O80626
            PRIDE:O80626 EnsemblPlants:AT2G39390.1 GeneID:818524
            KEGG:ath:AT2G39390 GeneFarm:344 TAIR:At2g39390 InParanoid:O80626
            OMA:KKTCAMR PhylomeDB:O80626 Genevestigator:O80626
            GermOnline:AT2G39390 Uniprot:O80626
        Length = 123

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 79/99 (79%), Positives = 81/99 (81%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MARIKVHELR+KSK D               RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct:     1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct:    61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQ 99


>TAIR|locus:2100686 [details] [associations]
            symbol:AT3G55170 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831
            PROSITE:PS00579 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0006412 EMBL:AL132954 GO:GO:0003735 GO:GO:0022625
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            ProtClustDB:CLSN2683258 EMBL:BT006384 IPI:IPI00527437 PIR:T47656
            RefSeq:NP_191077.1 RefSeq:NP_974440.1 UniGene:At.35046
            ProteinModelPortal:Q9M3D2 SMR:Q9M3D2 STRING:Q9M3D2 PaxDb:Q9M3D2
            PRIDE:Q9M3D2 EnsemblPlants:AT3G55170.1 EnsemblPlants:AT3G55170.2
            GeneID:824683 KEGG:ath:AT3G55170 GeneFarm:342 TAIR:At3g55170
            InParanoid:Q9M3D2 OMA:EKNREMY PhylomeDB:Q9M3D2
            Genevestigator:Q9M3D2 GermOnline:AT3G55170 Uniprot:Q9M3D2
        Length = 123

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 78/99 (78%), Positives = 79/99 (79%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MARIKVHELR KSK D               RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct:     1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct:    61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQ 99


>TAIR|locus:2074974 [details] [associations]
            symbol:AT3G09500 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0006412 EMBL:AC016661 GO:GO:0003735 GO:GO:0022625
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            eggNOG:COG0255 EMBL:BT004175 EMBL:BT004938 EMBL:AY086291
            IPI:IPI00532114 RefSeq:NP_187561.1 UniGene:At.40096
            ProteinModelPortal:Q9SF53 SMR:Q9SF53 STRING:Q9SF53 PaxDb:Q9SF53
            PRIDE:Q9SF53 EnsemblPlants:AT3G09500.1 GeneID:820107
            KEGG:ath:AT3G09500 GeneFarm:346 TAIR:At3g09500 HOGENOM:HOG000207749
            InParanoid:Q9SF53 KO:K02918 OMA:LRTKSKE PhylomeDB:Q9SF53
            ProtClustDB:CLSN2683258 Genevestigator:Q9SF53 GermOnline:AT3G09500
            Uniprot:Q9SF53
        Length = 123

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 78/99 (78%), Positives = 80/99 (80%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MARIKVHELR+KSK D               RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct:     1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct:    61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQ 99


>RGD|1303007 [details] [associations]
            symbol:Rpl35 "ribosomal protein L35" species:10116 "Rattus
            norvegicus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            RGD:1303007 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
            OrthoDB:EOG45QHFR EMBL:X51705 EMBL:BC058499 IPI:IPI00212783
            PIR:A34571 RefSeq:NP_997676.1 UniGene:Rn.3458
            ProteinModelPortal:P17078 SMR:P17078 STRING:P17078
            PhosphoSite:P17078 PRIDE:P17078 Ensembl:ENSRNOT00000019162
            GeneID:296709 KEGG:rno:296709 UCSC:RGD:1303007 InParanoid:P17078
            NextBio:641701 Genevestigator:P17078 GermOnline:ENSRNOG00000014272
            Uniprot:P17078
        Length = 123

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 60/99 (60%), Positives = 71/99 (71%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHE 99


>ZFIN|ZDB-GENE-020419-2 [details] [associations]
            symbol:rpl35 "ribosomal protein L35" species:7955
            "Danio rerio" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0051726
            "regulation of cell cycle" evidence=IMP] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            ZFIN:ZDB-GENE-020419-2 GO:GO:0006412 GO:GO:0005840 GO:GO:0009790
            GO:GO:0051726 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
            OrthoDB:EOG45QHFR EMBL:AF506205 EMBL:BC055640 IPI:IPI00494766
            RefSeq:NP_775340.1 UniGene:Dr.119727 ProteinModelPortal:Q8JHJ1
            SMR:Q8JHJ1 STRING:Q8JHJ1 PRIDE:Q8JHJ1 Ensembl:ENSDART00000009241
            GeneID:192299 KEGG:dre:192299 InParanoid:Q8JHJ1 NextBio:20797140
            Bgee:Q8JHJ1 Uniprot:Q8JHJ1
        Length = 123

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 60/99 (60%), Positives = 71/99 (71%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHE 99


>UNIPROTKB|Q98TF7 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
            Pfam:PF00831 PROSITE:PS00579 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
            EMBL:AB046395 IPI:IPI00582832 RefSeq:NP_989604.1 UniGene:Gga.39147
            ProteinModelPortal:Q98TF7 SMR:Q98TF7 STRING:Q98TF7 PRIDE:Q98TF7
            Ensembl:ENSGALT00000001542 GeneID:374133 KEGG:gga:374133
            NextBio:20813648 ArrayExpress:Q98TF7 Uniprot:Q98TF7
        Length = 123

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99


>UNIPROTKB|Q3MHM7 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9913 "Bos
            taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
            Pfam:PF00831 PROSITE:PS00579 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            OMA:LRTKSKE GeneTree:ENSGT00390000016384 EMBL:BC105179
            IPI:IPI00693884 RefSeq:NP_001029667.1 UniGene:Bt.11679
            ProteinModelPortal:Q3MHM7 SMR:Q3MHM7 STRING:Q3MHM7 PRIDE:Q3MHM7
            Ensembl:ENSBTAT00000004161 GeneID:515534 KEGG:bta:515534 CTD:11224
            HOVERGEN:HBG000862 InParanoid:Q3MHM7 OrthoDB:EOG45QHFR
            NextBio:20871870 Uniprot:Q3MHM7
        Length = 123

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99


>UNIPROTKB|P42766 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
            sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
            "structural constituent of ribosome" evidence=NAS] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA] [GO:0003729 "mRNA
            binding" evidence=TAS] [GO:0005730 "nucleolus" evidence=TAS]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
            "translational termination" evidence=TAS] [GO:0006614
            "SRP-dependent cotranslational protein targeting to membrane"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019058 "viral infectious cycle"
            evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
            [GO:0044267 "cellular protein metabolic process" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
            Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413
            GO:GO:0003729 GO:GO:0003735 EMBL:AL354928 GO:GO:0006415
            GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
            GO:GO:0019083 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 KO:K02918 OMA:LRTKSKE CTD:11224
            HOVERGEN:HBG000862 OrthoDB:EOG45QHFR EMBL:U12465 EMBL:CR456877
            EMBL:AK291072 EMBL:BC000348 EMBL:BC010919 EMBL:BC071915
            EMBL:BC094828 EMBL:AB046409 IPI:IPI00412607 PIR:G01477
            RefSeq:NP_009140.1 UniGene:Hs.182825 ProteinModelPortal:P42766
            SMR:P42766 IntAct:P42766 MINT:MINT-5000320 STRING:P42766
            PhosphoSite:P42766 DMDM:1173039 SWISS-2DPAGE:P42766 PaxDb:P42766
            PRIDE:P42766 DNASU:11224 Ensembl:ENST00000348462 GeneID:11224
            KEGG:hsa:11224 UCSC:uc004boy.1 GeneCards:GC09M127620
            HGNC:HGNC:10344 HPA:HPA006047 neXtProt:NX_P42766 PharmGKB:PA34727
            InParanoid:P42766 PhylomeDB:P42766 ChiTaRS:RPL35 GenomeRNAi:11224
            NextBio:42722 ArrayExpress:P42766 Bgee:P42766 CleanEx:HS_RPL35
            Genevestigator:P42766 GermOnline:ENSG00000136942 Uniprot:P42766
        Length = 123

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99


>UNIPROTKB|Q29361 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9823 "Sus
            scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 EMBL:AP009124
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918 OMA:LRTKSKE
            GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
            OrthoDB:EOG45QHFR EMBL:AB055884 EMBL:AY550044 EMBL:DQ629168
            EMBL:F14766 RefSeq:NP_999491.1 UniGene:Ssc.11125
            ProteinModelPortal:Q29361 SMR:Q29361 STRING:Q29361
            Ensembl:ENSSSCT00000006152 GeneID:397598 KEGG:ssc:397598
            Uniprot:Q29361
        Length = 123

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99


>UNIPROTKB|F1NYC0 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012 OMA:LRTKSKE
            GeneTree:ENSGT00390000016384 EMBL:AADN02026322 IPI:IPI00821839
            Ensembl:ENSGALT00000038698 ArrayExpress:F1NYC0 Uniprot:F1NYC0
        Length = 127

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/98 (59%), Positives = 69/98 (70%)

Query:     2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
             A+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct:     6 AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 65

Query:    62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             +Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    66 NQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 103


>UNIPROTKB|E2RPE5 [details] [associations]
            symbol:RPL35 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 OMA:LRTKSKE
            GeneTree:ENSGT00390000016384 EMBL:AAEX03006884
            ProteinModelPortal:E2RPE5 PRIDE:E2RPE5 Ensembl:ENSCAFT00000032194
            NextBio:20855706 Uniprot:E2RPE5
        Length = 123

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/98 (59%), Positives = 69/98 (70%)

Query:     2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
             A+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct:     2 AKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 61

Query:    62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             +Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    62 NQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99


>UNIPROTKB|E1BFM3 [details] [associations]
            symbol:Bt.62501 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
            Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 OMA:EKNREMY GeneTree:ENSGT00390000016384
            EMBL:DAAA02051956 IPI:IPI00693404 Ensembl:ENSBTAT00000013301
            Uniprot:E1BFM3
        Length = 123

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 58/99 (58%), Positives = 69/99 (69%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              +Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct:    61 TNQTQKENLRKFYKGKKYEPLDLRPKKTRAMRRRLNKHE 99


>RGD|1586622 [details] [associations]
            symbol:LOC686074 "similar to 60S ribosomal protein L35"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            HAMAP:MF_00374 RGD:1586622 RGD:1589358 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
            IPI:IPI00363291 RefSeq:XP_001066433.3 RefSeq:XP_002725386.2
            Ensembl:ENSRNOT00000051911 GeneID:686074 KEGG:rno:686074
            OMA:QLLMAKV Uniprot:D3ZN79
        Length = 123

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 56/99 (56%), Positives = 69/99 (69%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA++K  +LR K K +                +AKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKMKARDLRGKKKEELLKQLDDLKVEMSQLLMAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+R RLTKH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRCRLTKHE 99


>RGD|1589358 [details] [associations]
            symbol:LOC681918 "similar to 60S ribosomal protein L35"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            HAMAP:MF_00374 RGD:1586622 RGD:1589358 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
            IPI:IPI00363291 RefSeq:XP_001066433.3 RefSeq:XP_002725386.2
            Ensembl:ENSRNOT00000051911 GeneID:686074 KEGG:rno:686074
            OMA:QLLMAKV Uniprot:D3ZN79
        Length = 123

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 56/99 (56%), Positives = 69/99 (69%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA++K  +LR K K +                +AKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKMKARDLRGKKKEELLKQLDDLKVEMSQLLMAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+R RLTKH+
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRCRLTKHE 99


>RGD|1563157 [details] [associations]
            symbol:RGD1563157 "similar to 60S ribosomal protein L35"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            HAMAP:MF_00374 RGD:1563157 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
            IPI:IPI00360383 RefSeq:XP_001074453.1 RefSeq:XP_233992.1
            PRIDE:D3ZB50 Ensembl:ENSRNOT00000041376 GeneID:298910
            KEGG:rno:298910 CTD:298910 NextBio:644495 Uniprot:D3ZB50
        Length = 123

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 56/97 (57%), Positives = 68/97 (70%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +L  K K +               R+AKVTGGA +KLSKI+V+R SIA+VLTV
Sbjct:     1 MAKIKARDLHGKKKEELLKQLDDLKVEPSQFRIAKVTGGAMSKLSKIRVLRKSIARVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTK 97
             I+Q QK  LR+ YK KK+ PLDLRPKKTRA+RRRLTK
Sbjct:    61 INQIQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTK 97


>UNIPROTKB|F1M6G3 [details] [associations]
            symbol:F1M6G3 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384
            IPI:IPI00361408 Ensembl:ENSRNOT00000004213 OMA:LYPLRTS
            Uniprot:F1M6G3
        Length = 118

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 53/92 (57%), Positives = 64/92 (69%)

Query:     8 ELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKA 67
             +LR K + +               RVAKVTGGA +KLSKI+VVR SIA+VLTV SQ QK 
Sbjct:     3 DLRGKKEEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVNSQTQKE 62

Query:    68 ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              LR+ +K KK+ PLDLRPKKT A+RRRLTKH+
Sbjct:    63 NLRKFFKGKKYKPLDLRPKKTGAMRRRLTKHE 94


>FB|FBgn0029785 [details] [associations]
            symbol:RpL35 "Ribosomal protein L35" species:7227 "Drosophila
            melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
            "structural constituent of ribosome" evidence=ISS;IDA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS] [GO:0005811
            "lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            [GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
            "mitotic spindle organization" evidence=IMP] [GO:0051298
            "centrosome duplication" evidence=IMP] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
            GO:GO:0051298 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 GO:GO:0000022 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 ChiTaRS:RPL35 EMBL:AY118364
            ProteinModelPortal:Q8MT59 SMR:Q8MT59 STRING:Q8MT59 PRIDE:Q8MT59
            FlyBase:FBgn0029785 InParanoid:Q8MT59 OrthoDB:EOG444J2X
            ArrayExpress:Q8MT59 Bgee:Q8MT59 Uniprot:Q8MT59
        Length = 123

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 51/96 (53%), Positives = 65/96 (67%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             M ++K  ELR K K +               RVAKVTGG+P+KLSKI+VVR +IA+V  V
Sbjct:     1 MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLT 96
             + QKQK  LR+ +KNKK+ PLDLR KKTRAIR+ L+
Sbjct:    61 MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALS 96


>POMBASE|SPCC613.05c [details] [associations]
            symbol:rpl35 "60S ribosomal protein L35" species:4896
            "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
            evidence=NAS] [GO:0003735 "structural constituent of ribosome"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            PomBase:SPCC613.05c GO:GO:0005730 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918 OMA:LRTKSKE
            PIR:T41471 RefSeq:NP_587693.1 ProteinModelPortal:O74904 SMR:O74904
            IntAct:O74904 STRING:O74904 PRIDE:O74904 EnsemblFungi:SPCC613.05c.1
            GeneID:2539308 KEGG:spo:SPCC613.05c OrthoDB:EOG4GTPPM
            NextBio:20800474 Uniprot:O74904
        Length = 122

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 47/96 (48%), Positives = 64/96 (66%)

Query:     4 IKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
             +K  ELR++S+ +               RV K+ GG+ +KLSKIK  R  IA++LTVI++
Sbjct:     3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINE 62

Query:    64 KQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
               + A REAYKNKK++PLDLR KKTRAIRR LT ++
Sbjct:    63 SNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYE 98


>WB|WBGene00004449 [details] [associations]
            symbol:rpl-35 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
            GO:GO:0006412 GO:GO:0000003 GO:GO:0005840 GO:GO:0003735
            EMBL:FO080278 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            OMA:LRTKSKE GeneTree:ENSGT00390000016384 PIR:S44905
            RefSeq:NP_498702.1 ProteinModelPortal:P34662 SMR:P34662
            DIP:DIP-24880N MINT:MINT-1056742 STRING:P34662 PaxDb:P34662
            EnsemblMetazoa:ZK652.4.1 EnsemblMetazoa:ZK652.4.2
            EnsemblMetazoa:ZK652.4.3 GeneID:176097 KEGG:cel:CELE_ZK652.4
            UCSC:ZK652.4.1 CTD:176097 WormBase:ZK652.4 InParanoid:P34662
            NextBio:891104 Uniprot:P34662
        Length = 123

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 50/100 (50%), Positives = 66/100 (66%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             M ++K   LR + K                 RV+KVTGGA +KLSKI+VVR +IA++LTV
Sbjct:     1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
             I+Q QK  LR+ Y + K+ P+DLR KKTRAIRRRLT H++
Sbjct:    61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHEL 100


>ASPGD|ASPL0000059648 [details] [associations]
            symbol:AN1228 species:162425 "Emericella nidulans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374
            EMBL:BN001308 GO:GO:0006412 GO:GO:0005840 EMBL:AACD01000017
            GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
            OMA:LRTKSKE OrthoDB:EOG4GTPPM RefSeq:XP_658832.1
            ProteinModelPortal:Q5BE02 SMR:Q5BE02 STRING:Q5BE02
            EnsemblFungi:CADANIAT00001396 GeneID:2877009 KEGG:ani:AN1228.2
            Uniprot:Q5BE02
        Length = 124

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 49/98 (50%), Positives = 65/98 (66%)

Query:     2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
             +++K  +L  KSK +               RV K+TGGA +K  +I  VR SIA+VLTVI
Sbjct:     3 SKVKAGQLWGKSKDELTKQLDELKTELAQLRVQKITGGASSKSLRIHDVRKSIARVLTVI 62

Query:    62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             +  Q++ LR  YKNKK+LPLDLRP+ TRA+RRRLTKH+
Sbjct:    63 NANQRSQLRLFYKNKKYLPLDLRPRLTRALRRRLTKHE 100


>UNIPROTKB|F1LUA5 [details] [associations]
            symbol:F1LUA5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
            Pfam:PF00831 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
            IPI:IPI00391998 Ensembl:ENSRNOT00000036284 Uniprot:F1LUA5
        Length = 121

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 48/99 (48%), Positives = 62/99 (62%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             +A++K  +LR K   +                VAKVTGG  +KLSKI+V R  IA VL +
Sbjct:     1 VAKVKARQLRVKK--EELMKQDSLKVELSQFPVAKVTGGGASKLSKIRVERKPIACVLAI 58

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q QK  LR+ YK K++  LDLRPKKTRA+RR+L KHQ
Sbjct:    59 INQTQKKNLRKLYKGKEYKTLDLRPKKTRAVRRQLAKHQ 97


>RGD|1564550 [details] [associations]
            symbol:RGD1564550 "similar to 60S ribosomal protein L35"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374 RGD:1564550
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384
            OrthoDB:EOG45QHFR IPI:IPI00370775 RefSeq:XP_001081254.3
            RefSeq:XP_220862.5 Ensembl:ENSRNOT00000042211 GeneID:287623
            KEGG:rno:287623 CTD:287623 Uniprot:D3ZTG8
        Length = 123

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 48/97 (49%), Positives = 61/97 (62%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K + +               RV+KVTG A ++LSKI+VV   I  VLT+
Sbjct:     1 MAKIKAQDLRSKEEEELLKQLGDLKVELSQLRVSKVTGRALSRLSKIRVVCKFIVWVLTI 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTK 97
             I+Q QK  LR+ YK KK+ PLDLRP K RA+RR LTK
Sbjct:    61 INQTQKENLRKFYKGKKYKPLDLRPSKIRAMRRHLTK 97


>SGD|S000002350 [details] [associations]
            symbol:RPL35A "Ribosomal 60S subunit protein L35A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA;TAS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000463 "maturation of
            LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
            LSU-rRNA)" evidence=IMP] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=TAS] [GO:0002181 "cytoplasmic translation"
            evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            SGD:S000002350 EMBL:BK006938 GO:GO:0003735 GO:GO:0030687
            GO:GO:0002181 EMBL:X83276 PDB:4B6A PDBsum:4B6A GO:GO:0000463
            GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
            PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
            PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I PDB:2WW9 PDB:2WWA PDBsum:2WW9
            PDBsum:2WWA KO:K02918 EMBL:M82913 EMBL:Z74239 PIR:S30770
            RefSeq:NP_010090.1 RefSeq:NP_010145.1 ProteinModelPortal:P0CX84
            SMR:P0CX84 EnsemblFungi:YDL136W EnsemblFungi:YDL191W GeneID:851336
            GeneID:851419 KEGG:sce:YDL136W KEGG:sce:YDL191W CYGD:YDL191w
            EvolutionaryTrace:P0CX84 NextBio:968405 ArrayExpress:P0CX84
            GermOnline:YDL191W Uniprot:P0CX84
        Length = 120

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/99 (47%), Positives = 62/99 (62%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA +K +ELR KSK                 +V K++   P+ L KIK VR SIA VLTV
Sbjct:     1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLS--RPS-LPKIKTVRKSIACVLTV 57

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +
Sbjct:    58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFE 96


>SGD|S000002295 [details] [associations]
            symbol:RPL35B "Ribosomal 60S subunit protein L35B"
            species:4932 "Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic
            translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=TAS] [GO:0000463 "maturation of LSU-rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;TAS] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0030687
            "preribosome, large subunit precursor" evidence=IDA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
            InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 SGD:S000002295
            EMBL:BK006938 GO:GO:0003735 GO:GO:0030687 GO:GO:0002181 EMBL:X96876
            GO:GO:0000463 GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 KO:K02918 PIR:S30770 RefSeq:NP_010090.1
            RefSeq:NP_010145.1 EnsemblFungi:YDL136W EnsemblFungi:YDL191W
            GeneID:851336 GeneID:851419 KEGG:sce:YDL136W KEGG:sce:YDL191W
            NextBio:968405 EMBL:L02328 EMBL:Z74184 ProteinModelPortal:P0CX85
            SMR:P0CX85 CYGD:YDL136w GeneTree:ENSGT00390000016384
            ArrayExpress:P0CX85 GermOnline:YDL136W Uniprot:P0CX85
        Length = 120

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/99 (47%), Positives = 62/99 (62%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA +K +ELR KSK                 +V K++   P+ L KIK VR SIA VLTV
Sbjct:     1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLS--RPS-LPKIKTVRKSIACVLTV 57

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +
Sbjct:    58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFE 96


>UNIPROTKB|G4MSD2 [details] [associations]
            symbol:MGG_04455 "60S ribosomal protein L35" species:242507
            "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
            evidence=IEP] InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0043581
            EMBL:CM001232 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 RefSeq:XP_003713551.1 ProteinModelPortal:G4MSD2
            SMR:G4MSD2 EnsemblFungi:MGG_04455T0 GeneID:2678153
            KEGG:mgr:MGG_04455 Uniprot:G4MSD2
        Length = 125

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 44/96 (45%), Positives = 58/96 (60%)

Query:     2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
             +++K   L  K K +               R+ K+      KL+KI  +R SIA+VLTVI
Sbjct:     4 SKVKAGALWGKDKDELLKQLNELKTELNQLRIQKIASSG-TKLTKIHDIRKSIARVLTVI 62

Query:    62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTK 97
             + KQ+  LR  YKNKK+LPLDLR K+TRAIRRRL+K
Sbjct:    63 NLKQRQQLRLFYKNKKYLPLDLRAKQTRAIRRRLSK 98


>DICTYBASE|DDB_G0288349 [details] [associations]
            symbol:rpl35 "S60 ribosomal protein L35"
            species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0003735 "structural constituent
            of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
            dictyBase:DDB_G0288349 GO:GO:0006412 GenomeReviews:CM000154_GR
            GO:GO:0005840 EMBL:AAFI02000111 GO:GO:0003735 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 eggNOG:COG0255 KO:K02918
            OMA:LRTKSKE RefSeq:XP_636778.1 ProteinModelPortal:Q54J23 SMR:Q54J23
            STRING:Q54J23 PRIDE:Q54J23 EnsemblProtists:DDB0231152
            GeneID:8626581 KEGG:ddi:DDB_G0288349 ProtClustDB:CLSZ2440708
            Uniprot:Q54J23
        Length = 126

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 46/99 (46%), Positives = 55/99 (55%)

Query:     3 RIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS 62
             + K  ELR K+K                 RVA+V    P+KL+KI  VR +IA+VLTV +
Sbjct:     4 KTKAFELRTKNKTQLLEHLKELRTELSSLRVAQVKSPNPSKLAKIGTVRKAIARVLTVFN 63

Query:    63 QKQKAALREAYKNKKF--LPLDLRPKKTRAIRRRLTKHQ 99
             Q QK  LR  Y  K    +P DLR KKTRAIRRRLT  Q
Sbjct:    64 QTQKNHLRAVYSKKSSSKIPTDLRYKKTRAIRRRLTNKQ 102


>RGD|1593195 [details] [associations]
            symbol:LOC367050 "similar to 60S ribosomal protein L35"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001854 Pfam:PF00831 RGD:1593195 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 OrthoDB:EOG45QHFR IPI:IPI00370461
            RefSeq:XP_002727066.1 RefSeq:XP_345917.1 Ensembl:ENSRNOT00000051023
            GeneID:367050 KEGG:rno:367050 UCSC:RGD:1593195 NextBio:690541
            Uniprot:D3ZMZ5
        Length = 121

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 45/99 (45%), Positives = 58/99 (58%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +L  K K +                V+KVTGGA +KLSK  V+R   A VLTV
Sbjct:     1 MAKIKARDLPSKEKEELLKQLEDLKVELSQLCVSKVTGGAASKLSKTGVIRKCSACVLTV 60

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
             I+Q Q+ +LR+ YK +K+ PLDL PKKT    R LTK +
Sbjct:    61 INQTQEESLRKFYKGEKYKPLDLPPKKTT--HRWLTKQE 97


>UNIPROTKB|F2Z388 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
            sapiens" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
            Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:AL354928 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 HGNC:HGNC:10344 ChiTaRS:RPL35
            IPI:IPI01014264 ProteinModelPortal:F2Z388 SMR:F2Z388 PRIDE:F2Z388
            Ensembl:ENST00000493018 ArrayExpress:F2Z388 Bgee:F2Z388
            Uniprot:F2Z388
        Length = 96

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 40/74 (54%), Positives = 48/74 (64%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             MA+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct:     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query:    61 ISQKQKAALREAYK 74
             I+Q QK  LR+ YK
Sbjct:    61 INQTQKENLRKFYK 74


>UNIPROTKB|H0Y3A0 [details] [associations]
            symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
            sapiens" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
            Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:AL354928 Gene3D:1.10.287.310
            SUPFAM:SSF46561 TIGRFAMs:TIGR00012 HGNC:HGNC:10344 ChiTaRS:RPL35
            ProteinModelPortal:H0Y3A0 PRIDE:H0Y3A0 Ensembl:ENST00000373570
            Bgee:H0Y3A0 Uniprot:H0Y3A0
        Length = 96

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 39/73 (53%), Positives = 47/73 (64%)

Query:     2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
             A+IK  +LR K K +               RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct:     2 AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 61

Query:    62 SQKQKAALREAYK 74
             +Q QK  LR+ YK
Sbjct:    62 NQTQKENLRKFYK 74


>GENEDB_PFALCIPARUM|PF11_0260 [details] [associations]
            symbol:PF11_0260 "ribosomal protein L35,
            putative" species:5833 "Plasmodium falciparum" [GO:0015934 "large
            ribosomal subunit" evidence=ISS] InterPro:IPR001854 Pfam:PF00831
            HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            GO:GO:0015934 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 HOGENOM:HOG000207749 KO:K02918
            ProtClustDB:CLSZ2440708 RefSeq:XP_001347931.2
            ProteinModelPortal:Q8IIB4 IntAct:Q8IIB4
            EnsemblProtists:PF11_0260:mRNA GeneID:810807 KEGG:pfa:PF11_0260
            EuPathDB:PlasmoDB:PF3D7_1124900 Uniprot:Q8IIB4
        Length = 124

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 39/99 (39%), Positives = 56/99 (56%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             M+ +K +ELR   K +               R++K  G +  K SKI  VR ++A+VLTV
Sbjct:     1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              +QK+K  LR+ YKNKKF P +LR K T+  R +L+  Q
Sbjct:    60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQ 98


>UNIPROTKB|Q8IIB4 [details] [associations]
            symbol:PF11_0260 "60S ribosomal protein L35, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
            ribosomal subunit" evidence=ISS] InterPro:IPR001854 Pfam:PF00831
            HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            GO:GO:0015934 Gene3D:1.10.287.310 SUPFAM:SSF46561
            TIGRFAMs:TIGR00012 HOGENOM:HOG000207749 KO:K02918
            ProtClustDB:CLSZ2440708 RefSeq:XP_001347931.2
            ProteinModelPortal:Q8IIB4 IntAct:Q8IIB4
            EnsemblProtists:PF11_0260:mRNA GeneID:810807 KEGG:pfa:PF11_0260
            EuPathDB:PlasmoDB:PF3D7_1124900 Uniprot:Q8IIB4
        Length = 124

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 39/99 (39%), Positives = 56/99 (56%)

Query:     1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
             M+ +K +ELR   K +               R++K  G +  K SKI  VR ++A+VLTV
Sbjct:     1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59

Query:    61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
              +QK+K  LR+ YKNKKF P +LR K T+  R +L+  Q
Sbjct:    60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQ 98


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.131   0.344    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112        85   0.00091  102 3  10 22  0.39    29
                                                     29  0.46    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  31
  No. of states in DFA:  477 (51 KB)
  Total size of DFA:  94 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.03u 0.21s 12.24t   Elapsed:  00:00:00
  Total cpu time:  12.03u 0.21s 12.24t   Elapsed:  00:00:00
  Start:  Fri May 10 02:30:55 2013   End:  Fri May 10 02:30:55 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT2G39390 AT2G39390 AT2G39390	protein from Arabidopsis thaliana	2.2e-34
BLAST match view associations BLAST with AT3G55170 AT3G55170 AT3G55170	protein from Arabidopsis thaliana	1.5e-33
BLAST match view associations BLAST with AT3G09500 AT3G09500 AT3G09500	protein from Arabidopsis thaliana	2.0e-33
BLAST match view associations BLAST with Rpl35 Rpl35 Rpl35 ribosomal protein L35	gene from Rattus norvegicus	3.3e-24
BLAST match view associations BLAST with rpl35 rpl35 rpl35 ribosomal protein L35	gene_product from Danio rerio	4.2e-24
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Gallus gallus	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Bos taurus	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Sus scrofa	1.1e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Gallus gallus	3.8e-23
BLAST match view associations BLAST with RPL35 RPL35 RPL35 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-23
BLAST match view associations BLAST with Bt.62501 Bt.62501 Bt.62501 Uncharacterized protein	protein from Bos taurus	4.8e-23
BLAST match view associations BLAST with LOC686074 LOC686074 LOC686074 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	5.5e-22
BLAST match view associations BLAST with LOC681918 LOC681918 LOC681918 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	5.5e-22
BLAST match view associations BLAST with RGD1563157 RGD1563157 RGD1563157 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	9.0e-22
BLAST match view associations BLAST with F1M6G3 F1M6G3 F1M6G3 Uncharacterized protein	protein from Rattus norvegicus	4.4e-20
BLAST match view associations BLAST with RpL35 RpL35 RpL35 Ribosomal protein L35	protein from Drosophila melanogaster	7.2e-20
BLAST match view associations BLAST with rpl-35 rpl-35 rpl-35	gene from Caenorhabditis elegans	6.5e-19
BLAST match view associations BLAST with F1LUA5 F1LUA5 F1LUA5 Uncharacterized protein	protein from Rattus norvegicus	2.5e-17
BLAST match view associations BLAST with RGD1564550 RGD1564550 RGD1564550 similar to 60S ribosomal protein L35	gene from Rattus norvegicus	3.2e-17
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Ribosomal 60S subunit protein L35A	gene from Saccharomyces cerevisiae	1.3e-15
BLAST match view associations BLAST with RPL35B RPL35B RPL35B Ribosomal 60S subunit protein L35B	gene from Saccharomyces cerevisiae	1.3e-15
BLAST match view associations BLAST with MGG_04455 MGG_04455 MGG_04455 60S ribosomal protein L35	protein from Magnaporthe oryzae 70-15	1.8e-14
BLAST match view associations BLAST with rpl35 rpl35 rpl35 S60 ribosomal protein L35	gene from Dictyostelium discoideum	3.0e-14
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	9.1e-13
BLAST match view associations BLAST with RPL35 RPL35 RPL35 60S ribosomal protein L35	protein from Homo sapiens	3.1e-12
BLAST match view associations BLAST with PF11_0260 PF11_0260 PF11_0260 ribosomal protein L35, putative	gene from Plasmodium falciparum	8.2e-12
BLAST match view associations BLAST with PF11_0260 PF11_0260 PF11_0260 60S ribosomal protein L35, putative	protein from Plasmodium falciparum 3D7	8.2e-12