STRING 9.05 
  GSVIVG00021810001 protein (Vitis vinifera) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
GSVIVG00021810001
SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence (Mitochondrial cytochrome c);; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020558001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (310 aa)
     0.763
GSVIVG00034552001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (421 aa)
     0.517
GSVIVG00020593001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (276 aa)
     0.509
GSVIVG00032161001
RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (428 aa)
       0.483
GSVIVG00026455001
RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (563 aa)
       0.483
GSVIVG00015058001
RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (516 aa)
       0.483
PPO
RecName- Full=Polyphenol oxidase, chloroplastic; Short=PPO; EC=1.10.3.1; AltName- Full=Catechol [...] (607 aa)
       0.483
GSVIVG00010127001
RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1; Flags- Fragment;; Interconversion of [...] (305 aa)
       0.483
GSVIVG00034368001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (159 aa)
      0.472
GSVIVG00037523001
SubName- Full=Chromosome undetermined scaffold_89, whole genome shotgun sequence; (352 aa)
       0.468
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink