BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033763
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5VUM1|CF057_HUMAN UPF0369 protein C6orf57 OS=Homo sapiens GN=C6orf57 PE=2 SV=1
Length = 108
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 19 PPKLSPPLVGSSNSVSRLIRS---SSSTRQENSPVKEPGETVKSNQESEEIVDDRGDENE 75
P +L L S + R RS S R+ +S E VK + + ++ + R D E
Sbjct: 3 PSRLPWLLSWVSATAWRAARSPLLCHSLRKTSSSQGGKSELVKQSLKKPKLPEGRFDAPE 62
Query: 76 ---------EDTGDFVNKDTGEVGGPRGPEPTRYGDWERNGRCYDF 112
E D VN T E GGPRGPEPTRYGDWER GRC DF
Sbjct: 63 DSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
>sp|Q8BTE0|CF057_MOUSE UPF0369 protein C6orf57 homolog OS=Mus musculus PE=2 SV=2
Length = 104
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 26/33 (78%)
Query: 80 DFVNKDTGEVGGPRGPEPTRYGDWERNGRCYDF 112
D VN T E GGP+GPEPTRYGDWER GRC DF
Sbjct: 72 DDVNPVTKEKGGPKGPEPTRYGDWERKGRCIDF 104
>sp|Q54Y25|U369_DICDI UPF0369 protein OS=Dictyostelium discoideum GN=DDB_G0278459 PE=3
SV=1
Length = 108
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 26/32 (81%)
Query: 81 FVNKDTGEVGGPRGPEPTRYGDWERNGRCYDF 112
+VN T E+GGP+GPEPTRY DWERNGR DF
Sbjct: 77 YVNPITKEIGGPKGPEPTRYNDWERNGRVSDF 108
>sp|Q9ZDZ6|Y167_RICPR UPF0369 protein RP167 OS=Rickettsia prowazekii (strain Madrid E)
GN=RP167 PE=3 SV=1
Length = 78
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 88 EVGGPRGPEPTRYGDWERNGRCYDF 112
E+GG +G EPTRYGDW+ G+ DF
Sbjct: 54 EIGGIKGLEPTRYGDWQHKGKVTDF 78
>sp|Q92J60|Y209_RICCN UPF0369 protein RC0209 OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=RC0209 PE=3 SV=1
Length = 93
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 88 EVGGPRGPEPTRYGDWERNGRCYDF 112
E+GG +G EPTRYGDW+ G+ DF
Sbjct: 69 EIGGVKGLEPTRYGDWQHKGKVTDF 93
>sp|Q4UKG8|Y1112_RICFE UPF0369 protein RF_1112 OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=RF_1112 PE=3 SV=1
Length = 78
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 89 VGGPRGPEPTRYGDWERNGRCYDF 112
+GG +G EPTRYGDW+ G+ DF
Sbjct: 55 IGGVKGLEPTRYGDWQHKGKVTDF 78
>sp|P38345|FMP21_YEAST Protein FMP21, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FMP21 PE=1 SV=2
Length = 138
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 82 VNKDTGEVGGPRGPEPTRYGDWERNGRCYDF 112
VN TGEVGGP+ +P R+GD+ NGR DF
Sbjct: 109 VNPKTGEVGGPKQ-DPLRHGDYSFNGRVTDF 138
>sp|C6Y4C4|FMP21_SCHPO Protein fmp21, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fmp21 PE=2 SV=1
Length = 100
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 59 SNQESEEIVDDRGDENEEDTGDFVNKDTGEVGGPRGPEPTRYGDWERNGRCYDF 112
+ S+ VD E +D VN TGE+GGP+ EPT +GD+ GR DF
Sbjct: 48 QKESSKRPVDVMRREKHKDFEGDVNPKTGEIGGPKS-EPTVHGDYSYEGRVTDF 100
>sp|Q91590|TEFF1_XENLA Tomoregulin-1 OS=Xenopus laevis GN=tmeff1 PE=1 SV=2
Length = 370
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 28 GSSNSVSRLIRSSSSTRQENSPVKEPGETVKSNQESEEIVDDRGDENEEDTGDFVNKDTG 87
GSS S L+R +S RQE VK +++++ S D G +N + D ++ G
Sbjct: 197 GSSYSNPCLVREASCLRQEQIDVKHIRSCIETDETSIMGKKDEGLQNRPEVKDSTDQREG 256
Query: 88 EVGGPRGPEPTRYGDWERNGRC 109
+ G P Y + +G+C
Sbjct: 257 DFMGNYIPCSENYNGYCVHGKC 278
>sp|Q62018|CTR9_MOUSE RNA polymerase-associated protein CTR9 homolog OS=Mus musculus
GN=Ctr9 PE=1 SV=2
Length = 1173
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 19 PPKLSPPLVGSSNSVSRLIRSSSSTRQENSPVKEPGETVKSNQESEEIVDDRGDE---NE 75
P +L P + G S + + S S+ ++ + + G SN +S++ D+R + +E
Sbjct: 997 PERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSNSDSDD--DERPNRRASSE 1054
Query: 76 EDTGDFVNKDTGEVGGPR 93
D+ D NK E G PR
Sbjct: 1055 SDSDDNQNKSGSEAGSPR 1072
>sp|Q08D51|ATG2A_XENTR Autophagy-related protein 2 homolog A OS=Xenopus tropicalis GN=atg2a
PE=2 SV=1
Length = 1997
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 40 SSSTRQENSPVKEPGETVKSNQESEEIVDDRGDENEEDTGDFVNKDTGEVGGP 92
S + RQ SP P + +QES + D GD DT DF D +G P
Sbjct: 1375 SGNKRQTTSPSPPPLTEGRVSQESLGLSDTSGDSELTDTDDFCILDAPGIGVP 1427
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,432,613
Number of Sequences: 539616
Number of extensions: 2034498
Number of successful extensions: 6961
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 6717
Number of HSP's gapped (non-prelim): 295
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)