BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033770
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY75|PPR30_ARATH Putative pentatricopeptide repeat-containing protein At1g10330
OS=Arabidopsis thaliana GN=PCMP-E71 PE=3 SV=1
Length = 467
Score = 119 bits (297), Expect = 7e-27, Method: Composition-based stats.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 15/123 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + N +T +A+LTACAR++LV+LG++LF S+ E++++P EHYGCVVDL+
Sbjct: 311 MFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLI 370
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL +A F+ S ACKIH +L + VGK+L+ LQP+HC +YV
Sbjct: 371 GRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYV 430
Query: 106 VLS 108
LS
Sbjct: 431 ALS 433
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + G++ N +TF AVLTAC+ LVE G +F+S+ ++ + P +EHYGC+VDLLGRA
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA F L AC+IH ++L E+G+ L+ + P H RYV +
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Query: 109 NVH 111
N+H
Sbjct: 458 NIH 460
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 103 bits (257), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M +G R N+VT VA+L AC+ L+++GLE+F+S+ F V P +EHYGC+VDLLGR
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA F L SACKIHG ++L ++ KRL E + YV+LS
Sbjct: 406 GRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLS 465
Query: 109 NVH 111
N++
Sbjct: 466 NLY 468
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYG-CVVDLLGR 62
EM + + ANE T V VL+AC+ +ELG HS + E + + + G ++++ R
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELG-RWVHSFV-ENQRMELSNFVGNALINMYSR 302
Query: 63 AGLLSEA 69
G ++EA
Sbjct: 303 CGDINEA 309
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M ++ + NEVTFV VL C+ + LVE G ++F S+ E+ + P +EHYGC+VDL GRA
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA N +W SAC+IHG ++L KR+LEL+P+H V++SN
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 110 VH 111
++
Sbjct: 556 IY 557
>sp|Q9LJ69|PP243_ARATH Pentatricopeptide repeat-containing protein At3g18970
OS=Arabidopsis thaliana GN=PCMP-E93 PE=2 SV=1
Length = 472
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 22/132 (16%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+++ M E G++ NE+TF ++L+A LVE G+ELF S+ F V P++EHYGC+VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPE------ 99
G+AG + EA +F L +AC I+G + E+GK LLE++ E
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 100 -HCRRYVVLSNV 110
C YV LSNV
Sbjct: 430 SECEDYVALSNV 441
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHY--GCVVDLLGRAGLL 66
G+R + T V VL+A ++ L+E+G L H + + P ++ + +VD+ + G L
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIG-SLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCL 273
Query: 67 SEA----------NEFLWSA 76
+ A N F W++
Sbjct: 274 NNAFSVFELMKVKNVFTWTS 293
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M E+GL+ + V FV LTAC+ LV+ G E+F+S+L V P HYGC+VDLL
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA N+ +W +AC++ G V+++ +++ L PE YV
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYV 677
Query: 106 VLSNVH 111
+LSNV+
Sbjct: 678 LLSNVY 683
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 16/121 (13%)
Query: 7 EKGLRANEVTFVAVLTACARARLVELGLELFHSLL-GEFEVVPIMEHYGCVVDLLGRAGL 65
EK ++ + VT +AVL+ C+ R+ + GL +F ++ GE+ P EHYGC+VD+LGRAG
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 66 LSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
+ EA EF L AC++H +V + VG+RL+E++PE+ YV+LSN+
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 111 H 111
+
Sbjct: 469 Y 469
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + NE TF VLT+C RA + LG ++ H L+ ++ + ++D+ +A
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 64 GLLSEANEFL 73
G + EA E
Sbjct: 202 GQIKEAREIF 211
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G +VTF AVL+AC+ LVE GLE++ ++ + + P +EHYGC+VD+LGRA
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA F L ACKI+ +++ VG L++++PEH YV+LS
Sbjct: 400 GKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLS 459
Query: 109 NVH 111
N++
Sbjct: 460 NIY 462
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G++ NEVT+VA+L+AC+ LV G F+S+ + ++ P MEHY C+VDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL++A EF+ W AC++H +L +++LEL P Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 108 SNVH 111
SN++
Sbjct: 684 SNIY 687
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 VDEMYEKGLRA-NEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+D M G+R + VTF ++L +C RAR LG +L H+ L EF++ P Y ++ L
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG-KLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 61 GRAGLLSEANE 71
++G ++A +
Sbjct: 108 SKSGDSAKAED 118
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M ++G+R + FV VL+AC+ + L + GLELF ++ E+++ P EHY C+VDLL
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA EF+ S ACKIH V ++ +++E +P + YV
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYV 464
Query: 106 VLSNVHT 112
++SN+++
Sbjct: 465 LMSNIYS 471
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + + N VTFV++L+AC+ + V+ G + F S+ ++ VVP EHY C+VDLLGRA
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + EA F+ W SAC+IH V L+ E+ ++LL ++PE YV+LS
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLS 522
Query: 109 NVH 111
N++
Sbjct: 523 NIY 525
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
D+M +R N VT V VL+AC+ LV+ G+ F S+ E+ + P EHY CVVD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLLS A EF L SAC +H +++ LLEL+PE YV+L
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 108 SNVH 111
SN++
Sbjct: 902 SNLY 905
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM E G + + +T + VL+AC A VE G F S+ +F V P+ +HY C+VDLLGRA
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + +W +ACK+H + L V ++LLE++P + YV+LS
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 602
Query: 109 NVH 111
N++
Sbjct: 603 NMY 605
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + +EV F+AVLTAC + V+LGL F S+ ++ + P ++HY VVDLLGRA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L+EA+E L+ ACK H + + V + LLEL PE C Y+ L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 109 NVH 111
H
Sbjct: 504 KTH 506
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLL 41
EM EKGL+ NE T AVL+AC+++ + G+ + +L
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 92.0 bits (227), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 15/116 (12%)
Query: 11 RANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSEAN 70
+ NEVTFVA L+AC+ A +VE GL+++ S+ F V PI HY C+VD+LGRAG +EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 71 EF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
E L AC+ H + ++ K+L+E++PE+ Y++LSN++
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMY 545
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + G+R N+VTF+A+L+AC+ V+LG LF+S+ ++ + P +EHYGC++DLL
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA+E +W +A +H ++L L++L+P + Y+
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYM 457
Query: 106 VLSNVHT 112
+L+N+++
Sbjct: 458 LLANLYS 464
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + G+R N +TFV+VL AC+ A L G F+++ G F V P +EHYGC+VDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 65 LLSEA-----------NEFLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L +A + +WS AC+IH V+L+ RL EL +C Y++LS+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498
Query: 110 VH 111
++
Sbjct: 499 IY 500
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M D M G + + VAVL+AC+ A LVE G E+F+S+ F + P EHY C+VDLL
Sbjct: 522 MFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLL 581
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GR G L EA+E L ++C++H V ++ + +L L+PE Y+
Sbjct: 582 GRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYM 641
Query: 106 VLSNVHT 112
+LSN+++
Sbjct: 642 LLSNIYS 648
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G N+VT +A+LTAC+ A +E GLE+F S+ +F V P +EHY C VD+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G + +A E + S ACK H + L+ K+L E +P++ YV+LS
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 109 NVH 111
+++
Sbjct: 542 SIN 544
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ + M +GLR + +T+V V +AC A LV G + F + +++P + HY C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAGLL EA EF L SAC++H + L +RLL L+PE+ Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 106 VLSNVHT 112
L+N+++
Sbjct: 622 ALANLYS 628
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G+R ++VTF+AVL +C A L++ G++ F+S+ +++VP +EHYGC+VDLLGR G
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVG 466
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W AC++H V ++ EV L++L P Y +LSN
Sbjct: 467 RLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 110 VHT 112
++
Sbjct: 527 IYA 529
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+VD+M GL+ + +++L AC + L+ LG+ + HS+L + ++D+
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMY 360
Query: 61 GRAGLLSEA 69
+ G L +A
Sbjct: 361 AKCGNLKKA 369
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM ++G++ + +TFV +L+AC+ + LV+ G F + ++ + P ++HYGC+VD+
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L A +F L SAC++HG V L + L E++PEH +V
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 106 VLSNVH 111
+LSN++
Sbjct: 659 LLSNMY 664
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 1 MVDEMYEKG-LRANEVTFVAVLTACARARLVELGLELFHSLLGE------FEVVPIMEHY 53
M + M E+G + AN+ T+V+VL AC++A + G++L LL F V + + Y
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 54 G-C--VVDLLGRAGLLSEANEFLWS---ACK-IHGAVKLSHEVGKRLLE--LQPEHCRRY 104
G C + D L + N W+ AC HG + + + K +L+ ++P+H
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 105 VVLS 108
+LS
Sbjct: 557 TLLS 560
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M + NEVTF+AVL+ACA LVE G LF S+ G F + P +HY C+VDL GR G
Sbjct: 398 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 457
Query: 65 LLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
LL EA + W A C +H +L R+++LQP H RY +L+N
Sbjct: 458 LLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLAN 517
Query: 110 VHT 112
+++
Sbjct: 518 LYS 520
>sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protein At4g16470
OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2
Length = 501
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
++M E+G R N VTF+ VLTAC LV+ G E F+S+ ++ + P +HY +VD LGR
Sbjct: 299 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
Query: 63 AGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AG L EA EF L AC+IHG VKL + LEL P + YVV
Sbjct: 359 AGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVF 418
Query: 108 SN 109
+N
Sbjct: 419 AN 420
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M G + + +TFV+VLTAC+ + LVE GLE+ S+ + P ++HY C+VD LGRA
Sbjct: 610 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 64 GLLSEAN---------------EFLWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L +A E L S+C++HG V L+ V ++L+ L P+ YV+LS
Sbjct: 670 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 109 NVHT 112
N ++
Sbjct: 730 NTYS 733
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSL 40
M + G + NEVT ++VL AC R+ VE G +F S+
Sbjct: 341 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M G++ +E+TFV +L AC+ + + G + + ++P +HY CV+D+LGRA
Sbjct: 459 MCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRAD 518
Query: 65 LLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA N +W S+C++HG L+ GKRL EL+PEHC YV++SN
Sbjct: 519 KLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSN 578
Query: 110 VH 111
V+
Sbjct: 579 VY 580
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 18/121 (14%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
G N VTFVAVL+ACA A LVE G ++ + + ++P +EH+ C+VD+LGRAG L E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 69 ANEF--------------LWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNV 110
A +F LW+ ACK+H L E+ KRL+ L+P++ +V+LSN+
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Query: 111 H 111
+
Sbjct: 425 Y 425
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGE 43
+M E G + TFV++L+ACA+ V LG + ++ E
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
>sp|Q9FGR2|PP436_ARATH Pentatricopeptide repeat-containing protein At5g59600
OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1
Length = 534
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ D+M G + + +TF A+LTAC+ A L +LG LF + ++ +VP +EHY C+VDLL
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435
Query: 61 GRAGLLSEANE-----------FLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA E F+W +AC+ HG ++L+ K L EL+PE+ +
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGL 495
Query: 106 VLSNVH 111
+L++++
Sbjct: 496 LLTSLY 501
>sp|Q9CA73|PP119_ARATH Putative pentatricopeptide repeat-containing protein At1g74400
OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1
Length = 462
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 2 VDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLG 61
+D+ + + N+VTF+ VL AC+ + LVE G F S++ ++ + P H+GC+VDL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 62 RAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVV 106
R+G L +A+EF L AC +HG V+L EV +R+ EL +H YV
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 107 LSNVH 111
LSN++
Sbjct: 384 LSNIY 388
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ VTF+ VL AC+ A LV+ G E+F+S++ + P ++HY C+VD+LGRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L A +F L AC+IH L+ V ++L EL P++ +V+LS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 109 NVHT 112
N+H+
Sbjct: 631 NIHS 634
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M E G+ + +TFVA+L+ C+ L E GL LF + EF V P +EHY C+VD+LGRAG
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
+ EA + L ++C++HG V + K L L+P + YV++SN
Sbjct: 489 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 548
Query: 110 VH 111
++
Sbjct: 549 IY 550
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ ++M + G+ A+E++FV++L AC+ + LV+ G F+ + E ++ P +EHY C+VD+L
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 61 GRAGLLSEANEF-----------LWSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
R G L +A F +W A C+IH VKL+ +V +++ EL+PE+ YV
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 706
Query: 106 VLSNVHT 112
+++N++
Sbjct: 707 LMANIYA 713
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM E+G+ + T AVL CAR RL++ G + H + E ++ + ++D+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMY 442
Query: 61 GRAGLLSEANEFLWSACKIHGAVKLSHEVG 90
+ G + EA E ++S ++ + + +G
Sbjct: 443 AKCGSMQEA-ELVFSEMRVKDIISWNTIIG 471
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G+ N VTFV VLTAC+ LVE GL+L+ ++ E + P EH CVVDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L+EA F L SACK G V L+ + + +L++ P + +V
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 106 VLSNVH 111
+L ++H
Sbjct: 681 LLCSMH 686
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 79/126 (62%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G++ +++TFV +L+AC+ + +++LG +F ++ ++++ P +EHYGC++DLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 61 GRAGLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
G +GL EA + +W ACK+HG V+L + L++++PE+ YV
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 106 VLSNVH 111
+LSN++
Sbjct: 577 LLSNIY 582
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +M + +R +E T V V++ACA++ +ELG ++ H + + ++ ++DL
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLY 311
Query: 61 GRAGLLSEA 69
+ G L A
Sbjct: 312 SKCGELETA 320
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+ M +GL+ ++ T VAVL+AC+ LV+ G + F+++ ++ V+P +HY C+VDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 63 AGLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL +A+ + W A ++HG +L+ ++ ++PE+ YV+L
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 108 SNVH 111
SN++
Sbjct: 619 SNLY 622
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM G++ + VT VAVL+AC+ ++LV G LF + E+ + P ++H+ C+VDL
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L++A + L +AC IHG ++ ++LLE++PE+ YV
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 106 VLSNVH 111
+++N++
Sbjct: 590 LIANMY 595
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +EV ++AVL+AC+ + +++ G ELF LL + P +EHY CVVDLLGRA
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 64 GLLSEA-----------NEFLW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA N +W S C++HG ++L EVGK LL + ++ YV++S
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 109 NVH 111
N++
Sbjct: 524 NLY 526
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM +G+ NE TF L AC +E GL++ H + ++E +VD+
Sbjct: 94 LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI-HGFCLKIGFEMMVEVGNSLVDMY 152
Query: 61 GRAGLLSEANE 71
+ G ++EA +
Sbjct: 153 SKCGRINEAEK 163
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 15/121 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M EKG + ++VTFV VL+AC+ LVE +S++ ++ + P HY C+VD LGR+G
Sbjct: 744 MKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSG 803
Query: 65 LLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSN 109
L EA F L +ACKIHG V+L K+ +EL+P Y+ LSN
Sbjct: 804 RLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSN 863
Query: 110 V 110
+
Sbjct: 864 I 864
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 28/106 (26%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ EM + G +E T AVLT C+ + G E+ L
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL------------------- 578
Query: 61 GRAGL-----LSEANEFLWSACKIHGAVKLSHEVGKRLLELQPEHC 101
RAG+ L A ++S C G++KL+ +V RL EL P C
Sbjct: 579 -RAGIDKGMDLGSALVNMYSKC---GSLKLARQVYDRLPELDPVSC 620
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM + +R + +TFVAVL AC A LV +G+ F S++ +++V P +HY C+VDLLGRA
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 64 GLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + + S AC++H V+L+ ++LL+L ++ YV L+
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 109 NVH 111
N++
Sbjct: 495 NIY 497
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEK-GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDL 59
+ EM EK G+R +++TF+ ++++C V+ G+ F S+ ++ + P EHY CVVDL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 60 LGRAGLLSEANE---------------FLWSACKIHGAVKLSHEVGKRLLELQPEHCRRY 104
GRAG L+EA E L AC++H V+L+ +L++L P + Y
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 105 VVLSNVH 111
V++SN H
Sbjct: 750 VLISNAH 756
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 9 GLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAGLLSE 68
GL+ ++TF+ L ACA A LV G+ +F S+ E+ + P +EHYGC+V LLGRAG L
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 69 ANE-----------FLWS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLSNVH 111
A E LWS +CK+HG L E+ + L+ L ++ YV+LSN++
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIY 473
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM G+ NE+TF + L AC+ + LVE GL LF +L ++ + HY C+VDLLGRA
Sbjct: 515 EMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRA 574
Query: 64 GLLSEANEFL-----------W----SACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
G L EA + W +AC H V+L +L EL+PE+ YV+L+
Sbjct: 575 GRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634
Query: 109 NVH 111
N++
Sbjct: 635 NIY 637
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
+M + G+R ++V ++ +LTAC+ LVE G F ++ + P +EHYGC+VDLLGR+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 64 GLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
GLL EA EF L AC++ G V++ V L+++ P YV LS
Sbjct: 425 GLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALS 484
Query: 109 NVH 111
N++
Sbjct: 485 NMY 487
>sp|Q5XEY7|PP309_ARATH Pentatricopeptide repeat-containing protein At4g14170
OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2
Length = 477
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 16/127 (12%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ DEM ++G+ N VTF+ VL+ACA LVE L+ L+ E+ +VP ++HY V D +
Sbjct: 323 LFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCM 381
Query: 61 GRAGLLSEANEFL---------------WSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAGLL EA +FL S CK++G V++ V + L++L+P YV
Sbjct: 382 SRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYV 441
Query: 106 VLSNVHT 112
L+ +++
Sbjct: 442 TLAGLYS 448
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
M + M + ++ +E+TF+ +L AC+ VE G + F ++ +F +VP ++HYG +VDLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 61 GRAGLLSEANEF-----------LW----SACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
RAG L +A EF LW +AC H + L+ +V +R+ EL H YV
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 106 VLSNVH 111
+LSN++
Sbjct: 438 ILSNLY 443
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 4 EMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRA 63
EM K L+ NE+T ++VL++CA ++LG + H + ++ ++D+ +
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 64 GLLSEA 69
G L +A
Sbjct: 279 GSLDDA 284
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 3 DEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGR 62
+EM + G+ +E+TF+ +L+AC +++ G + F + F + P ++HY +VDLLGR
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 63 AGLLSEANEFL-----------WSA----CKIHGAVKLSHEVGKRLLELQPEHCRRYVVL 107
AGLL EA+ + W A C++HG V+L + K+LLEL P YV+L
Sbjct: 539 AGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLL 598
Query: 108 SNVH 111
++
Sbjct: 599 DGMY 602
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM + ++ N VTF++V++AC+ + LVE GL+ F+ + + + M+HYG +VDLL
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Query: 61 GRAGLLSEANEFLWS---------------ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L+EA +F+ AC+IH V + + +RL EL P+ +V
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHV 645
Query: 106 VLSNVH 111
+L+N++
Sbjct: 646 LLANIY 651
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ +EM G VTFV+VL AC+ LVE G LF ++ + + P +EHY C+VDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 61 GRAGLLSEANEF---------------LWSACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRA L EA + L +C+IHG V+L+ +RL L+P++ YV
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492
Query: 106 VLSNVH 111
+L++++
Sbjct: 493 LLADIY 498
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 1 MVDEMYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLL 60
+ M + G+ N++TFVAVL+ACA V+ G E F+++ F++ P EHY C++DLL
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 61 GRAGLLSEANEFL-----------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYV 105
GRAG L EA F+ W+ AC+ H + L+ L+ +QP YV
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 106 VLSNVH 111
+L+N++
Sbjct: 554 MLANMY 559
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 5 MYEKGLRANEVTFVAVLTACARARLVELGLELFHSLLGEFEVVPIMEHYGCVVDLLGRAG 64
M +G++ NEVTF++V AC+ + +V+ GL +F+ + ++ V P +HY CVVDLLGRAG
Sbjct: 609 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668
Query: 65 LLSEANEFL------------WS----ACKIHGAVKLSHEVGKRLLELQPEHCRRYVVLS 108
+ EA + + WS A +IH +++ + L++L+P YV+L+
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 109 NVHT 112
N+++
Sbjct: 729 NIYS 732
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,052,506
Number of Sequences: 539616
Number of extensions: 1411934
Number of successful extensions: 5011
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 4282
Number of HSP's gapped (non-prelim): 585
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)