BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033748
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M5L0|RL35_EUPES 60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1
Length = 123
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 97/99 (97%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELRQK+K +LLNQLK+LKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1 MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
ISQKQK ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
>sp|Q9LZ41|RL354_ARATH 60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2
SV=1
Length = 123
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 93/100 (93%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR KSK DL NQLKE KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQA 100
>sp|Q9SF53|RL351_ARATH 60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=1
SV=1
Length = 123
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 94/100 (94%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR+KSK DL NQLKELKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQA 100
>sp|O80626|RL352_ARATH 60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2
SV=1
Length = 123
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/100 (91%), Positives = 93/100 (93%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR+KSK DL QLKE KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQA 100
>sp|Q9M3D2|RL353_ARATH 60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=1
SV=1
Length = 123
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/100 (90%), Positives = 91/100 (91%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR KSK DL QLKELKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQA 100
>sp|P17078|RL35_RAT 60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3
Length = 123
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 82/99 (82%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHE 99
>sp|Q6ZWV7|RL35_MOUSE 60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=2 SV=1
Length = 123
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 82/99 (82%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHE 99
>sp|Q8JHJ1|RL35_DANRE 60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3
Length = 123
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 82/99 (82%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHE 99
>sp|Q3MHM7|RL35_BOVIN 60S ribosomal protein L35 OS=Bos taurus GN=RPL35 PE=2 SV=3
Length = 123
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 82/99 (82%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL++LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99
>sp|Q29361|RL35_PIG 60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3
Length = 123
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 82/99 (82%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL++LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99
>sp|Q6UZF7|RL35_HIPCM 60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3
Length = 123
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 ITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHE 99
>sp|Q6PBC1|RL35_XENTR 60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2
SV=3
Length = 123
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHE 99
>sp|Q98TF7|RL35_CHICK 60S ribosomal protein L35 OS=Gallus gallus GN=RPL35 PE=2 SV=3
Length = 123
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99
>sp|P42766|RL35_HUMAN 60S ribosomal protein L35 OS=Homo sapiens GN=RPL35 PE=1 SV=2
Length = 123
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99
>sp|Q69CJ9|RL35_OPHHA 60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2
SV=3
Length = 123
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHE 99
>sp|Q90YT4|RL35_ICTPU 60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2
SV=3
Length = 123
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 81/99 (81%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL + +LK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKHVDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRP+KTRAIRR+LTKH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRQLTKHE 99
>sp|Q5DVH6|RL35_PLAFE 60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2
SV=3
Length = 123
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K +LL QL +LK E + LRVAKVTGGA +KL+KI VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNEPSQLRVAKVTGGAASKLTKICVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
I+Q QK LR+ YK KK+ PLDLRP+KTRA+RRRL KH+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPRKTRALRRRLNKHE 99
>sp|O74904|RL35_SCHPO 60S ribosomal protein L35 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl35 PE=1 SV=1
Length = 122
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 75/96 (78%)
Query: 4 IKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
+K ELR++S+ +L QL+EL+ ELA LRV K+ GG+ +KLSKIK R IA++LTVI++
Sbjct: 3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINE 62
Query: 64 KQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
+ A REAYKNKK++PLDLR KKTRAIRR LT ++
Sbjct: 63 SNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYE 98
>sp|P34662|RL35_CAEEL 60S ribosomal protein L35 OS=Caenorhabditis elegans GN=rpl-35 PE=3
SV=1
Length = 123
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 75/100 (75%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M ++K LR + K L +L E K ELA LRV+KVTGGA +KLSKI+VVR +IA++LTV
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
I+Q QK LR+ Y + K+ P+DLR KKTRAIRRRLT H++
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHEL 100
>sp|Q8L805|RL35_WHEAT 60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1
Length = 124
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 2 ARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
++K EL KSK DL QL ELK EL LR+ KV +KL++I +R SIA+VLTVI
Sbjct: 4 GKVKAGELWNKSKDDLTKQLAELKTELGQLRIQKVASSG-SKLNRIHDIRKSIARVLTVI 62
Query: 62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLT 96
+ KQ+A LR YKNKK+ PLDLR K+TRAIRRRL+
Sbjct: 63 NAKQRAQLRLFYKNKKYAPLDLRAKQTRAIRRRLS 97
>sp|P0DJ51|RL35_TETTS 60S ribosomal protein L35 OS=Tetrahymena thermophila (strain SB210)
GN=RPL35 PE=1 SV=1
Length = 124
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 73/96 (76%)
Query: 4 IKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
++V +LR +++ L+ +L +L+ EL+ LR+AK+ GG NKL +I +VR +IA+ LT+I++
Sbjct: 5 VRVFKLRTQTEEQLVGELGKLQTELSQLRIAKIAGGTANKLGRIGIVRKAIAKYLTIINE 64
Query: 64 KQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99
K++ A+++ +K K PLD+R KKTRAIRR+LTK Q
Sbjct: 65 KRRQAVKDQFKGKSLKPLDIRVKKTRAIRRKLTKKQ 100
>sp|Q54J23|RL35_DICDI 60S ribosomal protein L35 OS=Dictyostelium discoideum GN=rpl35 PE=3
SV=1
Length = 126
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 3 RIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS 62
+ K ELR K+K LL LKEL+ EL+ LRVA+V P+KL+KI VR +IA+VLTV +
Sbjct: 4 KTKAFELRTKNKTQLLEHLKELRTELSSLRVAQVKSPNPSKLAKIGTVRKAIARVLTVFN 63
Query: 63 QKQKAALREAY--KNKKFLPLDLRPKKTRAIRRRLTKHQ 99
Q QK LR Y K+ +P DLR KKTRAIRRRLT Q
Sbjct: 64 QTQKNHLRAVYSKKSSSKIPTDLRYKKTRAIRRRLTNKQ 102
>sp|P0CX85|RL35B_YEAST 60S ribosomal protein L35-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL35B PE=1 SV=1
Length = 120
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K +ELR KSK L +QL +LK ELA L+V K++ + L KIK VR SIA VLTV
Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +
Sbjct: 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEA 97
>sp|P0CX84|RL35A_YEAST 60S ribosomal protein L35-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL35A PE=1 SV=1
Length = 120
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K +ELR KSK L +QL +LK ELA L+V K++ + L KIK VR SIA VLTV
Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +
Sbjct: 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEA 97
>sp|P52817|RL35_BABBO 60S ribosomal protein L35 OS=Babesia bovis GN=RPL35 PE=2 SV=1
Length = 123
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 71/100 (71%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M +IKV+ELR K+ +LL QL++LK E A +RV KVT + +KLS+I V+R +IA+VLTV
Sbjct: 1 MEKIKVYELRNKTDAELLKQLEDLKQEYASMRVQKVTVTSTSKLSQIGVIRKAIAKVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
+Q+++ R+ Y +PL++RPK TRA RR LT Q+
Sbjct: 61 YNQRKREEARKQYTKISEMPLNMRPKLTRAKRRALTPKQL 100
>sp|Q4N756|RL35_THEPA 60S ribosomal protein L35 OS=Theileria parva GN=RPL35 PE=3 SV=1
Length = 123
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 69/102 (67%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M +++V ELR+KS +LL L +LK ELA RV+KVT +KLSKI +VR ++A+VLTV
Sbjct: 1 MEKLRVFELREKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQVLF 102
+Q++K R+ YK PL+LRPK TRA R+ LT Q+
Sbjct: 61 YNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTM 102
>sp|Q2VA69|RL36_THELE 60S ribosomal protein L35 OS=Theileria lestoquardi GN=RPL35 PE=2
SV=1
Length = 123
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M +++V ELR KS +LL L +LK ELA RV+KVT +KLSKI +VR ++A+VLTV
Sbjct: 1 MEKLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQVLF 102
+Q++K R+ YK PL+LRPK TRA R+ LT Q+
Sbjct: 61 YNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTM 102
>sp|Q4UIF8|RL35_THEAN 60S ribosomal protein L35 OS=Theileria annulata GN=RPL35 PE=3 SV=1
Length = 142
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 3 RIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS 62
+++V ELR KS +LL L +LK ELA RV+KVT +KLSKI +VR ++A+VLTV +
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 63 QKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQV 100
Q++K R+ YK PL+LRPK TRA R+ LT Q+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQL 119
>sp|A6VGZ1|RL29_METM7 50S ribosomal protein L29P OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rpl29p PE=3 SV=1
Length = 71
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K E+R+ S ++ ++ ELK EL V K TGGAP+ KI ++ +IA++LT+
Sbjct: 1 MAILKASEIRELSAEEMKGKIAELKRELMKEGVNKSTGGAPSNPGKISEIKRTIARILTI 60
Query: 61 ISQKQKAA 68
+++K+ A
Sbjct: 61 MNEKEAQA 68
>sp|A4FWB5|RL29_METM5 50S ribosomal protein L29P OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rpl29p PE=3 SV=1
Length = 71
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K E+R+ S ++ ++ ELK EL V K TGGAP+ KI ++ +IA++LT+
Sbjct: 1 MAILKASEIRELSAEEMKGKIAELKRELMKEGVNKSTGGAPSNPGKISEIKRTIARILTI 60
Query: 61 ISQKQKAA 68
+++K+ A
Sbjct: 61 MNEKEAQA 68
>sp|Q8SQQ7|RL352_ENCCU 60S ribosomal protein L35-2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL35C PE=1 SV=1
Length = 122
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 3 RIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTG--GAPNKLSKIKVVRLSIAQVLTV 60
+I+ LRQ + + E+KAELA LR K +G GA + IK + ++A+ LTV
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKAELAALRQKKNSGDVGA----NDIKTAKKNLARALTV 57
Query: 61 ISQKQKAALREAYKNKKF--LPLDLRPKKTRAIRRRLTKHQV 100
+K L EAY+ LP +LRPK R+ RR LTK Q+
Sbjct: 58 RREKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQL 99
>sp|Q6LXE6|RL29_METMP 50S ribosomal protein L29P OS=Methanococcus maripaludis (strain
S2 / LL) GN=rpl29p PE=3 SV=1
Length = 71
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K E+R+ S ++ ++ ELK EL V K TGGAP+ KI + +IA++LT+
Sbjct: 1 MAILKASEIRELSVEEMKGKIAELKRELMKEGVNKSTGGAPSNPGKISETKRTIARILTI 60
Query: 61 ISQKQKAA 68
+ +K+ A
Sbjct: 61 MKEKEAQA 68
>sp|Q8ST62|RL351_ENCCU 60S ribosomal protein L35-1 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL35A PE=1 SV=1
Length = 122
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 3 RIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTG--GAPNKLSKIKVVRLSIAQVLTV 60
+I+ LRQ + + E+KA+LA LR K +G GA + IK + ++A+ LTV
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKADLAALRQKKNSGDVGA----NDIKTAKKNLARALTV 57
Query: 61 ISQKQKAALREAYKNKKF--LPLDLRPKKTRAIRRRLTKHQV 100
+K L EAY+ LP +LRPK R+ RR LTK Q+
Sbjct: 58 RREKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQL 99
>sp|P54035|RL29_METJA 50S ribosomal protein L29P OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl29p PE=3 SV=1
Length = 70
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA ++ ELR S +L +L ELK EL R +K GAP+ +++ +R +IA++LT+
Sbjct: 1 MAILRADELRGMSMEELKEKLVELKRELLKERASKAVAGAPSNPGRMREIRRTIARILTI 60
Query: 61 ISQKQK 66
+++K++
Sbjct: 61 MNEKKR 66
>sp|A6UWU4|RL29_META3 50S ribosomal protein L29P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl29p PE=3 SV=1
Length = 65
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA ++ E+R+ S +L ++L E+K EL K TGGAP+ K+K ++ ++A++ T+
Sbjct: 1 MAILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTI 60
Query: 61 ISQKQ 65
+++K+
Sbjct: 61 MNEKK 65
>sp|Q7U4J2|RL29_SYNPX 50S ribosomal protein L29 OS=Synechococcus sp. (strain WH8102)
GN=rpmC PE=3 SV=1
Length = 69
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MAR E+RQ S D+ Q+ L+ EL LR + T N + K VR+ +AQ++TV
Sbjct: 1 MARPNAAEVRQLSDTDITEQINGLRRELFQLRFQQATRQLAN-THRFKEVRIKLAQLMTV 59
Query: 61 ISQKQKAA 68
S++Q++A
Sbjct: 60 QSERQRSA 67
>sp|Q0W1Y2|RL29_UNCMA 50S ribosomal protein L29P OS=Uncultured methanogenic archaeon
RC-I GN=rpl29p PE=3 SV=1
Length = 71
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA ++ E+R S +L QLK+L+ +L TGGAP +I+ +R +IA++LT+
Sbjct: 1 MAILRAKEIRGMSDKELDKQLKDLRNDLLKQHAISATGGAPENPGRIRELRRTIARILTI 60
>sp|A9KJI6|RL29_CLOPH 50S ribosomal protein L29 OS=Clostridium phytofermentans (strain
ATCC 700394 / DSM 18823 / ISDg) GN=rpmC PE=3 SV=1
Length = 69
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6 VHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQ 65
V EL+ KS +L L K EL LR T N S+IK VR +IA++ TVISQK
Sbjct: 7 VEELQAKSTTELNETLVAAKKELFNLRFQNATNQLDN-TSRIKDVRKNIARIQTVISQKA 65
Query: 66 KAA 68
KAA
Sbjct: 66 KAA 68
>sp|Q6A6N4|RL29_PROAC 50S ribosomal protein L29 OS=Propionibacterium acnes (strain
KPA171202 / DSM 16379) GN=rpmC PE=3 SV=1
Length = 77
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M ++ ELRQ S +L N+++ELK EL LR TG N ++++ VR IA+V TV
Sbjct: 1 MPKLSAAELRQLSGEELRNKVRELKEELFGLRFQSATGQLEN-TARLREVRKDIARVYTV 59
Query: 61 ISQK 64
+ ++
Sbjct: 60 LQER 63
>sp|Q6L1C0|RL29_PICTO 50S ribosomal protein L29P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl29p
PE=3 SV=1
Length = 65
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 9 LRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK 66
LR+ S +L +L LK L R + GGAP+ K++ +R IA+VLTV+ +K++
Sbjct: 8 LREMSDEELNEKLSSLKESLLRERSSVAMGGAPSSPGKMRSIRRQIARVLTVMEEKKR 65
>sp|Q0ID13|RL29_SYNS3 50S ribosomal protein L29 OS=Synechococcus sp. (strain CC9311)
GN=rpmC PE=3 SV=1
Length = 69
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MAR +LRQ S D+ Q+ L+ EL LR + T N + K RL +AQ+LTV
Sbjct: 1 MARPTASDLRQLSDADVTEQIDGLRRELFELRFQQATRQLGN-THRFKESRLKLAQLLTV 59
Query: 61 ISQKQKAA 68
S+++++A
Sbjct: 60 QSERKRSA 67
>sp|Q1AU37|RL29_RUBXD 50S ribosomal protein L29 OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=rpmC PE=3 SV=1
Length = 67
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MAR+K ELR+ +L +L E + EL LR TG N +++ VR +IA++LTV
Sbjct: 1 MARLKAPELRELDVEELERRLAETRRELFNLRFQHATGQLEN-TGQLREVRRNIARLLTV 59
Query: 61 ISQKQK 66
++QK++
Sbjct: 60 LNQKRQ 65
>sp|Q98PZ0|RL29_MYCPU 50S ribosomal protein L29 OS=Mycoplasma pulmonis (strain UAB
CTIP) GN=rpmC PE=3 SV=1
Length = 65
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 4 IKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
+K ++ K +L + +LKAEL LR TG ++ KIK+VR IA+VLT +SQ
Sbjct: 1 MKFKDINVKPVAELEQMVNDLKAELFTLRFQNSTG-QLDQTHKIKMVRQDIAKVLTALSQ 59
Query: 64 KQKAA 68
K + A
Sbjct: 60 KNRGA 64
>sp|Q8TX34|RL29_METKA 50S ribosomal protein L29P OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl29p PE=3
SV=1
Length = 77
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 3 RIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS 62
+++ E+R+ + + +LKELKAEL +K G P+ ++K ++ +IA++LT
Sbjct: 5 KLRPDEIREMTPEERREKLKELKAELLREMTSKSISGVPDNPGRVKEIKKNIARILTTER 64
Query: 63 QKQKAALREAYKN 75
+++ +RE K
Sbjct: 65 EEELRKIRETEKG 77
>sp|P10971|RL29_HALMA 50S ribosomal protein L29P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl29p
PE=1 SV=3
Length = 71
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M + V E+R + + +L +LK EL R + GGAP +IK +R +IA++ T+
Sbjct: 1 MTVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTI 60
Query: 61 ISQKQKAALRE 71
Q ++ L+E
Sbjct: 61 --QGEEGDLQE 69
>sp|Q97EI6|RL29_CLOAB 50S ribosomal protein L29 OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=rpmC PE=3 SV=1
Length = 67
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 IKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
+K ELR+K+ +L QL +LK EL LR TG N + +IK V+ SIAQ+ T++ +
Sbjct: 1 MKAKELREKAPEELNLQLNDLKTELFTLRFQLATGQLENPM-RIKEVKKSIAQIKTILRE 59
Query: 64 KQ 65
++
Sbjct: 60 EE 61
>sp|B1W3Z9|RL29_STRGG 50S ribosomal protein L29 OS=Streptomyces griseus subsp. griseus
(strain JCM 4626 / NBRC 13350) GN=rpmC PE=3 SV=1
Length = 74
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 2 ARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
A K ELR+ +LLN+L+E K EL LR TG N ++K VR IA++ T++
Sbjct: 3 AGTKASELRELGDEELLNKLREAKEELFNLRFQAATGQLENH-GRLKSVRKDIARIYTLM 61
Query: 62 SQKQ 65
+++
Sbjct: 62 RERE 65
>sp|C3PKR0|RL29_CORA7 50S ribosomal protein L29 OS=Corynebacterium aurimucosum (strain
ATCC 700975 / DSM 44827 / CN-1) GN=rpmC PE=3 SV=1
Length = 76
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 6 VHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQ 65
HE R+ +L N+LK+ K EL LR K TG N +I V+ IA++ TV+ +++
Sbjct: 7 AHEFRELDNAELENRLKDAKEELFNLRFQKATGQLTNN-RRIGTVKRDIARIYTVLRERE 65
>sp|Q18CG9|RL29_CLOD6 50S ribosomal protein L29 OS=Clostridium difficile (strain 630)
GN=rpmC PE=3 SV=1
Length = 67
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 IKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
+K ELR + +L+N+L + K+EL LR TG N ++IK V+ IA+V TV+++
Sbjct: 1 MKAKELRDLTSEELMNKLNDFKSELFSLRFQLATGQLEN-TARIKFVKKDIAKVKTVLAE 59
Query: 64 KQ 65
++
Sbjct: 60 RK 61
>sp|Q0SQF2|RL29_CLOPS 50S ribosomal protein L29 OS=Clostridium perfringens (strain
SM101 / Type A) GN=rpmC PE=3 SV=1
Length = 69
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 5 KVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQK 64
++ ELR + DL+ +L +LKAEL LR TG N + +I+ V+ SIAQ+ T+I ++
Sbjct: 5 ELKELRTSNPQDLIKKLGDLKAELFNLRFQLATGQLENPM-RIREVKKSIAQIKTIIREE 63
Query: 65 Q 65
+
Sbjct: 64 E 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,473,419
Number of Sequences: 539616
Number of extensions: 963990
Number of successful extensions: 5820
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 5657
Number of HSP's gapped (non-prelim): 485
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)