BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033770
(112 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 79/126 (62%), Positives = 93/126 (73%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M +GL NEVTF+AVLTACARA+LVE+GLELF S+ GEF +VPIMEHYGCVVDLL
Sbjct: 316 MFKKMKGEGLCPNEVTFIAVLTACARAKLVEIGLELFQSMAGEFGLVPIMEHYGCVVDLL 375
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G AGLL EA+EF L ACKIHGA+ L +EVG RLLELQP+HC +YV
Sbjct: 376 GMAGLLREASEFIRRMPFEPDASALGALLGACKIHGAIDLGNEVGSRLLELQPQHCGQYV 435
Query: 106 VLSNVH 111
LS++H
Sbjct: 436 ALSSIH 441
>gi|449528931|ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g10330-like [Cucumis
sativus]
Length = 477
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ NEVTFVA+LTACAR +LV+LGL+LF S+L +F +VPI EHY CVVDLLG+AG
Sbjct: 314 MKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAG 373
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA EF L SACKIHGA +L +EVG+RLLE+QP HC RYV L++
Sbjct: 374 LLREATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRHCGRYVTLAS 433
Query: 110 VH 111
++
Sbjct: 434 MN 435
>gi|449453704|ref|XP_004144596.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Cucumis sativus]
Length = 477
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ NEVTFVA+LTACAR +LV+LGL+LF S+L +F +VPI EHY CVVDLLG+AG
Sbjct: 314 MKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAG 373
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA EF L SACKIHGA +L +EVG+RLLE+QP HC RYV L++
Sbjct: 374 LLREATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRHCGRYVTLAS 433
Query: 110 VH 111
++
Sbjct: 434 MN 435
>gi|255567729|ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535903|gb|EEF37563.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/126 (57%), Positives = 88/126 (69%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG NEVTFV VLTAC RA+LV+ G+ LF S+ ++ V PIMEHYGCVVDLL
Sbjct: 314 MFEMMEEKGPSPNEVTFVVVLTACTRAKLVQFGMRLFQSMWSDYSVKPIMEHYGCVVDLL 373
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA+E + S ACKIHGA KL++EVG RLL LQP HC ++V
Sbjct: 374 GRAGLLREASEIIRSMPFEPDASVLGALLGACKIHGANKLANEVGGRLLRLQPLHCGQFV 433
Query: 106 VLSNVH 111
+LSN++
Sbjct: 434 LLSNIN 439
>gi|297739174|emb|CBI28825.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 88/126 (69%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M KGL +EVTFVAV+TACAR++ V LGL F S+ +F VVP M HYGCVVDLL
Sbjct: 107 LFEKMKMKGLCPDEVTFVAVITACARSKFVVLGLGFFQSMRCDFGVVPRMMHYGCVVDLL 166
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF+ S ACK+HGA++L +EVG+RLLE QP HC RYV
Sbjct: 167 GRAGLLEEATEFIKSMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEFQPHHCGRYV 226
Query: 106 VLSNVH 111
LSN++
Sbjct: 227 TLSNIY 232
>gi|359485621|ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g10330-like [Vitis
vinifera]
Length = 454
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 88/126 (69%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M KGL +EVTFVAV+TACAR++ V LGL F S+ +F VVP M HYGCVVDLL
Sbjct: 296 LFEKMKMKGLCPDEVTFVAVITACARSKFVVLGLGFFQSMRCDFGVVPRMMHYGCVVDLL 355
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF+ S ACK+HGA++L +EVG+RLLE QP HC RYV
Sbjct: 356 GRAGLLEEATEFIKSMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEFQPHHCGRYV 415
Query: 106 VLSNVH 111
LSN++
Sbjct: 416 TLSNIY 421
>gi|359485617|ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Vitis vinifera]
Length = 531
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 88/126 (69%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +GL +EVTFVAV+TACAR++ V LGL F S+ +F VVP M HYGCVVDLL
Sbjct: 324 LFEKMKMQGLCPDEVTFVAVITACARSKFVVLGLGFFQSMWCDFGVVPRMVHYGCVVDLL 383
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L ACK+HGA++L +EVG+RLLELQP HC RYV
Sbjct: 384 GRAGLLEEATEFIKRMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLELQPHHCGRYV 443
Query: 106 VLSNVH 111
LSN++
Sbjct: 444 TLSNIY 449
>gi|147809483|emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]
Length = 480
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 86/126 (68%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M GL +EVTFVAV+TACAR++ V LGL F S+ +F VVP M HYGCVVDLL
Sbjct: 232 LFEKMKMXGLCPDEVTFVAVITACARSKFVVLGLGFFQSMWCDFGVVPRMXHYGCVVDLL 291
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L ACK+HGA++L +EVG+RLLE QP HC RYV
Sbjct: 292 GRAGLLEEATEFIKXMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEXQPHHCGRYV 351
Query: 106 VLSNVH 111
LSN++
Sbjct: 352 TLSNIY 357
>gi|357474431|ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
gi|355508555|gb|AES89697.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
Length = 470
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +GL+ N +TFVAVLTACAR V GLELF S+ +F+VVP+MEHYGCVVDLL
Sbjct: 313 LFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLL 372
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA E + + AC+IHGA++L E+ K +L+LQ +HC +Y+
Sbjct: 373 GRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEIAK-MLKLQTQHCGQYL 431
Query: 106 VLSNVH 111
+LS+++
Sbjct: 432 LLSSMY 437
>gi|297843840|ref|XP_002889801.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335643|gb|EFH66060.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 467
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 15/123 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + N +T +A+LTACAR +LV+LG++LF S+ EF+++P EHYGC+VDL+
Sbjct: 311 MFEMMKSSNVHPNGITLLAILTACARYKLVDLGIQLFSSICSEFKIIPTSEHYGCIVDLI 370
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F L ACKIH +L ++VGK+L+ LQP+HC +YV
Sbjct: 371 GRAGLLVDAANFIKNLPFEPDASVFGALLGACKIHENAELGNKVGKQLIVLQPQHCGQYV 430
Query: 106 VLS 108
LS
Sbjct: 431 ALS 433
>gi|15218490|ref|NP_172504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213381|sp|Q9SY75.1|PPR30_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g10330
gi|4914335|gb|AAD32883.1|AC005489_21 F14N23.21 [Arabidopsis thaliana]
gi|332190445|gb|AEE28566.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 15/123 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + N +T +A+LTACAR++LV+LG++LF S+ E++++P EHYGCVVDL+
Sbjct: 311 MFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLI 370
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F+ S ACKIH +L + VGK+L+ LQP+HC +YV
Sbjct: 371 GRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYV 430
Query: 106 VLS 108
LS
Sbjct: 431 ALS 433
>gi|356515150|ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Glycine max]
Length = 503
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M GL+ N +TF AVLTACAR LV GL+LF S+ +F + P ++HYGCV+DLL
Sbjct: 345 MFDRMKLHGLKPNSITFAAVLTACARGNLVREGLDLFRSMWYDFGIEPNLKHYGCVIDLL 404
Query: 61 GRAGLLSEANEFL---------------WSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA E + AC+IHGA++L E+GK +L LQ +H +YV
Sbjct: 405 GRAGHIEEAAEIIRNMPFQPDASVLGAFLGACRIHGAIELGEEIGKNMLRLQTQHSGQYV 464
Query: 106 VLSNVH 111
+LS+++
Sbjct: 465 LLSSMN 470
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + GL E+TF AVL+AC+ LVE GLELF S+ ++ + P +EHYGC+VDLLGRAG
Sbjct: 337 MEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAG 396
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA +F L AC+IH +++ GK L+EL+PEH YV+LSN
Sbjct: 397 KLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSN 456
Query: 110 VH 111
++
Sbjct: 457 IY 458
>gi|242086268|ref|XP_002443559.1| hypothetical protein SORBIDRAFT_08g021530 [Sorghum bicolor]
gi|241944252|gb|EES17397.1| hypothetical protein SORBIDRAFT_08g021530 [Sorghum bicolor]
Length = 478
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M +G N++TF+AVL ACARA LVE+GL F +++ E+ V P+M HYGCVVDLLGR
Sbjct: 318 DMMRGEGFLPNQITFLAVLMACARAGLVEVGLYWFEAMVAEYRVAPLMVHYGCVVDLLGR 377
Query: 63 AGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG E A+ +W ACK+HG V+L+ E+G++L+ L P+ RY+ +
Sbjct: 378 AGRFGEAIQVIERMPFAADASVWGALLGACKLHGNVELAVEIGQKLISLGPQQSGRYMTI 437
Query: 108 SNVH 111
NV+
Sbjct: 438 RNVY 441
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D + + NE+TFV VL ACA LV+ GL +F+S+ E+ V P +EHYGC+VDLLG
Sbjct: 340 IDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 399
Query: 62 RAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
RAGLL+EA + + S AC+ HG V+L VGK LLEL+P++ RY +
Sbjct: 400 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 459
Query: 107 LSNVH 111
LSN++
Sbjct: 460 LSNIY 464
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D + + NE+TFV VL ACA LV+ GL +F+S+ E+ V P +EHYGC+VDLLG
Sbjct: 388 IDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 447
Query: 62 RAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
RAGLL+EA + + S AC+ HG V+L VGK LLEL+P++ RY +
Sbjct: 448 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 507
Query: 107 LSNVH 111
LSN++
Sbjct: 508 LSNIY 512
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 15/125 (12%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D + + NE+TFV VL ACA LV+ GL +F+S+ E+ V P +EHYGC+VDLLG
Sbjct: 389 IDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 448
Query: 62 RAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
RAGLL+EA + + S AC+ HG V+L VGK LLEL+P++ RY +
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 508
Query: 107 LSNVH 111
LSN++
Sbjct: 509 LSNIY 513
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N++TF+ +L+AC+ + LV+ G LF+ ++ F + P+ EHYG +VDLLGR+
Sbjct: 328 KMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKMVNHFGIQPVPEHYGLMVDLLGRS 387
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA +F LW ACKIHG V+L EV K+L+EL+P+H RY++LS
Sbjct: 388 GHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGSRYILLS 447
Query: 109 NVH 111
N++
Sbjct: 448 NIY 450
>gi|414877567|tpg|DAA54698.1| TPA: hypothetical protein ZEAMMB73_572803 [Zea mays]
Length = 495
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M +G ++++F+A+LTACARA LVE+GL F +++ E++VVP+M HYGCVVDLLGR
Sbjct: 315 DMMRGEGFLPDQISFLALLTACARAGLVEVGLYWFDAMVAEYKVVPLMIHYGCVVDLLGR 374
Query: 63 AGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
A E A+ +W ACK+HG V+L+ E+G++L+ L P+ RYV +
Sbjct: 375 ASRFGEAIQVIERMPFAADASVWGALLGACKLHGNVELAVEIGQKLMSLGPQQSGRYVTI 434
Query: 108 SNVH 111
NV+
Sbjct: 435 RNVY 438
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
EM +KG ++TF AVLTAC+ A +VE GLE+F S+ + V P +EHYGC+VDLLGR
Sbjct: 339 SEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGR 398
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L +A +F +W AC+IH V++ VGK LLE+QPE+ YV+L
Sbjct: 399 AGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLL 458
Query: 108 SNVH 111
SN++
Sbjct: 459 SNIY 462
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N++TF+ +L+AC+ + LV+ G LF+ ++ F + P+ EHYG +VDLLGR+
Sbjct: 328 KMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKMVNHFGIQPVPEHYGLMVDLLGRS 387
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA +F LW ACKIHG V+L EV K+L+EL+P+H RY++LS
Sbjct: 388 GHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGSRYILLS 447
Query: 109 NVHT 112
N++
Sbjct: 448 NIYA 451
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G+ N +TF A+LTAC+ A L E G LF S+ + + P MEHYGC+VDL+GRA
Sbjct: 333 QMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRA 392
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF L +AC++H +L E+GK L+EL P+H RY+ L+
Sbjct: 393 GLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLA 452
Query: 109 NVH 111
+++
Sbjct: 453 SIY 455
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G++ NEVTF+ +L AC+ ++LV+ G FHS+ + + P H+ C+VDL
Sbjct: 356 LFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLY 415
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG+L +A N +W +AC+IHG +L +VGKRLLEL P H RYV
Sbjct: 416 GRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYV 475
Query: 106 VLSNVH 111
+LSN++
Sbjct: 476 LLSNIY 481
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G++ TF AVLTAC+ LVE G LF S+ + + P+MEHYGC+VDLLGRA
Sbjct: 334 QMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRA 393
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF L +AC +H ++L E+GK L+EL PEH RY+ L+
Sbjct: 394 GFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLA 453
Query: 109 NVH 111
++H
Sbjct: 454 SIH 456
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 80/123 (65%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N++TF+ +L AC+ + LV+ G LF+ ++ +F + P+ EHYG +VDLLGRA
Sbjct: 333 KMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFNRMVNDFGIQPVPEHYGLMVDLLGRA 392
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA +F LW AC IHG V+L E+ K+L+EL+P H RY++LS
Sbjct: 393 GLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEVELGEEIAKKLIELEPRHGSRYILLS 452
Query: 109 NVH 111
N++
Sbjct: 453 NIY 455
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N++TF+ +L AC+ + LV+ G LF+ ++ F + P+ EHYG +VDLLGRA
Sbjct: 327 KMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYGLMVDLLGRA 386
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA +F LW ACKIHG V+L E+ K+L+EL+P H RY++LS
Sbjct: 387 GHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGSRYILLS 446
Query: 109 NVH 111
N++
Sbjct: 447 NIY 449
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G +++TFV VL+AC+ A LVELG + F S++ ++++ P ++HYGC++DLLGRA
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRA 516
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL EA + W AC++HG V+L K L EL+PE+ YV+LS
Sbjct: 517 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLS 576
Query: 109 NVH 111
N++
Sbjct: 577 NIY 579
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ GL+ +EVTFV VL AC + L+E G +LF S+ + + P MEHYGC+VDLLGR
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN +W SAC+ HG VK+ G++LLE++ +H RYV+LS
Sbjct: 501 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560
Query: 109 NV 110
N+
Sbjct: 561 NI 562
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL--GEFEVVPIMEHYGCVVD 58
+ EM G++ +EVT VAVL+ACAR +LG L+H + G F I+ V+D
Sbjct: 334 LFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILT--AAVMD 391
Query: 59 LLGRAGLLSEANEFL 73
+ + G + A E
Sbjct: 392 MYAKCGSIDSALEIF 406
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ GL+ +EVTFV VL AC + L+E G +LF S+ + + P MEHYGC+VDLLGR
Sbjct: 226 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 285
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN +W SAC+ HG VK+ G++LLE++ +H RYV+LS
Sbjct: 286 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 345
Query: 109 NV 110
N+
Sbjct: 346 NI 347
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLL--GEFEVVPIMEHYGCVVDLLGRAGLLSE 68
++EVT VAVL+ACAR +LG L+H + G F I+ V+D+ + G +
Sbjct: 129 NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILT--AAVMDMYAKCGSIDS 186
Query: 69 ANEFL 73
A E
Sbjct: 187 ALEIF 191
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++ E ++ N +T V VLTACA A V+ GL +F ++ + V P +EHYGC+VDLL
Sbjct: 382 LFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLL 441
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GL SEA + L AC+IHG L+ VGK LLEL+P++ RYV
Sbjct: 442 GRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYV 501
Query: 106 VLSNVH 111
+LSN++
Sbjct: 502 LLSNIY 507
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++ E ++ N +T V VLTACA A V+ GL +F ++ + V P +EHYGC+VDLL
Sbjct: 382 LFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLL 441
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GL SEA + L AC+IHG L+ VGK LLEL+P++ RYV
Sbjct: 442 GRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYV 501
Query: 106 VLSNVH 111
+LSN++
Sbjct: 502 LLSNIY 507
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G +++TFV VL+AC+ A LVELG + F S++ ++++ P ++HYGC++DLLGRA
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRA 516
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL EA + W AC++HG V+L K L EL+PE+ YV+LS
Sbjct: 517 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLS 576
Query: 109 NVH 111
N++
Sbjct: 577 NIY 579
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ R N +T + VL+ACA + +V+ GL +F+S+ + + P MEHYGCVVDLLGRA
Sbjct: 384 KMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRA 443
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E ++S AC+ HG V+L VGK LLEL+P++ RY +LS
Sbjct: 444 GLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLS 503
Query: 109 NVH 111
N++
Sbjct: 504 NIY 506
>gi|357152420|ref|XP_003576113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Brachypodium distachyon]
Length = 473
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M G N++TF+++LT CARA LVE+GL F +++ E++V P+M HYGCVVDLLGR
Sbjct: 312 NMMIVGGFLPNQITFLSILTGCARAGLVEIGLYWFEAMVTEYKVTPVMSHYGCVVDLLGR 371
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG EA E + W ACK+HG V+L E+ ++L+ L P+ RYV +
Sbjct: 372 AGRFIEAIEIIERMPFPPDASVWGALLGACKLHGNVELVAEIERKLVALGPQQSDRYVAI 431
Query: 108 SNVH 111
N++
Sbjct: 432 RNIY 435
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 77/123 (62%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G++ N +TF AVLTAC+ LVE G +F+++ ++ + P +EHYGC+VDLLGRA
Sbjct: 334 EMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRA 393
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EAN F L AC+IH ++L ++G+ L+E+ H RYV ++
Sbjct: 394 GLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMA 453
Query: 109 NVH 111
N+H
Sbjct: 454 NIH 456
>gi|297739172|emb|CBI28823.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 70/115 (60%), Gaps = 16/115 (13%)
Query: 13 NEVTFVAVLTACARARLVELG-LELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEANE 71
NEV F + A + G L F S+ +F VVP M HYGCVVDLLGRAGLL EA E
Sbjct: 265 NEVEFTVFMGTALIALYGKTGCLGFFQSMWCDFGVVPRMVHYGCVVDLLGRAGLLEEATE 324
Query: 72 F---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
F L ACK+HGA++L +EVG+RLLELQP HC RYV LSN++
Sbjct: 325 FIKRMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLELQPHHCGRYVTLSNIY 379
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+ N++TFVA+L+AC+ A +V+ G +L + + + P +EHYGCV+DLL RA
Sbjct: 126 EMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARA 185
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E + + C+IHG +L VGKRL+ LQP H RY++LS
Sbjct: 186 GLLEEAMELIGTMPMEPNPCALGALLEGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 245
Query: 109 NVHT 112
N++
Sbjct: 246 NIYA 249
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G+ N++TFVA+L+AC+ A +V+ G +L + + + P +EHYGCV+DLL
Sbjct: 302 LFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 361
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA E L C+IHG +L VGKRL+ LQP H RY+
Sbjct: 362 ARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 421
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 422 LLSNIYA 428
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G+ NE+TFV +L+AC A LV+LG + F S++ ++++ P +HYGC++DLL
Sbjct: 450 LFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLL 509
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL EA L W AC+ HG V+L V +RL EL+P++ YV
Sbjct: 510 GRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYV 569
Query: 106 VLSNVH 111
+LSN++
Sbjct: 570 LLSNIY 575
>gi|297738072|emb|CBI27273.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G +++TFV VL+AC+ A LVELG + F S++ ++++ P ++HYGC++DLLGRA
Sbjct: 155 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRA 214
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL EA + W AC++HG V+L K L EL+PE+ YV+LS
Sbjct: 215 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLS 274
Query: 109 NVHT 112
N++
Sbjct: 275 NIYA 278
>gi|222630922|gb|EEE63054.1| hypothetical protein OsJ_17862 [Oryza sativa Japonica Group]
Length = 470
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G N +TFVAV+TACARA LVE GL+ F L E++V+P+M HYGCVVDLLGRAG
Sbjct: 316 MRSEGFLPNHITFVAVMTACARAGLVETGLDFFEELFTEYKVIPMMVHYGCVVDLLGRAG 375
Query: 65 LLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
E A++ +W ACKIHG ++LS ++ ++L+ L + RYV + N
Sbjct: 376 RFLEAIQIIERMPFMADDSVWGALLGACKIHGNIELSAQIREKLIVLGGQQPGRYVTVRN 435
Query: 110 VH 111
++
Sbjct: 436 MY 437
>gi|115462927|ref|NP_001055063.1| Os05g0271900 [Oryza sativa Japonica Group]
gi|50878453|gb|AAT85227.1| unknown protein [Oryza sativa Japonica Group]
gi|113578614|dbj|BAF16977.1| Os05g0271900 [Oryza sativa Japonica Group]
gi|215734926|dbj|BAG95648.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 488
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G N +TFVAV+TACARA LVE GL+ F L E++V+P+M HYGCVVDLLGRAG
Sbjct: 334 MRSEGFLPNHITFVAVMTACARAGLVETGLDFFEELFTEYKVIPMMVHYGCVVDLLGRAG 393
Query: 65 LLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
E A++ +W ACKIHG ++LS ++ ++L+ L + RYV + N
Sbjct: 394 RFLEAIQIIERMPFMADDSVWGALLGACKIHGNIELSAQIREKLIVLGGQQPGRYVTVRN 453
Query: 110 VH 111
++
Sbjct: 454 MY 455
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G+ N++TFVA+L+AC+ A +V+ G +L + + + P +EHYGCV+DLL
Sbjct: 386 LFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 445
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L EA E L C+IHG +L VGKRL+ LQP H RY+
Sbjct: 446 ARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 505
Query: 106 VLSNVH 111
+LSN++
Sbjct: 506 LLSNIY 511
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE--FEVVPIMEHYGCVVD 58
+ D+M G++ E T V++L+ACA ++ GL L H+ + + EV I+ +VD
Sbjct: 285 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNSIVG--TALVD 341
Query: 59 LLGRAGLLSEANEFL----------WSAC----KIHGAVKLSHEVGKRLLE--LQPEHCR 102
+ + G +S A + W+ IHG VK + ++ K + E ++P
Sbjct: 342 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 401
Query: 103 RYVVLS 108
+LS
Sbjct: 402 FVAILS 407
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ N +TF AVLTAC+ LVE G +F+S+ ++ + P +EHYGC+VDLLGRA
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA F L AC+IH ++L E+G+ L+ + P H RYV +
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Query: 109 NVH 111
N+H
Sbjct: 458 NIH 460
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G+ N++TFVA+L+AC+ A +V+ G +L + + + P +EHYGCV+DLL
Sbjct: 477 LFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 536
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L EA E L C+IHG +L VGKRL+ LQP H RY+
Sbjct: 537 ARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 596
Query: 106 VLSNVH 111
+LSN++
Sbjct: 597 LLSNIY 602
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE--FEVVPIMEHYGCVVD 58
+ D+M G++ E T V++L+ACA ++ GL L H+ + + EV I+ +VD
Sbjct: 376 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNSIVG--TALVD 432
Query: 59 LLGRAGLLSEANEFL----------WSAC----KIHGAVKLSHEVGKRLLE--LQPEHCR 102
+ + G +S A + W+ IHG VK + ++ K + E ++P
Sbjct: 433 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 492
Query: 103 RYVVLS 108
+LS
Sbjct: 493 FVAILS 498
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ E+ KGL +E+TFV VL AC+ +V+ G + F + E+ +VP +EHYGC+VDLL
Sbjct: 184 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLL 243
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ +A+EF L AC IHG + L +LL+L+P+H YV
Sbjct: 244 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYV 303
Query: 106 VLSNVH 111
+LSN++
Sbjct: 304 LLSNLY 309
>gi|255580953|ref|XP_002531295.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529128|gb|EEF31108.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 313
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 78/134 (58%), Gaps = 23/134 (17%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++D M G++ N VTF ++ +AC + LVE GL LFH++ G+F + P ++HYGC+VDLL
Sbjct: 138 LLDGMGASGIKPNAVTFTSLFSACCHSGLVEEGLHLFHNMKGKFGIEPGIQHYGCIVDLL 197
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEH----- 100
G+ G L EA EF LW SACK+HG V + +V K LL LQPE
Sbjct: 198 GKGGHLKEAYEFIAGMPMEPDAILWRCLLSACKVHGDVVMGEKVAKILLHLQPEKNSVES 257
Query: 101 ---CRRYVVLSNVH 111
YV LSNV+
Sbjct: 258 DDSSEDYVALSNVY 271
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M++EM ++ ++ +E+TF+ +L AC+ LVE G E FH + E+ +VP ++HYGC+VDLL
Sbjct: 301 MLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLL 360
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F LW SAC HG V++ V +R+ EL H YV
Sbjct: 361 GRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYV 420
Query: 106 VLSNV 110
+ SN+
Sbjct: 421 IFSNL 425
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G+ +EVTFV VLTAC+ LVE G + F + + + P +EHYGC+VDLL
Sbjct: 394 LFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLL 453
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL++EA EF L ACKIHG V+L V K++ +++P YV
Sbjct: 454 GRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYV 513
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 514 LMSNIYS 520
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G R N+VT VA+L AC+ L+++GLE+F+S+ F V P +EHYGC+VDLLGR
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F L SACKIHG ++L ++ KRL E + YV+LS
Sbjct: 406 GRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLS 465
Query: 109 NVH 111
N++
Sbjct: 466 NLY 468
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G+ +EVTFV VLTAC+ LVE G + F + + + P +EHYGC+VDLL
Sbjct: 416 LFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLL 475
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL++EA EF L ACKIHG V+L V K++ +++P YV
Sbjct: 476 GRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYV 535
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 536 LMSNIYS 542
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G R N+VT VA+L AC+ L+++GLE+F+S+ F V P +EHYGC+VDLLGR
Sbjct: 336 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRV 395
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F L SACKIHG ++L ++ KRL E + YV+LS
Sbjct: 396 GRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLS 455
Query: 109 NVH 111
+++
Sbjct: 456 HIY 458
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ ++ F+ +L+AC+ + LVE G + F + +F +VP +EHYGC+VDLL
Sbjct: 299 LFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLL 358
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL++EA EF +W SAC++HG +KL + K+L+ +P H YV
Sbjct: 359 SRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYV 418
Query: 106 VLSNVH 111
+LSN++
Sbjct: 419 LLSNIY 424
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M L ++VTF+A+L AC+ A LV+ GL +F ++ +F++ P MEHYGCVVDLL
Sbjct: 402 LFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLL 461
Query: 61 GRAGLLSE-----------ANEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RA + + AN LW+ AC+ G L+ ++G+R++EL+P+ C RYV
Sbjct: 462 CRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYV 521
Query: 106 VLSNVH 111
+LSN++
Sbjct: 522 MLSNLY 527
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M L ++VTF+A+L AC+ A LV+ GL +F ++ +F++ P MEHYGCVVDLL
Sbjct: 304 LFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLL 363
Query: 61 GRAGLLSE-----------ANEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RA + + AN LW+ AC+ G L+ ++G+R++EL+P+ C RYV
Sbjct: 364 CRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYV 423
Query: 106 VLSNVH 111
+LSN++
Sbjct: 424 MLSNLY 429
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 350 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 409
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF L AC++HG +L + +LE +P+ Y+
Sbjct: 410 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 469
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 470 LLSNLH 475
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 345 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 404
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF L AC++HG +L + +LE +P+ Y+
Sbjct: 405 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 464
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 465 LLSNLH 470
>gi|293331391|ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea mays]
gi|223946981|gb|ACN27574.1| unknown [Zea mays]
gi|413932359|gb|AFW66910.1| hypothetical protein ZEAMMB73_426189 [Zea mays]
Length = 499
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N++TF+ +L+AC + LV G LF S++ +F + P +HYG +VDL+GR+
Sbjct: 336 KMQMVGVQPNDITFIGLLSACTHSGLVNEGRRLFDSMIEDFGIQPFPQHYGLMVDLIGRS 395
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA F LW SACK+HG V+L EV K+L+EL+P H RY++LS
Sbjct: 396 GRVMEALYFVKSMPVEPHPGLWGALASACKMHGKVELGEEVAKKLIELEPRHGSRYILLS 455
Query: 109 NVH 111
N++
Sbjct: 456 NLY 458
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EK + N+VTF+ VL+AC+ A LV+ G +LF S+ +F + P +EHYGC+VD+LGRAG
Sbjct: 418 MLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAG 477
Query: 65 LLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+ EA +F +W ++CK+H V++ E K+L+ L+P H Y++LSN
Sbjct: 478 LIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSN 537
Query: 110 VH 111
++
Sbjct: 538 IY 539
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 213 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 272
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF L AC++HG +L + +LE +P+ Y+
Sbjct: 273 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 332
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 333 LLSNLH 338
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM GL +EVT+VA+L AC + LV+ G LF S+L E+ V P MEHYGC+VDLL
Sbjct: 408 LFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLL 467
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+E AN +W SACK+ G V+L+ + LL ++ +H RYV
Sbjct: 468 GRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVELARLASQELLAMENDHGARYV 527
Query: 106 VLSNVHT 112
+LSN+ T
Sbjct: 528 MLSNMLT 534
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G+R +E+ F+++L AC+ A LVE G E F + G + + P +EHYGC+VDL GRA
Sbjct: 361 KMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRA 420
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A EF +W AC +HG VKL+ +V +RL EL P + +V+LS
Sbjct: 421 GQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLS 480
Query: 109 NVH 111
N +
Sbjct: 481 NAY 483
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ KG+R NE + VL+ACA+A +E G ++ H + + + I+ ++D +
Sbjct: 259 ELQRKGMRPNETSLTGVLSACAQAGALEFG-KILHGFIEKSGLAWIVSVNNALLDTYSKC 317
Query: 64 G 64
G
Sbjct: 318 G 318
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +G + NEVTFV VL+AC+RA L++ G E+F+ ++ + P +EHYGC+VDLL
Sbjct: 329 IFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLL 388
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR GLL EA E +W AC+ HG V+L+ V ++LLEL P+ +V
Sbjct: 389 GRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFV 448
Query: 106 VLSNVH 111
LSN++
Sbjct: 449 QLSNMY 454
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G++ N++TF+ +L AC+ A LV G +LF ++ F +VP +EHYGC+VDLLGRA
Sbjct: 364 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA+E + W +AC++H +L +LLE++PE+C V++S
Sbjct: 424 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 483
Query: 109 NVH 111
N++
Sbjct: 484 NIY 486
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G++ N++TF+ +L AC+ A LV G +LF ++ F +VP +EHYGC+VDLLGRA
Sbjct: 450 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA+E + W +AC++H +L +LLE++PE+C V++S
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 569
Query: 109 NVH 111
N++
Sbjct: 570 NIY 572
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M GL +E TFV+VL AC+ A +V GL++F+ ++ V+P ++HY CV+D+LGRA
Sbjct: 416 QMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRA 475
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A F L AC+IHG +KL HE+ +++ E++P YV+LS
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLS 535
Query: 109 NVH 111
N++
Sbjct: 536 NMY 538
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +G + NEVTFV VL+AC+RA L++ G E+F+ ++ + P +EHYGC+VDLL
Sbjct: 359 IFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLL 418
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR GLL EA E +W AC+ HG V+L+ V ++LLEL P+ +V
Sbjct: 419 GRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFV 478
Query: 106 VLSNVH 111
LSN++
Sbjct: 479 QLSNMY 484
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++ + NEVTFV VL C+ + LVE G ++F S+ E+ + P +EHYGC+VDL GRA
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA N +W SAC+IHG ++L KR+LEL+P+H V++SN
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 110 VH 111
++
Sbjct: 556 IY 557
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ N +TF VLTAC+ LVE G +F+++ ++ + P +EHYGCVVDLL RA
Sbjct: 367 EMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRA 426
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA F L AC+IH ++L E+G+ L+ + P H RYV +
Sbjct: 427 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 486
Query: 109 NVH 111
N+H
Sbjct: 487 NIH 489
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E + N++TFVA+L+AC+ A +V+ G +L + + + P +EHY CV+DLL RA
Sbjct: 285 EMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARA 344
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L C+IHG +L VGKRL+ LQP H RY++LS
Sbjct: 345 GLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 404
Query: 109 NVHT 112
N++
Sbjct: 405 NIYA 408
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E GL ++TF AVL+AC+ LVE G ++F S+ + V P +EHYGC+VDLLGRAG
Sbjct: 343 MVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAG 402
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L AC+IH ++ VGK L++L P+H YV+LSN
Sbjct: 403 KLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSN 462
Query: 110 VH 111
++
Sbjct: 463 IY 464
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM GL+ + +TFVAVL+AC LV+ G +LF S+ + V P MEHYGC+VDLL
Sbjct: 447 LFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLL 506
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L E AN +W SACK+HG V L+ L+ELQ +H YV
Sbjct: 507 GRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDHGAGYV 566
Query: 106 VLSNV 110
+LSN+
Sbjct: 567 MLSNM 571
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHY-GCVVDLLGRAGLLS 67
G++ +EV VA L+ACAR +ELG + GE I + VVD+ + G +
Sbjct: 350 GMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSID 409
Query: 68 EA------------NEFLW----SACKIHG----AVKLSHEVGKRLLELQPEHCRRYVVL 107
A FL+ S HG A L E+G LL L+P++ VL
Sbjct: 410 IALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMG--LLGLKPDNITFVAVL 467
Query: 108 S 108
S
Sbjct: 468 S 468
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++GL+ N+VTF+ VL AC+ LVE GL F S+ + + PI +HY CVVD+L
Sbjct: 636 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDIL 695
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A F +W SACK+H +++ K LLEL+P YV
Sbjct: 696 GRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYV 755
Query: 106 VLSNVH 111
+LSN +
Sbjct: 756 LLSNAY 761
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++GL+ N+VTF+ VL AC+ LVE GL F S+ + + PI +HY CVVD+L
Sbjct: 636 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDIL 695
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A F +W SACK+H +++ K LLEL+P YV
Sbjct: 696 GRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYV 755
Query: 106 VLSNVH 111
+LSN +
Sbjct: 756 LLSNAY 761
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M+ EM + ++ +E+TF+ +L AC+ LVE G E FHS+ E+ +VP ++HYGC++DLL
Sbjct: 324 MLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLL 383
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F LW S+C HG V+++ V +R+ EL H YV
Sbjct: 384 GRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYV 443
Query: 106 VLSNV 110
+LSN+
Sbjct: 444 ILSNL 448
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M E+G+R NEVT++AVL+AC+ LV G + F S+ E V+P MEHY C+VD+L
Sbjct: 565 LFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDIL 624
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G LSEA +F+ S AC++HG ++L K ++E +P Y+
Sbjct: 625 GRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYI 684
Query: 106 VLSNVH 111
+LSN++
Sbjct: 685 LLSNLY 690
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ + G + +E+TFV VL+AC A LV++GLE FHS+ + +V +HY CV+DLL R
Sbjct: 387 ESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLAR 446
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G EA ++FLW++ C+IHG ++L+ K L EL+PE+ Y+ L
Sbjct: 447 SGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITL 506
Query: 108 SNVH 111
SN++
Sbjct: 507 SNIY 510
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M ++ N VTF+ VL+ACA LV+ GLELF ++ ++ + P ++HYGC+VDLL
Sbjct: 394 LFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLL 453
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F L+S C IH A +L +G L++LQP H RY+
Sbjct: 454 GRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYI 513
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 514 LLANLYS 520
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M ++ N VTF+ VL+ACA LV+ GLELF ++ ++ + P ++HYGC+VDLL
Sbjct: 394 LFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLL 453
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F L+S C IH A +L +G L++LQP H RY+
Sbjct: 454 GRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYI 513
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 514 LLANLYS 520
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G R N VTFV+VL+AC+ + +E+GL+LFHS++ +F V P + HY C+VDLL R
Sbjct: 638 QMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARG 697
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA EF L S+C+ + K + + ++L +L+P + YV+LS
Sbjct: 698 GCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLS 757
Query: 109 NVH 111
NV+
Sbjct: 758 NVY 760
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 543 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 602
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF+ S AC++HG +L + +LE +P+ Y+
Sbjct: 603 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 662
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 663 LLSNLH 668
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M+D+M G + +++TFV +L AC+ + LV+ GL F S+ ++ +VP EHY C++DLL
Sbjct: 413 MLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLL 472
Query: 61 GRAGLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG E ++ +W+A C+IHG ++L + +RL+EL+P+ YV
Sbjct: 473 GRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYV 532
Query: 106 VLSNVHT 112
+LS+++
Sbjct: 533 LLSSIYA 539
>gi|297834808|ref|XP_002885286.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331126|gb|EFH61545.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 471
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 22/132 (16%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++D M E G++ NEVTF ++L+A LV+ G+ELF S+ F V P+++HYGC+VDLL
Sbjct: 309 LLDRMAESGIKPNEVTFTSLLSAYRHIGLVQEGIELFKSMRTRFGVTPVIQHYGCIVDLL 368
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPE------ 99
G+AG + EA EF L +AC I+G + E+GK LLE++ E
Sbjct: 369 GKAGRIQEAYEFVLAMPIKPDTILLRSLCNACSIYGETAMGEEIGKALLEIEREEEKLSG 428
Query: 100 -HCRRYVVLSNV 110
C YV LSN+
Sbjct: 429 SECEDYVALSNM 440
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++GL + V F +LTAC+R L+E G F ++ ++ VVP HY C+VDLL
Sbjct: 388 LFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLL 447
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L A + L S ACK+HG V+L EV RLLEL+PE YV
Sbjct: 448 SRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLELEPEKAGSYV 507
Query: 106 VLSNVH 111
+LSN++
Sbjct: 508 LLSNIY 513
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G R N VTFV+VL+AC+ + +E+GL+LFHS++ +F V P + HY C+VDLL R
Sbjct: 651 QMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARG 710
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA EF L S+C+ + K + + ++L +L+P + YV+LS
Sbjct: 711 GCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLS 770
Query: 109 NVH 111
NV+
Sbjct: 771 NVY 773
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 76/122 (62%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+ + +++LG +F S+ ++ + P +EHYGC++DLLG +G
Sbjct: 405 MRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSG 464
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACKIHG ++L K+L++++PE+ YV+LSN
Sbjct: 465 LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSN 524
Query: 110 VH 111
++
Sbjct: 525 IY 526
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + ++ +E T V++ACA++ +ELG ++ HS + + ++ ++DL
Sbjct: 194 LFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQV-HSWINDHGFGSNLKIVNALIDLY 252
Query: 61 GRAGLLSEANEFL 73
+ G + A E L
Sbjct: 253 SKCGEVETACELL 265
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 295 MFHQMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 354
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF L AC +HG +L + +LE +P+ Y+
Sbjct: 355 GRSGLLVEAMEFINSMPLMADALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYI 414
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 415 LLSNLH 420
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R + + F+++L AC+ A L+E G E F+ + + + P +EHYGC+VDL GRA
Sbjct: 361 EMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRA 420
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A EF +W AC IHG VKL+ V +RL EL P + +V+LS
Sbjct: 421 GQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLS 480
Query: 109 NVH 111
N++
Sbjct: 481 NIY 483
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+++EM +G+R N+ TFV VL+ CA A L E G EL S++ ++ P +EHYGC+VDLL
Sbjct: 328 LLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDLL 387
Query: 61 GRAGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GR+G + EA N LW SAC+ HG V+L+H K L++L+P + Y
Sbjct: 388 GRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGNY 447
Query: 105 VVLSNVHT 112
V+LSN++
Sbjct: 448 VLLSNMYA 455
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E G + NE+T+VAVL+AC+ ++ G + F+S+ E +VP MEHY C+VDLL
Sbjct: 525 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 584
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA EF+ S AC++HG +L + +LE +P+ Y+
Sbjct: 585 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 644
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 645 LLSNLH 650
>gi|297733980|emb|CBI15227.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R + + F+++L AC+ A L+E G E F+ + + + P +EHYGC+VDL GRA
Sbjct: 197 EMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRA 256
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A EF +W AC IHG VKL+ V +RL EL P + +V+LS
Sbjct: 257 GQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLS 316
Query: 109 NVH 111
N++
Sbjct: 317 NIY 319
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G + +++TFV VL+AC +A VELG F S+ ++ + P ++HYGC++DLL
Sbjct: 452 LFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLL 511
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G EA + +W +AC+IHG V+ V +RL EL+PE+ YV
Sbjct: 512 ARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYV 571
Query: 106 VLSNVH 111
+LSN++
Sbjct: 572 LLSNIY 577
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +G +++TFV VLTAC A L+ LG F S++ +++V P + HYGC++DL
Sbjct: 452 LFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLF 511
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL EA L AC+IH ++L+ V K L EL+PE+ YV
Sbjct: 512 GRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYV 571
Query: 106 VLSNVH 111
+LSN++
Sbjct: 572 LLSNIY 577
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G++ + +TFV L+ACA A L+E GL F S+ EF + P MEHYGC+VDL GRA
Sbjct: 706 QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRA 764
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EA EF L AC++H V+L+ + ++ LEL P +V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 109 NVH 111
N++
Sbjct: 825 NIY 827
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL 41
++M + ++ ++ TFV++L ACA AR V+ G EL++ +L
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLIL 238
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G++ + +TFV L+ACA A L+E GL F S+ EF + P MEHYGC+VDL GRA
Sbjct: 706 QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRA 764
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EA EF L AC++H V+L+ + ++ LEL P +V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 109 NVH 111
N++
Sbjct: 825 NIY 827
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL 41
++M + ++ ++ TFV++L ACA AR V+ G EL++ +L
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLIL 238
>gi|42564994|ref|NP_188527.2| mitochondrial editing factor 20 [Arabidopsis thaliana]
gi|75273478|sp|Q9LJ69.1|PP243_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18970
gi|9280314|dbj|BAB01693.1| unnamed protein product [Arabidopsis thaliana]
gi|134031924|gb|ABO45699.1| At3g18970 [Arabidopsis thaliana]
gi|332642654|gb|AEE76175.1| mitochondrial editing factor 20 [Arabidopsis thaliana]
Length = 472
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 22/132 (16%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+++ M E G++ NE+TF ++L+A LVE G+ELF S+ F V P++EHYGC+VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPE------ 99
G+AG + EA +F L +AC I+G + E+GK LLE++ E
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 100 -HCRRYVVLSNV 110
C YV LSNV
Sbjct: 430 SECEDYVALSNV 441
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +KG+ NEVTF+A+L+AC+ LVE GL +F S+ ++ + EHY C+VDLL
Sbjct: 545 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLL 604
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A EF L AC++H + + +RL EL P++ YV
Sbjct: 605 GRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYV 664
Query: 106 VLSNVH 111
++SN++
Sbjct: 665 IMSNIY 670
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G++ N +TF+++LT C+ A LVE GL+ F+S+ + VVP EHY CV+DLL
Sbjct: 332 IFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL 391
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ W AC+IHG ++ ++L++L+P++ V
Sbjct: 392 GRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV 451
Query: 106 VLSNVH 111
+LSN++
Sbjct: 452 LLSNIY 457
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLG-EFEVVPIMEHYGCVVDLLGR 62
E+ +G+ NE TF +++ ACA +E G +L ++ F+ P + +VD+ G+
Sbjct: 234 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGK 291
Query: 63 AGLLSEA 69
GLL +A
Sbjct: 292 CGLLEQA 298
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ + NEVTFV VL C+ + LVE G ++F S+ E+ + P +EHYGC+VDL GRA
Sbjct: 438 QMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRA 497
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL EA N +W SAC++HG ++L KR+L+L+P+H V++S
Sbjct: 498 NLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMS 557
Query: 109 NVH 111
N++
Sbjct: 558 NIY 560
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+GL ++VT+V+VL+AC+ + LV+ GL+LF + E+ + P M+HYGC+VDL GRA
Sbjct: 325 EMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRA 384
Query: 64 GLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL E AN+ LW SACK+H +KL + L L + Y+VLS
Sbjct: 385 GLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLS 444
Query: 109 NVH 111
N++
Sbjct: 445 NMY 447
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
DEM+ KG++ + +TFV VL AC+ A V+ G+ F+S+ + + P +EHYG +VD+LGR
Sbjct: 378 DEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGR 437
Query: 63 AGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG ++EA E + S AC+IHG ++ + K+LLE+ P H YV+L
Sbjct: 438 AGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLL 497
Query: 108 SNVH 111
SN++
Sbjct: 498 SNIY 501
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +EM +G+R +E+TF+ +L AC+ A LVE G F+S+ + + P ++HYGC+VDLL
Sbjct: 319 MFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLL 378
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F LW SAC HG V+++ V +R+ EL H YV
Sbjct: 379 GRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYV 438
Query: 106 VLSNVH 111
+LSN++
Sbjct: 439 ILSNLY 444
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M + +R +E+TFVAVL AC+ +V+ G E F+ + ++ V P ++HYGC+VD+L
Sbjct: 335 MFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDML 394
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L SAC++HG ++L+ ++LL+ + + YV
Sbjct: 395 GRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYV 454
Query: 106 VLSNVH 111
+LSN++
Sbjct: 455 LLSNIY 460
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ E+ KGL +E+TFV VL AC+ +V+ G + F + E+ +VP +EHYGC+VDLL
Sbjct: 329 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLL 388
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ +A+EF+ W AC IHG + L +LL+L+P+H YV
Sbjct: 389 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYV 448
Query: 106 VLSNVH 111
+LSN++
Sbjct: 449 LLSNLY 454
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 79/127 (62%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M L ++VTF+A+L AC+ A LV+ GL +F ++ +F++ P MEHYGCVVDLL
Sbjct: 200 LFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLL 259
Query: 61 GRAGLLSE-----------ANEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RA + + AN LW+ AC+ G L+ ++ +R++EL+P+ C RYV
Sbjct: 260 CRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYV 319
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 320 MLSNLYA 326
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G++ N+VTF+ VL AC+ LVE GL F S+ E+ + P +HY CV+D+
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F+ W SACK+H +++ K LLEL+P YV
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754
Query: 106 VLSNVH 111
+LSN +
Sbjct: 755 LLSNAY 760
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N+ T+ +L C R ++LG E HSL + M G ++D+ +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 64 GLLSEANEFL 73
G L +A L
Sbjct: 394 GWLEKARRVL 403
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +KG+ NEVTF+A+L+AC+ LVE GL +F S+ ++ + EHY C+VDLL
Sbjct: 801 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLL 860
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A EF L AC++H + + +RL EL P++ YV
Sbjct: 861 GRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYV 920
Query: 106 VLSNVH 111
++SN++
Sbjct: 921 IMSNIY 926
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G++ N +TF+++LT C+ A LVE GL+ F+S+ + VVP EHY CV+DLL
Sbjct: 397 IFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL 456
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ W AC+IHG ++ ++L++L+P++ V
Sbjct: 457 GRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV 516
Query: 106 VLSNVH 111
+LSN++
Sbjct: 517 LLSNIY 522
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLG-EFEVVPIMEHYGCVVDLLGR 62
E+ +G+ NE TF +++ ACA +E G +L ++ F+ P + +VD+ G+
Sbjct: 299 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGK 356
Query: 63 AGLLSEA 69
GLL +A
Sbjct: 357 CGLLEQA 363
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G++ N++TF+ +L AC+ A LV G +LF ++ F +VP +EHYGC+VDLLGRA
Sbjct: 490 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 549
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W +AC++H +L +LLE++PE+C V++S
Sbjct: 550 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 609
Query: 109 NVH 111
N++
Sbjct: 610 NIY 612
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G++ N+VTF+ VL AC+ LVE GL F S+ E+ + P +HY CV+D+
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F+ W SACK+H +++ K LLEL+P YV
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754
Query: 106 VLSNVH 111
+LSN +
Sbjct: 755 LLSNAY 760
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N+ T+ +L C R ++LG E HSL + M G ++D+ +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 64 GLLSEANEFL 73
G L +A L
Sbjct: 394 GWLEKARRVL 403
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G++ N+VTF+ VL AC+ LVE GL F S+ E+ + P +HY CV+D+
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F+ W SACK+H +++ K LLEL+P YV
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754
Query: 106 VLSNVH 111
+LSN +
Sbjct: 755 LLSNAY 760
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N+ T+ +L C R ++LG E HSL + M G ++D+ +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 64 GLLSEANEFL 73
G L +A L
Sbjct: 394 GWLEKARRVL 403
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R +EVTFV +L+AC+ A L++ GL F+S+ E+ + P+ EHY C+VDLLGRA
Sbjct: 547 EMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRA 606
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA E L AC +H +L+ +RL EL+P YV+LS
Sbjct: 607 GKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLLS 666
Query: 109 NV 110
N+
Sbjct: 667 NI 668
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M + G + VTFVAVL+AC+ A LV G ELF ++ EF V P MEHY C+VDLLGR
Sbjct: 1339 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 1398
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA N +W A C++H +++ E ++ L E Y++L
Sbjct: 1399 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLL 1458
Query: 108 SNVH 111
SN++
Sbjct: 1459 SNIY 1462
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 16/122 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G + +E+TFV VL+AC+ A LV+ G +LF S+ + + P EHY C+VD+LGRAG
Sbjct: 378 MLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAG 437
Query: 65 LLSEANEFLWS----------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
+ EA + +W AC++HG V+++ +G++L+ELQP YV+L+
Sbjct: 438 QVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLA 497
Query: 109 NV 110
NV
Sbjct: 498 NV 499
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 19/128 (14%)
Query: 4 EMYEKGLR----ANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
EM+ + +R +EVTF+ VLTAC A LV+ G E F S++ + + P + HYGC++DL
Sbjct: 342 EMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDL 401
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG ++EA N +W +AC++HG ++ V +RLLEL PE+ Y
Sbjct: 402 LGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVY 461
Query: 105 VVLSNVHT 112
++LSN++
Sbjct: 462 ILLSNIYA 469
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 15/117 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G N +TF+A+LT C+ + L+ G LF + + + P ++HYGC+VDLLGRAGL+ E
Sbjct: 370 GPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKE 429
Query: 69 ANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A +F LW AC+IHG V+L E+GKRL++L+P H RY +L N+
Sbjct: 430 ALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNI 486
>gi|296087990|emb|CBI35273.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 15/117 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G N +TF+A+LT C+ + L+ G LF + + + P ++HYGC+VDLLGRAGL+ E
Sbjct: 256 GPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKE 315
Query: 69 ANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A +F LW AC+IHG V+L E+GKRL++L+P H RY +L N+
Sbjct: 316 ALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNI 372
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G++ + +TFV L+ACA A L++ GL F S+ +F + P MEHYGC+VDL GRA
Sbjct: 700 QMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRA 758
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF LW AC++H V+L+ +V ++ LEL P YV+LS
Sbjct: 759 GLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILS 818
Query: 109 NVH 111
N++
Sbjct: 819 NIY 821
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL 41
++M + G++ ++ TFV +L ACA A+ V+ G ELF +L
Sbjct: 194 EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLIL 232
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++G++ N +TF+++LT C+ A LVE GL+ F+S+ + VVP EHY CV+DLLGR
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 458
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA EF+ W AC+IHG ++ ++L++L+P++ V+L
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLL 518
Query: 108 SNVH 111
SN++
Sbjct: 519 SNIY 522
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E L+ +EVTFV VL+AC+ A V G + +++V P +EHY CV+D+L
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L +AC++H L+ +R+ EL+PEHC YV
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYV 551
Query: 106 VLSNVH 111
++SNV+
Sbjct: 552 LMSNVY 557
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+R N +TFV+VL AC+ A L ++G F+++ G F V P +EHYGC+VDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A + +WS AC+IH V+L+ RL EL P +C Y++LS+
Sbjct: 439 FLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSH 498
Query: 110 VH 111
++
Sbjct: 499 IY 500
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++ + NE+T AV++AC+RA LV+ G E+F + +F++ P +HYGC+VDLL
Sbjct: 584 LFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLL 643
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ S ACK H V+L+ +LEL+P + Y+
Sbjct: 644 GRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYI 703
Query: 106 VLSNVH 111
LSN++
Sbjct: 704 TLSNIY 709
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ + N +TFV VL AC+ A LVE G ++F+S++ E + P HYGC+VDL GRA
Sbjct: 446 QMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRA 505
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL EA N +W +AC++HG ++L KRLLEL P+H +V LS
Sbjct: 506 NLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLS 565
Query: 109 NVH 111
N++
Sbjct: 566 NIY 568
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N +TFV+VL AC+ A LVE G F+++ ++++ P +EHYGC+VDL GRA
Sbjct: 1444 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 1503
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA L AC+IH V L ++L EL P++C YV+LS
Sbjct: 1504 GCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLS 1563
Query: 109 NVH 111
N++
Sbjct: 1564 NLY 1566
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++ + +TF+ VL AC + V+ G F + + + PI EHY C+ +L
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELY 404
Query: 61 GRAGLLSEA 69
R+ L EA
Sbjct: 405 ARSNNLDEA 413
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M E+GL+ + V FV LTAC+ LV+ G E+F+S+L V P HYGC+VDLL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++ G V+++ +++ L PE YV
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYV 677
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 678 LLSNVY 683
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G+ +++T V +L+AC+ + L++LG +F S+ ++ + P +EHYGC++DLL
Sbjct: 407 LFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLL 466
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G AGL EA E +W ACK+HG ++L+ ++L+E++PE+ YV
Sbjct: 467 GHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYV 526
Query: 106 VLSNVH 111
+LSN++
Sbjct: 527 LLSNIY 532
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G++ N +TFV+VL AC+ A L+E G F ++ EF+V P +EHYGC+VDLLGRA
Sbjct: 300 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 359
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + + W AC++H V L ++L EL P++C YV+LS
Sbjct: 360 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 419
Query: 109 NVHT 112
N++
Sbjct: 420 NIYA 423
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E ++ + +TF+++L AC+ A LV+LG F ++ + + P++EHYGC+VDL
Sbjct: 357 LFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLY 416
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A N+ +W AC IHG + L+ +V ++L EL PE+ +V
Sbjct: 417 GRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHV 476
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 477 LLSNIYA 483
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ +G+R NEV+ VL+ACA+A E G + H + + + I+ ++D +
Sbjct: 259 EVRREGMRPNEVSLTGVLSACAQAGAFEFG-RILHGFVEKSGFLQIISVNNALIDTYSKC 317
Query: 64 GLLSEA 69
G L A
Sbjct: 318 GNLDMA 323
>gi|242072952|ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
gi|241937595|gb|EES10740.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
Length = 317
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++GL+ N+VTF+ VL AC+ LVE GL F S+ + + P +HY CVVD+L
Sbjct: 33 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPTPDHYACVVDIL 92
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A F +W SACK+H +++ K LLEL+P YV
Sbjct: 93 GRAGQLDRARRFVDEMPITADAMVWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYV 152
Query: 106 VLSNVH 111
+LSN +
Sbjct: 153 LLSNAY 158
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G R N VTFVAVL+ACA A LV+ G ++F ++ E+ +VP +EH C+VD+L
Sbjct: 307 LFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDML 366
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L+EA +F+ W+ ACK+H L EV + LL ++PE+ Y
Sbjct: 367 GRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHY 426
Query: 105 VVLSNVH 111
V+LSN++
Sbjct: 427 VMLSNIY 433
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N +TFV+VL AC+ A LVE G F+++ ++++ P +EHYGC+VDL GRA
Sbjct: 2317 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 2376
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA L AC+IH V L ++L EL P++C YV+LS
Sbjct: 2377 GCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLS 2436
Query: 109 NVH 111
N++
Sbjct: 2437 NLY 2439
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++ + +TF+ VL AC + V+ G F + + + PI EHY C+ +L
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELY 404
Query: 61 GRAGLLSEA 69
R+ L EA
Sbjct: 405 ARSNNLDEA 413
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M GL +E TFV+VL AC+ A +V GL++F+ ++ +P ++HY CV+D+LGRA
Sbjct: 416 QMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRA 475
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A F L AC+IHG +KL HE+ +++ E++P YV+LS
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLS 535
Query: 109 NVH 111
N++
Sbjct: 536 NMY 538
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M + +R +E+TFVAVL AC+ +V+ G E F+ + ++ V P ++HYGC+VD+L
Sbjct: 335 MFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDML 394
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF +W SAC++HG ++L+ ++LL+ + + YV
Sbjct: 395 GRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYV 454
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 455 LLSNIYA 461
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M E G + + + F A+LTAC+ A LV+ GL+ F + ++ + P +EHY C+VDLL
Sbjct: 511 LFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLL 570
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EAN L AC+IH ++L + K L EL P++ YV
Sbjct: 571 GRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYV 630
Query: 106 VLSNVH 111
+LSN++
Sbjct: 631 LLSNIY 636
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +GL ++V F +LTAC+RA LV+ G F S+ ++ +VP +HY C+VDLL
Sbjct: 406 LFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLL 465
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L S ACK+H ++L V +L EL+P++ YV
Sbjct: 466 GRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYV 525
Query: 106 VLSNVH 111
+LSN++
Sbjct: 526 LLSNIY 531
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G++ N VTF+ +L AC+ +VE G + F S+ ++ +VP +EHYGC+VDL
Sbjct: 333 LFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLF 392
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W A CK+H VKL+ E + L +L P + YV
Sbjct: 393 SRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYV 452
Query: 106 VLSNVH 111
VLSN++
Sbjct: 453 VLSNIY 458
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M E+GL+ + V FV LTAC+ LV+ G E+F+S+L V P HYGC+VDLL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++ G V+++ +++ L PE YV
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYV 677
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 678 LLSNVY 683
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 16/122 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G + +E+TFV VL+AC+ A LV+ G +LF S+ + + P EHY C+VD+LGRAG
Sbjct: 472 MLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAG 531
Query: 65 LLSEANEFLWS----------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
+ EA + +W AC++HG V+++ +G++L+ELQP YV+L+
Sbjct: 532 QVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLA 591
Query: 109 NV 110
NV
Sbjct: 592 NV 593
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 79/129 (61%), Gaps = 18/129 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + G+R +++TF+ VL+AC+ LVE G + F+S+ E+++ P +EHYGC+VDLL
Sbjct: 458 LFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLL 517
Query: 61 GRAGLLSEANEF------------------LWSACKIHGAVKLSHEVGKRLLELQPEHCR 102
GRAGLL+EA E L SAC+I+G V++ V K+L++ +
Sbjct: 518 GRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSS 577
Query: 103 RYVVLSNVH 111
+ +L+N++
Sbjct: 578 VHTLLANIY 586
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E GL +E T V+ L+AC + +ELG ++ H + + PI+ + ++D+ + G L
Sbjct: 232 ESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCL 289
Query: 67 SEA 69
S A
Sbjct: 290 SIA 292
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 79/123 (64%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G++ NE+TF++VL+AC+ A LV+ G + ++ + ++ + P +EHY C+VDLLGRA
Sbjct: 31 QMQQRGVKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRA 90
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA +F+ W A C+IH ++L V + LL L P++ YV+LS
Sbjct: 91 GHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLS 150
Query: 109 NVH 111
N++
Sbjct: 151 NIY 153
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G++ N +TFV+VL AC+ A L+E G F ++ EF+V P +EHYGC+VDLLGRA
Sbjct: 454 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 513
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + + W AC++H V L ++L EL P++C YV+LS
Sbjct: 514 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 573
Query: 109 NVHT 112
N++
Sbjct: 574 NIYA 577
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M + G+R N V F+++L+AC+ + LVE GLE F ++ ++ +VP ++HYGCV+D+LGR
Sbjct: 340 EKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGR 399
Query: 63 AGLLSE------------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L E AN+ +W AC +H V++ V K++LE++ H YV+
Sbjct: 400 AGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVL 459
Query: 107 LSNV 110
+SN+
Sbjct: 460 MSNI 463
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G++ TFV +L ACA A LV GLE F S+ +VP M+HYGCVVDLL
Sbjct: 314 LFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLL 373
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G + +A EF L SACK+HG V L+ KRLLEL P YV
Sbjct: 374 SRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYV 433
Query: 106 VLSNVH 111
+LSN +
Sbjct: 434 LLSNTY 439
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E L+ +EVTFV VL+AC+ A V G + +++V P +EHY CV+D+L
Sbjct: 352 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDML 411
Query: 61 GRAGLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EAN +W +AC++H L+ +R+ EL+PEHC YV
Sbjct: 412 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYV 471
Query: 106 VLSNVH 111
++SNV+
Sbjct: 472 LMSNVY 477
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R +EVTFV VL+AC+ A L++ G + F+S+ ++ + P+ EHY C+VDLLGR+
Sbjct: 541 EMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRS 600
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LSEA E + W AC++H +L+ ++L EL+P YV+LS
Sbjct: 601 GRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLS 660
Query: 109 NV 110
N+
Sbjct: 661 NI 662
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +GL ++V F +LTAC+RA LV+ G F S+ ++ +VP +HY C+VDLL
Sbjct: 405 LFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLL 464
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L S ACK+H ++L V +L EL+P++ YV
Sbjct: 465 GRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYV 524
Query: 106 VLSNVH 111
+LSN++
Sbjct: 525 LLSNIY 530
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+GL N TFV VL+AC+RA LV G+++FHS+ + V P +EHY CVVDLL
Sbjct: 515 LFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLL 574
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G + EA EF+ W SAC +++ V +++ P+ YV
Sbjct: 575 GRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYV 634
Query: 106 VLSNVH 111
+LSN++
Sbjct: 635 ILSNIY 640
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 80/123 (65%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G+ +E+T++ +L AC + LV++GL++F+ ++ + P M+HYGC+VDLLGRA
Sbjct: 390 KMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRA 449
Query: 64 GLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL + A+ +W SACK+H V+L +VG+ L++++P++ YV+ S
Sbjct: 450 GLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFS 509
Query: 109 NVH 111
NV+
Sbjct: 510 NVY 512
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G++ N VTF+ +L AC+ +VE G + F S+ ++ +VP +EHYGC+VDL
Sbjct: 333 LFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLF 392
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W A CK+H +KL+ E + L +L P + YV
Sbjct: 393 SRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYV 452
Query: 106 VLSNVH 111
VLSN++
Sbjct: 453 VLSNIY 458
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +GL ++V F +LTAC+RA LV+ G F S+ ++ +VP +HY C+VDLL
Sbjct: 391 LFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLL 450
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L S ACK+H ++L V +L EL+P++ YV
Sbjct: 451 GRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYV 510
Query: 106 VLSNVH 111
+LSN++
Sbjct: 511 LLSNIY 516
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G++ NEVT+VA+L+AC+ LV G F+S+ + ++ P MEHY C+VDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL++A EF+ W AC++H +L +++LEL P Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 108 SNVH 111
SN++
Sbjct: 684 SNIY 687
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 VDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+D M G+R + VTF ++L +C RAR LG +L H+ L EF++ P Y ++ L
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG-KLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 61 GRAGLLSEANE 71
++G ++A +
Sbjct: 108 SKSGDSAKAED 118
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+R + VT V VL+AC+ A L+E G F + + + P EHYGC+VDLL
Sbjct: 427 IFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLL 486
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+SEA F L ACKIH V+L V ++L+E++PE Y+
Sbjct: 487 GRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYI 546
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 547 LMSNIYS 553
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++ L+ N+ TFVAVLTAC + L+E G ELF S+ ++E+ P +EH+GC+VDLLGR
Sbjct: 331 EMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRG 390
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA N LW AC+ HG +KL+ K L+ L+P + YV+LS
Sbjct: 391 GCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLS 450
Query: 109 NV 110
N+
Sbjct: 451 NM 452
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
EK ++ + VT +AVL+ C+ R+ + GL +F ++ GE+ P EHYGC+VD+LGRAG
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 66 LSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA EF L AC++H +V + VG+RL+E++PE+ YV+LSN+
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 111 H 111
+
Sbjct: 469 Y 469
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + NE TF VLT+C RA + LG ++ H L+ ++ + ++D+ +A
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 64 GLLSEANEFL 73
G + EA E
Sbjct: 202 GQIKEAREIF 211
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M + +R +E+TFVAVL AC+ +V+ G E F+ + ++ V P ++HYGC+VD+L
Sbjct: 365 MFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDML 424
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF +W SAC++HG ++L+ ++LL+ + + YV
Sbjct: 425 GRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYV 484
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 485 LLSNIYA 491
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + GL N VTFV VL+AC+ LV GL F S+ E +VP EHY CVVDLL
Sbjct: 705 LFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLL 764
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA LL A EF L SAC +H +++ + LLEL+PE YV
Sbjct: 765 GRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYV 824
Query: 106 VLSNVH 111
+LSN++
Sbjct: 825 LLSNMY 830
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
DEM GL+ + VT + VL AC+ + +++ G+E F+S+ EF V+P EHY C+VDLLGR
Sbjct: 257 DEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGR 316
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L+EA E + W S C+IH V+L K+LLEL E+ Y +L
Sbjct: 317 AGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLL 376
Query: 108 SNVHT 112
SN++
Sbjct: 377 SNIYA 381
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E L+ +EVTFV VL+AC+ A V G + +++V P +EHY CV+D+L
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 61 GRAGLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EAN +W +AC++H L+ +R+ EL+PEHC YV
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYV 551
Query: 106 VLSNVH 111
++SNV+
Sbjct: 552 LMSNVY 557
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+GL N TFV VL+AC+RA LV G+++FHS+ + V P +EHY CVVDLL
Sbjct: 555 LFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLL 614
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G + EA EF+ W SAC +++ V +++ P+ YV
Sbjct: 615 GRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYV 674
Query: 106 VLSNVH 111
+LSN++
Sbjct: 675 ILSNIY 680
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M + +R +E+TFVAVL AC+ +V+ G E F+ + ++ V P ++HYGC+VD+L
Sbjct: 335 MFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDML 394
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF +W SAC++HG ++L+ ++LL+ + + YV
Sbjct: 395 GRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYV 454
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 455 LLSNIYA 461
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G R N VTF+ VL ACA A+LVE GL+ F S+ + + P M+HYGCVVDLLGRAG
Sbjct: 412 MLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAG 471
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A F L +C HG V ++ V K+L EL+P + Y +LSN
Sbjct: 472 QLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSN 531
Query: 110 VH 111
+
Sbjct: 532 AY 533
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
++GL ++TFV VL AC+R LV G F ++ ++ + P MEHYGC+VDLLGRAGL+
Sbjct: 357 DEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLV 416
Query: 67 SEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
SEA E LW SACK H V L VG +L+EL+P H YV+L++++
Sbjct: 417 SEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIY 476
Query: 112 T 112
Sbjct: 477 A 477
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
DEM E+G+ ++V F+ VL+AC+ + LV+ G F+++ F +VP +EHYGC+VD+L R
Sbjct: 423 DEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSR 482
Query: 63 AGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG ++EA N+ +W +AC G +KL V K L+ +P H YV+L
Sbjct: 483 AGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLL 542
Query: 108 SNVH 111
SN++
Sbjct: 543 SNIY 546
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + G R N VTF+ VLTAC L L+LF + ++ +V +EHYGCVVD+L
Sbjct: 319 LFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFGYMSDKYGIVASIEHYGCVVDVL 378
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G + EA EF +W + C +H ++L H+VGK L+EL+P H RYV
Sbjct: 379 ARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHNNIELGHKVGKYLVELEPGHGGRYV 438
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 439 LLSNVY 444
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M GL+ + VTFV VL+AC A LV+ G + F + + + P MEHYGC++DLL
Sbjct: 476 LFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLL 535
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG EAN+ +W SAC+ H + L +V + L+ L P++ YV
Sbjct: 536 GRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYV 595
Query: 106 VLSNVH 111
+LSN++
Sbjct: 596 LLSNIY 601
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M + G + VTFVAVL+AC+ A LV G ELF ++ EF V P MEHY C+VDLLGR
Sbjct: 501 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 560
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA N +W A C++H +++ E ++ L E Y++L
Sbjct: 561 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLL 620
Query: 108 SNVHT 112
SN++
Sbjct: 621 SNIYA 625
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ M + G+ +++TFV +L+AC+ A L +LG ++F S+ ++ + P +EHYGC++DLL
Sbjct: 401 LLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLL 460
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GL EA E L ACKIH ++L + ++L++++P++ YV
Sbjct: 461 GRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYV 520
Query: 106 VLSNVH 111
+LSN++
Sbjct: 521 LLSNIY 526
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + +R ++VTFV +L AC +V G +LF S+ +F+V P +EHYGC+VDLL
Sbjct: 304 LYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLL 363
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + +W AC HG V+L + L +L+P + YV
Sbjct: 364 GRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYV 423
Query: 106 VLSNVH 111
+LSN++
Sbjct: 424 ILSNIY 429
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++GL+ ++VTFV VLTAC+ LVE GL F S+ E + P +HY CVVD+L
Sbjct: 635 LFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDIL 694
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A F +W SACK+H +++ K LLEL+P YV
Sbjct: 695 GRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYV 754
Query: 106 VLSNVHT 112
+LSN +
Sbjct: 755 LLSNAYA 761
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+ NE+TFVAVL AC LV+ G F+S++ E ++ P ++HYGC+VDLLGRA
Sbjct: 512 EMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRA 571
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G+L EA E + S ACK +G + +G++L+EL P+H V+LS
Sbjct: 572 GMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLS 631
Query: 109 NVH 111
N++
Sbjct: 632 NIY 634
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ +++TFV +L+AC+ + +++LG +F S+ +E+ P +EHYGC++DLLG +G
Sbjct: 419 MRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSG 478
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACKIHG ++L K+L++++P + YV+LSN
Sbjct: 479 LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSN 538
Query: 110 VH 111
++
Sbjct: 539 IY 540
>gi|147796458|emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]
Length = 437
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 15/106 (14%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++DEM G++ N VTF ++ +AC A LVE GL+LFHS+ +F V P ++HYGC+VDLL
Sbjct: 270 LLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLL 329
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGK 91
GRAG L EA +F LW SACK+H V + EVGK
Sbjct: 330 GRAGHLKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGK 375
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E L+ +EVTFV VL+AC+ A V G + +++V P +EHY CV+D+L
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 61 GRAGLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EAN +W +AC++H L+ +R+ EL+PEHC YV
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYV 551
Query: 106 VLSNVH 111
++SNV+
Sbjct: 552 LMSNVY 557
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M + G + VTFVAVL+AC+ A LV G ELF ++ EF V P MEHY C+VDLLGR
Sbjct: 501 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 560
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA N +W A C++H +++ E ++ L E Y++L
Sbjct: 561 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLL 620
Query: 108 SNVHT 112
SN++
Sbjct: 621 SNIYA 625
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+ + +++LG +F S+ +++ P +EHYGC++DLLG G
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLG 489
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+HG V+L ++L++++PE+ YV+LSN
Sbjct: 490 LFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSN 549
Query: 110 VH 111
++
Sbjct: 550 IY 551
>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E+ ++ +E+TF VLTAC+ A LV+ G +F+S+ + V+P EHYGC+VDLL
Sbjct: 641 MFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLL 700
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L + +F L SAC+ HG +L+H + K LLE P++ Y
Sbjct: 701 GRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQNPGIYA 760
Query: 106 VLSNVH 111
++S V+
Sbjct: 761 LISEVY 766
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGL-RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ EM KGL R +++TFV VL+AC +A LV+LG + F S++ ++ + P ++HYGC++DL
Sbjct: 453 LFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDL 512
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RA EA + +W SACK HG V+ V +RL +L+PE+ +
Sbjct: 513 LARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAF 572
Query: 105 VVLSNVH 111
V+LSN++
Sbjct: 573 VLLSNIY 579
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ N++TF+ L AC+ + L++ G LFH ++ EF P +EHYGC+VDLL
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLL 576
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA+E + S ACK+H +KL K+ L L+P V
Sbjct: 577 GRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNV 636
Query: 106 VLSNVH 111
++SN++
Sbjct: 637 LMSNIY 642
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G +VTF AVL+AC+ LVE GLE++ ++ + + P +EHYGC+VD+LGRA
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA F L ACKI+ +++ VG L++++PEH YV+LS
Sbjct: 400 GKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLS 459
Query: 109 NVH 111
N++
Sbjct: 460 NIY 462
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + ++ N TF+AVL AC LVE GL FHS+L + + P +EHY CVVD++GR+G
Sbjct: 607 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 666
Query: 65 LLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+S EA+ +W S CKIHG V+++ + +L+L+PE YV+LSN
Sbjct: 667 QVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 726
Query: 110 VH 111
++
Sbjct: 727 IY 728
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M GL+ + VTF+ VL+AC+RA LVE GL+ F S++ E ++PI++H C++DLL
Sbjct: 459 LFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLL 518
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F L S+C++HG +++ L+ L+P++ YV
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYV 578
Query: 106 VLSNVH 111
+LS+++
Sbjct: 579 LLSSLY 584
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 82/123 (66%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRA 63
M ++G++A+EVT +AVL AC+ + +V++G ++F SL+ G++E P ++HY CV+DLL RA
Sbjct: 302 MEQEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARA 361
Query: 64 GLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G+L EA N+ +W A C+ HG ++LS ++L+EL+P + YV+LS
Sbjct: 362 GILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLLS 421
Query: 109 NVH 111
N++
Sbjct: 422 NIY 424
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E+ GL VTFV VL C+R+ LV G F ++ ++ + P MEHYGC+VDL
Sbjct: 366 ELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDL 425
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAGL+ EA E LW S+CK HG V L VG +L+EL P H Y
Sbjct: 426 LGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYY 485
Query: 105 VVLSNVHT 112
V+LS ++
Sbjct: 486 VLLSGIYA 493
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D + G R + VTFV VL+ACA A LV+ GL +FHS+ E+ + +HY CV+DLL R
Sbjct: 353 DMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSR 412
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+GL A N+FLW++ C+IH V+L+ + L E++PE+ YV L
Sbjct: 413 SGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTL 472
Query: 108 SNVH 111
+N++
Sbjct: 473 ANIY 476
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 15/106 (14%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++DEM G++ N VTF ++ +AC A LVE GL+LFHS+ +F V P ++HYGC+VDLL
Sbjct: 304 LLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLL 363
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGK 91
GRAG L EA +F LW SACK+H V + EVGK
Sbjct: 364 GRAGHLKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGK 409
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +GL+ N VTFV +L C+ A +VE GL F S+ + VVP EHY CV+DLLGRAG
Sbjct: 471 MIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAG 530
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA +F+ W ACKIHG ++ + +L++L+PE+ +V+LSN
Sbjct: 531 KLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSN 590
Query: 110 VH 111
++
Sbjct: 591 IY 592
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G+ +++TFV +L+AC+ + +++LG +F S+ ++++ P +EHYGC++DLL
Sbjct: 387 LFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLL 446
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G +GL EA E +W ACK+HG V+L+ + L++++PE+ Y+
Sbjct: 447 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYI 506
Query: 106 VLSNVH 111
+LSN++
Sbjct: 507 LLSNIY 512
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + +R +E T+V VL+ACA + +ELG ++ HS + + ++ ++DL
Sbjct: 183 LFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQV-HSWVDDHGFDSNLKIVNALIDLY 241
Query: 61 GRAG 64
+ G
Sbjct: 242 SKCG 245
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++GL+ N+VTF+ VL AC+ LVE GL F S+ E + P +HY CVVD+L
Sbjct: 635 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDIL 694
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F +W SAC++H +++ K LLEL+P YV
Sbjct: 695 GRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYV 754
Query: 106 VLSNVHT 112
+LSN +
Sbjct: 755 LLSNAYA 761
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E+ GL VTFV VL C+R+ LV G F ++ ++ + P MEHYGC+VDL
Sbjct: 366 ELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDL 425
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAGL+ EA E LW S+CK HG V L VG +L+EL P H Y
Sbjct: 426 LGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYY 485
Query: 105 VVLSNVHT 112
V+LS ++
Sbjct: 486 VLLSGIYA 493
>gi|222636482|gb|EEE66614.1| hypothetical protein OsJ_23194 [Oryza sativa Japonica Group]
Length = 412
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E+ GL VTFV VL C+R+ LV G F ++ ++ + P MEHYGC+VDL
Sbjct: 97 ELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDL 156
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAGL+ EA E LW S+CK HG V L VG +L+EL P H Y
Sbjct: 157 LGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYY 216
Query: 105 VVLSNVHT 112
V+LS ++
Sbjct: 217 VLLSGIYA 224
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + ++ N TF+AVL AC LVE GL FHS+L + + P +EHY CVVD++GR+G
Sbjct: 670 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 729
Query: 65 LLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+S EA+ +W S CKIHG V+++ + +L+L+PE YV+LSN
Sbjct: 730 QVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 789
Query: 110 VH 111
++
Sbjct: 790 IY 791
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + ++ N TF+AVL AC LVE GL FHS+L + + P +EHY CVVD++GR+G
Sbjct: 623 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 682
Query: 65 LLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+S EA+ +W S CKIHG V+++ + +L+L+PE YV+LSN
Sbjct: 683 QVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 742
Query: 110 VH 111
++
Sbjct: 743 IY 744
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E+ GL VTFV VL C+R+ LV G F ++ ++ + P MEHYGC+VDL
Sbjct: 366 ELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDL 425
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAGL+ EA E LW S+CK HG V L VG +L+EL P H Y
Sbjct: 426 LGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYY 485
Query: 105 VVLSNVHT 112
V+LS ++
Sbjct: 486 VLLSGIYA 493
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + +R N VTF++V++AC+ + LVE GL+ FH + + + P M+HYG +VDLL
Sbjct: 526 LFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLL 585
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA +F+ AC+IH V + +V +RL EL PE +V
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHV 645
Query: 106 VLSNVH 111
+L+N++
Sbjct: 646 LLANIY 651
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G++ TFV +L ACA A LV GLE F S+ +VP M+HYGCVVDLL
Sbjct: 437 LFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLL 496
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G + +A EF L SACK+HG V L+ KRLLEL P YV
Sbjct: 497 SRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYV 556
Query: 106 VLSNVH 111
+LSN +
Sbjct: 557 LLSNTY 562
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G+ +EVTFV +L+AC+ L++ GL+LF ++ + + P+ EHY C+VDLL
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLL 601
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L E AN +W AC+IHG ++L+ ++LLE +P YV
Sbjct: 602 GRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYV 661
Query: 106 VLSNVH 111
+LSN+
Sbjct: 662 LLSNMQ 667
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 76/122 (62%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+ + +++LG +F S+ ++++ P +EHYGC++DLLG +G
Sbjct: 418 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 477
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+HG V+L + L++++PE+ YV+LSN
Sbjct: 478 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSN 537
Query: 110 VH 111
++
Sbjct: 538 IY 539
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M E+G+R N VT++AVL+AC+ LV G + F S+ E V+P MEHY C+VD+L
Sbjct: 565 LFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDIL 624
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G LSEA +F+ S AC++HG ++L K ++E +P Y+
Sbjct: 625 GRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYI 684
Query: 106 VLSNVH 111
+LSN++
Sbjct: 685 LLSNLY 690
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E ++ N +TFV +LTAC A VELGLE F S+ + + P +EH+ C+VDL
Sbjct: 195 LYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLF 254
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L +A EF +W SA +IH V+L+ GK+LLEL+P++ YV
Sbjct: 255 CRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYV 314
Query: 106 VLSNVH 111
+LSN++
Sbjct: 315 ILSNIY 320
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G + +++TFVAVLTAC+ + LV+ G+E+F S+L +FEVVP ++HY C++D L
Sbjct: 607 LYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCL 666
Query: 61 GRAGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G +E E + S+C++H V L+ + L L P + YV
Sbjct: 667 GRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYV 726
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 727 LLANMYS 733
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 19/126 (15%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++EK GL+ ++ TF +L AC+ A LVE GLE F+ +L + P +EHY CVVD+
Sbjct: 498 ELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDM 557
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG + +A + +W S+C+IHG + L +V +LLEL+PE Y
Sbjct: 558 LGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENY 617
Query: 105 VVLSNV 110
V++SN+
Sbjct: 618 VLISNL 623
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E + NEVT V VL+AC A V G + F V+P +EHY CV+D+L
Sbjct: 408 MFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDML 467
Query: 61 GRAGLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +AN +W AC++HG +L+ +++L+L+PEHC YV
Sbjct: 468 GRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYV 527
Query: 106 VLSNVH 111
++SNV+
Sbjct: 528 LMSNVY 533
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM E G+ ++V F+ VL+AC+ + LV+ G F S+ F +VP +EHYGC+VDLL
Sbjct: 316 LFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLL 375
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G + EA EF +W +AC G +KL + K L++ +P H YV
Sbjct: 376 CRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYV 435
Query: 106 VLSNVH 111
+LSN++
Sbjct: 436 LLSNIY 441
>gi|224125946|ref|XP_002329756.1| predicted protein [Populus trichocarpa]
gi|222870664|gb|EEF07795.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
M E+ L A +++TF+ VL+AC+ +V+ G F + E+ + P ++HYGC+VD+LGRA
Sbjct: 1 MLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRA 60
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA N +W +AC++HG V+L +V K+LLEL+P+H YV+L+
Sbjct: 61 GFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVPKQLLELEPDHSSDYVLLA 120
Query: 109 NVHT 112
N +
Sbjct: 121 NTYA 124
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ M E+ L A +++TF+ VL+AC+ +V+ G F + E+ + P ++HYGC+VD+
Sbjct: 277 LFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDI 336
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG + EA N +W +AC++HG V+L +V K+LLEL+P+H Y
Sbjct: 337 LGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDY 396
Query: 105 VVLSNVHT 112
V+L+N +
Sbjct: 397 VLLANTYA 404
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M + G+ +E TFV +L+AC+ ++ G HS + I E ++D+
Sbjct: 176 MFSRMLKFGIEPDEATFVVILSACSALGALDFG-RWVHSCISNIGHGCITEVNNSLLDMY 234
Query: 61 GRAGLLSEANEFL 73
+ G L EA E
Sbjct: 235 AKCGALQEAFEIF 247
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+ + +++LG +F S+ ++++ P +EHYGC++DLLG +G
Sbjct: 430 MRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSG 489
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+HG V+L + L++++P++ YV+LSN
Sbjct: 490 LFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSN 549
Query: 110 VH 111
++
Sbjct: 550 IY 551
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G++ N VTF+ +L AC+ L++ G F S+ ++ V+P +EHYGCVVDL
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W A CK+H + L+ E K L EL P + YV
Sbjct: 290 SRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYV 349
Query: 106 VLSNVHT 112
V+SN++
Sbjct: 350 VISNIYA 356
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E ++ N +TFV ++TAC A VELGLE F S+ + + P +EH+ C+VDL
Sbjct: 417 LYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLF 476
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L +A EF L SA +IH V+L+ GK+LLEL+P++ YV
Sbjct: 477 CRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYV 536
Query: 106 VLSNVH 111
+LSN++
Sbjct: 537 ILSNIY 542
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G + + VTF++VL AC+ A LV G E+FH+++ ++ + P+ EHY C+VD+L
Sbjct: 494 LFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDIL 553
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A EF L AC IH L+ +RL EL P + YV
Sbjct: 554 GRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYV 613
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 614 LLSNIYS 620
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R +EVTFV +L+AC+RA L++ GL F+S+ E+ + P+ EHY C+ DLLGRA
Sbjct: 548 EMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRA 607
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA E L AC+++ +L+ ++L EL+P YV+LS
Sbjct: 608 GKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLS 667
Query: 109 NV 110
N+
Sbjct: 668 NI 669
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 19/126 (15%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++EK GL+ ++ TF +L AC+ A LVE GLE F+ +L + P +EHY CVVD+
Sbjct: 596 ELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDM 655
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG + +A + +W S+C+IHG + L +V +LLEL+PE Y
Sbjct: 656 LGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENY 715
Query: 105 VVLSNV 110
V++SN+
Sbjct: 716 VLISNL 721
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFE----VVPIMEHYGCV 56
M +M + GL+ NE+TFV VL AC+ A + G++ LGE E VVP ++HY CV
Sbjct: 358 MFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKF----LGEMELKHGVVPTIQHYTCV 413
Query: 57 VDLLGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHC 101
+D+LGRAG L EA N +W +AC+++G V L+ +++ EL P HC
Sbjct: 414 IDMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHC 473
Query: 102 RRYVVLSNVH 111
YV++SN +
Sbjct: 474 GNYVLMSNAY 483
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ +EVTFV +L+AC+ LV G LF S+ G + + P EHY C+VD+LGRAG
Sbjct: 468 MLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAG 527
Query: 65 LLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
L+ EA + L AC++HG V +++ +G++LLEL+P YV+L+
Sbjct: 528 LVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLA 587
Query: 109 NVH 111
N +
Sbjct: 588 NTY 590
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M +G +EVTF+ +L+AC+ A L G++LF ++ F + P+ EHY C+VDLLGR
Sbjct: 546 EQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGR 605
Query: 63 AGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L E AN LW +AC++H ++L RLLEL+P + Y+ L
Sbjct: 606 MGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITL 665
Query: 108 SNVH 111
SN+H
Sbjct: 666 SNMH 669
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G ++T AVL+AC+ LV+ GLE++ ++ ++ + P +EHYGC+VD+LGRA
Sbjct: 342 QMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRA 401
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA F L ACKI+ +++ VG L+E++PEH YV+LS
Sbjct: 402 GKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLS 461
Query: 109 NVH 111
N++
Sbjct: 462 NIY 464
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM G+ NE+TF+ VL AC LV+ G F S++ + + P ++HYGC+VDLL
Sbjct: 524 MFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 583
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA + + S ACK HG ++ VG++L+ELQP+H +V
Sbjct: 584 GRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHV 643
Query: 106 VLSNV 110
+LSN+
Sbjct: 644 LLSNI 648
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM G+R +EV V+VL+ACA +V+ G ++ H L+ + + ++ +
Sbjct: 291 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMY 349
Query: 61 GRAGLLSEANEFL----------WSACKIHGAVKL-SHEVGKRLLELQPE 99
+G + +A + W++ I G +K S E + L ++ PE
Sbjct: 350 SGSGEIMDAQKLFNGSHNLDQISWNS-MISGCMKCGSVEKARALFDVMPE 398
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G+R NEVTF+ VL +C++A LV G E FHS+ ++ P EH+GC+VD+LGRA
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L W S+CK+H ++ + LLEL PE ++V LS
Sbjct: 709 GKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALS 768
Query: 109 NVH 111
++
Sbjct: 769 QIY 771
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G++ N++TF+ L AC+ A LV G LF ++ +F +VP +EHYGC+VDLL
Sbjct: 421 LFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLL 480
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N +W +ACKIH + + LL L+P++C V
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKV 540
Query: 106 VLSNVH 111
++SN++
Sbjct: 541 LMSNIY 546
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G+R NEVTF+ VL +C++A LV G E FHS+ ++ P EH+GC+VD+LGRA
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L W S+CK+H ++ + LLEL PE ++V LS
Sbjct: 709 GKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALS 768
Query: 109 NVH 111
++
Sbjct: 769 QIY 771
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G R N VTF+ VL ACA A+LVE GL+ F S+ + + P M+HYGCVVDLLGRAG
Sbjct: 877 MLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAG 936
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A F+ W +C HG V ++ V K+L EL+P + Y +LSN
Sbjct: 937 QLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSN 996
Query: 110 VHT 112
+
Sbjct: 997 AYA 999
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N +TF++VL AC+ LVE G+ F S++ E+ + P ++H+GC++D+LGRA
Sbjct: 313 DMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRA 372
Query: 64 GLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W C +G V++ K++L L+ E +VVLS
Sbjct: 373 GRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLS 432
Query: 109 NVHT 112
N+ T
Sbjct: 433 NMLT 436
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +GL+ + VTF+AVL+AC+RA LVE G + F S+L + ++P +HY C++DL
Sbjct: 459 LFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLF 518
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F L S+C+++G ++ + LLEL P++ Y+
Sbjct: 519 GRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYI 578
Query: 106 VLSNVH 111
+LS+++
Sbjct: 579 LLSSIY 584
>gi|356547105|ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 477
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 21/129 (16%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ NE TF + L+AC LVE GL LFH + F ++P ++HYGC+VDLLGRA
Sbjct: 309 KMGAYGVKPNEATFTSFLSACCHGGLVEEGLILFHEMKRTFGMMPQIKHYGCIVDLLGRA 368
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLEL------QPEHCR 102
G L EA +F L ACKIHG V + +VGK LL+L +
Sbjct: 369 GNLEEAYDFIMRMPINPDAVIWRSLLGACKIHGDVVMGEKVGKFLLQLEEWSSAESPKSE 428
Query: 103 RYVVLSNVH 111
Y+ LSNV+
Sbjct: 429 DYIALSNVY 437
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E GL+ + F+ VL AC+ LVE G +F S+ EF + P++EHYGC+VDLLGRA
Sbjct: 273 EMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRA 332
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA +F L AC H + L+ + +R++EL P H YV+LS
Sbjct: 333 GLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLS 392
Query: 109 NVH 111
N +
Sbjct: 393 NAY 395
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ +++TFV+VL+AC+R+ +E G LF S+L + + P MEHY C+VDLLGR G
Sbjct: 837 MVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTG 896
Query: 65 LLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+ HG KL VGK L E + R YV+LSN
Sbjct: 897 HLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSN 956
Query: 110 VH 111
++
Sbjct: 957 IY 958
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M + + NE+TF+ VL AC LV+ G F+S++ + ++ P ++HYGC+VDLL
Sbjct: 596 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 655
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L W ACK HG ++ VG++L+ELQP+H +V
Sbjct: 656 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHV 715
Query: 106 VLSNVH 111
+LSN++
Sbjct: 716 LLSNIY 721
>gi|302805005|ref|XP_002984254.1| hypothetical protein SELMODRAFT_120057 [Selaginella moellendorffii]
gi|300148103|gb|EFJ14764.1| hypothetical protein SELMODRAFT_120057 [Selaginella moellendorffii]
Length = 341
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G++ +EVTF+ VL+AC+ A +VE F ++ E + +EHYGC++DLL
Sbjct: 203 IFERMQQEGVKPDEVTFINVLSACSHAGIVEDACYFFIAMTQELGLAAGIEHYGCLIDLL 262
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L+EA + LWS + ++HG VK++ +RL+EL+PE+ YV
Sbjct: 263 GRSGWLNEAEALVKKMTVQPDSVLWSSLLGSSRVHGNVKVAKHAAQRLIELEPENAASYV 322
Query: 106 VLSNVHT 112
LSN +T
Sbjct: 323 QLSNTYT 329
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
+ + G + + +TFV VL+ACA A LV+ GL+ FHS+ ++ + +HY C++DLL R+G
Sbjct: 396 LVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSG 455
Query: 65 LLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
EA ++FLW++ C+IHG +KL+ + L E++PE+ YV L+N
Sbjct: 456 QFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLAN 515
Query: 110 VH 111
++
Sbjct: 516 IY 517
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM G+ NE+TF+ VL AC LV+ G F S++ + + P ++HYGC+VDLL
Sbjct: 356 MFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 415
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA + + S ACK HG ++ VG++L+ELQP+H +V
Sbjct: 416 GRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHV 475
Query: 106 VLSNV 110
+LSN+
Sbjct: 476 LLSNI 480
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
+ ++G + VTFV VL AC+ L ELG E+FHS+ ++ + P +EHYGC+VDLLGR G
Sbjct: 341 LIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLG 400
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L SACKIHG ++L+ V K L+ + Y++LSN
Sbjct: 401 RLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSN 460
Query: 110 VHT 112
++
Sbjct: 461 AYS 463
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 80/129 (62%), Gaps = 19/129 (14%)
Query: 2 VDEMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVV 57
V +++EK GLR + VTF+ VL+AC+ A LV+LG F+++ ++++ P EHYGC++
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMI 563
Query: 58 DLLGRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCR 102
DLL RAG LS+A ++ +WS AC++HG V+ +R+L+L+P
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAG 623
Query: 103 RYVVLSNVH 111
++ L+N++
Sbjct: 624 THITLANIY 632
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 15/114 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA--- 69
N VTFV++L AC+ A L+E GL F+S+ E V P ++HY C+VDLLGRAG L EA
Sbjct: 301 NRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRL 360
Query: 70 --------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+E LWS AC+IH ++L+ + LLELQP++ YV+LSN++
Sbjct: 361 IEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIY 414
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L+E G F+ + +F + P +EHY C+VDLL R
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A EF +W A C+I+ ++L+ +V +R+ EL+PE+ YV+L
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 108 SNVH 111
+N++
Sbjct: 642 ANIY 645
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M GL+ ++VTF+ VL+AC+RA LVE G ++F S++ E +VPI +HY C++DL
Sbjct: 464 LFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLF 523
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG + EA F L S+C+ +G + + + L+EL P + YV
Sbjct: 524 SRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYV 583
Query: 106 VLSNVH 111
+LS+V+
Sbjct: 584 LLSSVY 589
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D + G R + VTFV VL+ACA A LV+ GL +FHS+ ++ + +HY CV+DLL R
Sbjct: 353 DMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSR 412
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+GL A N+FLW++ C+IH V+L+ + L E++PE+ YV L
Sbjct: 413 SGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTL 472
Query: 108 SNVH 111
+N++
Sbjct: 473 ANIY 476
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ +++TFV+VL+AC+R+ +E G LF S+L + + P MEHY C+VDLLGR G
Sbjct: 837 MVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTG 896
Query: 65 LLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+ HG KL VGK L E + R YV+LSN
Sbjct: 897 HLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSN 956
Query: 110 VH 111
++
Sbjct: 957 IY 958
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M + + +EVTF+ +L+AC+ A L GL++F ++ +F + P+ EHY C+VDLLGR
Sbjct: 546 EQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGR 605
Query: 63 AGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L E AN LW AC++H ++L +RL EL+P + Y+ L
Sbjct: 606 VGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITL 665
Query: 108 SNVH 111
SN+H
Sbjct: 666 SNMH 669
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE-FEVVPIMEHYGCVVDLLGRA 63
M G+R NEVTF+A+LTAC + LV G F+ ++ + F P +EHYGC++DLL RA
Sbjct: 396 MIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRA 455
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA +F +W SACK +G V+LS E+ LLEL+ + YV+LS
Sbjct: 456 GLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLS 515
Query: 109 NVHT 112
N++
Sbjct: 516 NIYA 519
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G++ NEVT+VA+L+AC+ LV G F+S+ + ++ P MEHY C+VDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL++A EF+ W AC++H +L +++LEL P Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 108 SNVH 111
SN++
Sbjct: 684 SNIY 687
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 VDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+D M G+R + VTF ++L +C RAR LG +L H+ L EF++ P Y ++ L
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG-KLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 61 GRAGLLSEANE 71
++G ++A +
Sbjct: 108 SKSGDSAKAED 118
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM + +RA+ VTF+AVL+AC+ A LV+ G F+ ++ ++++ P +EHY C++DLL
Sbjct: 497 LFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLL 556
Query: 61 GRAGLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L EA E L+SAC +H L ++GK L+E+ P+ Y
Sbjct: 557 GRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTY 616
Query: 105 VVLSNVH 111
++LSN++
Sbjct: 617 ILLSNMY 623
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M E G N VTF V+++C R +E G E+ H L E ++ +VD+ G+
Sbjct: 196 DKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEV-HRELIERRILLDAFVLSALVDMYGK 254
Query: 63 AGLLSEANE 71
G L A E
Sbjct: 255 CGCLEMAKE 263
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +GL +E+TFV VL AC+ +V G E F + ++++VP +EHYGC+VDLLGRA
Sbjct: 199 DMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRA 258
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W AC IHG + L RLL+L+P+ YV+LS
Sbjct: 259 GLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLS 318
Query: 109 NVHT 112
N++
Sbjct: 319 NLYA 322
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +EM ++ +E+TF+ +L AC+ LV+ G F+S+ + ++P ++HYGC+VDLL
Sbjct: 316 MFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLL 375
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA +F LW S+C HG ++L+ +V ++LEL H YV
Sbjct: 376 GRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYV 435
Query: 106 VLSNV 110
+LSN+
Sbjct: 436 ILSNL 440
>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 561
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M E+ +R + +TF A+L+AC + LV+ G + F S+ ++ +VP +EHY C+VDLL
Sbjct: 277 LYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLL 336
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G++G L EA+ F +W A CKIH +KL+ ++L +++P + YV
Sbjct: 337 GKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYV 396
Query: 106 VLSNVHT 112
++ N+++
Sbjct: 397 LMMNLYS 403
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ ++V F+ +L+AC+ + LV+ G F S+ +F +VP +EHYGC+VD+L R
Sbjct: 205 EEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCR 264
Query: 63 AGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGL+ EA N +W +AC+ HG +KL ++ ++L+ +P H YV+L
Sbjct: 265 AGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLL 324
Query: 108 SNVH 111
SN++
Sbjct: 325 SNIY 328
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G+R + FV VL+AC+ + L + GLELF ++ E+++ P EHY C+VDLL
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ S ACKIH V ++ +++E +P + YV
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYV 464
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 465 LMSNIYS 471
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G++ + VTF+++L+AC+ + LV+ G FH L+ E+ + P ++HYGC+VDLLGRA
Sbjct: 568 EMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFH-LMQEYGIKPSLKHYGCMVDLLGRA 626
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A +F L AC+IHG ++L RL E+ E+ YV+LS
Sbjct: 627 GFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLS 686
Query: 109 NVH 111
N++
Sbjct: 687 NIY 689
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M G++ NEVTFV ++ AC+ A LV+ G +LF S+ GE+ + P ++HY C +DLL
Sbjct: 326 LYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLL 385
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L+EA E + W SACK + ++S V LLEL+P++ YV
Sbjct: 386 SRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYV 445
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 446 LLSNVY 451
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +G++ N V F+AVLTAC+ A LV+ + F+S+ ++ ++P +EHY V DLL
Sbjct: 425 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL 484
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA EF+ WS AC++H ++L+ +V K+L + P++ YV
Sbjct: 485 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV 544
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 545 LLSNIYS 551
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 80/129 (62%), Gaps = 19/129 (14%)
Query: 2 VDEMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVV 57
V +++EK GLR + VTF+ VL+AC+ A LV+LG F+++ ++++ P EHYGC++
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMI 563
Query: 58 DLLGRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCR 102
DLL RAG LS+A ++ +WS AC++HG V+ +R+L+L+P
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAG 623
Query: 103 RYVVLSNVH 111
++ L+N++
Sbjct: 624 THITLANIY 632
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++ ++ + VT VAVL+AC+ + LV G++LF + + ++P +EH+ C+VDL
Sbjct: 520 LFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLF 579
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A E +W+ AC+IHG ++ ++LLE++PE+ YV
Sbjct: 580 GRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYV 639
Query: 106 VLSNVH 111
+++N++
Sbjct: 640 LIANMY 645
>gi|302781300|ref|XP_002972424.1| hypothetical protein SELMODRAFT_172645 [Selaginella moellendorffii]
gi|300159891|gb|EFJ26510.1| hypothetical protein SELMODRAFT_172645 [Selaginella moellendorffii]
Length = 288
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G++ +EVTF+ VL+AC+ A +VE F ++ E + +EHYGC++DLL
Sbjct: 150 IFERMQQEGVKPDEVTFINVLSACSHAGIVEDACYFFIAMTQELGLAAGIEHYGCLIDLL 209
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L+EA + LWS + ++HG VK++ +RL+EL+PE+ YV
Sbjct: 210 GRSGWLNEAEALVKKMTVQPDSVLWSSLLGSSRVHGNVKVAKHAAQRLIELEPENAASYV 269
Query: 106 VLSNVHT 112
LSN +T
Sbjct: 270 QLSNTYT 276
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GL N +TFVAVL+ACA A LV G LF S+ E+ +VP +EH C+VD+LGRA
Sbjct: 303 EMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRA 362
Query: 64 GLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
GLL EA F + ACK+H L +V + LL +PE+ YV+L
Sbjct: 363 GLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVIL 422
Query: 108 SNVH 111
SN++
Sbjct: 423 SNIY 426
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E + N VTF+ VL AC A LVE G +LF S++ E + P EHYGC+VDL RA
Sbjct: 446 MKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRAN 505
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A N +W SAC++HG +L KRLLEL+P+H VVLSN
Sbjct: 506 FLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSN 565
Query: 110 VH 111
++
Sbjct: 566 IY 567
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +G++ N V F+AVLTAC+ A LV+ + F+S+ ++ ++P +EHY V DLL
Sbjct: 385 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL 444
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA EF+ WS AC++H ++L+ +V K+L + P++ YV
Sbjct: 445 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV 504
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 505 LLSNIYS 511
>gi|242032157|ref|XP_002463473.1| hypothetical protein SORBIDRAFT_01g000443 [Sorghum bicolor]
gi|241917327|gb|EER90471.1| hypothetical protein SORBIDRAFT_01g000443 [Sorghum bicolor]
Length = 438
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 15/115 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R N++TF+ +L+AC+ + LV G LF S++ +F + P+ HYG +VDL+GR+
Sbjct: 324 KMQMAGVRPNDITFIGLLSACSHSGLVNEGRRLFDSMIEDFGIQPVQHHYGLMVDLIGRS 383
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRR 103
G + EA F LW SACK+HG V+L EV K+L+EL+P H R
Sbjct: 384 GRVKEALFFVKSMPVEPHPGLWGALASACKMHGEVELGEEVAKKLIELEPRHGSR 438
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++GL+ + +TFVAVL AC A LV+LG++ F+++ +F + EHY C+VDLL
Sbjct: 351 LFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA + + S AC+IH + L+ K LLEL P YV
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYV 470
Query: 106 VLSNVH 111
L+NV+
Sbjct: 471 QLANVY 476
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M + + NE+TF+ VL AC LV+ G F+S++ + ++ P ++HYGC+VDLL
Sbjct: 461 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 520
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L W ACK HG ++ VG++L+ELQP+H +V
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHV 580
Query: 106 VLSNVH 111
+LSN++
Sbjct: 581 LLSNIY 586
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++G++ + V FVA+LTA + LVE G +F S+ + + P HYGC+VDLL
Sbjct: 561 LFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLL 620
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLLSEA N+ +W +AC++H V ++ +R+ EL PE +V
Sbjct: 621 GRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHV 680
Query: 106 VLSNVH 111
+LSN++
Sbjct: 681 LLSNIY 686
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R N VT V V++ACA+ + ++LG E + +GE E+ +VD+ +
Sbjct: 230 EMVEVGIRPNSVTMVGVISACAKLQDLQLG-EQVCTCIGELELEVNALMVNALVDMYMKC 288
Query: 64 GLLSEANEFL 73
G + +A +
Sbjct: 289 GAIDKARKIF 298
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + + +EVTF+ VL AC LV G F S+ +F + P +EHYGC+VDLLGRAG
Sbjct: 282 MLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAG 341
Query: 65 LLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA E + S AC++HG KL + KRL+EL+P + YV+LSN
Sbjct: 342 LLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSN 401
Query: 110 VHT 112
+++
Sbjct: 402 IYS 404
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + + +EVTF+ VL AC LV G F S+ +F + P +EHYGC+VDLLGRAG
Sbjct: 282 MLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAG 341
Query: 65 LLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA E + S AC++HG KL + KRL+EL+P + YV+LSN
Sbjct: 342 LLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSN 401
Query: 110 VHT 112
+++
Sbjct: 402 IYS 404
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ N +TFV++L AC+ A LVE GL L + F V P ++H+ C+VDLLGRAG
Sbjct: 1374 MLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAG 1433
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA +E LWS AC+IH + L+ + K LLELQP++ Y++LSN
Sbjct: 1434 QLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSN 1493
Query: 110 VH 111
++
Sbjct: 1494 IY 1495
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M +R N VT V VL+AC+ LV+ G+E F S+ E+ + P EHY CVVD+L R
Sbjct: 765 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTR 824
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLLS A +F L SAC +H +++ LLEL+PE YV+L
Sbjct: 825 AGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 884
Query: 108 SNVH 111
SN++
Sbjct: 885 SNLY 888
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G+ VTF+++L AC+ + LV G E+FHS+ + P+ EHY C+VD+LGRA
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+ A EF L AC IH ++++ KRL +L PE+ YV+LS
Sbjct: 566 GQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
Query: 109 NVHT 112
N+++
Sbjct: 626 NIYS 629
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G+ VTF+++L AC+ + LV G E+FHS+ + P+ EHY C+VD+LGRA
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+ A EF L AC IH ++++ KRL +L PE+ YV+LS
Sbjct: 566 GQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
Query: 109 NVHT 112
N+++
Sbjct: 626 NIYS 629
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G R + VT + VL+AC+ A LVE G F S+ E +VP+ +HY C+VDLLGRA
Sbjct: 482 EMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRA 541
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN + W +ACK+HG + L V +RLLE+ P + YV+LS
Sbjct: 542 GCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLS 601
Query: 109 NVHT 112
N++
Sbjct: 602 NMYA 605
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + +R ++VTFV +L AC +V G +LF S+ +F+V P +EHYGC+VDLL
Sbjct: 304 LYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLL 363
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + +W AC HG V+L + L +L+P + YV
Sbjct: 364 GRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYV 423
Query: 106 VLSNVH 111
+LSN++
Sbjct: 424 ILSNIY 429
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM +R ++VTF+ VLTAC+ A V G E+F ++ +++VP ++H C++DLL
Sbjct: 843 IFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLL 902
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA EF +W+ AC+IHG ++L+EL+PE+ YV
Sbjct: 903 GRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYV 962
Query: 106 VLSNVH 111
+LSN++
Sbjct: 963 LLSNIY 968
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 76/122 (62%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+R+ +++LG +F ++ ++++ P +EHYGC++DLLG +G
Sbjct: 461 MRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSG 520
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACKI G V+L + L++++PE+ YV+LSN
Sbjct: 521 LFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSN 580
Query: 110 VH 111
++
Sbjct: 581 IY 582
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + +R +E T V V++ACA++ +ELG ++ HS + + ++ ++DL
Sbjct: 253 LFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQV-HSWIDDHGFGSNLKIVNSLMDLY 311
Query: 61 GRAGLLSEA 69
+ G L A
Sbjct: 312 SKCGELETA 320
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M + L N VTFV++L+AC+ + V+ G + F S+ ++ +VP EHY C+VDLLGR
Sbjct: 402 DNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGR 461
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG + EA F+ W SAC+IH V L+ E+ ++LL ++P+ YV+L
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLL 521
Query: 108 SNVH 111
SN++
Sbjct: 522 SNIY 525
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G++ N++TFV VL+ C+ A LV+ G F S+ + + P EHY C+VDL
Sbjct: 86 LFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLF 145
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ W AC++HG ++L+ ++L+EL PE+ YV
Sbjct: 146 GRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYV 205
Query: 106 VLSNVH 111
+LSN++
Sbjct: 206 LLSNIY 211
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E ++ N+VTF+ VL+AC+ A LV+ G LF+S+ +F++ P +EHYGC+VD+LGRAG
Sbjct: 415 MLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAG 474
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA +F L ++C+ H ++++ + + + L+P H Y++LSN
Sbjct: 475 FLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSN 534
Query: 110 VH 111
+
Sbjct: 535 TY 536
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 15/120 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
+G++ N V F+AVLTAC+ A LV+ + F+S+ ++ ++P +EHY V DLLGR G L
Sbjct: 367 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 426
Query: 68 EANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
EA EF+ WS AC++H ++L+ +V K+L + P++ YV+LSN+++
Sbjct: 427 EAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYS 486
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M E G+ +VTF+ VL AC+ + LVE G F S+ ++ + P +EHYGC+VDLL
Sbjct: 410 LFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLL 469
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ EA +F +W S+C +H V + E K+++ L P H YV
Sbjct: 470 GRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYV 529
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 530 LLSNIYA 536
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM ++G+R + VTF+ VL AC+ + +V GL+ F S+ E+ +VP ++HYGCV DLL
Sbjct: 313 LFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVPGIKHYGCVTDLL 371
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L +A +F LW SAC HGAV L V +R+LEL H YV
Sbjct: 372 ARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYV 431
Query: 106 VLSNV 110
+ SN+
Sbjct: 432 IFSNL 436
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KGL+ VT +VL+ACA +ELG H + + + +++ ++D+ G+
Sbjct: 215 EMQAKGLKPTSVTVTSVLSACALLGALELG-RWIHEYVRKAGLDSLVKVNTALIDMYGKC 273
Query: 64 GLLSEA 69
G L +A
Sbjct: 274 GSLEDA 279
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 16/122 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N+VTF+ +LTAC + LV+ G ELFH + +FE+VP EHY CVVDLLGRAG
Sbjct: 448 MKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAG 506
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L SACKI+ V L +L L P + YV LSN
Sbjct: 507 YLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSN 566
Query: 110 VH 111
++
Sbjct: 567 LY 568
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM +R + +TF+++LTAC R +V++G LF S++ ++++ P EHY C+VD+LGR
Sbjct: 554 EEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGR 613
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA L AC++HG V + V L+E++P YV++
Sbjct: 614 AGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLM 673
Query: 108 SNVH 111
SN++
Sbjct: 674 SNLY 677
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G++ + +TF+AV+TAC R +V+ G +LF+S++ + + P EHY +VD+L
Sbjct: 541 LFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDML 600
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF L AC+IHG V ++ V L+E++P YV
Sbjct: 601 GRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYV 660
Query: 106 VLSNVH 111
++SN++
Sbjct: 661 LMSNLY 666
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M ++G++ NEVT+VA+L+AC+ LV G F+S+ + ++ P MEHY C+VDLL R
Sbjct: 564 NQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL++A EF+ W AC++H +L +++LE P Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQL 683
Query: 108 SNVH 111
SN++
Sbjct: 684 SNIY 687
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 2 VDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+D M G+R + VTF ++L +C RAR LG +L H+ L EFE+ P Y ++ L
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARHFRLG-KLVHARLIEFEIEPDSVLYNSLISLY 107
Query: 61 GRAGLLSEANE 71
++G L++A +
Sbjct: 108 SKSGDLTKAKD 118
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M +G++ + +TF+AV+TAC R +V+ G +LF+S++ + + P EHY +VD+L
Sbjct: 564 LFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDML 623
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF L AC+IHG V ++ V L+E++P YV
Sbjct: 624 GRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYV 683
Query: 106 VLSNVH 111
++SN++
Sbjct: 684 LMSNLY 689
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ ++VT V VLTACA A +V G F+ + + +VP MEHYGC+VDL GRAG
Sbjct: 329 MEREGVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAG 388
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L+ A KIHG V L +G R++EL P++ RYV+L+N
Sbjct: 389 QLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLAN 448
Query: 110 V 110
+
Sbjct: 449 L 449
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +G+ N V F+AVLTAC+ A LV+ + F+S+ +F + P +EHY V DLL
Sbjct: 489 LFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLL 548
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F+ W SAC++H V ++ +V R+LE+ P++ Y+
Sbjct: 549 GRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYI 608
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 609 LLANIYS 615
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ +E +F A+L AC+ + L+ G + F+S+ E V P +EHY CVVDLL R
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A +F L S C+IH VKL+ +V + + EL+P++ R YVVL
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 706
Query: 108 SNVH 111
+NV+
Sbjct: 707 ANVY 710
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+R ++VTF+A+L+ C+ A L E G +LFH + +F V P +EHY C+VD+L
Sbjct: 219 LFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDML 278
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + A + +W ++C++H V L+ + RL EL+P + YV
Sbjct: 279 GRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYV 338
Query: 106 VLSNVH 111
+LSN++
Sbjct: 339 MLSNIY 344
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G +A+E TFV+VL AC+ A LV+ F ++ E ++ P+ HYGC+VDLLGRA
Sbjct: 204 KMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGHYGCIVDLLGRA 263
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A E LW+ ACK HG +KL+ +R+ EL P YV+LS
Sbjct: 264 GRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDMKLAERAAERIRELDPGSATPYVLLS 323
Query: 109 NVHT 112
NV++
Sbjct: 324 NVYS 327
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ N VTFV VL+AC+ LV+ GL+ F S+ ++VP EHY CVVDLL
Sbjct: 753 LFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLL 812
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A E+ L SAC IH +++ LLEL+PE YV
Sbjct: 813 GRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYV 872
Query: 106 VLSNVH 111
++SN++
Sbjct: 873 LISNIY 878
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G++ N +TFV+VL AC+ A L++ G F+ + EF+V P +EHY C+VDLLGRA
Sbjct: 391 EMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRA 450
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W AC+IH V+L ++L +L P +C YV+LS
Sbjct: 451 GYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLS 510
Query: 109 NVHT 112
N++
Sbjct: 511 NIYA 514
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G++ N +TF+AVL ACA LVE GLE F+ + ++ + P ++HY C+VDLLGR G
Sbjct: 450 MLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKG 509
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L SACK+HG +++ V ++L EL+P+ YV ++N
Sbjct: 510 HLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMAN 569
Query: 110 VH 111
++
Sbjct: 570 IY 571
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G +E+TF+ +L AC+ LVE G E F+ + ++ V+P ++HYGC+VDLL
Sbjct: 310 LFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLL 369
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF LW SAC HG V+L V +++ EL H Y+
Sbjct: 370 GRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYI 429
Query: 106 VLSNV 110
+LSN+
Sbjct: 430 ILSNL 434
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ N VTFV VL+AC+ LV+ GL+ F S+ ++VP EHY CVVDLL
Sbjct: 753 LFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLL 812
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A E+ L SAC IH +++ LLEL+PE YV
Sbjct: 813 GRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYV 872
Query: 106 VLSNVH 111
++SN++
Sbjct: 873 LISNIY 878
>gi|356542056|ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 595
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 21/129 (16%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ NE TF + L+AC LVE GL+LF + F V+P ++HYGC+VDLLGRA
Sbjct: 429 KMGAYGVKPNEATFTSFLSACCHGGLVEEGLQLFLEMKRTFGVMPQIQHYGCIVDLLGRA 488
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLEL------QPEHCR 102
G L EA +F L +AC IHG V + +VGK LL+L +
Sbjct: 489 GKLEEAYDFIMQMPINPDAVIWRSLLAACNIHGDVVMGEKVGKFLLQLEEWSSAESPKSE 548
Query: 103 RYVVLSNVH 111
Y+ LSNV+
Sbjct: 549 DYIALSNVY 557
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +GL +E+TFV VL AC+ +++ G + F + EF ++P +EHYGC+VDLL RA
Sbjct: 314 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRA 373
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ +A E++ W AC IHG + L LL+L+P+H YV+LS
Sbjct: 374 GLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLS 433
Query: 109 NVHT 112
N++T
Sbjct: 434 NLYT 437
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M G+ NEVTFV +L AC+ + LV+ G + F S+ ++ + P++EHY C+VDLL
Sbjct: 637 MYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLL 696
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + A F +WS ACKIH V++ ++L ++P + YV
Sbjct: 697 GRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYV 756
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 757 MLSNIYS 763
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 75/121 (61%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
EK ++ + VT +AVL+ C+ ++ + GL ++ ++ GE+ + P EHYGC+VD+LGRAG
Sbjct: 348 EKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGR 407
Query: 66 LSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA EF L AC++H +V + VG RL+E++PE+ YV+LSN+
Sbjct: 408 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNL 467
Query: 111 H 111
+
Sbjct: 468 Y 468
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + NE TF VLT+C RA + LG ++ H L+ ++ + ++D+ +A
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKA 200
Query: 64 GLLSEANEFL 73
G + EA E
Sbjct: 201 GQIEEAREIF 210
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + G+ N VTF+ +L AC+ L+ G F S+ ++ ++P +EHYGC+VDLL
Sbjct: 348 LFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLL 407
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W AC++H V+++ E K LLEL P + YV
Sbjct: 408 SRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYV 467
Query: 106 VLSNVHT 112
VLSN++
Sbjct: 468 VLSNIYA 474
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + G+ N VTF+ +L AC+ L+ G F S+ ++ ++P +EHYGC+VDLL
Sbjct: 348 LFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLL 407
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W AC++H V+++ E K LLEL P + YV
Sbjct: 408 SRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYV 467
Query: 106 VLSNVHT 112
VLSN++
Sbjct: 468 VLSNIYA 474
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + +GL VTFV VL AC+RA LV+ G F + + + P MEHYGC+VDLL
Sbjct: 149 LFERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLL 208
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ EA + LW+ AC+IHG +L ++G RL+EL P + YV
Sbjct: 209 GRAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHGLAELGEKIGNRLIELDPTYDGHYV 268
Query: 106 VLSNVHT 112
L++++
Sbjct: 269 QLASIYA 275
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G R NEV FVA+L+AC+ A +ELG F+ ++ +F + P +EHYGC+VDLL
Sbjct: 346 LFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLL 405
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L+EA E +W SAC+IH ++ ++L++L+P RY
Sbjct: 406 GRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRY 464
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ EM E+ + A + +TFV VLTACA + LVE G F ++ + P EHYGC+VDL
Sbjct: 322 LFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDL 381
Query: 60 LGRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAG L EA + L AC+IHG ++L EVG R++EL PE+ RY
Sbjct: 382 LARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRY 441
Query: 105 VVLSNVH 111
V+L N++
Sbjct: 442 VILGNMY 448
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + G+ N VTF+ +L AC+ L+ G F S+ ++ ++P +EHYGC+VDLL
Sbjct: 315 LFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLL 374
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA+EF+ W AC++H V+++ E K LLEL P + YV
Sbjct: 375 SRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYV 434
Query: 106 VLSNVH 111
VLSN++
Sbjct: 435 VLSNIY 440
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G++ NEVT VAVL ACA ++LG+ + H + ++D+ +
Sbjct: 217 KMEEAGVKCNEVTVVAVLAACADLGALDLGMRI-HEYSNRHGFKRNVRISNTLIDMYVKC 275
Query: 64 GLLSEA 69
G L EA
Sbjct: 276 GCLEEA 281
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ ++V F+ +L+AC+ + LVE G E F S++ ++++VP +EHYGC+VD+
Sbjct: 322 LFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMY 381
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GL+ EA EF L SAC+ HG KL ++ K L++ +P H YV
Sbjct: 382 CRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYV 441
Query: 106 VLSNVH 111
+LSN++
Sbjct: 442 LLSNIY 447
>gi|302761980|ref|XP_002964412.1| hypothetical protein SELMODRAFT_81698 [Selaginella moellendorffii]
gi|300168141|gb|EFJ34745.1| hypothetical protein SELMODRAFT_81698 [Selaginella moellendorffii]
Length = 504
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G + + VTF++VL+ C+ A LV+ G E+F S+ + + P MEHY CV D+LGRAG
Sbjct: 376 MLLDGSKPDRVTFISVLSMCSHAGLVKQGCEIFTSIRDDHRLEPAMEHYSCVTDMLGRAG 435
Query: 65 LLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F +W+ ACK++G V+ S + +++LELQP + Y+VL N
Sbjct: 436 WLEEAENFVKKMGLEPDDGIWACLLGACKMYGDVERSERIARKVLELQPHNSEAYIVLCN 495
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G++ N+VT++AVL+AC+ L++ + F S+ +VP MEHY C+VDLLGR+G
Sbjct: 559 MLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSG 618
Query: 65 LLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LLSEA EF+ S +C++H KL K +LE +P Y++LSN
Sbjct: 619 LLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSN 678
Query: 110 VH 111
++
Sbjct: 679 LY 680
>gi|449451962|ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+G R NE+TF+AVL A + +V G++ F ++ E+ + P +EHYGC++DLLGRAG
Sbjct: 419 MEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAG 478
Query: 65 LLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL EA++ L +AC+++G V+L V ++L++L EH ++LS
Sbjct: 479 LLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLS 538
Query: 109 NVH 111
+ +
Sbjct: 539 STY 541
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M E+G N+VT + VL AC A L++ G+ F ++ ++ +VP +EHYGC+VDLL
Sbjct: 403 LFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLL 462
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N +W AC++H AV+L+ EV L+EL+P +
Sbjct: 463 GRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFS 522
Query: 106 VLSNVH 111
+LSN++
Sbjct: 523 MLSNIY 528
>gi|449488709|ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 556
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+G R NE+TF+AVL A + +V G++ F ++ E+ + P +EHYGC++DLLGRAG
Sbjct: 384 MEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAG 443
Query: 65 LLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL EA++ L +AC+++G V+L V ++L++L EH ++LS
Sbjct: 444 LLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLS 503
Query: 109 NVH 111
+ +
Sbjct: 504 STY 506
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G++ NEVTF+ +L+AC+ A LV+ G+ELF ++ E+ +VP + HYGCV+DLL RA
Sbjct: 337 KMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRA 396
Query: 64 GLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W A C+IH + V + LLEL E+ YV ++
Sbjct: 397 GRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIA 456
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++ + NE+TF AV++AC RA LV+ G E+F + +F + P +HYGC+VDLL
Sbjct: 606 LFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLL 665
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF L ACK H V+L+ +L L+P + YV
Sbjct: 666 GRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYV 725
Query: 106 VLSNVH 111
LSN++
Sbjct: 726 TLSNIY 731
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G+R + FV VL+AC+ + L + GLELF ++ E+++ P EHY C+VDLL
Sbjct: 342 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 401
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ W ACKIH V ++ +++E +P + YV
Sbjct: 402 GRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYV 461
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 462 LMSNIYS 468
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++ + +TFV VL AC+ A LV G+ F+S+ ++ + P +EHYGC+VD+LGRA
Sbjct: 299 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 358
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G ++EA + L SAC+IHG + ++ ++L+EL P++ YV+LS
Sbjct: 359 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 418
Query: 109 NVHT 112
N+++
Sbjct: 419 NIYS 422
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + G+ +++TFV +L+AC+ + +++LG +F S+ ++++ P +EHYGC++DLL
Sbjct: 388 LFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLL 447
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G GL EA E L ACK+H V+L + L++++PE+ YV
Sbjct: 448 GHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYV 507
Query: 106 VLSNVH 111
+LSN++
Sbjct: 508 LLSNIY 513
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + ++VT+V +L+AC+ A LVE GL+ F L+ + ++ +HY C+VDL GRA
Sbjct: 409 EMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRA 468
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F+ W A C +H VK+ + K+LLE++PE+ Y++LS
Sbjct: 469 GRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLS 528
Query: 109 NVH 111
N++
Sbjct: 529 NIY 531
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + ++VT+V +L+AC+ A LVE GL+ F L+ + ++ +HY C+VDL GRA
Sbjct: 430 EMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRA 489
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F+ W A C +H VK+ + K+LLE++PE+ Y++LS
Sbjct: 490 GRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLS 549
Query: 109 NVH 111
N++
Sbjct: 550 NIY 552
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + VT + VL+AC+ A LVE G FHS+ E + P+ +H+ C+VDLLGRA
Sbjct: 482 KMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRA 541
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN+ + W +ACK+HG ++L V ++L+E+ P + YV+LS
Sbjct: 542 GCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLS 601
Query: 109 NVHT 112
N++
Sbjct: 602 NMYA 605
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G+ +EVTFV +L+AC+ L++ GL+LF ++ + + P+ EHY C+VDLLGRA
Sbjct: 307 KMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRA 366
Query: 64 GLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L E AN +W AC+IHG ++L+ ++LLE +P YV+LS
Sbjct: 367 GRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLS 426
Query: 109 NVHT 112
N+
Sbjct: 427 NMQA 430
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 15/117 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G+ + VT V+VL+AC+RA VE GL++F S+ G + + P EHY CVVDLLGR+GL+
Sbjct: 410 GIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDR 469
Query: 69 ANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A EF+ W ACK+HG KL ++L EL P+ +VV SN+
Sbjct: 470 AYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNM 526
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++G++ + VTFV++L AC+ A LV+ G F + +++VPI +HY C+ D+L
Sbjct: 461 LFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADML 520
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ W AC+IHG V++ + L EL PE+ YV
Sbjct: 521 GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYV 580
Query: 106 VLSNVHT 112
++SN++
Sbjct: 581 LMSNMYA 587
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + ++ +++TFV +L+AC+ A +++LG +F S+ +++ P +EHYGC++DLL
Sbjct: 386 IFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLL 445
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G +GL EA E +W ACK+HG V+L + + L +++P + YV
Sbjct: 446 GHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYV 505
Query: 106 VLSNVH 111
+LSN++
Sbjct: 506 LLSNIY 511
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++ + +TFV VL AC+ A LV G+ F+S+ ++ + P +EHYGC+VD+LGRA
Sbjct: 430 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 489
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G ++EA + L SAC+IHG + ++ ++L+EL P++ YV+LS
Sbjct: 490 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 549
Query: 109 NVHT 112
N+++
Sbjct: 550 NIYS 553
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G++ NEVT++AVL+AC+ L++ + F+S+ + P MEHY C+VDLLGR+
Sbjct: 539 EMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRS 598
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF+ S +C++H KL K++LE +P Y++LS
Sbjct: 599 GLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLS 658
Query: 109 NVH 111
N++
Sbjct: 659 NLY 661
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ + VTF+ +++AC A LV+ G+ FH + E+ + MEHY C+VDL GRA
Sbjct: 607 EMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRA 666
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA + + S AC++HG V+L+ + LLEL P++ YV+LS
Sbjct: 667 GRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 726
Query: 109 NVH 111
NVH
Sbjct: 727 NVH 729
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G+ +++TFV +L+AC+ + ++LG +F S+ ++++ P +EHYGC++DLL
Sbjct: 389 LFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLL 448
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G +GL EA E +W AC+ HG ++L+ + L++++PE+ YV
Sbjct: 449 GHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYV 508
Query: 106 VLSNVH 111
+LSN++
Sbjct: 509 LLSNIY 514
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + +R +E T V VL+ACA++R VELG ++ HS + + ++ ++DL
Sbjct: 185 LFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQV-HSWIDDHGFGSNLKIVNALIDLY 243
Query: 61 GRAGLLSEA 69
+ G + A
Sbjct: 244 SKCGQVETA 252
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + GL+ + VTFV++L+AC+ LV+ GL F S+ EF V +EH C++DLLGR+
Sbjct: 844 EMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRS 903
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA NEF+W +ACK+HG ++L + RL EL YV+ S
Sbjct: 904 GRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYS 963
Query: 109 NV 110
NV
Sbjct: 964 NV 965
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R +E+TFV VL AC+ A VE G + F + E+ + P + HYGC+VDLLGRA
Sbjct: 333 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 392
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EA +F+ W AC+IHG V+L +LL+++ + YV+LS
Sbjct: 393 GLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLS 452
Query: 109 NVH 111
N++
Sbjct: 453 NIY 455
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R +E+TFV VL AC+ A VE G + F + E+ + P + HYGC+VDLLGRA
Sbjct: 368 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 427
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EA +F+ W AC+IHG V+L +LL+++ + YV+LS
Sbjct: 428 GLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLS 487
Query: 109 NVH 111
N++
Sbjct: 488 NIY 490
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G N +TF++VL AC+ A L++ G ++++ F + P +EHYGC+VDLL
Sbjct: 385 IFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLL 444
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + +W SAC+IH V+L+ KRL EL +C YV
Sbjct: 445 GRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYV 504
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 505 LLSNIYA 511
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G R + VT++A+L+AC+ A LV+ GL+LF +L+ + + +H+ C+VDL
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLF 500
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F+ W+A C +HG + L ++LLE +PE+ Y+
Sbjct: 501 GRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYL 560
Query: 106 VLSNVH 111
VLSN++
Sbjct: 561 VLSNIY 566
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G R + VT++A+L+AC+ A LV+ GL+LF +L+ + + +H+ C+VDL
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLF 500
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F+ W+A C +HG + L ++LLE +PE+ Y+
Sbjct: 501 GRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYL 560
Query: 106 VLSNVH 111
VLSN++
Sbjct: 561 VLSNIY 566
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ +E +F +L AC+ + L+ G + F+S+ E V P +EHY CVVDLL R
Sbjct: 862 NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A +F L S C+IH VKL+ +V + + EL+P++ R YVVL
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 981
Query: 108 SNVH 111
+NV+
Sbjct: 982 ANVY 985
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ + V FVA++ AC+ + LVE GL FH + ++++ P +EHY CVVDLL R+
Sbjct: 667 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 726
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL +A +F L SAC++ G +++ V +R++EL P+ YV++S
Sbjct: 727 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVS 786
Query: 109 NVH 111
NV+
Sbjct: 787 NVY 789
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E + + +TF AVL AC+ A +VELG LF + ++ + P +EHY C+VDLL
Sbjct: 1163 LFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLL 1222
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA ++F+W AC+ HG ++L+ + L EL+PE +
Sbjct: 1223 GRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSL 1282
Query: 106 VLSNVH 111
+LSN++
Sbjct: 1283 LLSNLY 1288
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ +M E+G + TF+ VL+AC+ + LV+ G E F S++ ++ + P H C+VD+L
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F L +AC+ + ++++ V +++L+L+P YV
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYV 624
Query: 106 VLSNVH 111
LSN++
Sbjct: 625 TLSNMY 630
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 80/124 (64%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G R N+VTF+++L+AC+ A L++ G L++S++ ++ + P MEHY C+VDL+GR
Sbjct: 525 EQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGR 584
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L A +F L AC++H V+L+ + +R+L+L+ + YV+L
Sbjct: 585 AGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLL 644
Query: 108 SNVH 111
SN++
Sbjct: 645 SNLY 648
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L+E G F+ + +F + P +EHY C+VDLL R
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A +F +W A C+I+ ++L+ +V +R+ EL+PE+ YV+L
Sbjct: 582 TGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 108 SNVH 111
+N++
Sbjct: 642 ANIY 645
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + + N VTFV++L+AC+ + V+ G + F S+ ++ VVP EHY C+VDLLGRA
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA F+ W SAC+IH V L+ E+ ++LL ++PE YV+LS
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLS 522
Query: 109 NVH 111
N++
Sbjct: 523 NIY 525
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM EKG++ + +TFVAVL AC A +LG++ FHS+ ++ +V +HY C+VDLL
Sbjct: 285 LFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLL 344
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + L AC+IH +++ ++LL L P YV
Sbjct: 345 GRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYV 404
Query: 106 VLSNVH 111
L+NV+
Sbjct: 405 QLANVY 410
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M +R N VT V VL+AC+ LV+ G+ F S+ E+ + P EHY CVVD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLLS A EF L SAC +H +++ LLEL+PE YV+L
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 108 SNVH 111
SN++
Sbjct: 902 SNLY 905
>gi|357124385|ref|XP_003563881.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 670
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+G+ ++ TFV +L++C+R L+ G E F + + V P MEHY C+VDL
Sbjct: 497 LFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQMKALYNVEPKMEHYTCMVDLF 556
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG S+A EF+ W A C+ HG V+L K++LE++PE Y+
Sbjct: 557 ARAGRFSDALEFIDALPCQPDQLVWEALLASCRTHGNVELGRLAAKKILEIRPEDPSPYI 616
Query: 106 VLSNVH 111
LSN+H
Sbjct: 617 TLSNIH 622
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G R N++TFV VL AC+ A +V+ LE F + E+++ P+M+HYGC+VD+
Sbjct: 382 LFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMF 441
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L EA NEF+W + C+ HG +L ++LL+L+P YV
Sbjct: 442 VRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYV 501
Query: 106 VLSNVH 111
VL N++
Sbjct: 502 VLLNMY 507
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G + + +T + VL+AC A VE G F S+ +F V P+ +HY C+VDLLGRA
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W +ACK+H + L V ++LLE++P + YV+LS
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 602
Query: 109 NVH 111
N++
Sbjct: 603 NMY 605
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M G++ NEVTFV ++ AC+ A LV+ G +LF S+ E+ + P ++HY C +DLL
Sbjct: 232 LYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLL 291
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G LSEA E + W SACK H ++ V LLEL+P+ Y+
Sbjct: 292 SRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYI 351
Query: 106 VLSNVHT 112
+LSNV+
Sbjct: 352 LLSNVYA 358
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D G++ + VTFV VL+ACA A LV+ GLE+FHS+ ++ + +HY CV+DLL R
Sbjct: 359 DMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSR 418
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G A N+FLW++ C+IH V L+ + L E++PE+ YV L
Sbjct: 419 SGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTL 478
Query: 108 SNVH 111
+N++
Sbjct: 479 ANIY 482
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G++ + VTF+ +L+AC A V+ G++ F + E+ + MEHY C+VDL GRA
Sbjct: 467 KMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRA 526
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA ++ +W AC++HG V+L+ + LL+L PE+ YV+LS
Sbjct: 527 GRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLS 586
Query: 109 NVHT 112
NVH
Sbjct: 587 NVHA 590
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G++ NE+TF +VL AC+ LV+ GL LF ++ + P+ HY CVVDLL
Sbjct: 577 LFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLL 636
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W AC IH V+L +RL EL+PE Y+
Sbjct: 637 GRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYI 696
Query: 106 VLSNVH 111
+L+N++
Sbjct: 697 LLANIY 702
>gi|356554965|ref|XP_003545811.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 517
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + GLR N VTF+ VL+AC+ LVE G+ F ++ ++ +VP ++HYGCV+D+LGR
Sbjct: 363 ESMEKAGLRPNHVTFLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGR 422
Query: 63 AGLLSE------------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L E AN +W AC +H V++ V ++LE++ H YV+
Sbjct: 423 AGRLEEAEKIALQVPHEVANAVMWRTLLGACNVHNNVEIGQRVTNKILEMERGHGGDYVL 482
Query: 107 LSNV 110
+SN+
Sbjct: 483 MSNI 486
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G++ NE+TF +VL AC+ LV+ GL LF ++ + P+ HY CVVDLL
Sbjct: 549 LFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLL 608
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W AC IH V+L +RL EL+PE Y+
Sbjct: 609 GRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYI 668
Query: 106 VLSNVH 111
+L+N++
Sbjct: 669 LLANIY 674
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E + + +TF AVL AC+ A +VELG LF + ++ + P +EHY C+VDLL
Sbjct: 544 LFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLL 603
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA ++F+W AC+ HG ++L+ + L EL+PE +
Sbjct: 604 GRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSL 663
Query: 106 VLSNVH 111
+LSN++
Sbjct: 664 LLSNLY 669
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M +R N VT V VL+AC+ LV+ G+ F S+ E+ + P EHY CVVD+L R
Sbjct: 742 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 801
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLLS A EF L SAC +H +++ LLEL+PE YV+L
Sbjct: 802 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 861
Query: 108 SNVH 111
SN++
Sbjct: 862 SNLY 865
>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
Length = 1925
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV++L+ACA LVE G LF SL ++ + P MEHY C+VDLLGR G
Sbjct: 799 MIDSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLLGRTG 858
Query: 65 LLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+ HG K+ +GK L++ + R YV+LSN
Sbjct: 859 HLDEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIKSEYGKSRSYVMLSN 918
Query: 110 VH 111
++
Sbjct: 919 IY 920
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ + VTF+ +++AC A LV G+ FH + E+ + MEHY C+VDL
Sbjct: 637 LFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLY 696
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + + S AC++HG V+L+ + LLEL P++ YV
Sbjct: 697 GRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYV 756
Query: 106 VLSNVH 111
+LSNVH
Sbjct: 757 LLSNVH 762
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E G+ NEVT++AVL+AC+ L+ GL+ F S+ E +VP MEHY CVVDLLGR+
Sbjct: 442 KMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRS 501
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + S AC++HG + L + +LE P Y++LS
Sbjct: 502 GHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLS 561
Query: 109 NVH 111
N+H
Sbjct: 562 NLH 564
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G R + +TF+AVL ACA + LVE G + F +L +++ P +EHYGC+VDLL
Sbjct: 396 LFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLL 455
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA E L SAC IHG +++ +++L YV
Sbjct: 456 GRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYV 515
Query: 106 VLSNVH 111
+L+N++
Sbjct: 516 ILANLY 521
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++ NE+TFVAVL AC+ A V G F+ + F++ P ++HYGC+VD+L
Sbjct: 365 LFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDIL 424
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA +F L AC++HG V+L ++LL+++ + YV
Sbjct: 425 GRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYV 484
Query: 106 VLSNVH 111
+LSN++
Sbjct: 485 LLSNIY 490
>gi|302780141|ref|XP_002971845.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
gi|300160144|gb|EFJ26762.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
Length = 383
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G +A+E TFV+VL AC+ A LV+ F +++ E ++ P+ HYGC+VDLLGRA
Sbjct: 102 KMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMMSERKLEPLPGHYGCIVDLLGRA 161
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A E LW+ ACK HG + L+ +R+ EL P YV+LS
Sbjct: 162 GRLADAEELIQRMKAPHSGVLWTTLLGACKTHGDMMLAERAAERIRELDPGSATPYVLLS 221
Query: 109 NVHT 112
NV++
Sbjct: 222 NVYS 225
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 15/114 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEANEF 72
N+VTFVAVLTAC+ + V GL +F+S+ + + P +EHYGC+VDLLGR+G SE +
Sbjct: 461 NQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDV 520
Query: 73 -----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+W SAC+ +G ++++ GK LL+L+PE YV+LSN++
Sbjct: 521 IEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIY 574
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
DEM + + ++VTF+ VLTAC+ A V G ++F ++ + + P ++HY C+VDLLGR
Sbjct: 713 DEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGR 772
Query: 63 AGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA EF +W+ AC+IHG K K+L+EL+P+ YV+L
Sbjct: 773 WGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLL 832
Query: 108 SNVH 111
SN++
Sbjct: 833 SNMY 836
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV +L+AC+ + +++LG +F S+ +++++P +EHYGC++DL G +G
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSG 489
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L ACK+HG V+L + L++++PE+ YV+LSN
Sbjct: 490 LFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSN 549
Query: 110 VH 111
++
Sbjct: 550 IY 551
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + +R +E T V VL+ACA++ +ELG ++ HS + + ++ ++DL
Sbjct: 222 LFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV-HSWINDHGFGXNLKIVNALIDLY 280
Query: 61 GRAGLLSEA 69
+ G L A
Sbjct: 281 SKCGELETA 289
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L+E G F+ + +F + P +EHY C+VDLL R
Sbjct: 384 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 443
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A +F +W A C+I+ ++L+ +V +R+ EL+PE+ YV+L
Sbjct: 444 TGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 503
Query: 108 SNVH 111
+N++
Sbjct: 504 ANIY 507
>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
Length = 920
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 15/115 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E+ ++ +E+TF VLTAC+ A LV+ G +F+S+ + V+P EHYGC+VDLL
Sbjct: 641 MFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLL 700
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEH 100
GRAG L + +F L SAC+ HG +L+H + K LLE P++
Sbjct: 701 GRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQN 755
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M KG+ ++ TFV VL CA A V+ G E+F S+ +F++ P +EHYGCVVDLL
Sbjct: 329 LFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLL 388
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G + EA N LW SAC+ HG +++ K L+ L+P + YV
Sbjct: 389 GRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYV 448
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 449 LLSNVY 454
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
E ++ + +T++AVL+ C+ +L ++GLE+F++++ G+ + P + HYGCVVDLLGRAG
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446
Query: 66 LSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA +F+ W + C++H V++ VG++LLEL+PE+ YV+LSN+
Sbjct: 447 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNL 506
Query: 111 H 111
+
Sbjct: 507 Y 507
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ ++ N VTFV VL AC+ A LVE G F S+ E + P EHYGC+VDL GRA
Sbjct: 171 QMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRA 230
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL +A N +W +AC+IHG +L K++LEL+P+H V LS
Sbjct: 231 NLLRDALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLS 290
Query: 109 NVHT 112
N++
Sbjct: 291 NIYA 294
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++AN VT + VL AC+ +VE GL F + + VVP MEHY C++DLLGR G
Sbjct: 565 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVG 624
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A NE +W C++HG V+L +++L ++PE+ YV+LSN
Sbjct: 625 RLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSN 684
Query: 110 VH 111
+
Sbjct: 685 TY 686
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 75/121 (61%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
EK NEVTF+ VL AC+ +VE G F + ++ + P ++HYG +VD+LGRAGL+
Sbjct: 247 EKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLV 306
Query: 67 SEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA N +W +AC++HG ++L+ +V ++LLEL+P+H YV+L+N++
Sbjct: 307 EEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMY 366
Query: 112 T 112
Sbjct: 367 A 367
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + + + +TFV VL+ACA + LVE G F + + P MEH+GC+VDLL
Sbjct: 285 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 344
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA + L AC+IHG +L ++GK+++EL+P + RYV
Sbjct: 345 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 404
Query: 106 VLSNVHT 112
+L+N++
Sbjct: 405 LLANLYA 411
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NEVTF+ VLT+C+ LVE G F + +++ P +EHYGC+VDLLGRA LL
Sbjct: 392 EGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLL 451
Query: 67 SEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F+ W AC+ G V L+ V +R+LEL+P+ C +V+LSNV+
Sbjct: 452 TEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVY 511
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + + + +TFV VL+ACA + LVE G F + + P MEH+GC+VDLL
Sbjct: 340 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 399
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA + L AC+IHG +L ++GK+++EL+P + RYV
Sbjct: 400 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 459
Query: 106 VLSNVHT 112
+L+N++
Sbjct: 460 LLANLYA 466
>gi|296082095|emb|CBI21100.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G R + +TF+AVL ACA + LVE G + F +L +++ P +EHYGC+VDLL
Sbjct: 75 LFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLL 134
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA E + W SAC IHG +++ +++L YV
Sbjct: 135 GRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYV 194
Query: 106 VLSNVHT 112
+L+N++
Sbjct: 195 ILANLYA 201
>gi|125525878|gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
Length = 870
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 15/115 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M E+ ++ +E+TF VLTAC+ A LV+ G +F+S+ + V+P EHYGC+VDLL
Sbjct: 599 MFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLL 658
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEH 100
GRAG L + +F L SAC+ HG +L+H + K LLE P++
Sbjct: 659 GRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQN 713
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E+GL+ + V F+ LTAC LV+ G E+F+S+ V P HYGC+VDLL
Sbjct: 557 LFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLL 616
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++ G V+++ +++ L PE YV
Sbjct: 617 GRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYV 676
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 677 LLSNVY 682
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + + +++TF+ +LTACA + LVE G F ++ + + P MEH+GC+VDLL
Sbjct: 345 LFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLL 404
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG++ EA + L ACK H ++L E+G+R++EL+P + RYV
Sbjct: 405 GRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYV 464
Query: 106 VLSNVH 111
+L+N++
Sbjct: 465 LLANLY 470
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +G++ N V F+AVLTAC+ LV+ + F+S+ +F + P +EHY V DLL
Sbjct: 428 LFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F L SAC++H + ++ +V R+LE+ P + Y+
Sbjct: 488 GRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYI 547
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 548 LLANIYS 554
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 17/124 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +K ++ + +TFVA LTAC+ LVE G L S+ ++ + P MEHY C VDL GRA
Sbjct: 496 QMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRA 555
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQP-EHCRRYVVL 107
G L EA + S AC+ G ++L+ +V LLEL+P EHC YV+L
Sbjct: 556 GYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHC-TYVIL 614
Query: 108 SNVH 111
SN++
Sbjct: 615 SNMY 618
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G+ N VTF+ +L AC A LV G LF +L E+ + P EHYGC+VDL+GRA
Sbjct: 317 QMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRA 376
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
L+ EA N +W +AC +HG ++L K++LEL P H YV+LS
Sbjct: 377 KLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLS 436
Query: 109 NVH 111
N+H
Sbjct: 437 NIH 439
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 19/127 (14%)
Query: 4 EMYEKGLRA----NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+M+ + LRA +EVTFV VLTAC A LV+ G E F S+ + + P + HYGC++D+
Sbjct: 380 DMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDV 439
Query: 60 LGRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG L EA N +W ++C+++G ++ +RLLEL P++ Y
Sbjct: 440 LGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAY 499
Query: 105 VVLSNVH 111
++LSN++
Sbjct: 500 ILLSNMY 506
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + + +VTF+ VL AC+ + LVE G F S+ ++ + P EHYGCVVDLL
Sbjct: 409 LFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLL 468
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ EA +F +W S+C +H V++ E K+++ L P H Y+
Sbjct: 469 GRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYI 528
Query: 106 VLSNVH 111
+LSN++
Sbjct: 529 LLSNIY 534
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ N++TF +LTAC+ A LV LF S+ P +EHYGC+VDLLGRA
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRA 400
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L +AC IHG ++L ++GK L+++ P H RY+ L+
Sbjct: 401 GLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLA 460
Query: 109 NVH 111
++H
Sbjct: 461 SIH 463
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ N++TF +LTAC+ A LV LF S+ P +EHYGC+VDLLGRA
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRA 400
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L +AC IHG ++L ++GK L+++ P H RY+ L+
Sbjct: 401 GLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLA 460
Query: 109 NVH 111
++H
Sbjct: 461 SIH 463
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M +GL+ ++VTF+ +++AC+ + LV G F+++ +F ++P MEHY C+VDLL
Sbjct: 514 LFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLL 573
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL E + F+ W SAC+++ V+L V K++ +L PE +V
Sbjct: 574 SRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFV 633
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 634 LLSNMYS 640
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N +TF++VL AC+ A +E G F+++ E+ V P +EHYGC+VDLLGRA
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA LW +AC+IH V+L+ + L +L P +C YV+L+
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504
Query: 109 NVH 111
N++
Sbjct: 505 NIY 507
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +G+R N +TF AVL AC+ LVE G ELF S+ + V P +EHYGC+VDLLGR
Sbjct: 312 NRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGR 371
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA E +W AC IH L +VG L+E+ +H RY+ L
Sbjct: 372 SGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQL 431
Query: 108 SNV 110
+ +
Sbjct: 432 ATI 434
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 75/117 (64%), Gaps = 15/117 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
+ +++TFV +L+AC+ + L++LG ++F S+ ++ + P +EHYGC++DLLG +GL EA
Sbjct: 400 VEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEA 459
Query: 70 NEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E +W ACK HG ++L+ ++L++++PE+ YV+LSN++
Sbjct: 460 EEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIY 516
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G++ N +TFV+VL C+ A +V GLE FH ++G+F +VP+ EHYGCV+DLLGRAG
Sbjct: 409 MALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAG 468
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQ-PEHCRRYVVLS 108
L EA E L W+ ACK+H + + K +L P YV+LS
Sbjct: 469 WLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLS 528
Query: 109 NVHT 112
N++T
Sbjct: 529 NMYT 532
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M G++ +E+TFV +L AC+ + V G + + ++P +HY CV+D+L
Sbjct: 454 MFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDML 513
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L EA N +W S+C++HG L+ GKRL EL+PEHC YV
Sbjct: 514 GRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYV 573
Query: 106 VLSNVH 111
++SNV+
Sbjct: 574 LMSNVY 579
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G+R + V F+A+L+AC+ A LV+ GL F ++G++ + P E YGCVVDLL
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA E + S ACK H L R+L+L+P YV
Sbjct: 459 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYV 518
Query: 106 VLSNVH 111
+LSN++
Sbjct: 519 MLSNIY 524
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + ++ +E+TF+ +L AC+ LVE G E F ++ EF +VP ++HYG +VDLL
Sbjct: 320 MFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLL 379
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A EF LW +AC H ++L+ +V +R+LEL H YV
Sbjct: 380 GRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYV 439
Query: 106 VLSNVH 111
+LSN++
Sbjct: 440 ILSNLY 445
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G++ + +TFVAVL+AC A V+LG+E F+S++ ++ V +HY CVVDLL
Sbjct: 315 LFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLL 374
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA + L AC+IH ++L+ K LL L PE YV
Sbjct: 375 GRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYV 434
Query: 106 VLSNVH 111
L+NV+
Sbjct: 435 QLANVY 440
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + + ++VT V VLTACA +V G F+ ++ + + P MEHYGC+VDL GRA
Sbjct: 318 EMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRA 377
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA + L+ ACKIH + L +G R++EL P++ RYV+L+
Sbjct: 378 GLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLA 437
Query: 109 NV 110
N+
Sbjct: 438 NL 439
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM K +R N VTF+++LTAC A +E G F S++ ++ + P +EHYGC+VDLL
Sbjct: 327 MFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLL 386
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
+AGLL +A N F+W A CK+H ++++H + L+ L+P + Y
Sbjct: 387 SKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYS 446
Query: 106 VLSNVH 111
+L N++
Sbjct: 447 LLVNMY 452
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G NE TF++VL+AC+ A LV+ G E F S+ ++ + P MEHYG +VDLL
Sbjct: 617 LFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLL 676
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ ACK+H V+L+ E +R+ EL+PE +V
Sbjct: 677 GRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHV 736
Query: 106 VLSNVH 111
+L+N++
Sbjct: 737 LLANIY 742
>gi|302780855|ref|XP_002972202.1| hypothetical protein SELMODRAFT_96876 [Selaginella moellendorffii]
gi|300160501|gb|EFJ27119.1| hypothetical protein SELMODRAFT_96876 [Selaginella moellendorffii]
Length = 485
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G++ N +TFV+VL C+ A +V GLE FH ++G+F +VP+ EHYGCV+DLLGRAG
Sbjct: 221 MALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAG 280
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQ-PEHCRRYVVLS 108
L EA E L W+ ACK+H + + K +L P YV+LS
Sbjct: 281 WLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLS 340
Query: 109 NVHT 112
N++T
Sbjct: 341 NMYT 344
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G+R + V F+A+L+AC+ A LV+ GL F ++G++ + P E YGCVVDLL
Sbjct: 383 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 442
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA E + S ACK H L R+L+L+P YV
Sbjct: 443 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYV 502
Query: 106 VLSNVH 111
+LSN++
Sbjct: 503 MLSNIY 508
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + + +EVTF+ VL AC LV G F S+ EF + P +EHYGC+VDLLGRAG
Sbjct: 335 MIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAG 394
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L AC+IHG ++L K+LLEL+P + YV+L+N
Sbjct: 395 FLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLAN 454
Query: 110 VH 111
++
Sbjct: 455 LY 456
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
E ++ + +T++AVL+ C+ +L ++GLE+F++++ G+ + P + HYGCVVDLLGRAG
Sbjct: 359 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 418
Query: 66 LSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA +F+ W + C++H V++ VG++LLEL+PE+ YV+LSN+
Sbjct: 419 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNL 478
Query: 111 H 111
+
Sbjct: 479 Y 479
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + +EV F+AVLTAC + V+LGL F S+ ++ + P ++HY VVDLLGRA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA+E L+ ACK H + + V + LLEL PE C Y+ L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 109 NVH 111
H
Sbjct: 504 KTH 506
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL 41
EM EKGL+ NE T AVL+AC+++ + G+ + +L
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + ++ + +TFV++L+AC+ + LV G E F+S+ +F V P EHY C+VD+L
Sbjct: 298 LFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA +F L AC+IH V L+ V + L +L P + RYV
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYV 416
Query: 106 VLSNVHT 112
+L N++T
Sbjct: 417 ILYNIYT 423
>gi|413938708|gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G+ N VTFVAVL+AC+ LV+ G + F L+ + P+++HYGC+VDLLGRA
Sbjct: 288 EMRQVGIEPNGVTFVAVLSACSHGGLVDEGFKYF-DLMRSMGIRPMIQHYGCLVDLLGRA 346
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA +WS AC+ HG V+++ +L E +P H YV+LS
Sbjct: 347 GFLKEAFNLASNLPEDPGFVIWSSLLAACRSHGNVEMAELTASKLAEAKPSHGSSYVLLS 406
Query: 109 NVH 111
N +
Sbjct: 407 NTY 409
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G N+ TFV VL CA LV+ G +LF S+ +F+V P +EHYGCVVDLL
Sbjct: 327 LFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLL 386
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G + EA + LW SAC+ +G +++ K L+ L+P + YV
Sbjct: 387 GRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVRLEPWNSGNYV 446
Query: 106 VLSNVHT 112
+LSNV+
Sbjct: 447 LLSNVYA 453
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M KG++ + VTF+ VL+AC+RA VE G FHS+ + +VPI +HY C++DL
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA EF L SAC++ G +++ + LLE+ P++ YV
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYV 580
Query: 106 VLSNVH 111
+L ++H
Sbjct: 581 LLCSMH 586
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 77/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L+E G F+ + +F + P +EHY C+VDLL R
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 63 AGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A EF+ W A C+ + ++L+ +V +R+ EL+PE+ YV+L
Sbjct: 582 TGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 108 SNVH 111
+N++
Sbjct: 642 ANIY 645
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D G++ + VTFV VL+ACA A LV+ GLE+FHS+ ++ + +HY CV+DLL R
Sbjct: 359 DMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSR 418
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G A N+FLW++ C+IH V L+ + L E++PE+ YV L
Sbjct: 419 SGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTL 478
Query: 108 SNVHT 112
+N++
Sbjct: 479 ANIYA 483
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M ++ ++ + VTFV++L AC+ A LV+ G F + + +VPI +HY C+VD+L
Sbjct: 460 LFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDML 519
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ S AC+IHG V++ + L EL PE+ YV
Sbjct: 520 GRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYV 579
Query: 106 VLSNVHT 112
++SN++
Sbjct: 580 LMSNMYA 586
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ + V FVA++ AC+ + LVE GL FH + ++++ P +EHY CVVDLL R+
Sbjct: 445 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 504
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL +A +F L SAC++ G +++ V +R++EL P+ YV++S
Sbjct: 505 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 564
Query: 109 NVH 111
N++
Sbjct: 565 NIY 567
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M E GL+ + +TF+ +L+AC+ + LV+ GL F ++ + V P EHY C++DLL
Sbjct: 416 MFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLL 475
Query: 61 GRAGLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG E ++ +WSA C+IH ++L +V +R++EL+P+ YV
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 106 VLSNVHT 112
L++++
Sbjct: 536 SLASLYA 542
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M ++M E GL+ + +TF+ +L+AC+ + LV+ GL F ++ + V P EHY C++DLL
Sbjct: 416 MFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLL 475
Query: 61 GRAGLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG E ++ +WSA C+IH ++L +V +R++EL+P+ YV
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 106 VLSNVHT 112
L++++
Sbjct: 536 SLASLYA 542
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ + V FVA++ AC+ + LVE GL FH + ++++ P +EHY CVVDLL R+
Sbjct: 608 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 667
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL +A +F L SAC++ G +++ V +R++EL P+ YV++S
Sbjct: 668 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 727
Query: 109 NVH 111
N++
Sbjct: 728 NIY 730
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M G++ + +T +++++AC+ L+ELGLE FHS+ E+ + P ++HY C+VDLLGR
Sbjct: 611 DDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGR 670
Query: 63 AGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA + L +AC +HG V L ++ +R LEL P Y++L
Sbjct: 671 GGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLL 730
Query: 108 SNVH 111
+N++
Sbjct: 731 ANLY 734
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ NEVTFVA L+AC+ A +VE GL+++ S+ F V PI HY C+VD+LGRAG +EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E L AC+ H + ++ K+L+E++PE+ Y++LSN++
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMY 545
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G + + +TF A+LTAC+ A L +LG LFH + ++ + P +EHY C+VDLL
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLL 435
Query: 61 GRAGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E F+W AC+ HG ++L+ KRL EL+PE+ +
Sbjct: 436 GRAGKLVEAYEMMKTMRMEPDLFVWGALLGACRNHGNMELARIAAKRLAELEPENSGNGL 495
Query: 106 VLSNVH 111
+L++++
Sbjct: 496 LLTSLY 501
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ N VTFVAVL+ACA A L++ G +F S+ E+ VVP +EH+ C+VD+ GR G
Sbjct: 301 MKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGG 360
Query: 65 LLSEANEF------------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL+EA +F +W+ ACK+H L EV + L+ +PE+ YV+LS
Sbjct: 361 LLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLS 420
Query: 109 NVHT 112
N++
Sbjct: 421 NMYA 424
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 77/124 (62%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L+E G F+ + +F + P +EHY C+VDLL R
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G LS+A EF +W A C+ + ++L+ +V +R+ EL+PE+ YV+L
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLL 641
Query: 108 SNVH 111
+N++
Sbjct: 642 ANIY 645
>gi|302785287|ref|XP_002974415.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
gi|300158013|gb|EFJ24637.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
Length = 659
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 19/128 (14%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V EM +G+ + +T+V +L AC+ A L+E G + F +L+ + + EHYGCVVDLL
Sbjct: 532 LVREMQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLL 591
Query: 61 GRAGLLSEANEFL---------------W----SACKIHGAVKLSHEVGKRLLELQPEHC 101
GRAG L+EA EFL W SAC +HG ++L+ +R+L+L+P H
Sbjct: 592 GRAGKLAEAEEFLLGLRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLEPRHP 651
Query: 102 RRYVVLSN 109
+VVLSN
Sbjct: 652 AAFVVLSN 659
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G + N V+F +VL+AC+ + L GL+LFHS++ +F + P + HYGC+VDLLGR
Sbjct: 658 QMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRG 717
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G SEA F L S+C+I KL + +L+EL+P + +++LS
Sbjct: 718 GHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLS 777
Query: 109 NVH 111
N++
Sbjct: 778 NIY 780
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D+M G++ + +T + +L AC+ + LV+ GL L+ S+ V+P EHY C++DLL
Sbjct: 404 MFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLL 463
Query: 61 GRAG-----------LLSEANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + + N+ +W+A C++HG ++ EV ++++EL P+ YV
Sbjct: 464 GRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYV 523
Query: 106 VLSNVH 111
+LS++H
Sbjct: 524 LLSSIH 529
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G + +TF+A+L+ C+ A L + G LF + ++ + P +EHY C+VD+LGRA
Sbjct: 370 EMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRA 429
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA E +W ++C++HG V L+ V KRL EL+P + YV+LS
Sbjct: 430 GRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 489
Query: 109 NVH 111
N++
Sbjct: 490 NIY 492
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ +R +E+TFVAVL AC+ +V+ G E F+ + + + P ++HYGC+VD+LGRA
Sbjct: 368 KMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRA 427
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF +W AC++HG ++L+ ++LL+ + + YV+LS
Sbjct: 428 GLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLS 487
Query: 109 NVHT 112
N++
Sbjct: 488 NIYA 491
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM E G++ + VTF+ +++AC A LV+ G+ F + E+ + MEH+ C+VDL
Sbjct: 669 LFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLY 728
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + + S AC++HG V+L+ K L+EL P + YV
Sbjct: 729 GRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYV 788
Query: 106 VLSNVH 111
+LSNVH
Sbjct: 789 LLSNVH 794
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + G+R N+VTF+A+L+AC+ V+LG LF+S+ ++ + P +EHYGC++DLL
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA+E +W +A +H ++L L++L+P + Y+
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYM 457
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 458 LLANLYS 464
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M KG++ + VTF+ VL+AC+R+ LV+ G FHS+ + ++VP+ +HY C++DL
Sbjct: 466 LFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLY 525
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L +A EF+ W SAC++ G +++ + LL+L P++ YV
Sbjct: 526 SRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYV 585
Query: 106 VLSNVH 111
+L ++H
Sbjct: 586 LLCSMH 591
>gi|357150678|ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+ N+VTFVAVL AC+ LV+ G + F+ ++ + + P ++HYGC+VDLLGRA
Sbjct: 292 EMRELGIEPNDVTFVAVLNACSHGGLVDEGFKYFN-MMRKMGIRPSIQHYGCLVDLLGRA 350
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA WS AC+ HG V ++ ++L + +P H YV+LS
Sbjct: 351 GFLEEAFNLASSLPKDPGFVTWSSLLAACQTHGNVDMAEVAAQKLADAEPNHGSSYVLLS 410
Query: 109 NVH 111
N +
Sbjct: 411 NAY 413
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G + + V++ LTAC+ A LV GLELF ++ ++ P +EHYGC+VDL GRAG
Sbjct: 319 MQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAG 378
Query: 65 LLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A NE L +AC+ HG V L+ + K L +L PE YV+LSN
Sbjct: 379 RLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSN 438
Query: 110 VH 111
++
Sbjct: 439 IY 440
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G + + V++ LTAC+ A LV GLELF ++ ++ P +EHYGC+VDL GRAG
Sbjct: 319 MQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAG 378
Query: 65 LLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A NE L +AC+ HG V L+ + K L +L PE YV+LSN
Sbjct: 379 RLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSN 438
Query: 110 VH 111
++
Sbjct: 439 IY 440
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+ N++TFVA+L+AC+ A +V+ G +L + + + P +EHYGCV+DLL RA
Sbjct: 284 EMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARA 343
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQP 98
GLL EA E L C+IHG +L VGKRL+ LQP
Sbjct: 344 GLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQP 393
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM+ G+ NEVTF+ +L AC+ LV G + F + ++++ P EHYGC++DLLGRA
Sbjct: 405 EMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRA 464
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA E L AC+IHG V + V ++L EL P+ Y++++
Sbjct: 465 GLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMT 524
Query: 109 NVHT 112
N+++
Sbjct: 525 NLYS 528
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G + N V+F +VL+AC+ + L GL+LFHS++ +F + P + HYGC+VDLLGR
Sbjct: 658 QMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRG 717
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G SEA F L S+C+I KL + +L+EL+P + +++LS
Sbjct: 718 GHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLS 777
Query: 109 NVH 111
N++
Sbjct: 778 NIY 780
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KG+ +E F AVL+AC+ + LV+ G E+F+ + ++ V P HY C+VDLLGRA
Sbjct: 420 EMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRA 479
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA NE +W SAC++H VKL+ ++L EL P+ YV LS
Sbjct: 480 GYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLS 539
Query: 109 NVH 111
N++
Sbjct: 540 NIY 542
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +GL + + FVA+L AC+ A L+++G F+S+ EF + P +EHY C+VDLL
Sbjct: 270 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 329
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA NE +W AC+IH + + LL L P+ YV
Sbjct: 330 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 389
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 390 LLSNIYA 396
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
EK NEVTF+ VL AC+ +VE G F + ++ + P ++HYG +VD+LGRAGL+
Sbjct: 347 EKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLV 406
Query: 67 SEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA N +W +AC++HG ++L+ +V + LLEL+P+H YV+L+N++
Sbjct: 407 EEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMY 466
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 19/130 (14%)
Query: 1 MVDEMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCV 56
M E++EK G + NEVTFV VLTAC L LF + ++ + P +EHYGCV
Sbjct: 306 MALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCV 365
Query: 57 VDLLGRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHC 101
VD+L R+G + +A F L + C +HG +L +VGK L+E +P+H
Sbjct: 366 VDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHS 425
Query: 102 RRYVVLSNVH 111
RYV+L+N++
Sbjct: 426 GRYVLLANMY 435
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ N++TF +LTAC+ A LV LF S+ P +EHYGC+VDLLGRA
Sbjct: 293 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRA 352
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L +AC IHG ++L ++GK L+++ P H RY+ L+
Sbjct: 353 GLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLA 412
Query: 109 NVH 111
++H
Sbjct: 413 SIH 415
>gi|356506146|ref|XP_003521848.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 503
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + GLR N VTF+ VL+AC+ LVE G+ F ++ ++ +VP ++HYGCV+D+LGR
Sbjct: 349 ESMEKTGLRPNHVTFLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGR 408
Query: 63 AGLLSE------------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L E AN +W AC +H V++ V ++LE++ H YV+
Sbjct: 409 AGRLEEAEKVALQVPHEVANAVMWRTLLGACSVHNNVEIGQRVTNKILEMERGHGGDYVL 468
Query: 107 LSNV 110
+SN+
Sbjct: 469 MSNI 472
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +GL + + FVA+L AC+ A L+++G F+S+ EF + P +EHY C+VDLL
Sbjct: 380 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 439
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA NE +W AC+IH + + LL L P+ YV
Sbjct: 440 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 499
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 500 LLSNIYA 506
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+R ++V F+ VLTAC+ A +V+ G F S+ + + P +EHYGC+VD+ GR
Sbjct: 337 EEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGR 396
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ A EF +W +AC+ HG ++L + + LL P H YV+L
Sbjct: 397 AGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVML 456
Query: 108 SNVHT 112
SNV+
Sbjct: 457 SNVYA 461
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G++ NEVTFV ++ AC+ LV G LF S++ +F + P ++HY C++DL
Sbjct: 332 LYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLF 391
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA +E W SACK HG K++ + LL+L+PE Y+
Sbjct: 392 SRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYI 451
Query: 106 VLSNVH 111
+LSN++
Sbjct: 452 LLSNIY 457
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
+ G+R +E TF+ +L C V G + F+++ F + P +EHYGC+VDLLGRAGLL
Sbjct: 410 KHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLL 469
Query: 67 SEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA N +W A CK+H L+ +V K+L+EL+P + YV LSN++
Sbjct: 470 NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIY 529
Query: 112 T 112
+
Sbjct: 530 S 530
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM E+G+ N +TFV+VL AC+ LVE G +LF S++ E+ V P EHY C+VDLLGR
Sbjct: 549 EEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGR 607
Query: 63 AGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA E + S AC+IHG V+ + L +L+P + YV+L
Sbjct: 608 AGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLL 667
Query: 108 SNVHT 112
++++
Sbjct: 668 ADIYA 672
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ + VTFV VL+AC+ V+ GLE+F S+ ++ V P EHY C+VDLLGRA
Sbjct: 421 EMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRA 480
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL++ EA+ +W AC+ H + L+ K+LL+L+P++ Y++LS
Sbjct: 481 GLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLS 540
Query: 109 NVHT 112
N++
Sbjct: 541 NIYA 544
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G NEVT ++VL+AC+ A LV G LF ++ + P ++HYGC+VDLLGRA
Sbjct: 578 DMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRA 637
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L SAC +HG + L+ GK ++EL+P+ Y++L
Sbjct: 638 GLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLW 697
Query: 109 NVH 111
N++
Sbjct: 698 NIY 700
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + ++ N+VTF+ VL+AC+ LV+ G F S+ ++V P +EHYGCVVD+LGRA
Sbjct: 359 KMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRA 418
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + S AC+I+ V+++ E LLEL+P YV+LS
Sbjct: 419 GRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLS 478
Query: 109 NVHT 112
N+++
Sbjct: 479 NIYS 482
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Query: 1 MVDEMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCV 56
M E++EK G + NEVTFV VLTAC L LF + ++ + P +EHYGC+
Sbjct: 342 MALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCI 401
Query: 57 VDLLGRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHC 101
VD+L R+G + +A F L + C +HG +L +VGK L+E PEH
Sbjct: 402 VDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHS 461
Query: 102 RRYVVLSNVH 111
RYV+L+N++
Sbjct: 462 GRYVLLANMY 471
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
+ G+R +E TF+ +L C V G + F+++ F + P +EHYGC+VDLLGRAGLL
Sbjct: 410 KHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLL 469
Query: 67 SEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA N +W A CK+H L+ +V K+L+EL+P + YV LSN++
Sbjct: 470 NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIY 529
Query: 112 T 112
+
Sbjct: 530 S 530
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M E + +VTF+ VL AC+ LVE G F S+ ++ + P +EHYGC+VDLL
Sbjct: 461 LFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLL 520
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ EA +F+ W SAC +H V++ E K+++ L P H Y+
Sbjct: 521 GRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYI 580
Query: 106 VLSNVH 111
+LSN +
Sbjct: 581 LLSNTY 586
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E + +E+T++ VL AC A +VE G F S+ + + P + HYGC+VDLL
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLL 487
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA+E L AC++H V+L+ K++LEL+PE+ YV
Sbjct: 488 GRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYV 547
Query: 106 VLSNVH 111
+L N++
Sbjct: 548 LLCNIY 553
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+ + N VTF+ VL AC+ A LVE G + F S++ E + P EHYGC+VDL RA
Sbjct: 441 MKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRAN 500
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A E L SAC+ HG ++L RLLEL+P+H VVLSN
Sbjct: 501 HLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSN 560
Query: 110 VH 111
++
Sbjct: 561 IY 562
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
++E R +E+TF+ VL AC+ LV+ G F + ++ + P ++HYGC+VDLLGRAG
Sbjct: 311 LHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAG 370
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W +AC+ +G V+L +V K L+EL+P+H YV+L+N
Sbjct: 371 LFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLAN 430
Query: 110 VH 111
++
Sbjct: 431 MY 432
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G R N VTF+AV++AC+ LV G E F S+ ++ + P +HY +VDLLGRA
Sbjct: 283 KMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRA 342
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF L AC++HG + + K+ +L+PE+ +YVVLS
Sbjct: 343 GRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLS 402
Query: 109 NVH 111
N +
Sbjct: 403 NAY 405
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G++ N VT V VL AC+ A LVE GL FHS+ F + P EHYGC++DLL
Sbjct: 250 LFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLL 309
Query: 61 GRAGLLSEA----NEF-----------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA NE L +AC++H V ++ K++L L P+ YV
Sbjct: 310 GRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYV 369
Query: 106 VLSNVH 111
+LSN++
Sbjct: 370 LLSNIY 375
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM ++G++ N VTFVAVL+AC+ A VE GL F+S+ G F + P EHY CVV LL
Sbjct: 529 MFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLL 587
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA EF+ W SAC+I G V+L + + P+ Y+
Sbjct: 588 GRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYI 647
Query: 106 VLSNV 110
+LSN+
Sbjct: 648 LLSNI 652
>gi|225445120|ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera]
gi|297738768|emb|CBI28013.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G+R N VTF+ VL+AC V+ G F + + +VP M+HYGC+VDLLGRAG
Sbjct: 324 MREAGVRPNHVTFIGVLSACVHGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAG 383
Query: 65 LLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL E AN +W AC+ +G VK+ V + LLEL+P + +VVLSN
Sbjct: 384 LLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSN 443
Query: 110 VH 111
++
Sbjct: 444 IY 445
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +GL + + FVA+L AC+ A L+++G F+S+ EF + P +EHY C+VDLL
Sbjct: 215 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 274
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA NE +W AC+IH + + LL L P+ YV
Sbjct: 275 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 334
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 335 LLSNIYA 341
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M +G + VTFV +L+AC LV+ G F S++ + +VP +EHYGC+VDLL
Sbjct: 393 MFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLL 452
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F +W+ AC+++ V+++ +RL+EL+P + +V
Sbjct: 453 GRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFV 512
Query: 106 VLSNVH 111
++SN++
Sbjct: 513 MVSNIY 518
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M ++G + + VTFV VL+AC+ +VE G +S+ E+ + P HY C+VDLLGR
Sbjct: 740 DLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGR 799
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA F LW +ACK+HG ++L KR++EL+P YV L
Sbjct: 800 SGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTL 859
Query: 108 SNV 110
SN+
Sbjct: 860 SNI 862
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+R N +TFV+VL AC+ A L G F+++ G F V P +EHYGC+VDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A + +WS AC+IH V+L+ RL EL +C Y++LS+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498
Query: 110 VH 111
++
Sbjct: 499 IY 500
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+R N +TFV+VL AC+ A L G F+++ G F V P +EHYGC+VDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A + +WS AC+IH V+L+ RL EL +C Y++LS+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498
Query: 110 VH 111
++
Sbjct: 499 IY 500
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M G+R ++V F+ VLTAC+ A +V+ G F S+ E+ + P +EHYGC+VD+ GR
Sbjct: 325 EAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGR 384
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ A EF +W +AC+ HG ++L + + LL P H YV+L
Sbjct: 385 AGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVML 444
Query: 108 SNVHT 112
SNV+
Sbjct: 445 SNVYA 449
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G+ N VTFV VL+AC+ LV+ G++ F S+ +VP EHY CVVDLL
Sbjct: 763 LFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLL 822
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLLS A F L SAC +H + + LLEL+P+ YV
Sbjct: 823 GRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYV 882
Query: 106 VLSNVH 111
+LSN++
Sbjct: 883 LLSNMY 888
>gi|147772248|emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
Length = 538
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 76/124 (61%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++ L+ N +TF++VL AC+ LVE GL+ F ++ ++++ P ++HYGC++D+LGR
Sbjct: 316 ERMQKECLKPNRITFLSVLNACSHGGLVEEGLKFFTKMVNKYQISPDVKHYGCLIDMLGR 375
Query: 63 AGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L EA N +W AC HG V++ V +++LE++ ++ YV+
Sbjct: 376 AGRLDEAEKMALEIPNYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMEKKYGGDYVL 435
Query: 107 LSNV 110
LSN+
Sbjct: 436 LSNI 439
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA--- 69
+EVTF+ VLTAC A LV+ G E F S+ + + P + HYGC++DL GRAG ++EA
Sbjct: 377 DEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDA 436
Query: 70 --------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
N +W +AC++HG ++ V +RLL++ PE+ Y +LSN++
Sbjct: 437 IDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIY 490
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G++ NEVTFV VL AC+ VE G LF + + + P M+HYGC+VD+LGRAG
Sbjct: 402 MLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAG 461
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A + L+ AC +H A ++ +G L+ QP H Y +L+N
Sbjct: 462 YLEDAKQIIDNMPMKPSPGVLGALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLAN 521
Query: 110 VH 111
++
Sbjct: 522 LY 523
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Query: 4 EMYEKG-LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+M E+G + NE+TF+ VLT+C+ LVE G FH + + + P +EHYGC+VDLLGR
Sbjct: 422 QMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGR 481
Query: 63 AGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
A LL+EA +F +W AC+ G V L+ V +R+ EL+P C V+L
Sbjct: 482 AKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLL 541
Query: 108 SNVHT 112
SNV+
Sbjct: 542 SNVYA 546
>gi|357450533|ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 958
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 81/126 (64%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M ++G++ + +TFVAVL AC+ A LV+ G ++F +L+GE+ + P++EHY C++DLL
Sbjct: 776 LFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVF-TLMGEYGIKPVVEHYNCMIDLL 834
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA ++ LW+ AC + + V ++++EL+P+ YV
Sbjct: 835 GRAGFIDEAECLLENADCRYDKSLWAALLGACTKCSDYRTAERVARKMIELEPDFHLSYV 894
Query: 106 VLSNVH 111
+L+N++
Sbjct: 895 LLNNIY 900
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GL N +TFVAVL+ACA A LV G +F S+ E+ +VP +EH+ C+VD+LGRA
Sbjct: 303 EMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRA 362
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA F +W+ ACK+H L +V + L +P + YV+LS
Sbjct: 363 GLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILS 422
Query: 109 NVH 111
N++
Sbjct: 423 NIY 425
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + ++ + VT VAVLTAC+ + LV G LF ++ +VP +EHY C+ DL
Sbjct: 507 LFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLF 566
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL++A EF +W+ AC+IHG ++ +LLE++P+H YV
Sbjct: 567 GRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYV 626
Query: 106 VLSNVH 111
+++N++
Sbjct: 627 LIANMY 632
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G+ N VT +VL CAR ++ G E ++ + + + +VD+ R+
Sbjct: 408 EMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRS 467
Query: 64 GLLSEA----------NEFLWSACKIHGAVKLSHEVGKRL------LELQPEHCRRYVVL 107
G + EA +E +++ + +K E +L LE++P+H VL
Sbjct: 468 GRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVL 527
Query: 108 S 108
+
Sbjct: 528 T 528
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M G + + VAVL+AC+ A LVE G E+F+S+ F + P EHY C+VDLL
Sbjct: 522 MFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLL 581
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA+E L ++C++H V ++ + +L L+PE Y+
Sbjct: 582 GRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYM 641
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 642 LLSNIYS 648
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G N+VT +A+LTAC+ A +E GLE+F S+ +F V P +EHY C VD+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + +A E + S ACK H + L+ K+L E +P++ YV+LS
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 109 NVH 111
+++
Sbjct: 542 SIN 544
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM E G +EVTFVA+L C+RA +V G ELFHS+ ++ +VP ++HY C+VDLL R
Sbjct: 587 NEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSR 646
Query: 63 AGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L+E F+ W A C+IH ++L K +LEL+P +V+L
Sbjct: 647 VGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLL 706
Query: 108 SNVH 111
S+++
Sbjct: 707 SDLY 710
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + + +++TFV +L+AC+ + +++LG +F S+ ++++ P +EHYGC++DLLG +G
Sbjct: 415 MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 474
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+HG V+L + L++++P++ YV+LSN
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534
Query: 110 VH 111
++
Sbjct: 535 IY 536
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G + ++VTF+ VL+AC+RA LV+ G ++F S++ E ++PI +HY C++DL
Sbjct: 463 LFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLF 522
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L EA +F L S+C+ H +++ + LL+L+P + Y+
Sbjct: 523 SRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYI 582
Query: 106 VLSNVH 111
+LS+++
Sbjct: 583 LLSSIY 588
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R + VTF+++L AC+ + LVE G LF + + + P +EHYGC+VDL GRA
Sbjct: 329 EMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRA 388
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
L +A EF +W AC IHG ++L+ V RL E+ P + +V+LS
Sbjct: 389 ARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLS 448
Query: 109 NVH 111
NV+
Sbjct: 449 NVY 451
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM EKG +E+T + +L AC + L E GL LF+++ ++ + P++EHY C+VDLL
Sbjct: 398 LYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLL 457
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LS+A + LW + CK+ G + L K LL+L P+ YV
Sbjct: 458 GRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYV 517
Query: 106 VLSNVH 111
++SN++
Sbjct: 518 LVSNIY 523
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M G+ NEVTFV +L AC+ A LV+ G + F S+ ++ + P++EHY C+VDLL
Sbjct: 637 MYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLL 696
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G + A +F +WS ACKIH ++ ++L +P + YV
Sbjct: 697 GRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYV 756
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 757 MLSNIYS 763
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M ++G N+VTFVAVL+ACA A LV G + F S+ + +VP EHY +VD+
Sbjct: 297 LFDLMRQQGPPPNDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMY 356
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAGLL +A +F+ W+ ACK+H L EV +RL+ L+PE+
Sbjct: 357 GRAGLLDDAMQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHR 416
Query: 105 VVLSNVHT 112
V+LSN++
Sbjct: 417 VLLSNIYA 424
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE-FEVVPIMEHYGCVVDLLGR 62
EM G + TFVA L+ACA+A ++LG E+ ++ E E+ ++ +V++ R
Sbjct: 199 EMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLG--AALVNMYAR 256
Query: 63 AGLLSEANEFL 73
GL+++A E+
Sbjct: 257 CGLVNKAREWF 267
>gi|413925046|gb|AFW64978.1| hypothetical protein ZEAMMB73_457124 [Zea mays]
Length = 592
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NEVTF+ VLT+C+ LVE G F + + + P +EHYGC+VDLLGRA LL
Sbjct: 256 EGKVMPNEVTFLGVLTSCSHGGLVEQGFHHFQRMSMVYNLAPRIEHYGCMVDLLGRAKLL 315
Query: 67 SEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F+ W AC+ G V L+ V +R+LEL+P+ C +V+LSNV+
Sbjct: 316 TEAEQFINGMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVY 375
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M +G ++VTFV +L AC + +V+ G +F S F ++P +EHYGC+VDLL
Sbjct: 269 LYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLL 328
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E + S AC HG V+L+ + L L+P + YV
Sbjct: 329 GRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVELAEIAAESLFVLEPWNPGNYV 388
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 389 ILSNIYA 395
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ N +TFV++L AC+ A L+E G F S+ E+ V P ++HY C+VDLLGRAG
Sbjct: 344 MLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 403
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA +E LW AC+IH + L+ V + LL+LQ + YV+LSN
Sbjct: 404 RLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSN 463
Query: 110 VHT 112
++
Sbjct: 464 IYA 466
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + NE+TFV++L+AC+ A LVE + F + E+ + P+M+HYGC++D+
Sbjct: 481 LFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMF 540
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A NE +WS+ C+ HG ++L+ RLLEL+P+ YV
Sbjct: 541 VRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYV 600
Query: 106 VLSNVH 111
+L N++
Sbjct: 601 LLLNMY 606
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M KG R + VTF VLTAC+ A L + GL + ++ E + MEHYGCVVDLLGR
Sbjct: 293 EAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGR 352
Query: 63 AGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA NE L + C++HG V ++ ++ + LLE P YV+L
Sbjct: 353 AGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLL 412
Query: 108 SNVH 111
SN++
Sbjct: 413 SNIY 416
>gi|226507132|ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+R ++V F+ VLTAC+ A +V+ G F S+ + + P +EHYGC+VD+ GR
Sbjct: 36 EEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGR 95
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ A EF +W +AC+ HG ++L + + LL P H YV+L
Sbjct: 96 AGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVML 155
Query: 108 SNVHT 112
SNV+
Sbjct: 156 SNVYA 160
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
+ + G + + + F+ VL+ACA A LV+ GLE FHS+ + + ++HY C++DLL RAG
Sbjct: 444 LLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAG 503
Query: 65 LLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+EA ++++W+A C+IHG ++L+ K L E++PE+ YV L+N
Sbjct: 504 QFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLAN 563
Query: 110 VH 111
++
Sbjct: 564 IY 565
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M + + N+VTFVA+L AC+ VE G F S+ + V P +EHYGC+VDLLGR
Sbjct: 326 EQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGR 385
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA E +W SACKIH ++ VGK + EL P H +V+L
Sbjct: 386 AGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLL 445
Query: 108 SNVHT 112
+N+++
Sbjct: 446 ANIYS 450
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G + +++T + VL C+ + LVE GL +FH ++ + +VP +EHYGC++DLLGRA
Sbjct: 381 EMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRA 440
Query: 64 GLLSEANE---------------FLWSACKIHGAVKLSHEVGKRLLELQP-EHCRRYVVL 107
G L A E L SAC+IHG V L + + EL P H YV+L
Sbjct: 441 GRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLL 500
Query: 108 SNVH 111
SN++
Sbjct: 501 SNLY 504
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M + G+ ++VT V VL ACA LV+ GL F+S+ +F + P +EHYGC++DLL
Sbjct: 339 MFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLL 398
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N +W SACK+HG ++L + L L P+ V
Sbjct: 399 GRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRV 458
Query: 106 VLSNVH 111
+LS+++
Sbjct: 459 MLSSMY 464
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 15/119 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
G++AN VT + VL AC+ +VE GL F + + VVP MEHY C++DLLGR G L
Sbjct: 622 SGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLD 681
Query: 68 EA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+A NE +W C++HG V+L +++L ++PE+ YV+LSN +
Sbjct: 682 DAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTY 740
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ N VTF+ +L AC A LVE G LF ++ ++ + P+ EHYGC+VDLL
Sbjct: 230 LFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLL 289
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA LL +A N +W +AC++HG ++L K++LEL P H V
Sbjct: 290 GRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQV 349
Query: 106 VLSNVH 111
+LSN++
Sbjct: 350 LLSNIY 355
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++G+ ++VTF+AVL +C A L++ G++ F+S+ +++VP +EHYGC+VDLL
Sbjct: 403 LFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLL 462
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N +W AC++H V ++ EV L++L P Y
Sbjct: 463 GRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYT 522
Query: 106 VLSNVH 111
+LSN++
Sbjct: 523 LLSNIY 528
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M ++G + ++VT +A+L AC A V+ GL F+S+ + +VP +EHYGC++DLL
Sbjct: 405 LFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLL 464
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N+ +W AC++H AV L+ +V RL+ L+ Y
Sbjct: 465 GRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYS 524
Query: 106 VLSNV 110
+LSN+
Sbjct: 525 MLSNI 529
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M + G+ ++VT V VL ACA LV+ GL F+S+ +F + P +EHYGC++DLL
Sbjct: 340 MFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLL 399
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N +W SACK+HG ++L + L L P+ V
Sbjct: 400 GRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRV 459
Query: 106 VLSNVH 111
+LS+++
Sbjct: 460 MLSSMY 465
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G+ N +TFVA+L+ C+ + L G LF +++ +F V P +EHY C+VD+L
Sbjct: 365 LFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDIL 424
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G EA + +W ++C+++G V L+ V +RL E++P + YV
Sbjct: 425 GRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYV 484
Query: 106 VLSNVH 111
+LSN++
Sbjct: 485 MLSNIY 490
>gi|359475492|ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M E LR N TF+ VL AC+ + L++ G ++F ++ F V P +EHY C VDLL
Sbjct: 244 LFSKMQELSLRPNSGTFLGVLCACSHSGLLDTGRQMFLDMIPHFSVPPELEHYACYVDLL 303
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL EA N F+W A C++H ++L+ +V ++L+++ PE+ YV
Sbjct: 304 ARVGLLEEAFEVVASMPFVPNNFVWGALLQGCRLHSRLELAQDVSQKLVKVDPENSAGYV 363
Query: 106 VLSN 109
+ SN
Sbjct: 364 MFSN 367
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
+ G + ++VT+V VL+AC A LV+ GLE FHS+ + ++ +HY CV+DLL R+G
Sbjct: 415 QSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 474
Query: 67 SEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA ++FLW++ C+IHG ++L+ K L E++PE+ Y+ L+N++
Sbjct: 475 KEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIY 534
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NEV F+ VLTAC+ LVE G FH + + +VP +EHYGC+VDLLGRA LL
Sbjct: 304 EDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLL 363
Query: 67 SEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F+ W AC+ G V L+ +R+ +L+P+ C +V+LSNV+
Sbjct: 364 AEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVY 423
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E G++ + +T+V VL+AC LVE G ++ + +++P HY C++DL
Sbjct: 501 LFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLF 560
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA+ F L ++CK+H V+L+ +RLL ++PE+ Y
Sbjct: 561 GRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYS 620
Query: 106 VLSNVHT 112
L+NV++
Sbjct: 621 ALANVYS 627
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M +G ++VTFV +L AC +VE G +F S+ F ++P +EHYGC+VDLL
Sbjct: 305 LYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLL 364
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L AC H V+L+ + L L+P + YV
Sbjct: 365 GRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYV 424
Query: 106 VLSNVH 111
+LSN++
Sbjct: 425 ILSNIY 430
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ +++TFV++L+AC+ LVE G LF SL + + P MEHY C+VDLLGR G
Sbjct: 835 MIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTG 894
Query: 65 LLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+ HG K+ VGK L++ + R YV+LSN
Sbjct: 895 HLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSN 954
Query: 110 VH 111
++
Sbjct: 955 IY 956
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
K ++ NE+TFV V+ AC+ A VE G F + +++ P M H+GC+VDLLGRAGLLS
Sbjct: 373 KNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLS 432
Query: 68 EA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA N +W AC++HG V+L +RLL+L+ + YV+LSN++
Sbjct: 433 EAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIY 491
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 79/124 (63%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M G+ +EV+F+++L AC+ + L++ G ++F+ + E ++ P +EHY C+VDLL R
Sbjct: 644 NQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLAR 703
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L +A++F +W A C+IH VKL+ +V +R+ EL+PE+ YV+L
Sbjct: 704 TGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLL 763
Query: 108 SNVH 111
+N++
Sbjct: 764 ANIY 767
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M+ + +E+TF+ VL+AC+ V+ GLE+F S+ +++V P EHY C+VDLLGRA
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRA 347
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+ EA+ +W AC+ H + L+ K+LL+L+P + Y++LS
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLS 407
Query: 109 NVHT 112
N+++
Sbjct: 408 NLYS 411
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM+ G +E+TF+ VL+AC V+ GLE+F S+ +++V EHY C+VDLLGRA
Sbjct: 421 EMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRA 480
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+ EA+ +W SAC+ H + L+ K+LL+L+P Y++LS
Sbjct: 481 GKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLS 540
Query: 109 NVH 111
N++
Sbjct: 541 NLY 543
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ N VTF+ +L AC A LVE G LF ++ ++ + P+ EHYGC+VDLL
Sbjct: 362 LFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLL 421
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA LL +A N +W +AC++HG ++L K++LEL P H V
Sbjct: 422 GRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQV 481
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 482 LLSNIYA 488
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G+ NE TFV +L C A LV+ G F+S+ +F V P +EHYGC+VDLL RA
Sbjct: 397 QMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARA 456
Query: 64 GLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L E AN +W + C++H +L+ V K+L+EL+P + YV+LS
Sbjct: 457 GFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLS 516
Query: 109 NVHT 112
N+++
Sbjct: 517 NIYS 520
>gi|147860607|emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera]
Length = 610
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++ L+ N +TF++VL AC+ LVE GL+LF ++ E ++ P ++HYGC++D+LGR
Sbjct: 316 ERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGR 375
Query: 63 AGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L EA N +W AC HG V++ V +++LE++ ++ YV+
Sbjct: 376 AGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVL 435
Query: 107 LSNV 110
LSN+
Sbjct: 436 LSNI 439
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +R +E+T V VL+AC+ A L++ GL F+S++ + + P+ EHY C+VDLLGRA
Sbjct: 541 EMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRA 600
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E L AC++H +++ ++L EL+P YV+LS
Sbjct: 601 GRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLS 660
Query: 109 NV 110
N+
Sbjct: 661 NI 662
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E G+R V F+AVLTAC+ A LV+ G F+S+ +F + P +EHY V DLL
Sbjct: 416 LFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLL 475
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L EA +F+ WS AC+ H +V+L+ +V +LL + E+ Y
Sbjct: 476 GRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAY 535
Query: 105 VVLSNVHT 112
V++SN+++
Sbjct: 536 VLMSNIYS 543
>gi|115457336|ref|NP_001052268.1| Os04g0221300 [Oryza sativa Japonica Group]
gi|113563839|dbj|BAF14182.1| Os04g0221300, partial [Oryza sativa Japonica Group]
Length = 254
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ N VTF+ +L AC A LVE G LF ++ ++ + P+ EHYGC+VDLL
Sbjct: 76 LFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLL 135
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA LL +A N +W +AC++HG ++L K++LEL P H V
Sbjct: 136 GRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQV 195
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 196 LLSNIYA 202
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M + G+ ++VT V VL ACA LV+ GL F+S+ +F + P +EHYGC++DLL
Sbjct: 339 MFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLL 398
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA N +W SACK+HG ++L + L L P+ V
Sbjct: 399 GRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRV 458
Query: 106 VLSNVH 111
+LS+++
Sbjct: 459 MLSSMY 464
>gi|356501914|ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 627
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 14/125 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM E+ +R N TFV+VL+AC+ V+ GL F + E+ + P EH+GC+VDLL
Sbjct: 470 IFDEMLEEMVRPNSATFVSVLSACSHTGQVDRGLHFFRMMRIEYGLQPKPEHFGCIVDLL 529
Query: 61 GRAGLLSEANEF--------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
GR+G LSEA + L AC+ + L E+ K+LL+++PE+ VV
Sbjct: 530 GRSGRLSEAQDLMEELAEPPASVFASLLGACRCYLDSNLGEEMAKKLLDVEPENPAPLVV 589
Query: 107 LSNVH 111
LSN++
Sbjct: 590 LSNIY 594
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GLR N +TF++VL AC+ A L++ G ++++ EF + +EHYGC+VDLLGRA
Sbjct: 247 EMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRA 306
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W SAC+IH V+L+ KRL EL + YV+LS
Sbjct: 307 GCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLS 366
Query: 109 NVHT 112
N++
Sbjct: 367 NIYA 370
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++G++ + +TFV +L+AC+ + LV+ G F + ++ + P ++HYGC+VD+
Sbjct: 457 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 516
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F L SAC++HG V L + L E++PEH +V
Sbjct: 517 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 576
Query: 106 VLSNVH 111
+LSN++
Sbjct: 577 LLSNMY 582
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G+R + VTF+ +LTAC A LV+ G F+S+ + + P +EH+ C++D+L
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDML 451
Query: 61 GRAGLLSEANEFL-----W----------SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA E++ W SA ++HG V + + K LL+LQP YV
Sbjct: 452 GRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV 511
Query: 106 VLSNVH 111
+LSN++
Sbjct: 512 LLSNLY 517
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM + ++ ++VT VAVL+AC+ + LV G LF + + +VP +EH+ C+VDL
Sbjct: 469 LFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLF 528
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL++A + +W+ AC+IHG ++ ++LLE++PE+ YV
Sbjct: 529 GRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYV 588
Query: 106 VLSNVH 111
+++N+H
Sbjct: 589 LIANMH 594
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E G+ + V+FVAVL+AC+ L+E G + F ++ + + P HY C+VDLL
Sbjct: 631 LFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLL 689
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ EA + + W A C+IHG ++L + L EL+P+HC Y+
Sbjct: 690 GRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYI 749
Query: 106 VLSNVH 111
+LSN++
Sbjct: 750 LLSNMY 755
>gi|449527613|ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like, partial [Cucumis sativus]
Length = 315
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++ NE+TFVAVL AC+ A V G F+ + F++ P ++HYGC+VD+LGRA
Sbjct: 141 EMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRA 200
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA +F +W AC++HG V+L ++LL+++ + YV+LS
Sbjct: 201 GLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLS 260
Query: 109 NVHT 112
N++
Sbjct: 261 NIYA 264
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ N VTF+ +L AC A LVE G LF ++ ++ + P+ EHYGC+VDLL
Sbjct: 390 LFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLL 449
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA LL +A N +W +AC++HG ++L K++LEL P H V
Sbjct: 450 GRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQV 509
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 510 LLSNIYA 516
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + ++ + VTF+A+L+AC A LV+ G F+ ++ + ++P +EHY C++DLLGRA
Sbjct: 500 EMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRA 559
Query: 64 GLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA E L+SAC++H + L E+ + L++ P+ Y++L
Sbjct: 560 GRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILL 619
Query: 108 SNVH 111
SN++
Sbjct: 620 SNMY 623
>gi|297839315|ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333380|gb|EFH63798.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M+D+ + + N+VTF+ VL AC+ + LVE G + F S++ ++ + P H+GC+VDL
Sbjct: 263 MIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKQYFKSMIVDYNLKPRDAHFGCMVDLF 322
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L +A+EF L AC +HG V+L EV KR+ +L+ +H YV
Sbjct: 323 CRSGHLKDAHEFIKQMPIKPNAVIWRTLLGACILHGNVELGEEVQKRIFKLERDHVGDYV 382
Query: 106 VLSNVH 111
LSN++
Sbjct: 383 ALSNIY 388
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +GLR + +T+V V +AC A LV G + F + +++P + HY C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L SAC++H + L +RLL L+PE+ Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 106 VLSNVHT 112
L+N+++
Sbjct: 622 ALANLYS 628
>gi|302144057|emb|CBI23162.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++ L+ N +TF++VL AC+ LVE GL+LF ++ E ++ P ++HYGC++D+LGR
Sbjct: 316 ERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGR 375
Query: 63 AGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L EA N +W AC HG V++ V +++LE++ ++ YV+
Sbjct: 376 AGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVL 435
Query: 107 LSNV 110
LSN+
Sbjct: 436 LSNI 439
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M + G++ N+VTF+A+L+AC+ V+LG F+S+ ++ + P +EHYGC++DLL
Sbjct: 338 MFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLL 397
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W +A +H + + +L++L+P + Y+
Sbjct: 398 GRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYM 457
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 458 LLANLYS 464
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 73/121 (60%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E+GLR +++TF+ VL+AC A L++ G F+SL EF+++P +EHY C+VDLL RAG L
Sbjct: 414 EEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHL 473
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA +F L +AC+ V++S V R+++L+P + YVV S ++
Sbjct: 474 EEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIY 533
Query: 112 T 112
Sbjct: 534 A 534
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G+R + VTF+ +LTAC A LV+ G F+S+ + + P +EH+ C++D+L
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDML 451
Query: 61 GRAGLLSEANEFL-----W----------SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA E++ W SA ++HG V + + K LL+LQP YV
Sbjct: 452 GRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV 511
Query: 106 VLSNVH 111
+LSN++
Sbjct: 512 LLSNLY 517
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G + + VT VLTAC+ A L E GL + + E+ V MEHYGCVVDLL
Sbjct: 292 LFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLL 351
Query: 61 GRAGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA NE L + C+ HG + ++ ++ + L EL P+ YV
Sbjct: 352 GRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHGNLDMAEQMMQHLFELDPQGDANYV 411
Query: 106 VLSNVH 111
+LSN++
Sbjct: 412 LLSNIY 417
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+R ++VTF+AVL +C A L++ G++ F+S+ +++VP +EHYGC+VDLLGR G
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVG 466
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W AC++H V ++ EV L++L P Y +LSN
Sbjct: 467 RLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 110 VHT 112
++
Sbjct: 527 IYA 529
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E + + +TF AVL AC+ A +VELG LF + ++ + P +EHY C+VDLL
Sbjct: 387 LFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLL 446
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA ++F+W AC+ HG ++L+ + L EL+PE +
Sbjct: 447 GRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSL 506
Query: 106 VLSNVH 111
+LSN++
Sbjct: 507 LLSNLY 512
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G++ +++ F+ L AC LV+ G ELF+S++ + + P +EHYGC+VDLL
Sbjct: 313 LFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLL 372
Query: 61 GRAGLLSEANE-----------FLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLLSEA + +W A C+ H V+L+ V K +EL+P+ YV
Sbjct: 373 ARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYV 432
Query: 106 VLSNVHT 112
+L N+++
Sbjct: 433 LLGNIYS 439
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NEV F+ VLTAC+ LVE G FH + + +VP +EHYGC+VDLLGRA LL
Sbjct: 304 EDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLL 363
Query: 67 SEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F+ W AC+ G V L+ +R+ +L+P+ C +V+LSNV+
Sbjct: 364 AEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVY 423
Query: 112 T 112
Sbjct: 424 A 424
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G N+VT +A+LTAC+ +E GLE+F S+ +F V P +EHY C VD+LGRA
Sbjct: 422 EMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + +A E + S ACK H + L+ K+L E++PE+ Y++LS
Sbjct: 482 GKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLS 541
Query: 109 NVH 111
+++
Sbjct: 542 SIN 544
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + N VTFV VL+AC+ LV+ G+ F S+ +VP EHY CVVDLL
Sbjct: 715 LFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLL 774
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLLS A F L SAC +H + + LLEL+P+ YV
Sbjct: 775 GRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYV 834
Query: 106 VLSNVH 111
++SN++
Sbjct: 835 LVSNMY 840
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G + + +TFV+VLTAC+ + LV+ GLE+ S+ + + P ++HY C+VD LGRA
Sbjct: 596 EMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRA 655
Query: 64 GLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L S+C+++G V L+ V ++L+ L P++ YV+LS
Sbjct: 656 GRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLS 715
Query: 109 NVHT 112
N ++
Sbjct: 716 NTYS 719
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+R N TF AVL AC + LVE GL+ F+S+L ++++ P +EHY C+VD+LGRAG
Sbjct: 416 MKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAG 475
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E + W A CK+HG ++L+ V + L + YV++SN
Sbjct: 476 RLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSN 535
Query: 110 VH 111
++
Sbjct: 536 MY 537
>gi|225444407|ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Vitis vinifera]
Length = 470
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++ L+ N +TF++VL AC+ LVE GL+LF ++ E ++ P ++HYGC++D+LGR
Sbjct: 316 ERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGR 375
Query: 63 AGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
AG L EA N +W AC HG V++ V +++LE++ ++ YV+
Sbjct: 376 AGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVL 435
Query: 107 LSNV 110
LSN+
Sbjct: 436 LSNI 439
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GLR N +TF++VL AC+ A L++ G ++++ EF + +EHYGC+VDLLGRA
Sbjct: 393 EMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRA 452
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W SAC+IH V+L+ KRL EL + YV+LS
Sbjct: 453 GCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLS 512
Query: 109 NVH 111
N++
Sbjct: 513 NIY 515
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GLR N +TF++VL AC+ A L++ G ++++ EF + +EHYGC+VDLLGRA
Sbjct: 392 EMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRA 451
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W SAC+IH V+L+ KRL EL + YV+LS
Sbjct: 452 GCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLS 511
Query: 109 NVHT 112
N++
Sbjct: 512 NIYA 515
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 18/126 (14%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ +++TF+ VL+AC+ LVE G + F S+ +++ P +EHYGC++DLLGRA
Sbjct: 365 EMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRA 424
Query: 64 GLLSEANEF------------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G L EA E L SAC+ HG V++ V KRL+ ++ +
Sbjct: 425 GQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHT 484
Query: 106 VLSNVH 111
+L+N++
Sbjct: 485 LLANIY 490
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 18/126 (14%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ +++TF+ VL+AC+ LVE G + F S+ +++ P +EHYGC++DLLGRA
Sbjct: 456 EMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRA 515
Query: 64 GLLSEANEF------------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G L EA E L SAC+ HG V++ V KRL+ ++ +
Sbjct: 516 GQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHT 575
Query: 106 VLSNVH 111
+L+N++
Sbjct: 576 LLANIY 581
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM ++G++ N VTFVAVL+AC+ A VE GL F+S+ G F + P EHY CVV LL
Sbjct: 542 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLL 600
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA EF L SAC+I G V+L + + P+ Y+
Sbjct: 601 GRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYI 660
Query: 106 VLSNV 110
+LSN+
Sbjct: 661 LLSNI 665
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G+ +EVTF+ +L+AC A +V+ GL+LF + + + P+ EHY C+VDLL
Sbjct: 504 LFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLL 563
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA E +W AC+ HG ++L +L E +P YV
Sbjct: 564 GRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYV 623
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 624 LLSNIH 629
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++ NEVTFV +L AC+ A LV G ELF S+ ++ + P ++HY C++DLL
Sbjct: 326 LYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLL 385
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA L W SAC H +++ + R+L+L+PE Y+
Sbjct: 386 SRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYI 445
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 446 LLSNVY 451
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 21/128 (16%)
Query: 4 EMYE----KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E +G+ +EVTF +L+AC V+ GL LF S+ + + P EHY CV++L
Sbjct: 541 ELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 60 LGRAGLLSEANE----------------FLWSACKIHGAVKLSHEVGKRLLELQPEHCRR 103
LGR G L EA E LW AC+IH ++L+ +RLL L+P++
Sbjct: 601 LGRVGRLEEAVEIVQGMKTVSSAKIWGALLW-ACRIHHNLELAKYSAERLLALEPQNASN 659
Query: 104 YVVLSNVH 111
YV+LSN+H
Sbjct: 660 YVLLSNMH 667
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G+ NEVTFV VL AC+R +V+ GL +F S+ + + P ++HYGC+VDLL
Sbjct: 332 LFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLL 391
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA + L AC++HG V+L E+ L++ +H +V
Sbjct: 392 GRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHV 451
Query: 106 VLSNVH 111
+LSN++
Sbjct: 452 LLSNMY 457
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + + +TFVAVLTAC+ + LV+ G+++F+S+ E V P+++HY C++D L
Sbjct: 608 LYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSL 667
Query: 61 GRAGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L S+C+++ V L+ + L L P++ YV
Sbjct: 668 GRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYV 727
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 728 LLANIYS 734
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + + +TFVAVLTAC+ + LV+ G+++F+S+ E V P+++HY C++D L
Sbjct: 579 LYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSL 638
Query: 61 GRAGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E L S+C+++ V L+ + L L P++ YV
Sbjct: 639 GRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYV 698
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 699 LLANIYS 705
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++ NEVTFV +L AC+ A LV G ELF S+ ++ + P ++HY C++DLL
Sbjct: 326 LYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLL 385
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA L W SAC H +++ + R+L+L+PE Y+
Sbjct: 386 SRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYI 445
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 446 LLSNVY 451
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NEV F+ VLTAC+ LVE G FH + + +VP +EHYGC+VDLLGRA LL
Sbjct: 392 EDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLL 451
Query: 67 SEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F+ W AC+ G V L+ +R+ +L+P+ C +V+LSNV+
Sbjct: 452 AEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVY 511
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 18/126 (14%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + NE TFVAVLTAC A++V+ GL LF + + VVP MEHY CV+DLL RA
Sbjct: 333 QMAASRTKPNETTFVAVLTACTHAKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRA 392
Query: 64 GLLSEANEFL--------------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G++ EA +F+ W +AC+IH + + + V K+L+++ C +V
Sbjct: 393 GMVEEAEKFMEEKMGGLTAGDANVWGALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHV 452
Query: 106 VLSNVH 111
+ N++
Sbjct: 453 LTYNIY 458
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM K L + +TF+ V++AC A LV G F ++ ++ +VP MEHY C+VDL
Sbjct: 582 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLY 641
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG+L +A + L +AC++H V+L ++L+ LQP+ YV
Sbjct: 642 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYV 701
Query: 106 VLSNVH 111
+LSN++
Sbjct: 702 LLSNIY 707
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 15/117 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
+R NE+TF+ VL AC V+ GL F+++ + + P +EHYGC+VDLLGRA LL EA
Sbjct: 430 IRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEA 489
Query: 70 NEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+F +W AC+ HG ++L+ K++ EL+P C V+LSNV+
Sbjct: 490 EKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVY 546
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G R N VTF+ VL AC+ LV+ G + F+ ++ E++++P ++HYGC+VDLL R
Sbjct: 375 EMSVDGARPNRVTFIGVLIACSHKGLVDEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRC 434
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EAN LW AC++H V L+ E ++L +++P YV+LS
Sbjct: 435 GLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLS 494
Query: 109 NVH 111
N++
Sbjct: 495 NIY 497
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 21/128 (16%)
Query: 4 EMYE----KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E +G+ +EVTF +L+AC V+ GL LF S+ + + P EHY CV++L
Sbjct: 541 ELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 60 LGRAGLLSEANE----------------FLWSACKIHGAVKLSHEVGKRLLELQPEHCRR 103
LGR G L EA E LW AC+IH ++L+ +RLL L+P++
Sbjct: 601 LGRVGRLEEAVEIVQGMKTVSSAKIWGALLW-ACRIHHNLELAKYSAERLLALEPQNASN 659
Query: 104 YVVLSNVH 111
YV+LSN+H
Sbjct: 660 YVLLSNMH 667
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E G+ NE+TF+ VLT+C+ LVE G FH + + + P +EHYGC+VDLLGRA LL
Sbjct: 392 EGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLL 451
Query: 67 SEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F +W AC+ G V L+ V +R+ L+P C V+LS V+
Sbjct: 452 AEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVY 511
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E G+ NE+TF+ VLT+C+ LVE G FH + + + P +EHYGC+VDLLGRA LL
Sbjct: 391 EGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLL 450
Query: 67 SEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+EA +F +W AC+ G V L+ V +R+ L+P C V+LS V+
Sbjct: 451 AEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVY 510
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G R N VTF+ VL AC+ LV+ G F+ ++ E++++P ++HYGC+VDLL R
Sbjct: 481 EMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRC 540
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EAN LW AC++H V L+ E ++L +++P YV+LS
Sbjct: 541 GLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLS 600
Query: 109 NVH 111
N++
Sbjct: 601 NIY 603
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M K ++ + VTF+ VL+AC+RA VE G FHS+ + +VPI +HY C++DL
Sbjct: 461 LFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA EF L SAC++ G +++ + LLE+ P++ YV
Sbjct: 521 SRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYV 580
Query: 106 VLSNVH 111
+L ++H
Sbjct: 581 LLCSMH 586
>gi|413920230|gb|AFW60162.1| hypothetical protein ZEAMMB73_962137 [Zea mays]
Length = 516
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +G+ N VTF+AVL CA A V++G E+F S+L E +EHYGC+VDL
Sbjct: 355 LFQEMRRQGMEPNAVTFLAVLGCCAHAGAVDIGREIFRSMLSEHGTEAAIEHYGCMVDLF 414
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA N +W SAC+ H + L+ K L+ L+P + YV
Sbjct: 415 GRSGLLEEAHVLIQGMPMKPNAAIWGALLSACRAHAGLGLAEVALKELINLEPWNSGNYV 474
Query: 106 VLSNVH 111
+L+N++
Sbjct: 475 LLANLY 480
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 18/121 (14%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G N VTFVAVL+ACA A LVE G ++ + + ++P +EH+ C+VD+LGRAG L E
Sbjct: 305 GSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDE 364
Query: 69 ANEF--------------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A F LW+ ACK+H L E+ KRL+ L+PE+ +V+LSN+
Sbjct: 365 AYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNI 424
Query: 111 H 111
+
Sbjct: 425 Y 425
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M G+ NEVTFV +L AC+ A LV+ G + F S+ ++ + P+ EHY C+VDLL
Sbjct: 638 MYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G + A +F +WS ACKIH ++ ++L ++P + YV
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYV 757
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 758 MLSNIYS 764
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + N+VTFVA+L AC+ +LVE G F S+ + + P +EHYGC+VDLL
Sbjct: 339 LFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLL 398
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA E +++ AC+IH ++ +GK + EL +H +V
Sbjct: 399 GRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHV 458
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 459 LLANLYS 465
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M G+ NEVTFV +L AC+ A LV+ G + F S+ ++ + P+ EHY C+VDLL
Sbjct: 638 MYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G + A +F +WS ACKIH ++ ++L ++P + YV
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYV 757
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 758 MLSNIYS 764
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM E+G+R + ++FV VL AC+ A LV+ G + F ++ +E+ P +EHY C++DLL
Sbjct: 449 LFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLL 508
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA LW+ AC + + K+ +EL+P+H YV
Sbjct: 509 GRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYV 568
Query: 106 VLSNVH 111
L+NV+
Sbjct: 569 YLANVY 574
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G+ NEVT ++VL+AC+ A LV G LF ++ + P ++HYGC+VDLLGRA
Sbjct: 327 DMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRA 386
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E +W SAC +HG + L+ GK ++EL+P+ Y++L
Sbjct: 387 GLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLW 446
Query: 109 NVH 111
N++
Sbjct: 447 NIY 449
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+G++ + VTF+A+L AC+ LV+ G + F+ L + ++P + HYGC+VDLLGR
Sbjct: 591 EMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRV 650
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L E +F +WS AC+ H V+L+ + K+L+E+ P + +V+LS
Sbjct: 651 GHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLS 710
Query: 109 NVH 111
N++
Sbjct: 711 NIY 713
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G+ +E+T V++++ CA+ + +E+G L H + + ++ C+VD+
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRL-HLYIVDNKLWIRGSLLNCLVDMY 279
Query: 61 GRAGLLSEANEFL 73
+ G + EA+ L
Sbjct: 280 SKCGKMDEAHGLL 292
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M +G+ NEVTF+ +L+AC+R LVE GL +F S+ + + P+++HYGC+VDLL
Sbjct: 308 MFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLL 367
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG+L +A L +AC++HG V+L E + L E +H +V
Sbjct: 368 GRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 427
Query: 106 VLSNVH 111
+LSN++
Sbjct: 428 LLSNMY 433
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ VTF+ VL AC+ A LV+ G E+F+S++ + P ++HY CVVD+L
Sbjct: 508 IFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDIL 567
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F L AC+IH L+ V ++L EL P++ +V
Sbjct: 568 GRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 106 VLSNVHT 112
+LSN+H+
Sbjct: 628 LLSNIHS 634
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ + VTFV++L+AC+ A L+E G F S+ +F + P +EHYGC+VDLL
Sbjct: 736 LFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLL 795
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L E AN +W AC+IHG V ++ + L+L P++ YV
Sbjct: 796 GRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYV 855
Query: 106 VLSNVH 111
LS+++
Sbjct: 856 ALSHMY 861
>gi|302811424|ref|XP_002987401.1| hypothetical protein SELMODRAFT_126075 [Selaginella moellendorffii]
gi|300144807|gb|EFJ11488.1| hypothetical protein SELMODRAFT_126075 [Selaginella moellendorffii]
Length = 275
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G AN +TF++VL AC+ LV G + F S++G++ PI EH GC++DLLGRA
Sbjct: 152 EMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQPIEEHCGCMIDLLGRA 211
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LSEA L W +CK+HG ++L + ++LE PE+ +++LS
Sbjct: 212 GHLSEAKTLLARMPFKPNLIAWMSLLGSCKVHGNLELGRDAALKVLEFDPENAAAHMLLS 271
Query: 109 NVHT 112
+ T
Sbjct: 272 EIVT 275
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +GL+ ++ T VAVL+AC+ LV+ G + FH++ ++ V P +HY C+VDLLGR
Sbjct: 494 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGR 553
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA+ + W A ++HG +L+ ++ ++PE+ YV+L
Sbjct: 554 AGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 613
Query: 108 SNVH 111
SN++
Sbjct: 614 SNLY 617
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R + +TF+++L AC+ + LVE G LF + + + P +EHYGC+VDL GRA
Sbjct: 358 EMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRA 417
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
L +A EF +W AC IHG ++++ V RL E+ P++ +V+LS
Sbjct: 418 ARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLS 477
Query: 109 NVH 111
NV+
Sbjct: 478 NVY 480
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M +G+ NEVTF+ +L+AC+R LVE GL +F S+ + + P+++HYGC+VDLL
Sbjct: 333 MFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLL 392
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG+L +A L +AC++HG V+L E + L E +H +V
Sbjct: 393 GRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 452
Query: 106 VLSNVH 111
+LSN++
Sbjct: 453 LLSNMY 458
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G N VTFV VL+AC+ LV GL F S+ E +VP HY CVVDL+
Sbjct: 705 LFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLI 764
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG LS A +F L SAC +H V++ + LLEL+PE YV
Sbjct: 765 SRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYV 824
Query: 106 VLSNVH 111
+LSN++
Sbjct: 825 LLSNMY 830
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +E+TF+ +L+AC +++ G + F + F + P ++HY +VDLLGR
Sbjct: 386 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 445
Query: 63 AGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA++ + W A C++HG VKL + K+LLEL P YV+L
Sbjct: 446 AGLLEEADKLMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLL 505
Query: 108 SNVH 111
++
Sbjct: 506 DGMY 509
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G + +TF+A+L+ C+ A L + G LF + + + P +EHY C+VD+LGRA
Sbjct: 369 EMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRA 428
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA E +W ++C++HG V L+ V KRL EL+P + YV+LS
Sbjct: 429 GRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 488
Query: 109 NVH 111
N++
Sbjct: 489 NIY 491
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+++EK GLR + VTF++VLTAC+ + ++LG F+ + E+ + P+ EHYGC+VDL
Sbjct: 451 DLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDL 510
Query: 60 LGRAGLLSEA----NEFLW-----------SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAG LS+A NE W +ACK G + +R+LEL P +
Sbjct: 511 LCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTSETAF 570
Query: 105 VVLSNVHT 112
V L+N+++
Sbjct: 571 VTLANIYS 578
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + + +EVTF+ +L+AC LVE G + F + +F + P ++HY C+VDLLGRA
Sbjct: 403 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRA 462
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E + S AC+IHG V + +LL++ P YV+L+
Sbjct: 463 GLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLA 522
Query: 109 NVH 111
N++
Sbjct: 523 NMY 525
>gi|357514477|ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521549|gb|AET02003.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 15/119 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
+G ++VTFV +L AC +VE G +F S+ +F ++P +EHYGC+VDLLGRAG L+
Sbjct: 352 EGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLT 411
Query: 68 EANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA E L AC HG V+L+ + L L+P + YV+LSN++
Sbjct: 412 EAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIY 470
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 15/118 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G + +TF+ +L AC LVE G F S+ ++ +VP +EHYGC+VDLLGRAGLL+
Sbjct: 342 GENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAH 401
Query: 69 ANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
A +F +W+ AC+++ V+L+ ++L+E +P++ YV+LSN++
Sbjct: 402 AVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIY 459
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G ++VTFV VL AC +V G F S+ +F + P +EHYGC+VDLLGRA
Sbjct: 307 KMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRA 366
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA++ + W AC HG V+L+ + L EL+P + YV+LS
Sbjct: 367 GELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILS 426
Query: 109 NVHT 112
N++
Sbjct: 427 NIYA 430
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++EK G++ + VTFV +L+AC+ LV+ G E F + EF + P++EHY C+VD+
Sbjct: 508 ELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDI 567
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAG L+EA EF LW ACK H +L G++L+EL Y
Sbjct: 568 LSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAY 627
Query: 105 VVLSNVHT 112
V+LS+++T
Sbjct: 628 VLLSSIYT 635
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M+ M +G++ NEVTF++V AC+ + +V GL++F+++ ++ V P +HY CVVDLL
Sbjct: 601 MLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLL 660
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG + EA + + WS AC+IH +++ + L++L+P Y
Sbjct: 661 GRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHY 720
Query: 105 VVLSNVHT 112
V+L+N+++
Sbjct: 721 VLLANIYS 728
>gi|195614306|gb|ACG28983.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
M +G+ N T V L+AC+ L++ LF S+ +F +VP ++HYGC+VDLLGRA
Sbjct: 317 RMQREGVPPNATTLVGALSACSHPGLLDEARRLFRSMENDFGIVPGIQHYGCMVDLLGRA 376
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLLSEA + +W +ACK HG ++++ +L+L P + YVVLS
Sbjct: 377 GLLSEAEDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLDPSNHGVYVVLS 436
Query: 109 NVHT 112
N++
Sbjct: 437 NLYA 440
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ N +TF+AVLTAC+ A LV+ G + F S+ + +VP +EH+ + D LGRAG L EA
Sbjct: 369 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAY 428
Query: 71 EFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
F+ WS AC++H L+ EV K+++EL+P +VVLSN+++
Sbjct: 429 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYS 485
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 73/121 (60%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
E ++ + VT +AVL+ C+ L + GL +F+ + G+ EV P MEHYGCVVDLLGR+G
Sbjct: 561 ETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGR 620
Query: 66 LSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA EF +W AC++H V + G++LLE++P + YV+LSN+
Sbjct: 621 VEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNL 680
Query: 111 H 111
+
Sbjct: 681 Y 681
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +R +E+T V VL+AC+ A L++ GL F+S++ + + P+ EHY C+VDLLGRA
Sbjct: 541 EMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRA 600
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E L AC++H +++ ++L EL+P YV+LS
Sbjct: 601 GRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLS 660
Query: 109 NV 110
N+
Sbjct: 661 NI 662
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM ++G++ ++VTF+ VL AC+ + LV GL+ F S+ EF +VP ++HYGCV DLL
Sbjct: 331 LFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMR-EFGLVPGIKHYGCVADLL 389
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L A EF LW SAC G L +V +R+LEL H YV
Sbjct: 390 ARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYV 449
Query: 106 VLSNV 110
+ SN+
Sbjct: 450 IFSNL 454
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KGL+ VT ++VL+ACA +ELG H + + ++ +++ ++D+ G+
Sbjct: 233 EMQAKGLKLTSVTLISVLSACALLGALELG-RWIHEYVRKVQLDSLVKVNTALIDMYGKC 291
Query: 64 GLLSEA 69
G L +A
Sbjct: 292 GSLEDA 297
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E GL+ + + F+ VL AC+ LVE G +F S+ E+ + P +EHYGC+VDLLGRA
Sbjct: 287 DMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRA 346
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G++ EA +F +W AC H + L+ + +R+ EL P H YV+LS
Sbjct: 347 GMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLS 406
Query: 109 NVH 111
N +
Sbjct: 407 NAY 409
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M G R N VTF+ V+ ACA +LV+ G F+ L+ +F +VP +EHY C+V LL
Sbjct: 413 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 472
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA F+ S AC +H ++ + LL+L+P Y+
Sbjct: 473 SRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYI 532
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 533 LLSNMH 538
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM K L + +TF+ V++AC A LV G F ++ ++ +VP MEHY C+VDL
Sbjct: 486 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLY 545
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG+L +A + L +AC++H V+L ++L+ LQP+ YV
Sbjct: 546 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYV 605
Query: 106 VLSNVH 111
+LSN++
Sbjct: 606 LLSNIY 611
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G++ + FV+VL+AC+ A L GL+ F + ++ + P EHY C+VDLL
Sbjct: 302 LFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLL 361
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA E LW ACKIH V+L+ ++++EL+P + YV
Sbjct: 362 GRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYV 421
Query: 106 VLSNVHT 112
+LSNV+T
Sbjct: 422 LLSNVYT 428
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM ++G++ N VTFVAVL+AC+ A VE GL F+S+ G F + P EHY CVV LL
Sbjct: 621 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLL 679
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA EF L SAC+I G V+L + + P+ Y+
Sbjct: 680 GRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYI 739
Query: 106 VLSNV 110
+LSN+
Sbjct: 740 LLSNI 744
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++G++ + +TFV +L+AC+ + LV+ G F + ++ + P ++HYGC+VD+
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F L SAC++HG V L + L E++PEH +V
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 106 VLSNVH 111
+LSN++
Sbjct: 659 LLSNMY 664
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
M +G R NEVTF+ VL ACA RLV+ GL+ F + + P M+HYGCVV +L RA
Sbjct: 734 SMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRA 793
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A F+ W ACK HG V ++ K+L EL P + Y++LS
Sbjct: 794 GQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLS 853
Query: 109 NVHT 112
N++
Sbjct: 854 NIYA 857
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R N +TF++V+ AC+ LVE GL F S++ E+ + P ++H+GC++D+LGRA
Sbjct: 164 EMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRA 223
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W C +G V++ K + +L+ E + VLS
Sbjct: 224 GRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLS 283
Query: 109 NV 110
NV
Sbjct: 284 NV 285
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+R +++ F+ VL AC A LV+ G ELF S++ ++ + P +EHYGC+VDLL R
Sbjct: 300 QMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARN 359
Query: 64 GLLSEANE-----------FLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E +W A C+ H V+ + V K + L+P+ YV+LS
Sbjct: 360 GFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLS 419
Query: 109 NVHT 112
N++
Sbjct: 420 NIYA 423
>gi|302787443|ref|XP_002975491.1| hypothetical protein SELMODRAFT_103939 [Selaginella moellendorffii]
gi|300156492|gb|EFJ23120.1| hypothetical protein SELMODRAFT_103939 [Selaginella moellendorffii]
Length = 375
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ +G A+ TF + L AC+ L++ LE+F S++G+++ VP +HYGCV+DLLGR
Sbjct: 249 ELSLEGFAADNFTFTSTLFACSHGGLLKESLEVFASMMGDYQAVPSPQHYGCVLDLLGRM 308
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + W AC H + + L+ELQPE YVV S
Sbjct: 309 GKLGEAKELIGGMPLEPDSVAWMSLLGACSTHSDATKAFGLADSLVELQPEKAAHYVVFS 368
Query: 109 NVHT 112
NV T
Sbjct: 369 NVAT 372
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + +++T+VAVLTAC+ + LV+ GLE+F+++L ++ VVP + HY C++D L
Sbjct: 605 LYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCL 664
Query: 61 GRAGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG +E E + S+C+IH + L+ + L L P++ YV
Sbjct: 665 SRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYV 724
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 725 LLANMYS 731
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M E G R N +T + VL AC+ A LVE G F S+ F V P EHYGC++DLL
Sbjct: 339 LFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLL 398
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + W AC++H V L+ K+++EL+PE Y+
Sbjct: 399 GRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYI 458
Query: 106 VLSNVH 111
+LSN++
Sbjct: 459 LLSNIY 464
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + NEVTF+AVL+ACA LVE G LF S+ G F + P +HY C+VDL GR G
Sbjct: 398 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 457
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA + W A C +H +L R+++LQP H RY +L+N
Sbjct: 458 LLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLAN 517
Query: 110 VHT 112
+++
Sbjct: 518 LYS 520
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ ++VT V VLTACA A ++ G F+ + + + P MEHYGC+VDL GRAG
Sbjct: 325 MEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAG 384
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L+ A KIHG V L +G R++EL P++ RYV+L+N
Sbjct: 385 RLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLAN 444
Query: 110 V 110
+
Sbjct: 445 L 445
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E+ ++ ++V FVA+LTAC+ V+ G +LF S+ + P + HYGC+VDLL
Sbjct: 552 LFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLL 611
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC+ H V+L+H ++L +L PE +V
Sbjct: 612 GRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHV 671
Query: 106 VLSNVH 111
+LSN++
Sbjct: 672 LLSNIY 677
>gi|334186610|ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|223635634|sp|O23491.2|PP315_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g16470
gi|332658358|gb|AEE83758.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 501
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G R N VTF+ VLTAC LV+ G E F+S+ ++ + P +HY +VD LGR
Sbjct: 299 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA EF L AC+IHG VKL + LEL P + YVV
Sbjct: 359 AGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVF 418
Query: 108 SN 109
+N
Sbjct: 419 AN 420
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G++ + TFV +L AC A LVE G F+S+ F + P +EHYGC+VDLLGRA
Sbjct: 401 QMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRA 460
Query: 64 GLLS-----------EANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN +W A C++H +L V K+L+ L+P H YV+LS
Sbjct: 461 GCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLS 520
Query: 109 NVHT 112
N++
Sbjct: 521 NIYA 524
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ +EV F+A+LTAC+ + V+ GL F S+ ++ + P M+HY +VDLLGRA
Sbjct: 309 KMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRA 368
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F+ S AC+ H ++++ ++LL+L+P+H YV LS
Sbjct: 369 GRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLS 428
Query: 109 NVH 111
NV+
Sbjct: 429 NVY 431
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G R ++VT VAVL AC A V+ G+ F+++ ++ +VP +EHYGC+VDLLGR G
Sbjct: 232 MRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGG 291
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W AC++H AV L+ EV L +L+P Y +LSN
Sbjct: 292 RLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSN 351
Query: 110 V 110
+
Sbjct: 352 I 352
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M ++G+ + VTFV++L AC+ A LV+ G F+ + + + PI +HY C+VD+
Sbjct: 462 LFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMF 521
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A +F +W AC+IHG V++ + L EL P++ YV
Sbjct: 522 GRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYV 581
Query: 106 VLSNVHT 112
++SN++
Sbjct: 582 LMSNMYA 588
>gi|2245003|emb|CAB10423.1| hypothetical protein [Arabidopsis thaliana]
gi|7268397|emb|CAB78689.1| hypothetical protein [Arabidopsis thaliana]
Length = 459
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G R N VTF+ VLTAC LV+ G E F+S+ ++ + P +HY +VD LGR
Sbjct: 257 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 316
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA EF +W AC+IHG VKL + LEL P + YVV
Sbjct: 317 AGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVF 376
Query: 108 SN 109
+N
Sbjct: 377 AN 378
>gi|413936368|gb|AFW70919.1| hypothetical protein ZEAMMB73_351733, partial [Zea mays]
Length = 346
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G + + +TFV V+ AC LV+ G LF+S+ GEF + P +EHYGC+VDLLGRAGLL E
Sbjct: 159 GAKPDVITFVVVILACTHGSLVDEGKLLFNSMRGEFGLKPRIEHYGCMVDLLGRAGLLKE 218
Query: 69 ANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A+ +W+ AC HG ++L+ ++L+ L+P + V+LSN++
Sbjct: 219 ADSLTASMPMEPDAVIWAALLGACSFHGNLELAETAVEKLMHLEPHNTANLVILSNIYA 277
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ +EV F+A+LTAC+ + V+ GL F S+ ++ + P M+HY +VDLLGRA
Sbjct: 396 KMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRA 455
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F+ S AC+ H ++++ ++LL+L+P+H YV LS
Sbjct: 456 GRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLS 515
Query: 109 NVH 111
NV+
Sbjct: 516 NVY 518
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++G +EVTF+ VL+AC+ L+E G + F+SL + + P +EHY C+VD+LGR
Sbjct: 723 EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782
Query: 63 AGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG E F +W ACK+HG ++ +L EL+PE Y++L
Sbjct: 783 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842
Query: 108 SNV 110
SN+
Sbjct: 843 SNM 845
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+ ++VT V VLTACA A ++ G F+ + + + P MEHYGC+VDL GRAG
Sbjct: 325 MEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAG 384
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L+ A KIHG V L +G R++EL P++ RYV+L+N
Sbjct: 385 RLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLAN 444
Query: 110 V 110
+
Sbjct: 445 L 445
>gi|357447289|ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482968|gb|AES64171.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 801
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G R NE+TF+A+LTAC+ LV G+E F ++ E P +EHYGC++DLL
Sbjct: 400 LFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLL 459
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG+L EA E L SAC++HG VKL V L H +
Sbjct: 460 GRAGMLHEAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKDVLSNFYTPHPTDSL 519
Query: 106 VLSNVH 111
++S +
Sbjct: 520 LISGTY 525
>gi|326490838|dbj|BAJ90086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+M +G +EV F++++ AC +RLV G +LF S++ E+ + P MEHYG +VDLL R
Sbjct: 298 SQMLRQGFWPDEVIFLSMINACCHSRLVSEGRQLFKSMVEEYHITPWMEHYGSMVDLLCR 357
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+ +L EA EF +W AC+ HG + L+ +V L++++P+H YV+
Sbjct: 358 SDMLDEAFEFVLAMPVKPDPAIWRVLTGACRDHGNISLATKVMDHLIDMEPDHEGNYVLA 417
Query: 108 SNVH 111
SN++
Sbjct: 418 SNLY 421
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M +G+ ++VTFV ++ AC LV G +LF S+ F +VP +EHYGC+VDLL
Sbjct: 232 LYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLL 291
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + +W AC H V+ + + L +++P + YV
Sbjct: 292 GRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYV 351
Query: 106 VLSNVH 111
+L N++
Sbjct: 352 ILCNIY 357
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M N VTF +VL+AC+ + LVE G ++F ++ E+++ P ++HYGC+VDL
Sbjct: 296 LFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLF 355
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG++ A++F LW ACK HG L + +++L+L P YV
Sbjct: 356 CRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYV 415
Query: 106 VLSNVH 111
++SNV+
Sbjct: 416 LVSNVY 421
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ +TF++VL AC+ A LV+ G +FH+++ +F P+ EHY C+VD+LGRA
Sbjct: 324 DMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRA 383
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A EF+ W AC IH L+H ++L EL PE+ YV++S
Sbjct: 384 GQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMS 443
Query: 109 NVHT 112
N+++
Sbjct: 444 NIYS 447
>gi|357117625|ref|XP_003560564.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Brachypodium distachyon]
Length = 435
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G R N+VTF+AVL+ACA LV+ GL F S+ ++ + P EHY VVD+L
Sbjct: 225 LFDQMTRDGFRPNDVTFLAVLSACAHGGLVDEGLRHFSSMPLDYGLTPKSEHYAAVVDML 284
Query: 61 GRAGLLSEANEF------------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
R G L +A E +W AC+ HG V+L +R LQP + +Y
Sbjct: 285 ARVGRLHDAYELVKNLPDCQEHSVVWGALLGACRKHGDVRLVELAARRFFRLQPGNAGKY 344
Query: 105 VVLSNVH 111
VVL+N +
Sbjct: 345 VVLANTY 351
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G + VTF++VL AC+ A LV G E+FH+++ ++ + P++EHY C+VD+L
Sbjct: 499 LYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDIL 558
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L +A EF+ W AC IH ++ +RL EL P YV
Sbjct: 559 GRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYV 618
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 619 LLSNIYS 625
>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ +M + N VTF + L+AC+ + LV+ G+ELFH++ +F P MEH+ CVVDLL
Sbjct: 677 LLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLL 736
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RA L +A F +WS AC+ V ++ ++L +L+PEH YV
Sbjct: 737 ARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYV 796
Query: 106 VLSNVH 111
LSN++
Sbjct: 797 TLSNIY 802
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M ++ N++TF+A+L+AC+ LV+ G F+ ++ + + P +EHYGC++DLL
Sbjct: 303 MFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLL 362
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W +AC HG +L + LLEL+P++ Y
Sbjct: 363 GRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYA 422
Query: 106 VLSNVH 111
+LSN++
Sbjct: 423 LLSNIY 428
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + GLR + VTFV++L+AC+ LV+ GL F S+ +F V +EH C++DLLGRA
Sbjct: 653 EMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRA 712
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA F+ W +ACKIHG ++L+ + RL EL YV+ S
Sbjct: 713 GKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYS 772
Query: 109 NV 110
NV
Sbjct: 773 NV 774
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + ++A+ +TFV++L+AC+ + LV+ G + F + E+ + P ++HYGC+VDLL
Sbjct: 514 LFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLL 573
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A E L SACKI+G +L RLLE+ E+ YV
Sbjct: 574 GRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYV 633
Query: 106 VLSNVH 111
+LSN++
Sbjct: 634 LLSNIY 639
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM G + + VTF VL AC+ LV G +F S+ E+ + P+ EHYGC+VDLL
Sbjct: 274 MFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLL 333
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA N +W AC H ++L+ +V +++ EL H YV
Sbjct: 334 GRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYV 393
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 394 LLSNVY 399
>gi|414877902|tpg|DAA55033.1| TPA: hypothetical protein ZEAMMB73_057713 [Zea mays]
Length = 377
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 15/119 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
+G++ + +TF+ V+ +C LV+ G LF+S+ GEF + P +EHYGC+VDLLGRAGLL
Sbjct: 118 EGVKPDGITFIGVILSCTHGGLVDEGKLLFNSMRGEFGLKPRIEHYGCMVDLLGRAGLLK 177
Query: 68 EANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA+ + S AC HG ++L+ ++L+ L+P + V+LSN++
Sbjct: 178 EADSLIASMPMEPDAVIWGALLGACSFHGNLELAKTAVEKLMHLEPHNTANLVILSNIY 236
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G++ + VT VAVL+AC+ ++LV G LF + ++ + P ++H+ C+VDL
Sbjct: 471 LFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLY 530
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A + + W+ AC IHG ++ ++LLE++PE+ YV
Sbjct: 531 GRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPENPGYYV 590
Query: 106 VLSNVH 111
+++N++
Sbjct: 591 LIANMY 596
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ ++ TF VL+AC+ + +V+ G+ FH + EF V P + HYGC+VDLLGR
Sbjct: 297 EEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGR 356
Query: 63 AGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL +A + + S AC+IHG V L V L+EL+ + YV+L
Sbjct: 357 AGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLL 416
Query: 108 SNVHT 112
N+++
Sbjct: 417 LNIYS 421
>gi|297800494|ref|XP_002868131.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313967|gb|EFH44390.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 484
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G R N VTF+ VLTAC LV+ G E F+S+ ++ + P +HY +VD LGR
Sbjct: 282 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFNSMKRDYGIEPEGQHYAAMVDTLGR 341
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA EF +W AC+IHG VKL + LEL P + YVV
Sbjct: 342 AGRLQEAYEFVMKSPCKEHAPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVF 401
Query: 108 SN 109
+N
Sbjct: 402 AN 403
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M EM G + + VTF VL AC+ LV G +F S+ E+ + P+ EHYGC+VDLL
Sbjct: 274 MFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLL 333
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA N +W AC H ++L+ +V +++ EL H YV
Sbjct: 334 GRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYV 393
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 394 LLSNVY 399
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + G++ NE+TF ++L AC+ A LV+ GL LF +L + ++ +HY CV+DLL
Sbjct: 516 LFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLL 575
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E + W A C IH V+L K L EL+P + YV
Sbjct: 576 GRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYV 635
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 636 LLANIYS 642
>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
Length = 740
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TFV+VLTAC+ + LVE GLE+ S+ + P ++HY C+VD LGRA
Sbjct: 576 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 635
Query: 64 GLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L S+C++HG V L+ V ++L+ L P+ YV+LS
Sbjct: 636 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 695
Query: 109 NVHT 112
N ++
Sbjct: 696 NTYS 699
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + ++A+ +TFV++L+AC+ + LV+ G + F + E+ + P ++HYGC+VDLL
Sbjct: 514 LFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLL 573
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A E L SACKI+G +L RLLE+ E+ YV
Sbjct: 574 GRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYV 633
Query: 106 VLSNVH 111
+LSN++
Sbjct: 634 LLSNIY 639
>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TFV+VLTAC+ + LVE GLE+ S+ + P ++HY C+VD LGRA
Sbjct: 610 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 64 GLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L S+C++HG V L+ V ++L+ L P+ YV+LS
Sbjct: 670 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 109 NVHT 112
N ++
Sbjct: 730 NTYS 733
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TF+ +L AC LVE G F S+ ++ ++P +EHYGC+VD+L RA
Sbjct: 485 QMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 544
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A F +W+ AC+I+ V+L+ +RL+EL+P++ YV+LS
Sbjct: 545 GRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLS 604
Query: 109 NVH 111
N++
Sbjct: 605 NIY 607
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ +E+TFV +L AC+ + + G + + ++P +HY CV+D+LGRA
Sbjct: 459 MCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRAD 518
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W S+C++HG L+ GKRL EL+PEHC YV++SN
Sbjct: 519 KLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSN 578
Query: 110 VH 111
V+
Sbjct: 579 VY 580
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ ++VTF+ +LTAC + LVE G E F + + P EHY C+V+LLGRAGL+SEA
Sbjct: 413 KPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAG 472
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E L SACK+H KL+ ++L+ ++P + Y++LSN++
Sbjct: 473 ELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 528
>gi|413920848|gb|AFW60780.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
M +G+ N T V L+AC+ L++ LF S+ +F +VP ++HYGC+VDLLGRA
Sbjct: 317 RMQREGVPPNATTLVGALSACSHPGLLDEARRLFRSMEKDFGIVPGIQHYGCMVDLLGRA 376
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLLSEA + +W +ACK HG ++++ +L+L P + YVVLS
Sbjct: 377 GLLSEAEDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLNPSNHGVYVVLS 436
Query: 109 NVHT 112
N++
Sbjct: 437 NLYA 440
>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
Length = 719
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +G AN +TF++VL AC+ LV G + F S++G++ PI EH GC++DLLGRA
Sbjct: 596 EMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQPIEEHCGCMIDLLGRA 655
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LSEA N W +CK+HG ++L + ++LE PE+ +++LS
Sbjct: 656 GHLSEAKMLLARMPFKPNLIAWMSLLGSCKVHGNLELGRDAALKVLEFDPENAAAHMLLS 715
Query: 109 NVHT 112
+ T
Sbjct: 716 EIVT 719
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ NE TF++VL+AC+ A LV+ G E F S+ ++ + P MEHYG +VDLL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ ACK+H V+L+ E +++ EL P+ +V
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570
Query: 106 VLSNVH 111
+L+N++
Sbjct: 571 LLANIY 576
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ NE TF++VL+AC+ A LV+ G E F S+ ++ + P MEHYG +VDLL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ ACK+H V+L+ E +++ EL P+ +V
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570
Query: 106 VLSNVH 111
+L+N++
Sbjct: 571 LLANIY 576
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E ++ ++VT V VL+ACA A L++ G F S+ F +VP +EHYGC+VDLLGR
Sbjct: 415 KMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRM 474
Query: 64 GLLS-----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EANE +W SAC++H V+L +RLL L P V+LS
Sbjct: 475 GCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLS 534
Query: 109 NVH 111
N++
Sbjct: 535 NMY 537
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M L+ N +TF+AVLTAC+ A LV+ G + F+S+ + +VP +EH+ + D L
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTL 421
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA F+ WS ACK+H L+ EV K++ +L+P ++
Sbjct: 422 GRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHI 481
Query: 106 VLSNVHT 112
+LSN ++
Sbjct: 482 ILSNTYS 488
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G++ + VTFV +L+ C+ + L+ G F +LG + + P +EHYGC+VDLLGRAG
Sbjct: 297 MEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAG 356
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+IH KL +V ++LLEL P YV LSN
Sbjct: 357 YLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSN 416
Query: 110 VH 111
++
Sbjct: 417 LY 418
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 15/117 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
+R NE+TF+ VL AC V+ GL F+++ + + P +EHYGC+VDLLGRA LL EA
Sbjct: 242 IRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEA 301
Query: 70 NEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+F +W AC+ HG ++L+ K++ EL+P C V+LSNV+
Sbjct: 302 EKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVY 358
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++ R + +T V+VL+AC+ L+E G F S+ EF + EHYGCVVDLL RAG
Sbjct: 797 MQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAG 856
Query: 65 LLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A E LW SACK+ G K + VG+R++EL P YVVLS+
Sbjct: 857 RLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSS 916
Query: 110 V 110
V
Sbjct: 917 V 917
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G++ + +TFV VL+AC V+ G F L + +VP M HY C+VDLL
Sbjct: 518 LFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLL 577
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL SEA EF+ W SAC++H L+ ++LL + P + Y
Sbjct: 578 ARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYS 637
Query: 106 VLSNVHT 112
LSNV++
Sbjct: 638 ALSNVYS 644
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E G++ +E+T++ VL +C A LV S+L VVP +EHY C++DL
Sbjct: 607 LFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLF 666
Query: 61 GRAGLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR GLL +A + L S C IHG V L K+L+ELQPE+ YV
Sbjct: 667 GRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYV 726
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 727 LLSNLYA 733
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ + FV VL+AC+ A L + GLE F + +++ P EHY C+VDLL
Sbjct: 341 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLL 400
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + S ACKIH V+L+ +R++EL+PE+ YV
Sbjct: 401 GRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYV 460
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 461 LLSNIYS 467
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 15/118 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G++ NEVTFV VL AC LVE G F + ++++ P +EH+GC++DLLGRAG E
Sbjct: 383 GVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEE 442
Query: 69 A-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
A +E +W +ACKIHG L+ K+L+E+ P++ ++L+N++
Sbjct: 443 AMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIY 500
>gi|449435742|ref|XP_004135653.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Cucumis sativus]
gi|449522917|ref|XP_004168472.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Cucumis sativus]
Length = 318
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 24/135 (17%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++D M G++ N VTF ++L+AC L+E GL LF + +F VVP M+HYGC+VDLL
Sbjct: 141 LLDAMGAHGVKPNAVTFTSLLSACCHGGLIEEGLHLFRVMERKFGVVPQMQHYGCIVDLL 200
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQ------PE 99
GR+G L EA + LW S+C +HG V++ VGK L+E Q E
Sbjct: 201 GRSGHLREAYKLILEMPMEPDGVLWRSLLSSCMLHGDVEMGERVGKLLVERQGGESFDDE 260
Query: 100 HC---RRYVVLSNVH 111
C +V LSNV+
Sbjct: 261 WCVGSEDFVALSNVY 275
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ +++ F+ VL+AC+ A LV GL F SL+ ++ ++P +EHY C++DLLGR
Sbjct: 387 EEMLADGVWPDQIVFLEVLSACSHAGLVNEGLHYF-SLMKDYHILPGLEHYTCLIDLLGR 445
Query: 63 AGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA L S ACKIHG VKL+ ++L E++P Y ++
Sbjct: 446 AGLLDEAFNILNSMSIGYSSDTLGAFIGACKIHGDVKLAKWAAEKLFEMEPNKPVNYTLM 505
Query: 108 SNV 110
S+V
Sbjct: 506 SSV 508
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+GL +++ +V VL AC+ A LV+ GL+ F+ + E + P ++HYGC+VDL+GRA
Sbjct: 281 EMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRA 340
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA N+ LW SA K+H ++ K+L +L + YVVLS
Sbjct: 341 GKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLS 400
Query: 109 NVH 111
N++
Sbjct: 401 NMY 403
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+GL +++ +V VL AC+ A LV+ GL+ F+ + E + P ++HYGC+VDL+GRA
Sbjct: 324 EMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRA 383
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA N+ LW SA K+H ++ K+L +L + YVVLS
Sbjct: 384 GKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLS 443
Query: 109 NVH 111
N++
Sbjct: 444 NMY 446
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM ++ + +TFVA+L+AC+ A LV G LF ++ EF + P +EHY C+VDLLGR
Sbjct: 500 NEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGR 559
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA NE++W A C+++ + + E ++L L+ + +++L
Sbjct: 560 AGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLL 619
Query: 108 SNVHT 112
SN++
Sbjct: 620 SNIYA 624
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 18/121 (14%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G N VTFVAVL+ACA A LVE G ++ + + ++P +EH+ C+VD+LGRAG L E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 69 ANEF--------------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A +F LW+ ACK+H L E+ KRL+ L+P++ +V+LSN+
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Query: 111 H 111
+
Sbjct: 425 Y 425
>gi|15238469|ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g59600
gi|10177776|dbj|BAB11040.1| unnamed protein product [Arabidopsis thaliana]
gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis thaliana]
gi|332009827|gb|AED97210.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G + + +TF A+LTAC+ A L +LG LF + ++ +VP +EHY C+VDLL
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435
Query: 61 GRAGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E F+W +AC+ HG ++L+ K L EL+PE+ +
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGL 495
Query: 106 VLSNVH 111
+L++++
Sbjct: 496 LLTSLY 501
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ + FV VL+AC+ A L + GLE F + +++ P EHY C+VDLL
Sbjct: 332 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLL 391
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + S ACKIH V+L+ +R++EL+PE+ YV
Sbjct: 392 GRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYV 451
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 452 LLSNIYS 458
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M KGL + TFV + AC+ LVE GLE+F S+ V P +EHYGC++DLLGRA
Sbjct: 459 KMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRA 518
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E+ LW A +IHG + + +L+EL+PE YV+LS
Sbjct: 519 GRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLS 578
Query: 109 NVH 111
N++
Sbjct: 579 NMY 581
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 18/129 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + E TFVAVLTAC ARLV GL+LF + + V P EHY C+VDL+
Sbjct: 606 LFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYGVEPQXEHYACLVDLM 665
Query: 61 GRAGLLSEANEFL--------------W----SACKIHGAVKLSHEVGKRLLELQPEHCR 102
RAG+L+EA +F+ W AC+ +G +++ + V K+L ++ C
Sbjct: 666 ARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRTYGNIEVGNRVWKKLADMGVADCG 725
Query: 103 RYVVLSNVH 111
+V+ N++
Sbjct: 726 THVLSYNLY 734
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + GL+ N +TF+ VL AC+ A L+ G ++++ EF + P +EHYGC+VDLLGRA
Sbjct: 387 DMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRA 446
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + LW SAC+I+ V+L+ +RL EL + YV+LS
Sbjct: 447 GCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLS 506
Query: 109 NVH 111
N++
Sbjct: 507 NIY 509
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G++ NEVTFV ++ AC+ A LV+ G +LF S+ E+ + P ++HY C +DLL
Sbjct: 324 LYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLL 383
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G LSEA +E W SACK H ++ V LLEL+P+ Y+
Sbjct: 384 SRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYI 443
Query: 106 VLSNVHT 112
+LSNV+
Sbjct: 444 LLSNVYA 450
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M KG R + TF+ VL AC A LV GL+ + + V P +EHY CVVD+LGRAG
Sbjct: 695 MQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAG 754
Query: 65 LLSEA----NEF-------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA NE +W S+C+ +G +++ EV K+LLEL+P YV+LSN
Sbjct: 755 QLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSN 814
Query: 110 VHT 112
++
Sbjct: 815 LYA 817
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M GL+ +F+ +L AC A LV+ GLE F S+ + + P M+HYGCVVDLL
Sbjct: 478 LFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLL 537
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L A EF LW SACK+H + L+ +LLEL P + YV
Sbjct: 538 SRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYV 597
Query: 106 VLSNVH 111
+LSN +
Sbjct: 598 LLSNTY 603
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G+ + TF AVL+AC+ LV+ G+ F + EF + P + HYGC+VDLLGRA
Sbjct: 321 EMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRA 380
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G+L +A E + S AC+IHG L + + L+EL+ + YV+L
Sbjct: 381 GMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLL 440
Query: 109 NVHT 112
N+++
Sbjct: 441 NIYS 444
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +KG NE TF+AVL AC V+ G +F S+ ++ + P EHYGC+ DLLGRAG
Sbjct: 306 MLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQ-DYGIKPQREHYGCLADLLGRAG 364
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ EA L W S+C++H + + VGKRL+EL+P RYVVL N
Sbjct: 365 NVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFN 424
Query: 110 VHT 112
++
Sbjct: 425 LYA 427
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ +++TF +L+ C+ + LV++GL+ F+ + + + P +EHY CV DLLGRA
Sbjct: 398 EMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRA 457
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA++ L +AC+ H ++++ ++L L+PE+ YV+LS
Sbjct: 458 GRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 517
Query: 109 NVH 111
N++
Sbjct: 518 NMY 520
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + ++AN+VTFV++L+ C LV GL LF+S++ + + P MEHY C+V LL
Sbjct: 539 LFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLL 598
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F+ W S+C +H V L +++L+++P YV
Sbjct: 599 GRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYV 658
Query: 106 VLSNVH 111
+LSN++
Sbjct: 659 LLSNMY 664
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G+ +E++FV++L AC+ + LV+ G F+ + E ++ P +EHY C+VD+L
Sbjct: 587 LFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G LS+A F +W A C+IH VKL+ V +++ EL+PE+ YV
Sbjct: 647 ARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYV 706
Query: 106 VLSNVH 111
+++N++
Sbjct: 707 LMANIY 712
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E+G+ + T AVL CAR RL++ G + H + E ++ + ++D+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRV-HEWIKENDMGFDIFVSNALMDMY 442
Query: 61 GRAGLLSEANEFLWSACKIHGAVKLSHEVG 90
+ G + EA E ++S ++ + + +G
Sbjct: 443 AKCGSMREA-ELVFSEMRVKDIISWNTVIG 471
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E GL+ N +TF+AVL AC A +E G E F+ + +++ P ++HY C+ DLLGR
Sbjct: 450 QMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRK 509
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF L SACKIH V + V L EL+P+ YV ++
Sbjct: 510 GRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMA 569
Query: 109 NVH 111
N++
Sbjct: 570 NIY 572
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ +++TF +L+ C+ + LV++GL+ F+ + + + P +EHY CV DLLGRA
Sbjct: 361 EMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRA 420
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA++ L +AC+ H ++++ ++L L+PE+ YV+LS
Sbjct: 421 GRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 480
Query: 109 NVH 111
N++
Sbjct: 481 NMY 483
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G++ + VTFV++L+AC+ + VE G F L+ E+ + P ++HYGC+VDLLGRA
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRA 669
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A +F L AC+IHG ++L RL E+ ++ YV+LS
Sbjct: 670 GYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLS 729
Query: 109 NVH 111
N++
Sbjct: 730 NIY 732
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +++ GL+ + VTF+ VLTAC+ A +V+LG F + E+++ P EHYGC++DLL
Sbjct: 548 LFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLL 607
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG LSEA ++ +WS +C++HG V ++LL L P ++
Sbjct: 608 CRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHI 667
Query: 106 VLSNVH 111
L+N++
Sbjct: 668 ALANIY 673
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E ++ NEVTF+A+L+AC+ LVELG + F S+ + + P +EHYGC++DLLGRAG L
Sbjct: 339 EDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHL 398
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA E L +A G +L+ E + L L+P HC Y +LSN +
Sbjct: 399 QEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTY 458
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G++ + VTFV +L+ C+ + L+ G F +LG + + P +EHYGC+VDLLGRAG
Sbjct: 225 MEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAG 284
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+IH KL +V ++LLEL P YV LSN
Sbjct: 285 YLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSN 344
Query: 110 VH 111
++
Sbjct: 345 LY 346
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
DEM ++ + + VTF+ V+TAC A LVE G + F+S++ + + P M+HY C++DL R
Sbjct: 585 DEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSR 644
Query: 63 AGLLSEA----NEF-----------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG+L +A NE L A ++H V+L ++L+ LQPE YV+L
Sbjct: 645 AGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLL 704
Query: 108 SNVH 111
SN++
Sbjct: 705 SNMY 708
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM KG+R N+ TFV VL+ CA A LVE G LF S+ + ++ P +EH+GC+VDLL
Sbjct: 302 LFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLL 361
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G + EA N LW SA + G VK + K L+EL+P + YV
Sbjct: 362 ARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYV 421
Query: 106 VLSNVHT 112
+LSNV+
Sbjct: 422 LLSNVYA 428
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G + + VT VLTAC+ A L E GL + + E+ + MEHYGCVVDLL
Sbjct: 292 LFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLL 351
Query: 61 GRAGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA NE L + C++HG + ++ ++ + L EL P YV
Sbjct: 352 GRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYV 411
Query: 106 VLSNVH 111
+LSN++
Sbjct: 412 LLSNIY 417
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + G++ NE+TF ++L AC+ A LV+ GL LF +L + ++ +HY CV+DLL
Sbjct: 516 LFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLL 575
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E + W A C IH V+L K L EL+P + YV
Sbjct: 576 GRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYV 635
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 636 LLANIYS 642
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +GL+ NE+TF+ VL AC LV G + F S+ VVP MEHYGC+VDLL
Sbjct: 301 LFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLL 360
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA E + S AC+IH V+++ E +L L P YV
Sbjct: 361 GRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYV 420
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 421 LLSNIYA 427
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + ++ NEVT +AVL+AC+ LVELG +F S+ ++ + P +EHYGC++DLLGRAG
Sbjct: 355 MEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAG 414
Query: 65 LL-----------SEANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L SEAN +W SA +G L+ E + L L+P +C Y +LSN
Sbjct: 415 YLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNYSLLSN 474
Query: 110 VH 111
+
Sbjct: 475 TY 476
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M ++G +EVTF+ VL+AC+ L+E G + F+SL + + P +EHY C+VD+LGR
Sbjct: 482 EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 541
Query: 63 AGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG E F +W ACK+HG ++ +L EL+PE Y++L
Sbjct: 542 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 601
Query: 108 SNV 110
SN+
Sbjct: 602 SNM 604
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E ++ + V+FV+VL+AC A LVE G ++FHS+ ++ + P +EHY C+VDLLGRAG
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L E F+ W A C++H VKL L++L+P + +VVLS+
Sbjct: 785 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSS 844
Query: 110 VH 111
++
Sbjct: 845 IY 846
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 18/125 (14%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M GL+ +++TFVAVL+AC+ A LVE G +LFHS+ + + P +EHYGC +DLLGRAG
Sbjct: 433 MQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAG 492
Query: 65 LLSEANEF------------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
LL EA E L SAC+ +G + + + L +++ + +
Sbjct: 493 LLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTL 552
Query: 107 LSNVH 111
L++++
Sbjct: 553 LASIY 557
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NE T V+ L+ACA R +ELG E+ + E ++ IM + ++D+ + G +
Sbjct: 203 ESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASELDLTTIMGN--ALLDMYCKCGHV 260
Query: 67 SEANEFL 73
S A E
Sbjct: 261 SVAREIF 267
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 18/129 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G + E TFVAVLTAC ARLV+ GL+LF + + V P +EHY C+VDL+
Sbjct: 334 LFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLM 393
Query: 61 GRAGLLSEANEFL--------------W----SACKIHGAVKLSHEVGKRLLELQPEHCR 102
RAG+L+EA +F+ W AC+ +G +++ + V K+L ++ C
Sbjct: 394 ARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYGNIEVGNRVWKKLADMGVADCG 453
Query: 103 RYVVLSNVH 111
+V+ N++
Sbjct: 454 THVLSYNLY 462
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G + N ++VAVLTAC+ A LV+ G F S+ ++ + P MEHY C+VDLLGRA
Sbjct: 816 KMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRA 875
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA F+ W AC +G ++++ K L+L+P+ YV+LS
Sbjct: 876 GLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 935
Query: 109 NVH 111
N++
Sbjct: 936 NIY 938
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + LR VTFV VL AC+ LV+ G E+FHS+ ++ V P +EHYGC+VDLLGR G
Sbjct: 370 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 429
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L SACK+H ++L +V K L + YV+LS+
Sbjct: 430 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSH 489
Query: 110 VH 111
V+
Sbjct: 490 VY 491
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + +R NE T V VL+AC++ +E+G HS + +FE+ + ++++ R G
Sbjct: 269 MQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCG 327
Query: 65 LLSEAN 70
+ EA
Sbjct: 328 SIDEAQ 333
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V +M + G++ N+ TF+ +L +C LV G + FH++ + + P +EHYGC+VDL
Sbjct: 231 LVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLF 290
Query: 61 GRAGLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL E AN +W A CKIH L+ K+L+ L+P + YV
Sbjct: 291 SRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYV 350
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 351 MLSNIYS 357
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + + +E+TF+ VLTAC+ A V G ++F ++G++ + ++H C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA++F LWS AC+IHG +RL+EL+P++ YV
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYV 940
Query: 106 VLSNVH 111
+LSN++
Sbjct: 941 LLSNIY 946
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G ++ TF ++L+ CA + +E+G + FHS++ + ++ + +VD+ +
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKC 476
Query: 64 GLLSEANEFLWSACK 78
G L +A + C
Sbjct: 477 GALEDARQIFEHMCD 491
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ ++VTF+ +LTAC + LVE G E F + + P EHY C+V+LLGRAGL+SEA
Sbjct: 528 KPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAG 587
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E L SACK+H KL+ ++L+ ++P + Y++LSN++
Sbjct: 588 ELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 643
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM KG+R N+ TFV VL+ CA A LVE G LF S+ + ++ P +EH+GC+VDLL
Sbjct: 328 LFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLL 387
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G + EA N LW SA + G VK + K L+EL+P + YV
Sbjct: 388 ARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYV 447
Query: 106 VLSNVHT 112
+LSNV+
Sbjct: 448 LLSNVYA 454
>gi|357130868|ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Brachypodium distachyon]
Length = 433
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 17/127 (13%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSL-LGEFEVVPIMEHYGCVVDLLG 61
DEM +G+ N VT +AVL+ACA LV+ G+ L + GE +V P +EHYGC+VDLLG
Sbjct: 279 DEMKSEGVPPNRVTMLAVLSACAHRGLVDTGMGLLKQMEDGEIKVAPTVEHYGCLVDLLG 338
Query: 62 RAGLLS------------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G + EAN +W AC+ HG V + +RL E +P + YV
Sbjct: 339 RVGWVDDARALVEHRMPMEANVVIWGTLLGACEKHGNVSVGEWAAERLQEAEPWNDGVYV 398
Query: 106 VLSNVHT 112
VLSNV+
Sbjct: 399 VLSNVYA 405
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM + G+R + +TF A+L+ C + LV G + F S+ ++ + P +EHY C+VDLL
Sbjct: 627 LFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLL 686
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G+AG L EA +F +W +AC++H +K++ + LL L+P + Y
Sbjct: 687 GKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYA 746
Query: 106 VLSNVHT 112
++ N+++
Sbjct: 747 LMMNIYS 753
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + + VTFV++L+AC LV+ GL + S+ EF V P +EH C++DLLGR+
Sbjct: 1443 EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 1502
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LS A N+ W +AC+IHG ++L+ + + LLEL P YV+ S
Sbjct: 1503 GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 1562
Query: 109 NV 110
NV
Sbjct: 1563 NV 1564
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M KG + N+VTF+++L AC+ L G E F++++ ++ + P EHY C+VDL
Sbjct: 422 LYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLF 481
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL EA N LW A I+G + L E L +QPE+ YV
Sbjct: 482 ARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYV 541
Query: 106 VLSNVHT 112
VL+++++
Sbjct: 542 VLASIYS 548
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M G+ ++VTFVA+L+ C+ A L++ GL L+HS+L ++ + P EHY C+VDL R
Sbjct: 552 DLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSR 611
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA F L +AC++H + ++ VGKR+ E P +++L
Sbjct: 612 CGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILL 671
Query: 108 SNVHT 112
SN++
Sbjct: 672 SNIYA 676
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TF+ +L AC LVE G F S+ ++ ++P +EHYGC+VD+L RA
Sbjct: 422 QMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 481
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A F +W+ AC+I+ V+L+ +RL+EL+P++ YV+LS
Sbjct: 482 GRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLS 541
Query: 109 NVH 111
N++
Sbjct: 542 NIY 544
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M G+ ++VTFVA+L+ C+ A L++ GL L+HS+L ++ + P EHY C+VDL R
Sbjct: 547 DLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSR 606
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA F L +AC++H + ++ VGKR+ E P +++L
Sbjct: 607 CGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILL 666
Query: 108 SNVHT 112
SN++
Sbjct: 667 SNIYA 671
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G++ + VTFV++L+AC+ + VE G F L+ E+ + P ++HYGC+VDLLGRA
Sbjct: 378 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRA 436
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A +F L AC+IHG ++L RL E+ ++ YV+LS
Sbjct: 437 GYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLS 496
Query: 109 NVH 111
N++
Sbjct: 497 NIY 499
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M ++G N+ TF+ VL+ACA + ++ G F + +++ P +EHYGC+VDLL
Sbjct: 441 MFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLL 500
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ + E LW SAC+ H +L+ V KRL+EL+P Y+
Sbjct: 501 GRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYL 560
Query: 106 VLSNVH 111
+LSN++
Sbjct: 561 LLSNIY 566
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G R + VTFV +L+AC LV GL F S++ ++ +VP +EHYGC+VDLL
Sbjct: 415 LFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLL 474
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ +A + +W+ AC+++ V+++ +RL+EL+P + +V
Sbjct: 475 GRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFV 534
Query: 106 VLSNVH 111
++SN++
Sbjct: 535 MVSNIY 540
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +KG NE TF+AVL AC V+ G +F S+ ++ + P EHYGC+ DLLGRAG
Sbjct: 306 MLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQ-DYGIKPQREHYGCLADLLGRAG 364
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ EA L W S+C++H + + VGKRL+EL+P RYVVL N
Sbjct: 365 NVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFN 424
Query: 110 VHT 112
++
Sbjct: 425 LYA 427
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM E +R ++ FV+VL+AC+ A L + GLE F + ++ + P EHY CVVDLL
Sbjct: 350 LFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLL 409
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + S ACKIH +++ + ++EL+P + YV
Sbjct: 410 GRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYV 469
Query: 106 VLSNVHT 112
+LSN++T
Sbjct: 470 LLSNIYT 476
>gi|253761503|ref|XP_002489130.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
gi|241947229|gb|EES20374.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
Length = 489
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G+ N T V L+AC+ L++ LF S+ +F + P ++HYGC+VDLLGRA
Sbjct: 317 QMQQEGVPPNATTLVGALSACSHPGLLDEARRLFSSMEKDFGITPAIQHYGCMVDLLGRA 376
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLLSEA + +W +ACK H ++++ +L+L P + YVVLS
Sbjct: 377 GLLSEAEDLIRGMSCEADTVIWGALLTACKNHSGIEIAERAAVEMLKLDPSNHGVYVVLS 436
Query: 109 NVH 111
N++
Sbjct: 437 NLY 439
>gi|15221226|ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74400
gi|12324820|gb|AAG52382.1|AC011765_34 hypothetical protein; 20273-21661 [Arabidopsis thaliana]
gi|332197466|gb|AEE35587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D+ + + N+VTF+ VL AC+ + LVE G F S++ ++ + P H+GC+VDL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 62 RAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
R+G L +A+EF L AC +HG V+L EV +R+ EL +H YV
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 107 LSNVH 111
LSN++
Sbjct: 384 LSNIY 388
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
Query: 8 KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS 67
+G ++VTFV VL AC +V G F S+ +F + P +EHYGC+VDLLGRAG L
Sbjct: 766 EGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELR 825
Query: 68 EANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA++ + W AC HG V+L+ + L EL+P + YV+LSN++
Sbjct: 826 EAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIY 884
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + LR VTFV VL AC+ LV+ G E+FHS+ ++ V P +EHYGC+VDLLGR G
Sbjct: 334 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 393
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA + L SACK+H ++L +V K L + YV+LS+
Sbjct: 394 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSH 453
Query: 110 VH 111
V+
Sbjct: 454 VY 455
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + +R NE T V VL+AC++ +E+G HS + +FE+ + ++++ R G
Sbjct: 233 MQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCG 291
Query: 65 LLSEAN 70
+ EA
Sbjct: 292 SIDEAQ 297
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + ++VTF+A+L+AC+ A LV+ G F+ ++ E+ P +EHY C++DLL
Sbjct: 497 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 556
Query: 61 GRAGLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GR G L EA E L+SAC +H + L ++G+ L+E P+ Y
Sbjct: 557 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 616
Query: 105 VVLSNVH 111
++LSN++
Sbjct: 617 IILSNMY 623
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ VTF+ VL AC+ A LV+ G E+F+S++ + P ++HY C+VD+LGRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A +F L AC+IH L+ V ++L EL P++ +V+LS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 109 NVHT 112
N+H+
Sbjct: 631 NIHS 634
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N VTF+ VL AC+ LVE GL+ F + + +VP MEHY C+VDLL R G
Sbjct: 569 MVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG 628
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L++A NE +W AC++HG V+L +++L + E+ YV+LSN
Sbjct: 629 HLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSN 688
Query: 110 VH 111
+
Sbjct: 689 TY 690
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G+ + +TFVA+L+ C+ L E GL LF + EF V P +EHY C+VD+LGRAG
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ EA + L ++C++HG V + K L L+P + YV++SN
Sbjct: 489 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 548
Query: 110 VH 111
++
Sbjct: 549 IY 550
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G + VT + VL+AC LVE G F ++ ++ + P +EHYGC+VDLLGR
Sbjct: 490 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRG 549
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA NE +W SAC++H V+ + L LQP + Y VLS
Sbjct: 550 GLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLS 609
Query: 109 NVH 111
N++
Sbjct: 610 NIY 612
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ ++VTF+ +LTAC + LVE G E F + + P EHY C+V+LLGRAGL+SEA
Sbjct: 512 KPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAG 571
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E L SACK+H KL+ ++L+ ++P + Y++LSN++
Sbjct: 572 ELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 627
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 16/122 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N+VTFV +LTAC + LVE G +LFH + ++ + P +HY CVVDLLGRAG
Sbjct: 467 MRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAG 525
Query: 65 LLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L A F +W SACKIH V L +RL L P + YV LSN
Sbjct: 526 HLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSN 585
Query: 110 VH 111
++
Sbjct: 586 LY 587
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N VTF+ VL AC+ LVE GL+ F + + +VP MEHY C+VDLL R G
Sbjct: 569 MVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG 628
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L++A NE +W AC++HG V+L +++L + E+ YV+LSN
Sbjct: 629 HLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSN 688
Query: 110 VH 111
+
Sbjct: 689 TY 690
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G+R NE+TFV VL+AC+ A L E F + E+++ PI++HYGC+VD+
Sbjct: 481 LFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMF 540
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A NE +WS+ C+ HG ++L+ RL+EL+P+ YV
Sbjct: 541 VRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYV 600
Query: 106 VLSNVH 111
+L N++
Sbjct: 601 LLLNMY 606
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +EV+F+++L AC+ + L++ G F+ + E V P +EHY C+VDLL R
Sbjct: 289 NEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLAR 348
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L+ A +F +W S C+IH VKL+ +V + + EL+PE+ YV+L
Sbjct: 349 SGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLL 408
Query: 108 SNVH 111
+N +
Sbjct: 409 ANTY 412
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TF+ VL +C LVE G F+S++ E+ + P +EHYGC+VDL GRA
Sbjct: 451 QMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRA 510
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL A EF +W+ AC+I+ + L+ ++L+ L+P++ YV+LS
Sbjct: 511 GLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLS 570
Query: 109 NVH 111
N++
Sbjct: 571 NIY 573
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M ++ R N VTFV VL+AC+RA VE G F LL +VP ME YGC+VDLL
Sbjct: 553 LFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLL 612
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +WS AC+I+G + ++ +R L +P YV
Sbjct: 613 GRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYV 672
Query: 106 VLSNVHT 112
LS+++
Sbjct: 673 QLSHMYA 679
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+ + +TF++VL+ACA VE G F+ + +F + P EHY C++DLLGRAG
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LSEA + W+ AC+ HG ++L+ + ++L+L+P + YVVLSN
Sbjct: 496 KLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555
Query: 110 VH 111
++
Sbjct: 556 MY 557
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+ + +TF++VL+ACA VE G F+ + +F + P EHY C++DLLGRAG
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LSEA + W+ AC+ HG ++L+ + ++L+L+P + YVVLSN
Sbjct: 496 KLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555
Query: 110 VH 111
++
Sbjct: 556 MY 557
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G+ + +TFVA+L+ C+ L E GL LF + EF V P +EHY C+VD+LGRAG
Sbjct: 436 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 495
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ EA + L ++C++HG V + K L L+P + YV++SN
Sbjct: 496 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 555
Query: 110 VH 111
++
Sbjct: 556 IY 557
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TF+ VL +C LVE G F+S++ E+ + P +EHYGC+VDL GRA
Sbjct: 409 QMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRA 468
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL A EF +W+ AC+I+ + L+ ++L+ L+P++ YV+LS
Sbjct: 469 GLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLS 528
Query: 109 NVH 111
N++
Sbjct: 529 NIY 531
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
++ N+VTFV++L+AC+ A L+E G+++FH ++ E++++P EHYG +VDLLGR G L +A
Sbjct: 507 VKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKA 566
Query: 70 ----NEF-----------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
NE L AC+IH +K+ L L P H Y +LSN++
Sbjct: 567 LDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIY 623
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS- 67
G++ + TF+ +L C A LV+ G F+S+ F + P +EHYGC+VDLLGRAGLL
Sbjct: 410 GIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDE 469
Query: 68 ----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
EAN +W AC+IH +L+ K+L+EL+P + YV+LSN+++
Sbjct: 470 AHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 528
>gi|51038170|gb|AAT93973.1| unknown protein [Oryza sativa Japonica Group]
Length = 207
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G + +VTF+++L AC+ + GLE+ +S+ ++ V+P MEHY CVVD+L
Sbjct: 28 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 87
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F LW AC HG ++ ++LL L P YV
Sbjct: 88 GRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYV 147
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 148 LLSNIYS 154
>gi|357446911|ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482779|gb|AES63982.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 18/120 (15%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + N VTF++ LTACA A LVE G E+F S+ E+++ P MEHY C+VDLLGRAG L
Sbjct: 370 EYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWL 429
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCR--RYVVLSN 109
++A EF L S+C+IHG ++++ L +L + R YV LSN
Sbjct: 430 NQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLNA-YGRPGAYVALSN 488
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 16/118 (13%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ NEVTF+ V AC+ + L+ GL LF+ + + V P +HY CVVDLLGRAG L EA
Sbjct: 621 KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 680
Query: 71 EFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
E + WS AC+IH V+L K LL L+P YV+LSN+++
Sbjct: 681 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 738
>gi|242071929|ref|XP_002451241.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
gi|241937084|gb|EES10229.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
Length = 505
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G+ N VTF+AVL CA A V++G E+F S++ E + P +EHYGC+VDL
Sbjct: 338 LFQKMMRHGVEPNAVTFLAVLGCCAHAGAVDIGREIFQSMVSEHGIEPAIEHYGCMVDLF 397
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR GLL EA N +W SAC+ H + + K L+ L+P + YV
Sbjct: 398 GRCGLLEEAHALIQGMPMKPNAAIWGALLSACRAHAGLGTAEVALKELINLEPWNSGNYV 457
Query: 106 VLSNVH 111
+L+N++
Sbjct: 458 LLANLY 463
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++ +G VTF+ VLTAC+RA LV G F + + + P MEHYGC+VDLL
Sbjct: 354 LFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLL 413
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG + +A E LW+ +C++HG ++L E+G +L+++ P H YV
Sbjct: 414 SRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYV 473
Query: 106 VLSNV 110
L+ +
Sbjct: 474 QLARI 478
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G + +VTF+++L AC+ + GLE+ +S+ ++ V+P MEHY CVVD+L
Sbjct: 412 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F LW AC HG ++ ++LL L P YV
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYV 531
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 532 LLSNIYS 538
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
EKGL+ +++TF+ VL+AC A L+E G +LF+SL F+++P +EHY C+VDLL RAG L
Sbjct: 415 EKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHL 474
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA +F L +AC+ ++ V R+++L+P + YVV S ++
Sbjct: 475 EEAWDFIEEMPGKVDAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVVSSKIY 534
Query: 112 T 112
Sbjct: 535 A 535
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G+ A+E++FV++L AC+ + LV+ G F+ + E ++ P +EHY C+VD+L
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A F +W A C+IH VKL+ +V +++ EL+PE+ YV
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 706
Query: 106 VLSNVHT 112
+++N++
Sbjct: 707 LMANIYA 713
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G R N +TFVAVL+ACA + L++ G +F S+ + +VP +EH C+VD+
Sbjct: 378 LFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMF 437
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAGLL++A +F+ W+ AC++H L +V + +L ++PE+ Y
Sbjct: 438 GRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHY 497
Query: 105 VVLSNVH 111
V+LSN++
Sbjct: 498 VMLSNIY 504
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G+R +EVTFV +L AC LVE G F ++ E+ + P +EHYGC++DLLGRAG E
Sbjct: 335 GVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDE 394
Query: 69 A-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
A +E +W + CK+HG L+ K+L+E+ P + ++L+NV+
Sbjct: 395 AMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVY 452
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +GL +E+TFV VL AC+ +++ G E F + E ++P +EHYGC+VDLL
Sbjct: 307 LFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLL 366
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL+ +A E+ +W AC IHG + L LL L+P+H YV
Sbjct: 367 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYV 426
Query: 106 VLSNVH 111
+LSN++
Sbjct: 427 LLSNLY 432
>gi|296083841|emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + ++VTF+A+L+AC+ A LV+ G F+ ++ E+ P +EHY C++DLL
Sbjct: 350 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 409
Query: 61 GRAGLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GR G L EA E L+SAC +H + L ++G+ L+E P+ Y
Sbjct: 410 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 469
Query: 105 VVLSNVH 111
++LSN++
Sbjct: 470 IILSNMY 476
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++G++ N TF AV TAC + LVE G + F S++ ++ ++P +EH C+VDLL
Sbjct: 376 LFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLL 435
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ W A C+IH ++L+ V ++L L P+ YV
Sbjct: 436 GRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYV 495
Query: 106 VLSNVH 111
++SN++
Sbjct: 496 LMSNIY 501
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ N +TF+ VL+AC A LVE G +F + + V P ++HYGC+VDLLGRA
Sbjct: 758 DMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRA 817
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L +AC+ HG V + + L L P H V+LS
Sbjct: 818 GLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLS 877
Query: 109 NVH 111
N++
Sbjct: 878 NIY 880
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+ + +TF++VL+ACA VE G F+ + +F + P EHY C++DLLGRAG
Sbjct: 408 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 467
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LSEA + W+ AC+ HG ++L+ + ++L+L+P + YVVLSN
Sbjct: 468 KLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 527
Query: 110 VH 111
++
Sbjct: 528 MY 529
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 16/118 (13%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ NEVTF+ V AC+ + L+ GL LF+ + + V P +HY CVVDLLGRAG L EA
Sbjct: 421 KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 480
Query: 71 EFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
E + WS AC+IH V+L K LL L+P YV+LSN+++
Sbjct: 481 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 538
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + ++VTF+A+L+AC+ A LV+ G F+ ++ E+ P +EHY C++DLL
Sbjct: 689 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 748
Query: 61 GRAGLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GR G L EA E L+SAC +H + L ++G+ L+E P+ Y
Sbjct: 749 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 808
Query: 105 VVLSNVH 111
++LSN++
Sbjct: 809 IILSNMY 815
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M + G NE+TF+ VL AC LV G F+S++ E ++ ++HYGC+VDLL
Sbjct: 491 MFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLL 550
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA E + W AC+ H ++ +G++L++LQP+H +V
Sbjct: 551 GRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHV 610
Query: 106 VLSNVH 111
+LSN++
Sbjct: 611 LLSNIY 616
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +EVTFV VL AC+ A V+ G FH + ++++ P + H GCVVD+LGRA
Sbjct: 362 EMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRA 421
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W ACK+HG V+L+ ++LL ++ + YV+LS
Sbjct: 422 GLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLS 481
Query: 109 NVH 111
NV+
Sbjct: 482 NVY 484
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ N VTFV VLTAC+ LVE GL+L+ ++ E + P EH CVVDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L+EA F L SACK G V L+ + + +L++ P + +V
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 106 VLSNVH 111
+L ++H
Sbjct: 681 LLCSMH 686
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M ++G++ N TF AV TAC + LVE G + F S++ ++ ++P +EH C+VDLL
Sbjct: 418 LFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLL 477
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ W A C+IH ++L+ V ++L L P+ YV
Sbjct: 478 GRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYV 537
Query: 106 VLSNVH 111
++SN++
Sbjct: 538 LMSNIY 543
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G+ A+E++FV++L AC+ + LV+ G F+ + E ++ P +EHY C+VD+L
Sbjct: 436 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 495
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A F +W A C+IH VKL+ +V +++ EL+PE+ YV
Sbjct: 496 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 555
Query: 106 VLSNVHT 112
+++N++
Sbjct: 556 LMANIYA 562
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+++EK G +TFV VL AC+R LV+ G F + ++++ MEHYGC+VDL
Sbjct: 352 QLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDL 411
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAGL+ EA E LW SACK HG V L VG +L+EL P H Y
Sbjct: 412 LSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYY 471
Query: 105 VVLSNVHT 112
V+L++++
Sbjct: 472 VLLASIYA 479
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLG-EFEVVPIMEHYGCVVDL 59
+ +EM G+R NEVTF+A+LTAC LV G + F+ + G ++ + P +EHYGC+VDL
Sbjct: 321 LFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDL 380
Query: 60 LGRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RA LL EA E L SACK +G +L E+ R +EL Y
Sbjct: 381 LCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVY 440
Query: 105 VVLSNVHT 112
V+LSN+H
Sbjct: 441 VLLSNIHA 448
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + +R N+VTF+ +L+AC+ A LVE G +LF + F V P +HY C+VDLL
Sbjct: 365 LFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 424
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W AC+IHG ++ L +L+P Y+
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 484
Query: 106 VLSNVH 111
+LSN++
Sbjct: 485 LLSNIY 490
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E G +EVTFVA+L AC+RA +V G ELFH + +F +VP ++HY C+VDLL
Sbjct: 587 LFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLL 646
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L+EA + W A C+IH V+L K +LEL+P +V
Sbjct: 647 SRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHV 706
Query: 106 VLSNVHT 112
+L +++T
Sbjct: 707 LLCDLYT 713
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M G R N VTF+ V+ ACA +LV+ G F+ L+ +F +VP +EHY C+V LL
Sbjct: 106 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 165
Query: 61 GRAGLLSEANEFL------W---------SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA F+ W +AC +H ++ + LL+L+P Y+
Sbjct: 166 SRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYI 225
Query: 106 VLSNVHT 112
+LSN+H
Sbjct: 226 LLSNMHA 232
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
GL+ +++TF+ +L++C+ + LV G F ++ +F +VP MEH C+VD+LGRAGL+ E
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 69 ANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A+ F L SAC+IH ++L EV K++ L PE +V+LSN+++
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 627
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
GL+ +++TF+ +L++C+ + LV G F ++ +F +VP MEH C+VD+LGRAGL+ E
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 69 ANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A+ F L SAC+IH ++L EV K++ L PE +V+LSN+++
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 627
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + ++ + V F+A+L+AC A LV+ G F+ ++ + ++P +EHY C++DLLGRA
Sbjct: 500 EMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRA 559
Query: 64 GLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA E L+SAC++H + L E+ + L++ P+ Y++L
Sbjct: 560 GRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILL 619
Query: 108 SNVH 111
SN++
Sbjct: 620 SNMY 623
>gi|356546500|ref|XP_003541664.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g26900, mitochondrial-like [Glycine max]
Length = 470
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++G R NEVTF+A+LTAC+ LV G E+F ++ E+ P ++HYGC++DLL
Sbjct: 326 LFNRMEKEGFRPNEVTFLAILTACSHGGLVVEGTEMFKHMVQEYRFSPQVKHYGCLIDLL 385
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG+L EA++ L SAC+I+G VKL V L + E+ +
Sbjct: 386 GRAGMLLEAHKLIDSLPIKGDKTAWQXLLSACRIYGDVKLGKCVKDVLKSIYTENATDSL 445
Query: 106 VLSNVH 111
++S ++
Sbjct: 446 LISGIY 451
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G++ NE++FV VL+AC+ LV G F+ + + +VP + HY C++DLL
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F L AC+IHG +L+ + + LL ++ + YV
Sbjct: 290 GRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYV 349
Query: 106 VLSNVH 111
+LSN++
Sbjct: 350 LLSNIY 355
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M E G +EVTFVA+L AC+RA +V G ELFH + +F +VP ++HY C+VDLL
Sbjct: 587 LFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLL 646
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L+EA + W A C+IH V+L K +LEL+P +V
Sbjct: 647 SRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHV 706
Query: 106 VLSNVHT 112
+L +++T
Sbjct: 707 LLCDLYT 713
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G++ +E+TF+ +L+ACA LV+ +F L G+ + P EHY C+VD++ RA
Sbjct: 235 EMQIAGIKPDEITFLCLLSACAHGGLVKQASYVFEGL-GKNGMTPKTEHYACMVDVMARA 293
Query: 64 GLLSEANEFL---------------WSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G ++EA +FL S C HG + L+ +GK+L+EL PEH RYV LS
Sbjct: 294 GQVAEAYQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLS 353
Query: 109 NVHT 112
NV+
Sbjct: 354 NVYA 357
>gi|357131531|ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + +R + +TFV VLTAC+ A LV++GL+ + +++ ++ + +HY CVVD+LGR
Sbjct: 366 ERMRAQAVRPDPITFVGVLTACSHAGLVDMGLDYWEAMVQDYGMDRRADHYACVVDMLGR 425
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG + EA + L SACK H V+++ V +L EL+P + Y++L
Sbjct: 426 AGRIVEAFDMVQTMPMGPHPGALGALLSACKTHDNVEIAEIVANKLFELEPRNTGNYILL 485
Query: 108 SNVHT 112
SN++
Sbjct: 486 SNIYA 490
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G+R NEVTF+ VLTAC RA LV E+F S+ + P +EHYGC+VD+LGRA
Sbjct: 322 QMQAEGVRPNEVTFICVLTACGRAGLVGRAKEVFRSMAAVHGMEPGVEHYGCLVDVLGRA 381
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL+EA E L +AC HG V+ +V + L EL +H +V LS
Sbjct: 382 GLLAEAMETVRSMTMRPDAYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQLS 441
Query: 109 NVHT 112
N++
Sbjct: 442 NMYA 445
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G R + VT + VL+AC VE G + F ++ ++ +VP +EHYGC++DLLGR
Sbjct: 439 QMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRG 498
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA NE +W SAC++H V+ + L +LQP + Y VLS
Sbjct: 499 GLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLS 558
Query: 109 NVH 111
N++
Sbjct: 559 NIY 561
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + +R N+VTF+ +L+AC+ A LVE G +LF + F V P +HY C+VDLL
Sbjct: 365 LFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 424
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA N +W AC+IHG ++ L +L+P Y+
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 484
Query: 106 VLSNVH 111
+LSN++
Sbjct: 485 LLSNIY 490
>gi|297603826|ref|NP_001054643.2| Os05g0147600 [Oryza sativa Japonica Group]
gi|255676018|dbj|BAF16557.2| Os05g0147600, partial [Oryza sativa Japonica Group]
Length = 221
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G + +VTF+++L AC+ + GLE+ +S+ ++ V+P MEHY CVVD+L
Sbjct: 42 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 101
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F LW AC HG ++ ++LL L P YV
Sbjct: 102 GRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYV 161
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 162 LLSNIYS 168
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G+R + V VA+ +AC+ A L + G F ++ +++ P +EHY C+VDLL
Sbjct: 354 LFERMVSEGIRPDNVAMVALFSACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLL 413
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E + S ACKIH V + E R++EL+P++ YV
Sbjct: 414 GRAGRLEEARELISSMPMPADGAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYV 473
Query: 106 VLSNVHT 112
++SN++T
Sbjct: 474 LMSNIYT 480
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+R N TF AVL AC + LV GL+ F+S+L ++++ P +EHY C+VD+LGRAG
Sbjct: 417 MKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAG 476
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E + W A CK+H ++L+ V K L + YV++SN
Sbjct: 477 RLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSN 536
Query: 110 VH 111
++
Sbjct: 537 MY 538
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E GL+ N +TF+AVL AC A +E G E F+ + +++ P ++HY C+ DLLGR
Sbjct: 450 QMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRK 509
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF L SACKIH V + V L EL+P+ YV ++
Sbjct: 510 GRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMA 569
Query: 109 NVH 111
N++
Sbjct: 570 NIY 572
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M GL+ + VTF+ VL+AC+RA LVE G + F S+ + +VPI +HY C++DL
Sbjct: 467 LFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLY 526
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G EA EF+ W S+C++ G +++ + LLE P++ YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 106 VLSNVH 111
+L ++H
Sbjct: 587 LLCSMH 592
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M GL+ + +TF+ VL+AC+ V G F S+ F V P EHY C+VDLL
Sbjct: 475 LFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLL 534
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL EA E L AC+ HG V+++ G++LLEL PE Y
Sbjct: 535 SRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYS 594
Query: 106 VLSNV 110
+L+N+
Sbjct: 595 LLANI 599
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 74/124 (59%), Gaps = 16/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + ++ + VTF+A+L+AC+ A LV+ GL F+ ++ + ++P +EHY C++ LLGRA
Sbjct: 500 EMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRA 559
Query: 64 GLLSEANEF----------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L EA E L+SAC++H + L E+ + L++ P+ Y++L
Sbjct: 560 GRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIIL 619
Query: 108 SNVH 111
SN++
Sbjct: 620 SNMY 623
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 19/126 (15%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E GLR + VTF+ VLTAC+ A +V+LG F+S+ ++ + P EHYGC++DL
Sbjct: 506 ELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDL 565
Query: 60 LGRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAG L +A ++ +WS AC+IHG V +L+L P +
Sbjct: 566 LCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTH 625
Query: 105 VVLSNV 110
+ L+N+
Sbjct: 626 ITLANI 631
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLS- 67
G++ + TF+ +L C A LV+ G F+S+ F + P +EHYGC+VDLLGRAGLL
Sbjct: 220 GIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDE 279
Query: 68 ----------EANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
EAN +W AC+IH +L+ K+L+EL+P + YV+LSN+++
Sbjct: 280 AHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 338
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++ N +TF+ VL+AC A LVE G +F ++ + V P ++HYGC++D+LGRA
Sbjct: 542 DMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRA 601
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E L +AC+ HG V + + L L P H V+LS
Sbjct: 602 GLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLS 661
Query: 109 NVH 111
N++
Sbjct: 662 NIY 664
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 19/126 (15%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
E++E GLR + VTF+ VLTAC+ A +V+LG F+S+ ++ + P EHYGC++DL
Sbjct: 506 ELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDL 565
Query: 60 LGRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAG L +A ++ +WS AC+IHG V +L+L P +
Sbjct: 566 LCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTH 625
Query: 105 VVLSNV 110
+ L+N+
Sbjct: 626 ITLANI 631
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + ++AN++TFVA+L+ C LV GL LF S+ + + P MEHY C+V LL
Sbjct: 922 LFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLL 981
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A F+ W S+C +H V+L +++LE++P+ YV
Sbjct: 982 GRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYV 1041
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 1042 LLSNMYS 1048
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M + L ++V F +LTAC+RA LV+ G F + ++ +VP ++HY C+VDLL
Sbjct: 410 LFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLL 469
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA E + S ACK++ +L+ V RL+E++PE+ YV
Sbjct: 470 SRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYV 529
Query: 106 VLSNVH 111
+LSN++
Sbjct: 530 LLSNIY 535
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ N +TF+AVLTAC+ A LV+ G + F S+ + +VP +EH + D+LGRAG L EA
Sbjct: 370 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAY 429
Query: 71 EFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
F+ WS AC++H L+ EV K+++EL+P +VVLSN+++
Sbjct: 430 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYS 486
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N+V ++ +L+AC+ A LVE G F ++ + P +EHYGC+VDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+H +K+ V + L+EL P YV LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 110 VH 111
++
Sbjct: 482 LY 483
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + + +EVTF+ +L+AC LVE G + F + +F + P ++HY C+VDLLGRA
Sbjct: 431 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRA 490
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E + S AC+IHG V + +LL++ P YV+L+
Sbjct: 491 GLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLA 550
Query: 109 NVH 111
N++
Sbjct: 551 NMY 553
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E ++ + V+FV+VL+AC A LVE G ++FHS+ ++ + P +EHY C+VDLLGRAG
Sbjct: 369 MQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 428
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L E F+ W A C++H VKL L++L+P + +VVLS+
Sbjct: 429 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSS 488
Query: 110 VH 111
++
Sbjct: 489 IY 490
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+ + ++ TFV +L++C+R LV G E F + ++ + P MEHY C+VDL
Sbjct: 498 LFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLF 557
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG S+A +F+ W A C++HG + L K++LE++PE Y+
Sbjct: 558 ARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYI 617
Query: 106 VLSNVH 111
+LS++H
Sbjct: 618 ILSSIH 623
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 19/128 (14%)
Query: 4 EMYEK----GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+++EK G +TFV VL AC+R LV+ G F + ++++ MEHYGC+VDL
Sbjct: 352 QLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDL 411
Query: 60 LGRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAGL+ EA E LW SACK HG V L VG +L+EL P H Y
Sbjct: 412 LSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYY 471
Query: 105 VVLSNVHT 112
V+L++++
Sbjct: 472 VLLASIYA 479
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
GL+ +++TF+ +L++C+ + LV G F ++ +F +VP MEH C+VD+LGRAGL+ E
Sbjct: 369 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 428
Query: 69 ANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A+ F L SAC+IH ++L EV K++ L PE +V+LSN+++
Sbjct: 429 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 487
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + + +EVTF+ +L+AC LVE G + F + +F + P ++HY C+VDLLGRA
Sbjct: 388 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRA 447
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA E + S AC+IHG V + +LL++ P YV+L+
Sbjct: 448 GLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLA 507
Query: 109 NVH 111
N++
Sbjct: 508 NMY 510
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+ N+V ++ +L+AC+ A LVE G F ++ + P +EHYGC+VDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L ACK+H +K+ V + L+EL P YV LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 110 VH 111
++
Sbjct: 482 LY 483
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+ + ++ TFV +L++C+R LV G E F + ++ + P MEHY C+VDL
Sbjct: 498 LFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLF 557
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG S+A +F+ W A C++HG + L K++LE++PE Y+
Sbjct: 558 ARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYI 617
Query: 106 VLSNVH 111
+LS++H
Sbjct: 618 ILSSIH 623
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +G++ + V FV VLTAC+ VE GL +F SL+ + + P +EHYGC+VDLL
Sbjct: 385 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLL 443
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++H V+++ +R+ EL P+ +V
Sbjct: 444 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 503
Query: 106 VLSNVH 111
+LSN++
Sbjct: 504 LLSNIY 509
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M E+ + ++ TFV +L++C+R LV G E F + ++ + P MEHY C+VDL
Sbjct: 498 LFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLF 557
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG S+A +F+ W A C++HG + L K++LE++PE Y+
Sbjct: 558 ARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYI 617
Query: 106 VLSNVH 111
+LS++H
Sbjct: 618 ILSSIH 623
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ + VTF+A+++AC A V+ G+ F + E ++ MEHY C+VDL GRAG
Sbjct: 544 MLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAG 603
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA + +W AC++HG V+L+ + L +L P++ YV+LSN
Sbjct: 604 RLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSN 663
Query: 110 VH 111
VH
Sbjct: 664 VH 665
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ ++V F+ VLTAC+ A +V+ G F S+ E+ + P +EHYGC+VD+ GR
Sbjct: 329 EEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGR 388
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ + EF +W +AC+ HG ++L + + LL P H YV+L
Sbjct: 389 AGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVML 448
Query: 108 SNVH 111
SNV+
Sbjct: 449 SNVY 452
>gi|295828396|gb|ADG37867.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMITDFSVTPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM KG+ +VTF+++L AC+ LVE G+E S+ ++ P MEHY CVVD+L
Sbjct: 349 LYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDML 408
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA F L AC IHG ++ + L+ PE Y+
Sbjct: 409 GRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYI 468
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 469 LLANIYS 475
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 15/118 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
GLR + VTF+AVL AC+ A LV+LG F+SL ++ P +HYGC++DLL RAG L++
Sbjct: 467 GLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLND 526
Query: 69 A-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
A ++ +WS AC+IHG V +++L+L P ++ L+N++
Sbjct: 527 AESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMY 584
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM ++G+ + ++F+ V++AC+ A LV+ G + F S+ + V P EHY ++DLL
Sbjct: 513 LFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLL 572
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG SEA E + W A C+IHG + L E +RL EL+P+H YV
Sbjct: 573 CRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYV 632
Query: 106 VLSNVH 111
+LSN++
Sbjct: 633 LLSNMY 638
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + + N+VTFVA+L AC+ +LVE G F S+ + + P +EHYGC+VDLL
Sbjct: 254 LFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLL 313
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+GLL EA E +++ AC+IH ++ +GK + EL +H +V
Sbjct: 314 GRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHV 373
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 374 LLANLYS 380
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M ++G N+ TF+ VL+ACA + ++ G F + +++ P +EHYGC+VDLL
Sbjct: 292 MFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLL 351
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGL+ + E LW SAC+ H +L+ V KRL+EL+P Y+
Sbjct: 352 GRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYL 411
Query: 106 VLSNVH 111
+LSN++
Sbjct: 412 LLSNIY 417
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + G++ +EVT+VAVL+AC LV+ G F + E V P + HY C+VD+L
Sbjct: 288 LFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDIL 347
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR GL+ EA+E +W ++C+IHG ++L+ K L E++P+ YV
Sbjct: 348 GRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYV 407
Query: 106 VLSNVH 111
+L+N +
Sbjct: 408 LLANTY 413
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ + VTFV +LTA A LV+ GL F+S+ + + P +EH+ C++DLLGRA
Sbjct: 395 KMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRA 454
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA E+ L SAC++HG V ++LL+LQP YV+LS
Sbjct: 455 GRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLS 514
Query: 109 NVH 111
N++
Sbjct: 515 NLY 517
>gi|345288649|gb|AEN80816.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288651|gb|AEN80817.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288653|gb|AEN80818.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288655|gb|AEN80819.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288657|gb|AEN80820.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288659|gb|AEN80821.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288661|gb|AEN80822.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288663|gb|AEN80823.1| AT1G13410-like protein, partial [Capsella rubella]
Length = 195
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 63 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMITDFSVTPQIEHCGCVVDLLSRA 122
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 123 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 182
Query: 109 NVH 111
N++
Sbjct: 183 NIY 185
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ N +TF+ VL AC+ LVE GL F + + + P ++H C+VDLLGRAG
Sbjct: 522 MKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAG 581
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA F L SAC++H A V +R++EL+PE YV+L N
Sbjct: 582 RLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYN 641
Query: 110 VH 111
++
Sbjct: 642 IY 643
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 15/117 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
++ N+VTFV++L+AC+ A L+E G+++FH ++ E++++P +EHYG +VDLLGR G L +A
Sbjct: 506 VKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKA 565
Query: 70 NEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+ L AC+IH +K+ L L P H Y +LSN++
Sbjct: 566 LDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIY 622
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M G+ + VTFV +LTAC A LVE G F+S+ + + P +EH+ C++DLLGR
Sbjct: 394 EKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGR 453
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA E+ L SAC++HG + + + +LL+LQP YV+L
Sbjct: 454 AGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLL 513
Query: 108 SNVH 111
SN++
Sbjct: 514 SNLY 517
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + G + ++F++VL AC+ LVE G +LF S++ E + P +EHY C+VDLL
Sbjct: 365 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 424
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L EA + + W AC+IH V+L+ KRL +L+P + YV
Sbjct: 425 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYV 484
Query: 106 VLSNVH 111
+L++++
Sbjct: 485 LLADIY 490
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 1 MVDEMYEKGLR-ANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
M EM G NE+TF VL+AC LVE G + F + ++++VP + HYGC+VDL
Sbjct: 489 MFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDL 548
Query: 60 LGRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG + EA + + S AC HG ++ VGK+L++L P+H
Sbjct: 549 LGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQ 608
Query: 105 VVLSNVHT 112
+LSN++
Sbjct: 609 TMLSNIYA 616
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G+ + TFV +L AC A LV+ G + F+S+ F + P +EHYGC+VDLLGRA
Sbjct: 338 QMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRA 397
Query: 64 GLLS-----------EANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EAN +W A C++H +L V K+L+ L+P + YV+LS
Sbjct: 398 GFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLS 457
Query: 109 NVHT 112
N+++
Sbjct: 458 NIYS 461
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +G + + VTF VLTAC+ A L + GL + ++ E + MEHYGCVVDLLGR
Sbjct: 293 EAMRREGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGR 352
Query: 63 AGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA NE L + C++HG V L+ ++ + LLE P YV+L
Sbjct: 353 AGRLGEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLL 412
Query: 108 SNVH 111
SN++
Sbjct: 413 SNIY 416
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M G + +VTF+++L AC+ + GLE+ +S+ ++ V+P MEHY CVVD+L
Sbjct: 412 LFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F LW AC HG ++ ++LL L P YV
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYV 531
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 532 LLSNIYS 538
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++A TF+A+L+AC+ + L + GL+ +H ++ F ++P EH+ CVVD+LGRA
Sbjct: 763 KMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRA 822
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA++F L SAC +K+ V K LL L+PE+ YV +S
Sbjct: 823 GRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMS 882
Query: 109 NVH 111
N++
Sbjct: 883 NLY 885
>gi|295828390|gb|ADG37864.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMITDFSVTPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ + VTF+A+++AC A V+ G+ F + E ++ MEHY C+VDL GRAG
Sbjct: 643 MLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAG 702
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA + +W AC++HG V+L+ + L +L P++ YV+LSN
Sbjct: 703 RLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSN 762
Query: 110 VH 111
VH
Sbjct: 763 VH 764
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +GLR + +T+V V +AC A LV G + F + +++P + HY C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L SAC+++ + L +RLL L+PE+ Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 106 VLSNVHT 112
L+N+++
Sbjct: 622 ALANLYS 628
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M GL NEVTF+ VL AC + LV+ G +LF + +++ P +HYGC+VDLLGR
Sbjct: 407 DRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGR 466
Query: 63 AGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGL+ EA + F W SAC+ HG + S ++ + EL+ YV+L
Sbjct: 467 AGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLL 526
Query: 108 SNVHT 112
SN++
Sbjct: 527 SNMYA 531
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M ++G++ ++VTF +VL+AC LVE G + F S+ ++ + P++EHY C VDLLGR
Sbjct: 489 EQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 548
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + W SAC+IH V+ + +L+L P+ YV L
Sbjct: 549 AGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVAL 608
Query: 108 SNVH 111
SN++
Sbjct: 609 SNIY 612
>gi|413953445|gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]
Length = 508
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G + + +TFV V+ AC LV+ G LF+S+ GEF + P +EHYGC+VDLLGRAGLL E
Sbjct: 316 GAKPDGITFVGVILACTHGGLVDEGKLLFNSMRGEFGLKPRIEHYGCMVDLLGRAGLLKE 375
Query: 69 ANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A+ + S AC HG +L+ ++L+ L+P + V+LSN++
Sbjct: 376 ADSLIASMPMEPDAVIWGALLGACSFHGNFELAEIAVEKLMHLEPHNTANLVILSNIYA 434
>gi|357117515|ref|XP_003560512.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 474
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+M +G + +EV F++V++ACA ++LV G +LF S++ E+ + P MEHYG +VDLL R
Sbjct: 301 SQMLRQGFQPDEVVFLSVISACAHSKLVSEGRQLFKSMVQEYRITPWMEHYGSMVDLLCR 360
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G+L EA EF +W A + HG L +V L++++P H Y++
Sbjct: 361 SGMLDEAFEFVLAMPVKPDPVIWRVLTGAWRDHGNASLGMKVIGHLIDVEPNHGGNYLLA 420
Query: 108 SNVH 111
SN++
Sbjct: 421 SNLY 424
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+GL ++V +V V +AC+ A LVE GL+ F S+ E ++ P ++HYGC+VDLLGR
Sbjct: 291 EMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRF 350
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G+L EA N+ +W SACK+H +++ + L L + Y+VL+
Sbjct: 351 GMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLA 410
Query: 109 NVH 111
N++
Sbjct: 411 NMY 413
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + + VTFV++L+AC LV+ GL + S+ EF V P +EH C++DLLGR+
Sbjct: 793 EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 852
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LS A N+ W +AC+IHG ++L+ + + LLEL P YV+ S
Sbjct: 853 GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 912
Query: 109 NV 110
NV
Sbjct: 913 NV 914
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +G++ + V FV VLTAC+ VE GL +F SL+ + + P +EHYGC+VDLL
Sbjct: 553 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLL 611
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++H V+++ +R+ EL P+ +V
Sbjct: 612 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 671
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 672 LLSNIYA 678
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G+R + VT V V++ACA+ R +++G E + +GE + +VD+ +
Sbjct: 222 EMVEAGIRPSSVTMVCVISACAKLRDLDMG-ERVCAYIGELGLKLNKVMVNALVDMYMKC 280
Query: 64 GLLSEANEFL 73
G + A
Sbjct: 281 GAIDAAKRLF 290
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM +G+ +VTF+++L AC+ A LVE G+EL S+ + + P EHY CVVD+LGR
Sbjct: 442 EEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGR 501
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L+EA +F L AC IHG ++ RL P YV++
Sbjct: 502 AGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLM 561
Query: 108 SNVHT 112
+N+++
Sbjct: 562 ANIYS 566
>gi|125535277|gb|EAY81825.1| hypothetical protein OsI_36997 [Oryza sativa Indica Group]
Length = 515
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G NEVTF+ VL CA A V++G ++F S+ E + P++EHYGC+VDLLGR+
Sbjct: 353 EMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYGCMVDLLGRS 412
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W SAC H + ++ K L+ L+P + YV+L+
Sbjct: 413 GLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLEPWNSGNYVLLA 472
Query: 109 NVHT 112
N++
Sbjct: 473 NLYA 476
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++A TF+A+L+AC+ + L + GL+ +H ++ F ++P EH+ CVVD+LGRA
Sbjct: 763 KMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRA 822
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA++F L SAC +K+ V K LL L+PE+ YV +S
Sbjct: 823 GRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMS 882
Query: 109 NVH 111
N++
Sbjct: 883 NLY 885
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + G+ N+ TF+ +LTAC + LV+ G ELFH L+ + + P +HY CVVDLL
Sbjct: 390 LYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH-LMPDHGIEPHHQHYSCVVDLL 448
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F L SACKIH V+L ++L L P + YV
Sbjct: 449 GRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYV 508
Query: 106 VLSNVH 111
LSN++
Sbjct: 509 QLSNLY 514
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + + VTFV++L+AC LV+ GL + S+ EF V P +EH C++DLLGR+
Sbjct: 802 EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 861
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G LS A N+ W +AC+IHG ++L+ + + LLEL P YV+ S
Sbjct: 862 GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 921
Query: 109 NV 110
NV
Sbjct: 922 NV 923
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ N +TF+ VL AC+ LVE GL F + + + P ++H C+VDLLGRAG
Sbjct: 443 MKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAG 502
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L+EA F L SAC++H A V +R++EL+PE YV+L N
Sbjct: 503 RLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYN 562
Query: 110 VH 111
++
Sbjct: 563 IY 564
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M E G +TF++VL ACA VE G F+ + +F + P H+ C++DLL
Sbjct: 432 LFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLL 491
Query: 61 GRAGLLSEANE-----------FLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA F WS AC+IHG V+L+ + RLL+L P + YV
Sbjct: 492 GRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYV 551
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 552 MLANIYS 558
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ + ++F AVLTAC+ RLVELG LF + ++++VP +EHY C++DLLGRAG LSEA
Sbjct: 400 KIDHLSFTAVLTACSHGRLVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAY 459
Query: 71 E-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
+ F+W AC+ HG + L+ + L EL+P + ++LSN++
Sbjct: 460 DMIKTMPVEPDLFVWGALLGACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLY 515
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ ++V F+ VLTAC+ A +V+ G F ++ E+ + P +EHYGC+VD+ GR
Sbjct: 320 EEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGR 379
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ A EF +W SAC+ HG ++L + + LL P H Y++L
Sbjct: 380 AGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIML 439
Query: 108 SNV 110
SNV
Sbjct: 440 SNV 442
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM G+ ++V F+ VLTAC+ A +V+ G F ++ E+ + P +EHYGC+VD+ GR
Sbjct: 320 EEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGR 379
Query: 63 AGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG++ A EF +W SAC+ HG ++L + + LL P H Y++L
Sbjct: 380 AGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIML 439
Query: 108 SNV 110
SNV
Sbjct: 440 SNV 442
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G R N +TFVAVL+ACA + L++ G +F S+ + +VP +EH C+VD+
Sbjct: 314 LFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMF 373
Query: 61 GRAGLLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAGLL++A +F+ W+ AC++H L +V + +L ++PE+ Y
Sbjct: 374 GRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHY 433
Query: 105 VVLSNVH 111
V+LSN++
Sbjct: 434 VMLSNIY 440
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G R + TF+++L+AC+ + LV GL + ++L F V EH+ C+VD+LGRA
Sbjct: 671 EMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRA 730
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF+ W SAC HG +K+ EV + L EL+PE+ Y+ LS
Sbjct: 731 GRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLS 790
Query: 109 NVH 111
N++
Sbjct: 791 NMY 793
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEANEF 72
NE+TFV VL AC+ A ++ G + F + E+++ P + H GC+VD+LGRAGLL EA +F
Sbjct: 372 NEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKF 431
Query: 73 ---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
L +ACK+HG V+L+ ++L ++ +H YV++SN++
Sbjct: 432 IDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLY 485
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G++ +++TFV +L+AC+ + +++LG +F ++ ++++ P +EHYGC++DLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G +GL EA + +W ACK+HG V+L + L++++PE+ YV
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 106 VLSNVH 111
+LSN++
Sbjct: 577 LLSNIY 582
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G N+VTFVAVL+ACA A LV G + F S+ + +VP +EHY +VD+ GRAG
Sbjct: 298 MRQQGPPPNDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAG 357
Query: 65 LLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
LL +A F+ W+ ACK+H L EV +RL+ L+PE V+LS
Sbjct: 358 LLDDAMRFIHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLS 417
Query: 109 NVHT 112
N++
Sbjct: 418 NLYA 421
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE-FEVVPIMEHYGCVVDLLGR 62
EM G + TFVA L+ACA+A ++LG ++ ++ E E+ ++ +V++ R
Sbjct: 196 EMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLG--AALVNMYAR 253
Query: 63 AGLLSEANEFL 73
GL+++A E+
Sbjct: 254 CGLVNKAREWF 264
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + + N +TF+AVL ACA + +E G E FH + + + P ++HY C+VDLL
Sbjct: 1042 LFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLL 1101
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA E L SACKIH VK++ + L L+P+ YV
Sbjct: 1102 GRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLEPQMAAPYV 1161
Query: 106 VLSNVH 111
+SN++
Sbjct: 1162 EMSNIY 1167
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ + +TF A+L+AC + L+ G + F S++ ++ +VP +EHY C+VDLLGR
Sbjct: 851 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 910
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + +W A C+IH +K + K L +L+P + Y+++
Sbjct: 911 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILM 970
Query: 108 SNVHT 112
N+++
Sbjct: 971 MNLYS 975
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G+ +VTF+++L ACA LVE G+ S+ ++ + P MEHY CVVD++
Sbjct: 446 LYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMM 505
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA +F L AC IHG ++ +L PE Y+
Sbjct: 506 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYI 565
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 566 LLANIYS 572
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +EM ++G++ ++VTF+ VL AC+ + +V GL+ F S+ E+ +V ++HYGCV DLL
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L A +F LW SAC HG V + V +R+LEL H YV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 106 VLSNV 110
+ SN+
Sbjct: 446 IFSNL 450
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KGL+ VT ++VL+ACA +ELG H + + + +++ ++D+ +
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELG-RWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 64 GLLSEA 69
G L +A
Sbjct: 288 GSLEDA 293
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M GL NEV+F+ VL AC + LV+ GL+LF S+ +++ P EHYG VVDLLGR
Sbjct: 402 DRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGR 461
Query: 63 AGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGL+ EA F W SAC+ H V S ++ + + EL+ Y +L
Sbjct: 462 AGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYALL 521
Query: 108 SNVHT 112
SN++
Sbjct: 522 SNIYA 526
>gi|242053799|ref|XP_002456045.1| hypothetical protein SORBIDRAFT_03g029460 [Sorghum bicolor]
gi|241928020|gb|EES01165.1| hypothetical protein SORBIDRAFT_03g029460 [Sorghum bicolor]
Length = 615
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 16/116 (13%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ + +TF AVL ACA +V GL+ F+S+ F + P +EHYGC+VDLL RAGLL EA
Sbjct: 464 KPDGITFKAVLGACAHVGMVNEGLQHFYSM-SSFTIAPDIEHYGCIVDLLSRAGLLEEAF 522
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EF L SAC+ H + L+ +G+ + +L P +V++SN+H
Sbjct: 523 EFIKNMPIEPNPVIWGSLLSACRFHHEIDLARRIGQHITKLAPNDVGAHVLISNLH 578
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 15/114 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA--- 69
+EVTF+ VLTAC A LV+ G + F S+ G + + P + H+GC++DLLGRAG L EA
Sbjct: 355 DEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALET 414
Query: 70 --------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
N +W +AC++HG ++ + LLEL E+ Y++LSN++
Sbjct: 415 IGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLY 468
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G++ +++TFV +L+AC+ + VE LF SL + + P MEHY C+VDLLGR+G
Sbjct: 835 MIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSG 894
Query: 65 LLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA E L AC+ HG K+ VG L++ Q + R YV+LSN
Sbjct: 895 HLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSN 954
Query: 110 VH 111
++
Sbjct: 955 IY 956
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M +G+ NEVTF+ +L AC A LV G LF S++ ++ + P EHYGC+VDLL
Sbjct: 391 LFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLL 450
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L+ EA N +W +AC +HG +KL K++L+L P H V
Sbjct: 451 GRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASV 510
Query: 106 VLSNVH 111
+LS ++
Sbjct: 511 LLSKIY 516
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +GL+ ++ T VAVL+AC+ LV+ G + F+++ ++ V+P +HY C+VDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL +A+ + W A ++HG +L+ ++ ++PE+ YV+L
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 108 SNVH 111
SN++
Sbjct: 619 SNLY 622
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TF+ +L AC LVE G F S+ ++ ++P +EHYGC+VD+L RA
Sbjct: 264 QMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 323
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A F +W+ AC+I+ V+L+ +RL+EL+P++ YV+LS
Sbjct: 324 GRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLS 383
Query: 109 NVH 111
N++
Sbjct: 384 NIY 386
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E+GL+ +++TF+ VL+AC A LV+ G F+SL EF+++P +EHY C+VDLL R+G L
Sbjct: 450 EEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHL 509
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA +F L +AC+ V++ V R+++L+P + YVV S ++
Sbjct: 510 EEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 569
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 15/119 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G++ + +TFV V+ AC LV+ G +F+S+ +F + P +EHYGC+VDLLGRAGLL E
Sbjct: 337 GVKPDGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKE 396
Query: 69 A-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
A + +W AC HG ++L+ +L+ L+P++ V+LSN++
Sbjct: 397 AYSMIISMPAEPDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQNTANLVILSNIYA 455
>gi|295828392|gb|ADG37865.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMIXDFSVTPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V +M + G++ N+ TF+ +L +C L++ G FH++ + + P +EHYGC+VDLL
Sbjct: 361 LVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLL 420
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA++ L CKIH +L+ V K+L+ L+P + YV
Sbjct: 421 SRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV 480
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 481 MLSNIYS 487
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +EM ++G++ ++VTF+ VL AC+ + +V GL+ F S+ E+ +V ++HYGCV DLL
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L A +F LW SAC HG V + V +R+LEL H YV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 106 VLSNV 110
+ SN+
Sbjct: 446 IFSNL 450
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KGL+ VT ++VL+ACA +ELG H + + + +++ ++D+ +
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELG-RWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 64 GLLSEA 69
G L +A
Sbjct: 288 GSLEDA 293
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R N VTF++VL AC+ LVE G+E F S++ E+ + P ++H+GC++D+LGRA
Sbjct: 318 EMRRSGIRPNRVTFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRA 377
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W + C +G V++ K++L + E +VV+S
Sbjct: 378 GRLCEAEQVIGGLPMEVNSIVWRTLLACCSKYGEVEMGKRAMKKILHTERESGGDFVVVS 437
Query: 109 NVHT 112
N+ T
Sbjct: 438 NMLT 441
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + G+ N+ TF+ +LTAC + LV+ G ELFH L+ + + P +HY CVVDLL
Sbjct: 375 LYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH-LMPDHGIEPHHQHYSCVVDLL 433
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F L SACKIH V+L ++L L P + YV
Sbjct: 434 GRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYV 493
Query: 106 VLSNVH 111
LSN++
Sbjct: 494 QLSNLY 499
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G++ + VT VAVL+AC+ ++LV G LF + E+ + P ++H+ C+VDL
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A + L +AC IHG ++ ++LLE++PE+ YV
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 106 VLSNVH 111
+++N++
Sbjct: 590 LIANMY 595
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ N++T V++L AC+ A LVE GL F + ++ V ++HY CVVDLLGRAG
Sbjct: 1029 MLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAG 1088
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA +E LW AC+ H V L+ + LLELQP++ Y++LSN
Sbjct: 1089 RLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSN 1148
Query: 110 VH 111
++
Sbjct: 1149 IY 1150
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+ +++T ++L AC+ A LVE GL F S+ ++ V ++HY CVVDLLGRAG
Sbjct: 353 MLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAG 412
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA +E LW AC+ H V L+ + LLELQ ++ YV+LSN
Sbjct: 413 RLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSN 472
Query: 110 VH 111
++
Sbjct: 473 IY 474
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E+GL+ +++TF+ VL+AC A LV+ G F+SL EF+++P +EHY C+VDLL R+G L
Sbjct: 450 EEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHL 509
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA +F L +AC+ V++ V R+++L+P + YVV S ++
Sbjct: 510 EEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 569
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +EV ++AVL+AC+ + +++ G ELF LL + P +EHY CVVDLLGRA
Sbjct: 775 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 834
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W S C++HG ++L EVGK LL + ++ YV++S
Sbjct: 835 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 894
Query: 109 NVH 111
N++
Sbjct: 895 NLY 897
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ +M + N VTF + L+AC+ + LV+ G+ELFH++ +F P MEH+ CVVDLL
Sbjct: 479 LLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLL 538
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RA L +A F +WS AC+ V ++ ++L +L+PEH YV
Sbjct: 539 ARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYV 598
Query: 106 VLSNVH 111
LSN++
Sbjct: 599 TLSNIY 604
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G+R N++TFV VL+AC+ A +V+ L+ F + E+++ P+M+HY C++D+
Sbjct: 471 LFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMF 530
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L EA NEF+WS C+ G ++L ++LL L+P+ Y
Sbjct: 531 VRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYN 590
Query: 106 VLSNVH 111
+L N++
Sbjct: 591 LLLNMY 596
>gi|302142104|emb|CBI19307.3| unnamed protein product [Vitis vinifera]
Length = 683
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G+R N++TFV VL+AC+ A +V+ L+ F + E+++ P+M+HY C++D+
Sbjct: 392 LFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMF 451
Query: 61 GRAGLLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L EA NEF+WS C+ G ++L ++LL L+P+ Y
Sbjct: 452 VRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYN 511
Query: 106 VLSNVH 111
+L N++
Sbjct: 512 LLLNMY 517
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + ++ + V+++AVL+AC+ LVE G + F +L + + P HY C+VDLL
Sbjct: 651 MFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLL 709
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA + L AC+I+G V+L + L EL+P+HC Y+
Sbjct: 710 GRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYI 769
Query: 106 VLSNVH 111
+LSN++
Sbjct: 770 LLSNIY 775
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GL +E+TF+ VL+AC LV+ G + F+ + ++ + P ++HY C+VDLLGRA
Sbjct: 479 EMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRA 538
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + W A +IHG V + +LLEL P YV+L+
Sbjct: 539 GFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLA 598
Query: 109 NVH 111
N++
Sbjct: 599 NMY 601
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM GL +E+TF+ VL+AC LV+ G + F+ + ++ + P ++HY C+VDLLGRA
Sbjct: 479 EMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRA 538
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + W A +IHG V + +LLEL P YV+L+
Sbjct: 539 GFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLA 598
Query: 109 NVH 111
N++
Sbjct: 599 NMY 601
>gi|356546597|ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Glycine max]
Length = 525
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 16/119 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E G+ N VTF++ L+ACA A LV+ G E+F S+ E+ V P MEHY C+VDLLGRAG+L
Sbjct: 369 EYGIVPNYVTFLSALSACAHAGLVDKGWEIFQSMENEYLVKPGMEHYACMVDLLGRAGML 428
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPE-HCRRYVVLSN 109
++A EF L S+C++HG ++++ L +L YV LSN
Sbjct: 429 NQAWEFVMRMPERPNLDVWAALLSSCRLHGNLEMAKLAANELFKLNATGRPGAYVALSN 487
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++GL N+VTFV VL AC+ + L+E G F + G + + P+ EHY C+VDLLGRA
Sbjct: 401 KMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRA 460
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A L +AC+++G V+L + L E+ P YV+L+
Sbjct: 461 GQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLA 520
Query: 109 NVH 111
N +
Sbjct: 521 NTY 523
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M + + N+VTF+A+L+AC+ L +LG F+ ++ ++ + P +EHYGC+VDLL
Sbjct: 299 MFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLL 358
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L E AN +W +A + HG L E L+EL+P + Y+
Sbjct: 359 GRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEPSNSGNYI 418
Query: 106 VLSNV 110
+LSN+
Sbjct: 419 LLSNI 423
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
M E+G + + VTF+A+++ACA A LVE GL+LF + E+ + P MEH+ C+VDL R+
Sbjct: 636 RMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRS 695
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A +F +W AC++H V+L+ + L +L P + YV++S
Sbjct: 696 GRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMS 755
Query: 109 NVHT 112
N++
Sbjct: 756 NINA 759
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + + ANEVTF+++L AC+ + L E G E F ++ ++++ P +EHY CVVDLL
Sbjct: 383 LFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLL 442
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + +W +ACK+H +++ + + +++L P YV
Sbjct: 443 GRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYV 502
Query: 106 VLSNVH 111
+LSN+H
Sbjct: 503 LLSNIH 508
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + + +N++TFVA+L+ C+ LV GL LF S+ + + P MEHY C+V LL
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F+ W S+C IH V L +++LE++P+ YV
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV 672
Query: 106 VLSNVH 111
+LSN++
Sbjct: 673 LLSNMY 678
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 76/126 (60%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M K R + +TFV VL AC+R RL++ G L++ ++ ++ + P ++HY C++DLL
Sbjct: 337 LFDKM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLL 395
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G G L EA + + W A CKIHG V+L+ ++L+EL+P+ YV
Sbjct: 396 GHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYV 455
Query: 106 VLSNVH 111
+L+N++
Sbjct: 456 ILANMY 461
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M GL+ + VTF+ VL+AC+RA LVE G + F S+ + ++VPI +HY C++DL
Sbjct: 467 LFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLY 526
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G EA EF L S+C++ G +++ + LLE P++ YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 106 VLSNVH 111
+L ++H
Sbjct: 587 LLCSMH 592
>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G R + TF+++L+AC+ + LV GL + ++L F V EH+ C+VD+LGRA
Sbjct: 690 EMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRA 749
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF+ W SAC HG +K+ EV + L EL+PE+ Y+ LS
Sbjct: 750 GRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLS 809
Query: 109 NVH 111
N++
Sbjct: 810 NMY 812
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 17/128 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M E ++ + VTFV VL+AC+ A V G + EF V+P +EHY C++D+L
Sbjct: 369 MFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDML 428
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHC--RR 103
GRAG L EA N LW AC++HG +L + VG+++ +L+P+HC
Sbjct: 429 GRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGS 488
Query: 104 YVVLSNVH 111
Y+++S+++
Sbjct: 489 YILMSSLY 496
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM G++ NEVTFV ++ AC+ A LV G LF +++ + + P ++HY C++DL
Sbjct: 327 LYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLF 386
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA +E W S+CK HG +++ + LL L+PE Y+
Sbjct: 387 SRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYI 446
Query: 106 VLSNVH 111
+LSN++
Sbjct: 447 LLSNIY 452
>gi|295828394|gb|ADG37866.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMITDFSVTPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVXIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++ N VTFV+VL+AC+ + LV+ G+++F S+ F VVP EH +VDLLGRAG
Sbjct: 494 MIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAG 553
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F+ W +AC+ H K+S K LL+L P+H Y +L+N
Sbjct: 554 ELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTN 613
Query: 110 VH 111
++
Sbjct: 614 IY 615
>gi|295828398|gb|ADG37868.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F+S++ +F V P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFNSMITBFSVTPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +EM ++G++ ++VTF+ VL AC+ + +V GL+ F S+ E+ +V ++HYGCV DLL
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L A +F LW SAC HG V + V +R+LEL H YV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 106 VLSNV 110
+ SN+
Sbjct: 446 IFSNL 450
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM KGL+ VT ++VL+ACA +ELG H + + + +++ ++D+ +
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELG-RWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 64 GLLSEA 69
G L +A
Sbjct: 288 GSLEDA 293
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E+GL+ +++TF+ VL+AC A LV+ G F+SL EF+++P +EHY C+VDLL R+G L
Sbjct: 450 EEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHL 509
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA +F L +AC+ V++ V R+++L+P + YVV S ++
Sbjct: 510 EEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 569
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R + +TFVAVL AC A LV +G+ F S++ +++V P +HY C+VDLLGRA
Sbjct: 349 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 408
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + + S AC++H V+L+ ++LL+L ++ YV L+
Sbjct: 409 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 468
Query: 109 NVH 111
N++
Sbjct: 469 NIY 471
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 16/127 (12%)
Query: 1 MVDEMYE-KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ DEM GL+ ++TF+ L ACA A LV G+++F S+ E+ + P +EHYGC+V L
Sbjct: 345 LFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSL 404
Query: 60 LGRAGLLS-----------EANEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG L EA+ LWS +CK+HG L E+ + L+ + Y
Sbjct: 405 LGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIY 464
Query: 105 VVLSNVH 111
V+LSN++
Sbjct: 465 VLLSNIY 471
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G++ N+VT++AVL+AC+ LV G E F S+ + ++P MEHY C+VDLL R+
Sbjct: 541 DMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARS 600
Query: 64 GLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA EF+ W AC+ H +++ K ++EL+P YV+LS
Sbjct: 601 GLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLS 660
Query: 109 NVH 111
N++
Sbjct: 661 NLY 663
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + ++ N++TF++V++AC+ + VE GL LF S+ ++ + P M+HY +VDLL
Sbjct: 535 LFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLL 594
Query: 61 GRAGLLSEANEFLW---------------SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L +A F+ ACKIH V+L + ++L +L P+ +V
Sbjct: 595 GRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHV 654
Query: 106 VLSNVH 111
+L+N++
Sbjct: 655 LLANIY 660
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M ++ ++ NEVTF+ VL+AC+ + LVE G + F S+ ++ + P M+HYG +VDLL
Sbjct: 566 LFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLL 625
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L+EA +F + AC+IH V+L + R+ +L P+ +V
Sbjct: 626 GRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHV 685
Query: 106 VLSNVH 111
+L+N++
Sbjct: 686 LLANIY 691
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + + +N++TFVA+L+ C+ LV GL LF S+ + + P MEHY C+V LL
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F+ W S+C IH V L +++LE++P+ YV
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV 672
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 673 LLSNMYA 679
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G R NE+TFV++L+AC+ A LVE F + E+ + P+++HYGC+VD+
Sbjct: 297 LFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMF 356
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A NE +WS+ C+ HG ++L+ RLLEL+P+ YV
Sbjct: 357 VRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYV 416
Query: 106 VLSNVH 111
+L N++
Sbjct: 417 LLLNMY 422
>gi|341606131|gb|AEK83168.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG++ ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGVKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 SLSNI 185
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++G A V F+ +L+ACA A LVE G E F ++ G+ VVP EHYGC+VDLLGR G
Sbjct: 525 MLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKG 584
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L++A+ L AC+I+G + +R+LEL+ H YV L N
Sbjct: 585 RLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCN 644
Query: 110 VHT 112
+++
Sbjct: 645 IYS 647
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V +M + G++ N+ TF+ +L +C L++ G FH++ + + P +EHYGC+VDLL
Sbjct: 816 LVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLL 875
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA++ L CKIH +L+ V K+L+ L+P + YV
Sbjct: 876 SRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV 935
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 936 MLSNIYS 942
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + + N++T+++V++AC+ + LV+ GL F S+ ++ + P M+HYG +VDLL
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLL 597
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA +F + ACKIH +++ + K+L EL P+ +V
Sbjct: 598 GRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHV 657
Query: 106 VLSNVH 111
+L+N++
Sbjct: 658 LLANIY 663
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ + +T+V VL+AC+ A V G + + E ++ P M HY C+VDLL
Sbjct: 414 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLL 473
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL SEA EF L SAC++H +L+ ++LL + P + Y
Sbjct: 474 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS 533
Query: 106 VLSNVHT 112
++NV++
Sbjct: 534 AIANVYS 540
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M ++ N +TF+AVLTAC+ A LV+ G + F+S+ ++ VP +EH + D L
Sbjct: 359 LFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTL 418
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ WS AC++H L+ EV K++ EL+P+ +V
Sbjct: 419 GRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHV 478
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 479 ILSNMYS 485
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ + +T+V VL+AC+ A V G + + E ++ P M HY C+VDLL
Sbjct: 520 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLL 579
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL SEA EF+ W SAC++H +L+ ++LL + P + Y
Sbjct: 580 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS 639
Query: 106 VLSNVHT 112
++NV++
Sbjct: 640 AIANVYS 646
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +EV ++AVL+AC+ + +++ G ELF LL + P +EHY CVVDLLGRA
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W S C++HG ++L EVGK LL + ++ YV++S
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 109 NVH 111
N++
Sbjct: 524 NLY 526
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M G++ + +TF+ +L AC+ A LVE G F S+ + + P EHY C++DLLGR
Sbjct: 158 NBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGR 217
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA E L W +AC++HG V+L L EL+P++ YV+L
Sbjct: 218 SGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLL 277
Query: 108 SNVHT 112
SN+++
Sbjct: 278 SNLYS 282
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM ++ + NEV F ++L+AC+ +V G E F S+ F + P M+HY C+VD++
Sbjct: 513 LFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVM 572
Query: 61 GRAGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L EA EF+ W + CK+H ++ E K++ L PE YV
Sbjct: 573 ARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYV 632
Query: 106 VLSNVHT 112
++SN++T
Sbjct: 633 LMSNLYT 639
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M E+GL+ N+ TF+++L+AC+ +RLVE G+ LF+S+ + + PI +HY C+VDLL RA
Sbjct: 524 KMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRA 583
Query: 64 GLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G EA E L S C+ H + L + +LL L + Y++LS
Sbjct: 584 GRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLS 643
Query: 109 NVH 111
N++
Sbjct: 644 NIY 646
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G+R N VTFVAVL AC LV G E F ++ E+ V P+++HYGC+VDL RAG
Sbjct: 288 MVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAG 347
Query: 65 LLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ +A + +W A +IHG V+ +LLEL P + YV+LSN
Sbjct: 348 RIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSN 407
Query: 110 VH 111
V+
Sbjct: 408 VY 409
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M G R + VTF+A+LTAC A LV GLE + F + P +EHY CVVD+L
Sbjct: 691 LFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDML 750
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA E +W S+C+ + + + +V +LLEL P+ YV
Sbjct: 751 GRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYV 810
Query: 106 VLSNVHT 112
++SN +
Sbjct: 811 LISNFYA 817
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G++ +++ F+ L AC LV+ G ELF S++ ++ + P +EHYGC+VDLL
Sbjct: 431 LFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLL 490
Query: 61 GRAGLLSEANE-----------FLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL+EA E +W A C+ H V+L+ V K +EL+P+ YV
Sbjct: 491 ARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYV 550
Query: 106 VLSNVHT 112
+L N++
Sbjct: 551 LLGNIYA 557
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+R TFV VL ACA A +V+ GLE F S+ + + P M+HYGCVVDLL R+G
Sbjct: 1120 MLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSG 1179
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L A EF L SA ++HG + L+ K+LLE P + Y++ SN
Sbjct: 1180 NLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSN 1239
Query: 110 VH 111
+
Sbjct: 1240 TY 1241
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M G R NE+TFV++L+AC+ A LVE F + E+ + P+++HYGC+VD+
Sbjct: 479 LFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMF 538
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A NE +WS+ C+ HG ++L+ RLLEL+P+ YV
Sbjct: 539 VRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYV 598
Query: 106 VLSNVH 111
+L N++
Sbjct: 599 LLLNMY 604
>gi|297844718|ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336082|gb|EFH66499.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M + G + + VAVL+AC+ A LVE G ++F+S+ F + P EHY C+VDLL
Sbjct: 522 MFDRMIKSGCHPDGIALVAVLSACSHAGLVEKGRKIFYSMSKRFGLEPQQEHYACIVDLL 581
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA+E L ++C++H + ++ + +L L+PE Y+
Sbjct: 582 GRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNMDIAEIIASQLRVLEPERTGSYM 641
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 642 LLSNIYS 648
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V +M + G++ N+ TF+ +L +C L++ G FH++ + + P +EHYGC+VDLL
Sbjct: 840 LVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLL 899
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA++ L CKIH +L+ V K+L+ L+P + YV
Sbjct: 900 SRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV 959
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 960 MLSNIYS 966
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G++ +++ F+ L AC LV+ G ELF S++ ++ + P +EHYGC+VDLL
Sbjct: 431 LFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLL 490
Query: 61 GRAGLLSEANE-----------FLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL+EA E +W A C+ H V+L+ V K +EL+P+ YV
Sbjct: 491 ARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYV 550
Query: 106 VLSNVHT 112
+L N++
Sbjct: 551 LLGNIYA 557
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 18/129 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M GL+ +++TFVAVL+AC A LVE G +LFHS+ + + P +EHYGC +DLL
Sbjct: 429 LFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLL 488
Query: 61 GRAGLLSEANEF------------------LWSACKIHGAVKLSHEVGKRLLELQPEHCR 102
GRAGLL EA E L SAC+ +G + + + L +++
Sbjct: 489 GRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSS 548
Query: 103 RYVVLSNVH 111
+ +L++++
Sbjct: 549 LHTLLASIY 557
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E + NE T V+ L+ACA R +ELG E+ + E ++ PIM + ++D+ + G +
Sbjct: 203 ESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGN--ALLDMYCKCGCV 260
Query: 67 SEANEFL 73
S A E
Sbjct: 261 SVAREIF 267
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ ++VTFV VL AC LVE GL F+S+ +F ++P +EH GCVVDLL
Sbjct: 224 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLL 283
Query: 61 GRAGLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L++A EF +W+ A K++ V + + L++L+P + +V
Sbjct: 284 SRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFV 343
Query: 106 VLSNVH 111
+LSN++
Sbjct: 344 MLSNIY 349
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 18/128 (14%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D M + N VTF+ VL AC+ A LV G FH + + + P+M HYG +VD+LG
Sbjct: 955 LDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILG 1014
Query: 62 RAGLLSEANEF---------------LWSACKIH---GAVKLSHEVGKRLLELQPEHCRR 103
RAGLL EA F L SAC IH + ++++V KRLLEL+P
Sbjct: 1015 RAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGN 1074
Query: 104 YVVLSNVH 111
+V+++N++
Sbjct: 1075 FVMVANMY 1082
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G + N +FVAVL+AC+ A LV+ G F SL ++ + P MEHY C+VDLLGRA
Sbjct: 627 KMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRA 686
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F+ W AC +G ++++ K L+L+P+ YV+LS
Sbjct: 687 GQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 746
Query: 109 NVH 111
N++
Sbjct: 747 NIY 749
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M G++ +E+T V VL+AC+ L++ G E F+S+ ++ V+P +HY C++DLLGR
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + L A +IHG +L + + + +++P++ YV+L
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLL 603
Query: 108 SNVH 111
SN++
Sbjct: 604 SNLY 607
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M L+ +E+TF+ VLTAC+ A LV+ G +LF+ + + V EHYGC+VDLL RAG
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433
Query: 65 LLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL+EA EF +W AC+++ ++L E + LLEL+P + Y++LSN
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSN 493
Query: 110 VH 111
++
Sbjct: 494 IY 495
>gi|224136906|ref|XP_002322445.1| predicted protein [Populus trichocarpa]
gi|222869441|gb|EEF06572.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE-FEVVPIMEHYGCVVDL 59
+ +EM +G+R NEVTF+ LTAC V G FH + + + + P +EHYGC+VDL
Sbjct: 330 LFEEMVREGMRPNEVTFLVTLTACCHCGFVGEGRRYFHWMKSQQYNLPPRLEHYGCMVDL 389
Query: 60 LGRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
L RAGLL EA E L S CK +G V+L E+ RL+E Y
Sbjct: 390 LCRAGLLDEALELTKAMPMLPDVRIMGALLSTCKANGNVELPREILDRLVEFDSRDSGVY 449
Query: 105 VVLSNV 110
V+LSN+
Sbjct: 450 VLLSNI 455
>gi|224123708|ref|XP_002319146.1| predicted protein [Populus trichocarpa]
gi|222857522|gb|EEE95069.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + GL+ N VTF++VL AC+ LV+ GL F+ ++ E V+P ++HYGCVVD+LGR
Sbjct: 183 ERMEKAGLKPNRVTFLSVLNACSHGGLVDEGLRCFYKMVNEHGVLPDIKHYGCVVDMLGR 242
Query: 63 AGLLSEA------------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
G L EA N +W AC HG V++ V ++++E++ + YV+
Sbjct: 243 TGRLEEAENMALEIPSEIVNVVIWRTLLGACSFHGNVEMGERVTRKIMEMERGYGGDYVL 302
Query: 107 LSNV 110
+ N+
Sbjct: 303 MYNI 306
>gi|341606175|gb|AEK83190.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGXKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYXIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 SLSNI 185
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE +S++ ++ + P HY C+VD LGR+G
Sbjct: 744 MKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 803
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L +ACKIHG V+L K+ +EL+P Y+ LSN
Sbjct: 804 RLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSN 863
Query: 110 V 110
+
Sbjct: 864 I 864
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 17/123 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+ ++ + VTFVAVLTAC+ LVE G + S+ ++ + P MEHY C VDL GRAG
Sbjct: 500 MREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAG 559
Query: 65 LLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQP-EHCRRYVVLS 108
L EA + S AC+ G ++L+ +V +LLE++P EHC YV+LS
Sbjct: 560 YLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHC-TYVILS 618
Query: 109 NVH 111
N++
Sbjct: 619 NMY 621
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G+ + +T+V VL+AC+ A V G + + E ++ P M HY C+VDLL
Sbjct: 520 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLL 579
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGL SEA EF+ W SAC++H +L+ ++LL + P + Y
Sbjct: 580 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS 639
Query: 106 VLSNVHT 112
++NV++
Sbjct: 640 AIANVYS 646
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ +M + G++ N+ TF+ +L +C L++ G FH++ + + P +EHYGC+VDLL
Sbjct: 408 LIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLL 467
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA++ L CKIH +L+ V +L+ L+P + YV
Sbjct: 468 SRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYV 527
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 528 MLSNIYS 534
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 16/123 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G++ + VTFV++L+AC+ + VE G F L+ E+ + P ++HYGC+VDLLGRA
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRA 669
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A F L AC+IHG ++L RL E+ ++ YV+LS
Sbjct: 670 GYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLS 729
Query: 109 NVH 111
N++
Sbjct: 730 NIY 732
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++G++ + +TFV +L+AC+ + LV+ G F + ++ + P ++HYGC+VDL
Sbjct: 540 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLY 599
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A F +W SAC++HG V L + L E++PEH +V
Sbjct: 600 GRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659
Query: 106 VLSNVH 111
+LSN++
Sbjct: 660 LLSNMY 665
>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 919
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
G+ N+ TF+++L+AC+ + + GL ++ + +F V P+ EH C+VD+LGRAG L
Sbjct: 765 NSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEHRVCIVDMLGRAGKL 824
Query: 67 SEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA EF+ W SAC HG KL EV + L E++P++ Y+ L+N +
Sbjct: 825 KEAYEFIIGIGEPQKAGVWGALLSACNYHGDTKLGTEVAEVLFEMEPDNASYYISLANTY 884
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + + +N++TFVA+L+ C+ LV GL LF S+ + + P MEHY C+V LL
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A +F+ W S+C IH V L +++LE++P+ YV
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV 672
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 673 LLSNMYA 679
>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
Length = 648
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 15/113 (13%)
Query: 13 NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEANEF 72
N +T V VLTAC+R L + G ELF ++ F + P +EHY CVVDLLGRAG+ +A E
Sbjct: 422 NYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEI 481
Query: 73 L-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ W A CK+HG +L ++L EL P+ +V+LSN+
Sbjct: 482 IQGMPMRPSISVWGALLGGCKMHGKTELGRVAAEKLFELDPQDSGNHVLLSNM 534
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ ++VTFV VL AC LVE GL F+S+ +F ++P +EH GCVVDLL RA
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + + L++L+P + +V+LS
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 109 NVH 111
N++
Sbjct: 400 NIY 402
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G R NE TF+ VL++CA LV G F ++ + + P EH+GC++DLLGRA
Sbjct: 410 EMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRA 469
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL ++ +E LW SA + +KL VGK+L+E++P Y++LS
Sbjct: 470 GLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLS 529
Query: 109 NVHT 112
N++
Sbjct: 530 NIYA 533
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M ++G+ + VTF +L+AC+ + LVE G + F + + V P ++HY C+VDLL
Sbjct: 410 LFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL 469
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L +A E + S AC+++G V+L EV ++LL L P R Y+
Sbjct: 470 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYI 529
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 530 MLSNIYS 536
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M ++G+ + VTF +L+AC+ + LVE G + F + + V P ++HY C+VDLL
Sbjct: 353 LFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL 412
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L +A E + S AC+++G V+L EV ++LL L P R Y+
Sbjct: 413 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYI 472
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 473 MLSNIYS 479
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++ ++ + +TFVAVLTAC+ LVE G S+ ++ + P MEHY C++DLLGRAG
Sbjct: 476 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 535
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQP-EHCRRYVVLS 108
L EA L AC+ G ++L+ +V LLEL+P EHC YV+LS
Sbjct: 536 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHC-TYVLLS 594
Query: 109 NV 110
++
Sbjct: 595 SM 596
>gi|125596785|gb|EAZ36565.1| hypothetical protein OsJ_20903 [Oryza sativa Japonica Group]
Length = 334
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G NEVTF+ VL CA A V++G ++F S+ E + P++EHYGC+VDL GR+
Sbjct: 172 EMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYGCMVDLFGRS 231
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W SAC H + ++ K L+ L+P + YV+L+
Sbjct: 232 GLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLEPWNSGNYVLLA 291
Query: 109 NVHT 112
N++
Sbjct: 292 NLYA 295
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M + + N++T+++V++AC+ + LV+ GL F S+ ++ + P M+HYG +VDLL
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLL 597
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA +F+ + ACKIH +++ + K+L EL P+ +V
Sbjct: 598 GRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHV 657
Query: 106 VLSNVH 111
+L+N++
Sbjct: 658 LLANIY 663
>gi|341606139|gb|AEK83172.1| At1g74600-like protein [Capsella grandiflora]
gi|341606151|gb|AEK83178.1| At1g74600-like protein [Capsella grandiflora]
gi|341606155|gb|AEK83180.1| At1g74600-like protein [Capsella grandiflora]
gi|341606157|gb|AEK83181.1| At1g74600-like protein [Capsella grandiflora]
gi|341606159|gb|AEK83182.1| At1g74600-like protein [Capsella grandiflora]
gi|341606163|gb|AEK83184.1| At1g74600-like protein [Capsella grandiflora]
gi|341606165|gb|AEK83185.1| At1g74600-like protein [Capsella grandiflora]
gi|341606167|gb|AEK83186.1| At1g74600-like protein [Capsella grandiflora]
gi|341606169|gb|AEK83187.1| At1g74600-like protein [Capsella grandiflora]
gi|341606171|gb|AEK83188.1| At1g74600-like protein [Capsella grandiflora]
gi|341606173|gb|AEK83189.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGXKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 XLSNI 185
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M G++ +++ F+ L AC LV+ G ELF S++ ++ + P +EHYGC+VDLL
Sbjct: 224 LFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLL 283
Query: 61 GRAGLLSEANE-----------FLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R GLL+EA E +W A C+ H V+L+ V K +EL+P+ YV
Sbjct: 284 ARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYV 343
Query: 106 VLSNVHT 112
+L N++
Sbjct: 344 LLGNIYA 350
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G++ + VTFV++L+AC+ A L+E G F S+ +F ++P +EHYGC+VDLL
Sbjct: 618 LFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLL 677
Query: 61 GRAGLLSE-----------ANEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L E AN +W AC+IHG V ++ + L+L ++ YV
Sbjct: 678 GRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYV 737
Query: 106 VLSNVH 111
LS+++
Sbjct: 738 ALSHMY 743
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G R NE TF+ VL++CA LV G F ++ + + P EH+GC++DLLGRA
Sbjct: 410 EMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRA 469
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL ++ +E LW SA + +KL VGK+L+E++P Y++LS
Sbjct: 470 GLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLS 529
Query: 109 NVHT 112
N++
Sbjct: 530 NIYA 533
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
++ +M + G++ N+ TF+ +L +C L++ G FH++ + + P +EHYGC+VDLL
Sbjct: 361 LIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLL 420
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA++ L CKIH +L+ V +L+ L+P + YV
Sbjct: 421 SRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYV 480
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 481 MLSNIYS 487
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M ++G++ ++VTF +VL+AC LVE G + F S+ ++ + P++EHY C VDLLGR
Sbjct: 441 DQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 500
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + W SAC++H V+ + +L+L P+ YV L
Sbjct: 501 AGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVAL 560
Query: 108 SNVH 111
S+++
Sbjct: 561 SSIY 564
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M + G +EVTFVA+L AC+R +V G ELFHS+ ++ +VP ++HY C+VDLL R
Sbjct: 587 NQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSR 646
Query: 63 AGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
G L+EA F+ W A C+IH V+L K +LEL+P +V+L
Sbjct: 647 VGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLL 706
Query: 108 SNVHT 112
+++
Sbjct: 707 CDLYA 711
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E G+ +E++F+++L AC+ A L++ G F + + + P +EHYGC+VDL
Sbjct: 525 IFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLY 584
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L +A F L AC HG ++L+ +V +RL EL P + V
Sbjct: 585 GRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 644
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 645 LLSNVY 650
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM N VTFV+VL+AC+ + +E G F S+ ++ + P+ EHY C+VDLLGRA
Sbjct: 343 EMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRA 402
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA F+ W AC+IH +L+ EV K+LL L+ + YV+LS
Sbjct: 403 GKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLS 462
Query: 109 NVHT 112
N++
Sbjct: 463 NIYA 466
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M ++G+ + VTF +L+AC+ + LVE G + F + + V P ++HY C+VDLL
Sbjct: 430 LFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL 489
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L +A E + S AC+++G V+L EV ++LL L P R Y+
Sbjct: 490 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYI 549
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 550 MLSNIYS 556
>gi|108712115|gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215767226|dbj|BAG99454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 684
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 15/120 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M KG++ +E TF+AVL+AC + LV+ GL FH + +F V P EHY CV DLL RAG
Sbjct: 531 MKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYACVTDLLVRAG 590
Query: 65 LLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L E+ EF+ W+ CK G + +V K+L+E++ H YV LS+
Sbjct: 591 RLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLMEMESSHPSLYVQLSS 650
>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
Length = 542
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G+ +VTF+++L ACA LVE G+ S+ ++ + P MEHY CVVD++
Sbjct: 332 LYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMM 391
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA +F L AC IHG ++ +L PE Y+
Sbjct: 392 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYI 451
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 452 LLANIYS 458
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +G + + VTF VLTAC+ L + GL + + E+ + MEHYGCVVDLLGR
Sbjct: 326 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 385
Query: 63 AGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA NE L + C++HG V ++ ++ + LLEL P YV+L
Sbjct: 386 SGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLL 445
Query: 108 SNVHT 112
SN++
Sbjct: 446 SNIYA 450
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + ++ +E+TFVAVL AC+ +V+ G E F + + + P ++HYGC+VD+L R
Sbjct: 371 KMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRG 430
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF L AC+IHG ++L+ + LL+ + + +V+LS
Sbjct: 431 GLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLS 490
Query: 109 NVH 111
N++
Sbjct: 491 NIY 493
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVV-PIMEHYGCVVDL 59
+ ++M G + + VT +++L+ACA + ++ G L L G F + P ++D+
Sbjct: 265 LFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDM 324
Query: 60 LGRAGLLSEANEFLW 74
+ G ++ A E W
Sbjct: 325 YAKCGSMTSALEVFW 339
>gi|357160774|ref|XP_003578871.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Brachypodium distachyon]
Length = 599
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++G++ N VT + V+ AC+ + LV+ GL L HS+ ++ + P HY C VD+L
Sbjct: 306 LFSEMIDRGVQPNSVTVLGVMNACSHSGLVDTGLHLLHSMQSKYGIGPCASHYTCAVDML 365
Query: 61 GRAGLLSEANEF-------------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRR 103
GRAG L EA E LW SAC+IH + L+ G+R+ E +
Sbjct: 366 GRAGRLDEAFELANEAQVEGRDALMLWSSLLSACRIHRRLDLATRAGQRVSEFNQDVAGA 425
Query: 104 YVVLSNVHT 112
VV+SN +T
Sbjct: 426 LVVMSNAYT 434
>gi|302808039|ref|XP_002985714.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
gi|300146623|gb|EFJ13292.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
Length = 659
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 19/128 (14%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+V EM +G+ + +T+V +L AC A L+E G + F +L+ + + EHYGCVVDLL
Sbjct: 532 LVREMQLEGVEPDSLTYVGLLLACTHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLL 591
Query: 61 GRAGLLSEANEFL---------------W----SACKIHGAVKLSHEVGKRLLELQPEHC 101
GRAG L+EA EFL W SA +HG ++L+ +R+L+L+P H
Sbjct: 592 GRAGKLAEAEEFLLGLRRAMPVAVSAAMWTSLLSAYGVHGDMELARRAARRVLDLEPRHP 651
Query: 102 RRYVVLSN 109
+VVLSN
Sbjct: 652 AAFVVLSN 659
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M ++G+ TFV VL ACA LV+ G+E F S+ + + P M+HYGCVVDLL R
Sbjct: 436 DQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCR 495
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L A F L SACK+HG + L+ V K+LL L P + YV+
Sbjct: 496 SGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLS 555
Query: 108 SNVH 111
S+ +
Sbjct: 556 SSTY 559
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 16/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M + G + + VTFVAVL++C+ + LV G LF +L ++ + P MEHY C+VDLLGR
Sbjct: 408 DQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGR 467
Query: 63 AGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQ-PEHCRRYVV 106
AGLL EA+E +W A C++H +++ E L L E Y++
Sbjct: 468 AGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYML 527
Query: 107 LSNVH 111
LSN++
Sbjct: 528 LSNIY 532
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 16/122 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
E ++ + VTF+AVL+ C+ L + GLE+F ++ G E+ +EHYGCV+DLLGRAG
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGR 366
Query: 66 LSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA E + W AC++H + VG RLLE++PE+ YV+LSN+
Sbjct: 367 VEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNL 426
Query: 111 HT 112
+
Sbjct: 427 YA 428
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + ++ +E+TFVAVL AC+ +V+ G E F + + + P ++HYGC+VD+L R
Sbjct: 371 KMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRG 430
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF L AC+IHG ++L+ + LL+ + + +V+LS
Sbjct: 431 GLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLS 490
Query: 109 NVH 111
N++
Sbjct: 491 NIY 493
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVV-PIMEHYGCVVDL 59
+ ++M G + + VT +++L+ACA + ++ G L L G F + P ++D+
Sbjct: 265 LFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDM 324
Query: 60 LGRAGLLSEANEFLW 74
+ G ++ A E W
Sbjct: 325 YAKCGSMTSALEVFW 339
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + G+R + +TF A+L+ C + LV G + F S+ ++ + P +EHY C+VDLL
Sbjct: 627 LFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLL 686
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G+AG L EA +F +W +AC++H +K++ + L L+P + YV
Sbjct: 687 GKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYV 746
Query: 106 VLSNVHT 112
++ N+++
Sbjct: 747 LMMNIYS 753
>gi|341606223|gb|AEK83214.1| At1g74600-like protein [Capsella grandiflora]
gi|399107060|gb|AFP20318.1| At1g74600-like protein, partial [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
+LSN+
Sbjct: 181 LLSNI 185
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ + V F+A + AC+ + +V+ GL F + ++ + P MEHY CVVDLL R+
Sbjct: 614 DMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARS 673
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL++A EF LW SAC+ G ++ V K++LEL + YV++S
Sbjct: 674 GLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVS 733
Query: 109 NVH 111
N++
Sbjct: 734 NIY 736
>gi|341606225|gb|AEK83215.1| At1g74600-like protein [Capsella grandiflora]
gi|341606229|gb|AEK83217.1| At1g74600-like protein [Capsella grandiflora]
gi|341606231|gb|AEK83218.1| At1g74600-like protein [Capsella grandiflora]
gi|341606233|gb|AEK83219.1| At1g74600-like protein [Capsella grandiflora]
gi|399107054|gb|AFP20315.1| At1g74600-like protein, partial [Capsella grandiflora]
gi|399107056|gb|AFP20316.1| At1g74600-like protein, partial [Capsella grandiflora]
gi|399107058|gb|AFP20317.1| At1g74600-like protein, partial [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
+LSN+
Sbjct: 181 LLSNI 185
>gi|341606135|gb|AEK83170.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGXKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 SLSNI 185
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM N VTFV+VL+AC+ + +E G F S+ ++ + P+ EHY C+VDLLGRA
Sbjct: 407 EMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRA 466
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA F+ W AC+IH +L+ EV K+LL L+ + YV+LS
Sbjct: 467 GKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLS 526
Query: 109 NVH 111
N++
Sbjct: 527 NIY 529
>gi|341606127|gb|AEK83166.1| At1g74600-like protein [Capsella grandiflora]
gi|341606129|gb|AEK83167.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGXKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 SLSNI 185
>gi|341606125|gb|AEK83165.1| At1g74600-like protein [Capsella grandiflora]
gi|341606133|gb|AEK83169.1| At1g74600-like protein [Capsella grandiflora]
gi|341606137|gb|AEK83171.1| At1g74600-like protein [Capsella grandiflora]
gi|341606179|gb|AEK83192.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGXKPDKVTFVGVLSACSHGGLVEEGYXHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 SLSNI 185
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R + +TFVAVL AC A LV +G+ F S++ +++V P +HY C+VDLLGRA
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + + S AC++H V+L+ ++LL+L ++ YV L+
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 109 NVH 111
N++
Sbjct: 495 NIY 497
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE G +S++ ++ + P HY C+VD LGR+G
Sbjct: 566 MKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 625
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L +ACKI+G V+L K+ +EL+P YV LSN
Sbjct: 626 RLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSN 685
Query: 110 V 110
+
Sbjct: 686 I 686
>gi|308081250|ref|NP_001182909.1| uncharacterized protein LOC100501193 [Zea mays]
gi|238008118|gb|ACR35094.1| unknown [Zea mays]
Length = 402
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M G+R N +TFV +LTAC+ A LV+ GL FHS+ + P EHY C++D+ GR
Sbjct: 251 DRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGR 310
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA +F L AC++ G +L + L++L P + ++ L
Sbjct: 311 AGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKELGEVAAQNLMKLDPNNTGIHISL 370
Query: 108 SNVHT 112
S ++T
Sbjct: 371 SGIYT 375
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 15/118 (12%)
Query: 10 LRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEA 69
++ N +TF+AVLTAC+ A LV+ G + F+S+ ++ VP +EH + D LGRAG L EA
Sbjct: 685 VKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEA 744
Query: 70 NEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVHT 112
F+ WS AC++H L+ EV K++ EL+P+ +V+LSN+++
Sbjct: 745 YNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYS 802
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E ++ + V+FV+VL+AC LVE G ++FHS+ ++ + P +EHY C+VDLLGRAG
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L E F+ W A C++H VKL L++L+P + +VVLS+
Sbjct: 785 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSS 844
Query: 110 VH 111
++
Sbjct: 845 IY 846
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +G + + VTF VLTAC+ L + GL + + E+ + MEHYGCVVDLLGR
Sbjct: 237 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 296
Query: 63 AGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA NE L + C++HG V ++ ++ + LLEL P YV+L
Sbjct: 297 SGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLL 356
Query: 108 SNVHT 112
SN++
Sbjct: 357 SNIYA 361
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + + + +TFVAVL AC A LV++G+ F S++ ++ V P +HY C+VDLL
Sbjct: 355 LFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLL 414
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG + EA + + S AC++H V+L+ ++LLEL P + YV
Sbjct: 415 GRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYV 474
Query: 106 VLSNVH 111
L+N++
Sbjct: 475 QLANIY 480
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +G + + VTF VLTAC+ L + GL + + E+ + MEHYGCVVDLLGR
Sbjct: 292 EAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGR 351
Query: 63 AGLLSEA-----------NEF----LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L EA NE L + C++HG V ++ ++ + LLEL P YV+L
Sbjct: 352 SGRLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLL 411
Query: 108 SNVHT 112
SN++
Sbjct: 412 SNIYA 416
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ + +TF A+L+AC + L+ G + F S++ ++ +VP +EHY C+VDLLGR
Sbjct: 631 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 690
Query: 63 AGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + +W A C+IH +K + K L +L+P + Y+++
Sbjct: 691 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILM 750
Query: 108 SNVHT 112
N+++
Sbjct: 751 MNLYS 755
>gi|404356831|gb|AFR63408.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE G +S++ ++ + P HY C+VD LGR+G
Sbjct: 70 MKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 129
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F+ W +ACKI+G V+L K+ +EL+P YV LSN
Sbjct: 130 RLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSN 189
Query: 110 V 110
+
Sbjct: 190 I 190
>gi|302794875|ref|XP_002979201.1| hypothetical protein SELMODRAFT_110409 [Selaginella moellendorffii]
gi|300152969|gb|EFJ19609.1| hypothetical protein SELMODRAFT_110409 [Selaginella moellendorffii]
Length = 429
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 17/125 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM +GL+ +++TFVA+L AC+ E G E F + +F + P EH+GCVVDLLGR+
Sbjct: 298 EMVVQGLQPSDITFVAILCACSHLGAWEKGHEHFRFMKWDFGIDPTAEHFGCVVDLLGRS 357
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQP-EHCRRYVVL 107
G + +A + W SACK+HG V+L+ + G EL+P +HC YV+L
Sbjct: 358 GRVKDAESLIESMPVYPGSVVWKVLLSACKLHGNVELAAKAGALASELEPYDHC-TYVML 416
Query: 108 SNVHT 112
SNV +
Sbjct: 417 SNVFS 421
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++GL + ++FV+VL AC+ A LVE G LF S++ ++ P +EHY C+VDLLGRA
Sbjct: 377 EMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRA 436
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
L EA + + W +C+IH V+L+ RL EL+P + YV+L+
Sbjct: 437 NRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLA 496
Query: 109 NVH 111
+++
Sbjct: 497 DIY 499
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+G +A+ VTF+A+++ACA A V+ GL LF + E+++ P MEH+ C+VDL RAG
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAG 701
Query: 65 LLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A E +W AC++H V+L+ + L +L P + YV++SN
Sbjct: 702 KLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761
Query: 110 VHT 112
++
Sbjct: 762 INA 764
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM + ++ N VTF+ VLTAC+ A +VE G ++F + + + P +HY C+VDLL
Sbjct: 369 LFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLL 428
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA+E L AC+IH + ++ L EL+P Y+
Sbjct: 429 GRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYI 488
Query: 106 VLSNVH 111
+L+N++
Sbjct: 489 LLANIY 494
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G + + +T + VL+AC A VE G F S+ +F V P+ +HY C+VDLLGRA
Sbjct: 483 EMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W +ACK+H + L V ++L E++ + YV+LS
Sbjct: 543 GFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLS 602
Query: 109 NVHT 112
N++
Sbjct: 603 NMYA 606
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M ++ NE+TFVA+L+AC LVE+G F + ++ + P ++HYGC++DLL
Sbjct: 359 MFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLL 418
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E +W +A +IHG +L + + L++++P + Y
Sbjct: 419 GRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYT 478
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 479 LLSNIYA 485
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G + + +TFVA+L+AC LVELG F S+ ++ + P ++HY C++DL
Sbjct: 900 LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L +A EF+ W +AC+I+G +L+ + LL ++ E+ RYV
Sbjct: 960 GRANQLDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYV 1019
Query: 106 VLSNVH 111
L+NV+
Sbjct: 1020 QLANVY 1025
>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
Length = 564
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D M G+R N +TFV +LTAC+ A LV+ GL FHS+ + P EHY C++D+ GR
Sbjct: 413 DRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGR 472
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA +F L AC++ G +L + L++L P + ++ L
Sbjct: 473 AGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKELGEVAAQNLMKLDPNNTGIHISL 532
Query: 108 SNVHT 112
S ++T
Sbjct: 533 SGIYT 537
>gi|404356761|gb|AFR63373.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356767|gb|AFR63376.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356771|gb|AFR63378.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356775|gb|AFR63380.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356779|gb|AFR63382.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356803|gb|AFR63394.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356805|gb|AFR63395.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356807|gb|AFR63396.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356811|gb|AFR63398.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356829|gb|AFR63407.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE G +S++ ++ + P HY C+VD LGR+G
Sbjct: 70 MKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 129
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F+ W +ACKI+G V+L K+ +EL+P YV LSN
Sbjct: 130 RLREAENFINTRPIKSDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSN 189
Query: 110 V 110
+
Sbjct: 190 I 190
>gi|404356377|gb|AFR63181.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356381|gb|AFR63183.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356385|gb|AFR63185.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356397|gb|AFR63191.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356409|gb|AFR63197.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356487|gb|AFR63236.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356489|gb|AFR63237.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356491|gb|AFR63238.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356493|gb|AFR63239.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356495|gb|AFR63240.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356497|gb|AFR63241.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356499|gb|AFR63242.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356501|gb|AFR63243.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356503|gb|AFR63244.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356505|gb|AFR63245.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356507|gb|AFR63246.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356509|gb|AFR63247.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356511|gb|AFR63248.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356513|gb|AFR63249.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356515|gb|AFR63250.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356517|gb|AFR63251.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356519|gb|AFR63252.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356521|gb|AFR63253.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356523|gb|AFR63254.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356525|gb|AFR63255.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356527|gb|AFR63256.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356529|gb|AFR63257.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356531|gb|AFR63258.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356533|gb|AFR63259.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356535|gb|AFR63260.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356537|gb|AFR63261.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356539|gb|AFR63262.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356541|gb|AFR63263.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356543|gb|AFR63264.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356545|gb|AFR63265.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356547|gb|AFR63266.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356549|gb|AFR63267.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356679|gb|AFR63332.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356681|gb|AFR63333.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356683|gb|AFR63334.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356685|gb|AFR63335.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356687|gb|AFR63336.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356689|gb|AFR63337.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356691|gb|AFR63338.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356693|gb|AFR63339.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356695|gb|AFR63340.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356697|gb|AFR63341.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356699|gb|AFR63342.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356701|gb|AFR63343.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356703|gb|AFR63344.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356705|gb|AFR63345.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356707|gb|AFR63346.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356709|gb|AFR63347.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356711|gb|AFR63348.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356713|gb|AFR63349.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356715|gb|AFR63350.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356717|gb|AFR63351.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356719|gb|AFR63352.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356721|gb|AFR63353.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356723|gb|AFR63354.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356725|gb|AFR63355.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356727|gb|AFR63356.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356729|gb|AFR63357.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356731|gb|AFR63358.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356733|gb|AFR63359.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356735|gb|AFR63360.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356737|gb|AFR63361.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356739|gb|AFR63362.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356741|gb|AFR63363.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356743|gb|AFR63364.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356745|gb|AFR63365.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356747|gb|AFR63366.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356749|gb|AFR63367.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356751|gb|AFR63368.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356753|gb|AFR63369.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356755|gb|AFR63370.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356757|gb|AFR63371.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. lyrata]
gi|404356759|gb|AFR63372.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356791|gb|AFR63388.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356823|gb|AFR63404.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356827|gb|AFR63406.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE G +S++ ++ + P HY C+VD LGR+G
Sbjct: 70 MKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 129
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F+ W +ACKI+G V+L K+ +EL+P YV LSN
Sbjct: 130 RLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSN 189
Query: 110 V 110
+
Sbjct: 190 I 190
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M G++ +E+T V VL+AC+ L++ G E F+S+ ++ V+P +HY C++DLLGR
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA + L A +IHG +L + + + +++P++ YV+L
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLL 603
Query: 108 SNVH 111
SN++
Sbjct: 604 SNLY 607
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 29 LVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEANEFLWSACKIHGAVKLSHE 88
L++ G E F+ + E+ V P +HY C++DLLGR L E L A +IHG +L +
Sbjct: 779 LLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGA--LLGASRIHGNTELGEK 836
Query: 89 VGKRLLELQPEH 100
+ ++ P++
Sbjct: 837 AAQMFFKMGPQN 848
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M ++G+ TFV VL ACA LV+ G+E F S+ + + P M+HYGCVVDLL R
Sbjct: 395 DQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCR 454
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
+G L A F L SACK+HG + L+ V K+LL L P + YV+
Sbjct: 455 SGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLS 514
Query: 108 SNVH 111
S+ +
Sbjct: 515 SSTY 518
>gi|296088347|emb|CBI36792.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM +G+ +VTF+++L ACA LVE G+ S+ ++ + P MEHY CVVD++
Sbjct: 28 LYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMM 87
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL+EA +F+ W AC IHG ++ +L PE Y+
Sbjct: 88 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYI 147
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 148 LLANIYS 154
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M M ++ NE+TFVA+L+AC LVE+G F + ++ + P ++HYGC++DLL
Sbjct: 359 MFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLL 418
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E +W +A +IHG +L + + L++++P + Y
Sbjct: 419 GRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYT 478
Query: 106 VLSNVHT 112
+LSN++
Sbjct: 479 LLSNIYA 485
>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +G+ + V V VL+AC+ A L + G F ++ +++ P +EHY C+VDLL
Sbjct: 770 LFERMVSEGIHPDNVAMVGVLSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLL 829
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E + S ACKIH V++ E R++EL+P + YV
Sbjct: 830 GRAGRLEEARELISSMPMPADGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYV 889
Query: 106 VLSNVHT 112
++SN++T
Sbjct: 890 LMSNIYT 896
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G + VT + VL+AC LVE G F ++ ++ + P +EHYGC+VDLLGR
Sbjct: 487 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 546
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA NE +W SAC++H V+ + L LQP Y VLS
Sbjct: 547 GLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLS 606
Query: 109 NVH 111
N++
Sbjct: 607 NIY 609
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G + + + F+++L+AC+ A LV+ G F S+ ++ + P MEHYGC+VD+L RA
Sbjct: 373 QMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHIXPWMEHYGCMVDILCRA 432
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA +F L AC G + L+++V L EL P+ YV+LS
Sbjct: 433 GLVDEAFKFVQNMPIKPDMIVWRTLLGACXXQGNISLANQVMNXLCELGPKKSEDYVLLS 492
Query: 109 NV 110
N+
Sbjct: 493 NL 494
>gi|302793933|ref|XP_002978731.1| hypothetical protein SELMODRAFT_109195 [Selaginella moellendorffii]
gi|300153540|gb|EFJ20178.1| hypothetical protein SELMODRAFT_109195 [Selaginella moellendorffii]
Length = 348
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
E+ +G A+ TF + L AC+ ++ LE+F S++G+++ VP +HYGCV+DLLGR
Sbjct: 222 ELSLEGFAADNFTFTSTLFACSHGGFLKESLEVFASMVGDYQAVPSPQHYGCVLDLLGRM 281
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA E + W AC H + + L+ELQPE YVV +
Sbjct: 282 GKLGEAEELIGDMPLEPDSVAWMSLLGACSTHSDATKASGLADSLVELQPEKAAHYVVFT 341
Query: 109 NVHT 112
NV T
Sbjct: 342 NVAT 345
>gi|404356401|gb|AFR63193.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
gi|404356425|gb|AFR63205.1| pentatricopeptide repeat-containing protein, partial [Arabidopsis
lyrata subsp. petraea]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE G +S++ ++ + P HY C+VD LGR+G
Sbjct: 70 MKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 129
Query: 65 LLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F+ W +ACKI+G V+L K+ +EL+P YV LSN
Sbjct: 130 RLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSN 189
Query: 110 V 110
+
Sbjct: 190 I 190
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + + + +TFV VLTAC+ A LV+ GL+ + +++ + + +HY CVVD+LGR
Sbjct: 366 ERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGR 425
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA E L SACK HG V+++ V +L EL+P + Y++L
Sbjct: 426 AGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYIML 485
Query: 108 SNVHT 112
SN++
Sbjct: 486 SNIYA 490
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G+ + V F+A + AC+ + +V+ GL F + ++ + P MEHY CVVDLL R+
Sbjct: 614 DMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARS 673
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL++A EF LW SAC+ G ++ V K++LEL + YV++S
Sbjct: 674 GLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVS 733
Query: 109 NVH 111
N++
Sbjct: 734 NIY 736
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M GL+ + VTF+ VL+AC+RA LVE G + F S+ + +VPI +HY C++DL
Sbjct: 467 LFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLY 526
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G EA EF L S+C++ G +++ + LLE P++ YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 106 VLSNVH 111
+L ++H
Sbjct: 587 LLCSMH 592
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M +M G++ N+VT++AVL+AC+ LV+ G E F S+ + ++P MEHY C+VDLL
Sbjct: 534 MFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLL 593
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+GL+ EA +F+ W SAC+ +G ++ ++ L+P YV
Sbjct: 594 ARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYV 653
Query: 106 VLSNVH 111
+LSN++
Sbjct: 654 LLSNLY 659
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 15/121 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
+ ++ N VTFV LTAC+ + LV+ G ++F S+ F V P +HY C+VDLLGRAG L
Sbjct: 379 QTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRL 438
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
EA E L AC+IH ++ + L EL+P+ Y++LSNV+
Sbjct: 439 QEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVY 498
Query: 112 T 112
+
Sbjct: 499 S 499
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEK-GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ EM EK G+R +++TF+ ++++C V+ G+ F S+ ++ + P EHY CVVDL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 60 LGRAGLLSEANE---------------FLWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L+EA E L AC++H V+L+ +L++L P + Y
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 105 VVLSNVH 111
V++SN H
Sbjct: 750 VLISNAH 756
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M + G+ + V+++AVL+AC+ LV+ G + F ++ + + P HY C+VDLL
Sbjct: 603 LFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLL 661
Query: 61 GRAGLLSE-----------ANEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSE AN +W A C+IHG ++L+ + L EL+PEH Y
Sbjct: 662 GRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYT 721
Query: 106 VLSNVHT 112
+L N+++
Sbjct: 722 LLRNMYS 728
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G+R N VTF VL+ C+ +RLV+ GL +F S+ + V P +H+ C+VD+L RA
Sbjct: 406 EMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRA 465
Query: 64 GLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA EF+ W A C+++ V+L RL E++ ++ YV+LS
Sbjct: 466 GRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLS 525
Query: 109 NV 110
N+
Sbjct: 526 NI 527
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M + + + +TFV VLTAC+ A LV+ GL+ + +++ + + +HY CVVD+LGR
Sbjct: 366 ERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGR 425
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA E L SACK HG V+++ V +L EL+P + Y++L
Sbjct: 426 AGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYIML 485
Query: 108 SNVHT 112
SN++
Sbjct: 486 SNIYA 490
>gi|341606215|gb|AEK83210.1| At1g74600-like protein [Capsella grandiflora]
gi|341606217|gb|AEK83211.1| At1g74600-like protein [Capsella grandiflora]
gi|341606227|gb|AEK83216.1| At1g74600-like protein [Capsella grandiflora]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M EKG + ++VTFV VL+AC+ LVE G S++ ++ + P HY C+VD L
Sbjct: 61 MYNLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLKSMVKDYGIEPENRHYVCMVDTL 120
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR+G L EA F+ W SAC++HG V+L K +EL+P Y+
Sbjct: 121 GRSGRLREAESFINSMPIKPDALVWGTLLSACRLHGDVELGKLAAKMAIELEPSDAGAYI 180
Query: 106 VLSNV 110
LSN+
Sbjct: 181 XLSNI 185
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 15/120 (12%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLL 66
E GL+ +++TF+ VL+AC A LV+ G F+SL EF+++P +EHY C+VDLL R+G L
Sbjct: 426 EDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHL 485
Query: 67 SEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E +F L +AC+ V++ V R+++L+P + YVV S ++
Sbjct: 486 EEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIY 545
>gi|449446907|ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 456
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 14/125 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M E+G++ N++ F+ VL ACA A L+E G + F + F + P HY C+VDLL
Sbjct: 298 LFSKMEEEGIKPNQICFIGVLNACAHAGLIEQGCKYFELMRKGFGIEPQKGHYACMVDLL 357
Query: 61 GRAG-------LLSEANEF-------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
GRAG ++ A E L ACKIHG +++ K L E++PE+ YV+
Sbjct: 358 GRAGEVEMAYNVIKGAREIDAKTWGSLLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVL 417
Query: 107 LSNVH 111
L+N +
Sbjct: 418 LANTY 422
>gi|115486591|ref|NP_001068439.1| Os11g0673000 [Oryza sativa Japonica Group]
gi|77552474|gb|ABA95271.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113645661|dbj|BAF28802.1| Os11g0673000 [Oryza sativa Japonica Group]
Length = 515
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G NEVTF+ VL CA A V++G ++F S+ E + P++EHYGC+VDL GR+
Sbjct: 353 EMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYGCMVDLFGRS 412
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA N +W SAC H + ++ K L+ L+P + YV+L+
Sbjct: 413 GLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLEPWNSGNYVLLA 472
Query: 109 NVHT 112
N++
Sbjct: 473 NLYA 476
>gi|295828400|gb|ADG37869.1| AT1G13410-like protein [Neslia paniculata]
Length = 185
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+R ++VTFV VL AC LVE GL F S+ +F + P +EH GCVVDLL RA
Sbjct: 57 EMKNCGIRPDKVTFVGVLCACKHMGLVEDGLAYFSSMFTDFSITPQIEHCGCVVDLLSRA 116
Query: 64 GLLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L++A EF +W+ A K++ V + L++L+P + +V+LS
Sbjct: 117 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGELALVELIKLEPRNPANFVMLS 176
Query: 109 NVH 111
N++
Sbjct: 177 NIY 179
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E+ ++ NE+TFVA+LTAC A LV+ G+ F + V P +EH C+VDLL ++
Sbjct: 408 EMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKS 467
Query: 64 GLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA +F +W SAC+ H V+L+ +LL L+P++ YV+LS
Sbjct: 468 GRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLS 527
Query: 109 NVH 111
N++
Sbjct: 528 NIY 530
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E+G +A+ VTF+A+++ACA A V+ GL LF + E+++ P MEH+ C+VDL RAG
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAG 701
Query: 65 LLSEANEF-----------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A E +W AC++H V+L+ + L +L P + YV++SN
Sbjct: 702 KLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761
Query: 110 VHT 112
++
Sbjct: 762 INA 764
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +G+ N++TF ++L+AC+ A L++ G + F + + V P M+HY C+VD+L
Sbjct: 424 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDML 482
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA ++ +W A C+IHG +L L +L+PEH YV
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYV 542
Query: 106 VLSNVH 111
++SN++
Sbjct: 543 LMSNIY 548
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 16/128 (12%)
Query: 1 MVDEMYE-KGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ D+M + +G + + +TF AVLTAC+ A +VE G LF + ++++VP +EHY C+VDL
Sbjct: 269 LFDQMEKSEGNKLDHLTFTAVLTACSHAGMVEHGQSLFLLMQQKYKIVPRLEHYACMVDL 328
Query: 60 LGRAGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
LGRAG L+EA + F+W AC+ HG + L+ + L EL+PE+
Sbjct: 329 LGRAGNLNEAYDMIKKMPVKPDLFVWGALLGACRNHGDIGLAEVAARHLAELEPENAGNN 388
Query: 105 VVLSNVHT 112
+++SN++
Sbjct: 389 MLMSNLYA 396
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M ++G + VT + VL+AC LVE G F ++ ++ + P +EHYGC+VDLLGR
Sbjct: 415 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 474
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GL+ EA NE +W SAC++H V+ + L LQP Y VLS
Sbjct: 475 GLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLS 534
Query: 109 NVHT 112
N++
Sbjct: 535 NIYA 538
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM ++ +E+T ++VL AC+ + L+E G LF+ + ++ + P +EH+ C+VDLL
Sbjct: 569 LFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLL 628
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG LSEA F LW CK+HG + K LL+L PE Y+
Sbjct: 629 GRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYI 688
Query: 106 VLSNVH 111
++SN++
Sbjct: 689 LVSNLY 694
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G + + +TFVA+L+AC LVELG F S+ ++ + P ++HY C++DL
Sbjct: 900 LFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLY 959
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L +A EF+ W +AC+I+G +L+ + LL ++ E+ RYV
Sbjct: 960 GRANQLDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYV 1019
Query: 106 VLSNVH 111
L+NV+
Sbjct: 1020 QLANVY 1025
>gi|296086392|emb|CBI31981.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G R NEVTF+AVL AC+ +V G+ ++ E+ P +EHYGC++DLLGRAG
Sbjct: 383 MEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLLGRAG 442
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA+ L +AC+++G V L V + LLE+ EH ++LS+
Sbjct: 443 LLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSILLSS 502
Query: 110 VH 111
+
Sbjct: 503 TY 504
>gi|218196813|gb|EEC79240.1| hypothetical protein OsI_19991 [Oryza sativa Indica Group]
Length = 507
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M G + N+VTFV ++ AC+ A LV+ G +LF S+ E+ + P ++HY C +DLL
Sbjct: 282 LYDRMVLAGAKPNKVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPGLQHYTCYLDLL 341
Query: 61 GRAGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R+G L EA E + W SACK + ++ + +LLEL+P+ Y+
Sbjct: 342 SRSGHLLEAEELMTTMPYEPDEATWGALLSACKKYKDAEMCIRIADKLLELRPKDSSTYI 401
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 402 LLSNVY 407
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M +G+ N++TF ++L+AC+ A L++ G + F + + V P M+HY C+VD+L
Sbjct: 393 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDML 451
Query: 61 GRAGLLSEA-----------NEFLWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA ++ +W A C+IHG +L L +L+PEH YV
Sbjct: 452 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYV 511
Query: 106 VLSNVH 111
++SN++
Sbjct: 512 LMSNIY 517
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 17/125 (13%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM ++G++ + VTF AVL ACA +V+ E+F S+ ++ + P++EHY CVV LG+A
Sbjct: 451 EMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKA 510
Query: 64 GLLSEANEF-----------LWSACKIHGA-----VKLSHEVGKRLLELQPEHCRRYVVL 107
LSEA EF +W A +HGA V+L V L E++PE+ YV++
Sbjct: 511 RRLSEAKEFVSKMPIEPSAKVWGAL-LHGASISSDVELGKSVCDYLFEIEPENTGNYVIM 569
Query: 108 SNVHT 112
+N+++
Sbjct: 570 ANLYS 574
>gi|29893615|gb|AAP06869.1| chloroplast import-associated channel protein homolog [Oryza sativa
Japonica Group]
Length = 1273
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D M G + + +TF AVLTAC+ +VE+G L+ ++ E+ V P +EHY C+V LL
Sbjct: 1114 LFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYRAMQVEYGVEPRLEHYACMVHLL 1173
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA + F+W AC+ HG ++L+ RLL ++P++ +
Sbjct: 1174 GRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAVEPDNAASCL 1233
Query: 106 VLSN 109
+LS+
Sbjct: 1234 LLSS 1237
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,648,767,647
Number of Sequences: 23463169
Number of extensions: 57516104
Number of successful extensions: 186629
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5406
Number of HSP's successfully gapped in prelim test: 580
Number of HSP's that attempted gapping in prelim test: 170300
Number of HSP's gapped (non-prelim): 11897
length of query: 112
length of database: 8,064,228,071
effective HSP length: 80
effective length of query: 32
effective length of database: 6,187,174,551
effective search space: 197989585632
effective search space used: 197989585632
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)