BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033766
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana
GN=At3g57810 PE=2 SV=1
Length = 317
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 85/100 (85%)
Query: 3 LLGQVADEFLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRD 62
L +VADEF+ RR ETEWFVEGDFD YVRQ+R PH WGGEPEL M+SHVL+MPITVYM+D
Sbjct: 209 LRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKD 268
Query: 63 KTSGSLKNLSEYGQEYGKENPIRVLYHGYGHYDLLRGHDA 102
+G L +++EYGQEYGK++PIRVLYHG+GHYD L H++
Sbjct: 269 DKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDALLLHES 308
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + + + +F Y + +WGG+ EL SH+LK PI V + +
Sbjct: 200 FLTNSSTGDMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTPIEVIQAESLPIVI-- 257
Query: 71 LSEYGQEYGKENPIRVLY--HGYG---HYDLLRGHDATTQS 106
G+EY + PI ++Y H YG HY+ + D +T++
Sbjct: 258 ----GEEYSNK-PITLVYMRHAYGLGEHYNSVEQLDTSTEN 293
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 9 DEFLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
D+F+ + E D D Y ++M WGGE E+L SHV PI++ M S
Sbjct: 218 DDFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISILM------SG 271
Query: 69 KNLSEYGQEYGKENPIRVLY--HGYG---HYDLLRGHDA 102
+ + Y E GK ++++Y H Y HY+ L HD+
Sbjct: 272 RPIQVYN-ECGKNPELKLVYYKHSYALGEHYNSL--HDS 307
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + + +F+ Y + +WGG+ EL SH+L+ PI V D S +
Sbjct: 206 FLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVVQMDSPSIIV-- 263
Query: 71 LSEYGQEY-GKENPIRVLY--HGYG---HYDLLR-GHDATTQS 106
G+EY GK PI ++Y H YG HY+ ++ DATT++
Sbjct: 264 ----GEEYSGK--PIILVYMRHAYGLGEHYNSVKLLTDATTEN 300
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 8 ADEFL--LRRAET-EWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKT 64
DEFL ET + F DF Y + + +WGG+ EL SHVLK PI V D
Sbjct: 182 VDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSP 241
Query: 65 SGSLKNLSEYGQEYGKENPIRVLYHGYGH 93
+ + G+EY K+ PI ++Y Y +
Sbjct: 242 TLII------GEEYVKK-PIILVYLRYAY 263
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + + +F Y + +WGG+ EL SH+L+ PI + D +
Sbjct: 198 FLTNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQADAPPIIV-- 255
Query: 71 LSEYGQEYGKENPIRVLY--HGYG---HYD 95
G+EY + NP+ ++Y H YG HY+
Sbjct: 256 ----GEEYPR-NPLVLVYMRHAYGLGEHYN 280
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + +F Y + +WGG+ EL SH+L+ PI + D +
Sbjct: 197 FLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIV-- 254
Query: 71 LSEYGQEYGKENPIRVLY--HGYG---HYD 95
G+EY K+ P+ ++Y H YG HY+
Sbjct: 255 ----GEEYSKK-PLILVYMRHAYGLGEHYN 279
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + +F+ Y + +WGG+ EL S VL++PI V D ++
Sbjct: 197 FLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQADSPCITI-- 254
Query: 71 LSEYGQEYGKENPIRVLY--HGYG---HYD 95
G+EY K I ++Y H YG HY+
Sbjct: 255 ----GEEYDKPK-ITLIYMRHAYGLGEHYN 279
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 9 DEFLLRRAETE---WFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTS 65
D+FL E E ++ DF Y + SWGG+ EL SHVL+ PI V + +
Sbjct: 184 DDFLPFFTEPEAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQANSPT 243
Query: 66 GSLKNLSEYGQEYGKENPIRVLYHGYG-----HYDLLR 98
+ G+EY ++ P+ ++Y Y HY+ ++
Sbjct: 244 IVI------GEEYTRK-PVTLVYLHYACDFGEHYNSVK 274
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 21 FVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEY-GQEYG 79
+V DF Y+ + R+ + G E+ + + P+ VY + +++ ++ + G
Sbjct: 261 YVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQN 320
Query: 80 KENPIRVLYHGYGHYDLLRGHDATT 104
++ PIRV YH HY+ + + T
Sbjct: 321 EDEPIRVSYHRNIHYNSVVNPNKAT 345
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 11 FLLRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKN 70
FL + + + + +F Y + +WGG+ EL SH+LK I V + + +
Sbjct: 200 FLTNSSTGDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTAIEVIQAESSPIVI-- 257
Query: 71 LSEYGQEYGKENPIRVLY--HGYG---HYDLLRGHDATTQS 106
G+EY + I ++Y H YG HY+ + D +T++
Sbjct: 258 ----GEEYSSK-AITLVYMRHAYGLGEHYNSVELLDTSTEN 293
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 15 RAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEY 74
R + E F+EG F+ Y++++ P W G+ E+ S + + +Y S S + +
Sbjct: 76 REKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNF 135
Query: 75 GQEYGKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
++ + + + HYD++ S +C+
Sbjct: 136 PEK------VLLCFSNGNHYDIVYPIKYKESSAMCQ 165
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 15 RAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEY 74
R + E F+EG F+ Y++++ P W G+ E+ S + + +Y S S + +
Sbjct: 76 REKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNF 135
Query: 75 GQEYGKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
++ + + + HYD++ S +C+
Sbjct: 136 PEK------VLLCFSNGNHYDIVYPITYKDSSAMCQ 165
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 13 LRRAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLS 72
L+R E + GDFD+Y++ M +P ++G EL S + + + +Y S+
Sbjct: 69 LKRRIFEKEIPGDFDSYMQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNR 128
Query: 73 EYGQEYGKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
Y + + RV ++ H+D + + ++ +C+
Sbjct: 129 RYAENF------RVFFNNENHFDSVYDVEYIERAAICQ 160
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY SG+
Sbjct: 247 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ----SGTE 302
Query: 69 KNLSEYGQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ +G + PIRV YH HY+ + + T
Sbjct: 303 PINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKAT 338
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY G+
Sbjct: 202 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQY----GTE 257
Query: 69 KNLSEYGQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ +G + ++ PIRV YH HY+ + + T
Sbjct: 258 PINTFHGIQKNEDEPIRVSYHRNIHYNSVVNPNKAT 293
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY G+
Sbjct: 207 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQY----GTE 262
Query: 69 KNLSEYGQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ +G + ++ PIRV YH HY+ + + T
Sbjct: 263 PINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKAT 298
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY G+
Sbjct: 207 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQY----GTE 262
Query: 69 KNLSEYGQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ +G + ++ PIRV YH HY+ + + T
Sbjct: 263 PINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKAT 298
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY S
Sbjct: 249 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQY-----ST 303
Query: 69 KNLSEY-GQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ ++ + G ++ PIRV YH HY+ + + T
Sbjct: 304 EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKAT 340
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 10 EFLLRRAE-TEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSL 68
++L++ A+ +V DF Y+ + R+ + G E+ + + P+ VY S
Sbjct: 249 DYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQY-----ST 303
Query: 69 KNLSEY-GQEYGKENPIRVLYHGYGHYDLLRGHDATT 104
+ ++ + G ++ PIRV YH HY+ + + T
Sbjct: 304 EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKAT 340
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 19 EWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEYGQEY 78
E +VEG F+ Y+ ++ P G+ E+ S + +Y + Y +
Sbjct: 277 ESYVEGSFEKYLERLGDPKESAGQLEIRALSLIYNRDFILYRFPGKPPT------YVTDN 330
Query: 79 GKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
G E+ I + Y GHYD + + + +C+
Sbjct: 331 GYEDKILLCYSSSGHYDSVYSKQFQSSAAVCQ 362
>sp|Q7TPY9|LDOC1_MOUSE Protein LDOC1 OS=Mus musculus GN=Ldoc1 PE=2 SV=1
Length = 151
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 3 LLGQVADEFLLRRAETEWFVEGDFDAYVRQMRQPHSWG 40
LL A+E+++ E+ +V GD+ A+V +M+Q WG
Sbjct: 95 LLSGEAEEWVMPYIESNSYVLGDYQAFVDEMKQYFGWG 132
>sp|B0W010|RRF2M_CULQU Ribosome-releasing factor 2, mitochondrial OS=Culex
quinquefasciatus GN=CPIJ000374 PE=3 SV=1
Length = 749
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 4 LGQVADEFLLRRAETEWFVEGDFD----AYVRQMRQPH--SWGGEPELLMSSHVLKMPIT 57
+G++ E + R +E+ ++ D AY + +P SW E E+ S +++M +T
Sbjct: 504 MGKLHLEIIKSRILSEYKIDVDLGPLQIAYKETLEEPARGSWTAEKEIAGSKQLVRMEVT 563
Query: 58 VYMRDKTSGSLKNLSEYGQE 77
V+ + K L + S QE
Sbjct: 564 VHAKRKDERFLLDSSPEAQE 583
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 19 EWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEYGQEY 78
E +VEG F+ Y+ ++ P G+ EL S + +Y + +
Sbjct: 271 ESYVEGSFEKYLERLGDPKESAGQLELKALSLIYNRDFIIYRYPGKPPTQVT------DN 324
Query: 79 GKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
G E+ I + Y GHYD + + + + +C+
Sbjct: 325 GFEDKIILCYSNNGHYDSVYSKEFQSTAGICQ 356
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 21 FVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDK-TSGSLKNLSEY-GQEY 78
+EGD ++ Q +W G PELL +L + I + + S ++ + Y G E
Sbjct: 357 LIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPED 416
Query: 79 GKENPIRVLYHGYGHYDLLRGH 100
I + + GHYD + H
Sbjct: 417 SLRPSIWLSWLSNGHYDAVFDH 438
>sp|Q9HRG2|THIC_HALSA Phosphomethylpyrimidine synthase OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=thiC PE=3 SV=1
Length = 476
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 17/58 (29%)
Query: 54 MPITVYMRDKTSGSLKN----LSEYGQEYGKENPIRVLYHGYGHYD----LLRGHDAT 103
+P+T D+T+G + LS++ E+G++NP+ Y HYD +L+ HD T
Sbjct: 168 LPLT---DDRTTGIVSRGGSILSQWMTEHGEQNPL------YTHYDELCEILQAHDVT 216
>sp|B0R400|THIC_HALS3 Phosphomethylpyrimidine synthase OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=thiC PE=3 SV=1
Length = 476
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 17/58 (29%)
Query: 54 MPITVYMRDKTSGSLKN----LSEYGQEYGKENPIRVLYHGYGHYD----LLRGHDAT 103
+P+T D+T+G + LS++ E+G++NP+ Y HYD +L+ HD T
Sbjct: 168 LPLT---DDRTTGIVSRGGSILSQWMTEHGEQNPL------YTHYDELCEILQAHDVT 216
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 21 FVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDK-TSGSLKNLSEY-GQEY 78
+EGD ++ Q +W G PELL +L + I + + S ++ + Y G E
Sbjct: 330 LIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPED 389
Query: 79 GKENPIRVLYHGYGHYDLLRGH 100
I + + GHYD + H
Sbjct: 390 SLRPSIWLSWLSNGHYDAVFDH 411
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 15 RAETEWFVEGDFDAYVRQMRQPHSWGGEPELLMSSHVLKMPITVYMRDKTSGSLKNLSEY 74
R + E + G F+ Y++++ P W G+ E+ S + + + S S + +
Sbjct: 76 REKFEAIIGGSFEGYLKRLENPQEWVGQMEISALSLMYRKDFITNLEPNVSPSQVTENNF 135
Query: 75 GQEYGKENPIRVLYHGYGHYDLLRGHDATTQSRLCK 110
++ + + + HYD++ S +C+
Sbjct: 136 PEK------VLLCFSNGNHYDIVYPVKYKESSAMCQ 165
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 28 AYVRQMRQPHSWGGEPELLMSSHVLKMPITVY 59
A ++Q+ H G P L+ SHV+K P +VY
Sbjct: 373 AEIKQLFPQHFNGDNPARLLKSHVVKTPRSVY 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,770,312
Number of Sequences: 539616
Number of extensions: 1650722
Number of successful extensions: 3498
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3474
Number of HSP's gapped (non-prelim): 32
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)