Your job contains 1 sequence.
>033772
MATASMSASLIGSFKGLSLSSSSSSSFLKGDFTVCPKSVTVSLPPTSPLPLTIESAHKKG
AGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKGKMWGLARTIQYSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033772
(112 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162971 - symbol:RPL27 "ribosomal protein larg... 225 1.1e-18 1
UNIPROTKB|P66127 - symbol:rpmA "50S ribosomal protein L27... 158 1.3e-11 1
TIGR_CMR|APH_0698 - symbol:APH_0698 "ribosomal protein L2... 151 7.4e-11 1
TIGR_CMR|DET_1326 - symbol:DET_1326 "ribosomal protein L2... 148 1.5e-10 1
TIGR_CMR|CHY_0368 - symbol:CHY_0368 "ribosomal protein L2... 147 2.0e-10 1
UNIPROTKB|P0A7L8 - symbol:rpmA "50S ribosomal subunit pro... 146 2.5e-10 1
TIGR_CMR|ECH_0546 - symbol:ECH_0546 "ribosomal protein L2... 146 2.5e-10 1
TIGR_CMR|CPS_4511 - symbol:CPS_4511 "ribosomal protein L2... 144 4.1e-10 1
TIGR_CMR|GSU_3235 - symbol:GSU_3235 "ribosomal protein L2... 144 4.1e-10 1
UNIPROTKB|Q9KUS9 - symbol:rpmA "50S ribosomal protein L27... 143 5.2e-10 1
TIGR_CMR|CJE_0090 - symbol:CJE_0090 "ribosomal protein L2... 143 5.2e-10 1
TIGR_CMR|SO_3651 - symbol:SO_3651 "ribosomal protein L27"... 143 5.2e-10 1
TIGR_CMR|VC_0436 - symbol:VC_0436 "ribosomal protein L27"... 143 5.2e-10 1
TIGR_CMR|SPO_1989 - symbol:SPO_1989 "ribosomal protein L2... 139 1.4e-09 1
TIGR_CMR|NSE_0897 - symbol:NSE_0897 "ribosomal protein L2... 137 2.2e-09 1
TIGR_CMR|CBU_0386 - symbol:CBU_0386 "ribosomal protein L2... 132 7.6e-09 1
TAIR|locus:2039390 - symbol:AT2G16930 species:3702 "Arabi... 132 7.6e-09 1
TAIR|locus:2150881 - symbol:AT5G15220 species:3702 "Arabi... 132 7.6e-09 1
DICTYBASE|DDB_G0278889 - symbol:mrpl27 "ribosomal protein... 128 2.0e-08 1
TIGR_CMR|BA_4674 - symbol:BA_4674 "ribosomal protein L27"... 127 2.6e-08 1
GENEDB_PFALCIPARUM|PF10_0332 - symbol:PF10_0332 "ribosoma... 125 5.5e-08 1
UNIPROTKB|Q8IJ68 - symbol:PF10_0332 "Apicoplast ribosomal... 125 5.5e-08 1
POMBASE|SPAP19A11.05c - symbol:mrp7 "mitochondrial riboso... 119 1.8e-07 1
CGD|CAL0003737 - symbol:orf19.7203 species:5476 "Candida ... 105 4.1e-05 1
SGD|S000004950 - symbol:MRP7 "Mitochondrial ribosomal pro... 102 8.0e-05 1
ASPGD|ASPL0000011337 - symbol:AN8256 species:162425 "Emer... 100 0.00010 1
>TAIR|locus:2162971 [details] [associations]
symbol:RPL27 "ribosomal protein large subunit 27"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0006412 GO:GO:0009941 GO:GO:0005840
GO:GO:0003735 GO:GO:0009579 EMBL:AB010072 EMBL:AY046039
EMBL:AY117267 IPI:IPI00548609 RefSeq:NP_198911.1 UniGene:At.6581
ProteinModelPortal:Q9FLN4 SMR:Q9FLN4 STRING:Q9FLN4 PaxDb:Q9FLN4
PRIDE:Q9FLN4 EnsemblPlants:AT5G40950.1 GeneID:834097
KEGG:ath:AT5G40950 GeneFarm:202 TAIR:At5g40950 eggNOG:COG0211
HOGENOM:HOG000111610 InParanoid:Q9FLN4 KO:K02899 OMA:IYGDQVA
PhylomeDB:Q9FLN4 ProtClustDB:CLSN2686202 EvolutionaryTrace:Q9FLN4
Genevestigator:Q9FLN4 GermOnline:AT5G40950 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 Uniprot:Q9FLN4
Length = 198
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 47/57 (82%), Positives = 50/57 (87%)
Query: 53 IESAHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR 106
IESAHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPGAIIVRQRGTK GK G+ +
Sbjct: 56 IESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGK 112
>UNIPROTKB|P66127 [details] [associations]
symbol:rpmA "50S ribosomal protein L27" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:BX842579 eggNOG:COG0211
HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:G70680
RefSeq:NP_216957.1 RefSeq:NP_337000.1 RefSeq:YP_006515878.1
ProteinModelPortal:P66127 SMR:P66127 PRIDE:P66127
EnsemblBacteria:EBMYCT00000003382 EnsemblBacteria:EBMYCT00000072324
GeneID:13319151 GeneID:885919 GeneID:925819 KEGG:mtc:MT2517
KEGG:mtu:Rv2441c KEGG:mtv:RVBD_2441c PATRIC:18127284
TubercuList:Rv2441c Uniprot:P66127
Length = 86
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKKGA S++NGRDS QRLGVK +G QV K G I+VRQRGTK
Sbjct: 2 AHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTK 44
>TIGR_CMR|APH_0698 [details] [associations]
symbol:APH_0698 "ribosomal protein L27" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000315 "organellar large
ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0211 HOGENOM:HOG000111610
KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
RefSeq:YP_505280.1 ProteinModelPortal:Q2GK21 SMR:Q2GK21
STRING:Q2GK21 GeneID:3930867 KEGG:aph:APH_0698 PATRIC:20950082
OMA:DGIVKFE ProtClustDB:PRK05435 BioCyc:APHA212042:GHPM-717-MONOMER
Uniprot:Q2GK21
Length = 91
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR 106
A KK GS+ NGRDSRG+RLGVK FG ++ PG II+RQRGTK GK G+ R
Sbjct: 2 ATKKSGGSSCNGRDSRGRRLGVKKFGSELVIPGNIIIRQRGTKYHPGKNVGIGR 55
>TIGR_CMR|DET_1326 [details] [associations]
symbol:DET_1326 "ribosomal protein L27" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_182037.1 ProteinModelPortal:Q3Z6W2
SMR:Q3Z6W2 STRING:Q3Z6W2 GeneID:3229419 KEGG:det:DET1326
PATRIC:21609681 BioCyc:DETH243164:GJNF-1327-MONOMER Uniprot:Q3Z6W2
Length = 84
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR 106
AHKKGAGSTKNGRDS+ + LGVK F + G IIVRQRGT+ G+ GL R
Sbjct: 2 AHKKGAGSTKNGRDSKPKMLGVKRFAGEKVHSGTIIVRQRGTRIHPGENVGLGR 55
>TIGR_CMR|CHY_0368 [details] [associations]
symbol:CHY_0368 "ribosomal protein L27" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_359231.1 ProteinModelPortal:Q3AF53
SMR:Q3AF53 STRING:Q3AF53 GeneID:3727456 KEGG:chy:CHY_0368
PATRIC:21273897 BioCyc:CHYD246194:GJCN-369-MONOMER Uniprot:Q3AF53
Length = 88
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKKG GS+KNGRDS+ +RLGVK + Q G+I+VRQRGTK
Sbjct: 2 AHKKGVGSSKNGRDSKAKRLGVKRYAGQFVTAGSILVRQRGTK 44
>UNIPROTKB|P0A7L8 [details] [associations]
symbol:rpmA "50S ribosomal subunit protein L27"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
HAMAP:MF_00539 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO EMBL:D13267 eggNOG:COG0211
HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N
PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2
PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
OMA:DGIVKFE ProtClustDB:PRK05435 PIR:JS0767 RefSeq:NP_417652.1
RefSeq:YP_491370.1 ProteinModelPortal:P0A7L8 SMR:P0A7L8
DIP:DIP-47933N IntAct:P0A7L8 MINT:MINT-1317488 PRIDE:P0A7L8
EnsemblBacteria:EBESCT00000003477 EnsemblBacteria:EBESCT00000016576
GeneID:12932199 GeneID:945190 KEGG:ecj:Y75_p3105 KEGG:eco:b3185
PATRIC:32121790 EchoBASE:EB4296 EcoGene:EG50002
BioCyc:EcoCyc:EG50002-MONOMER BioCyc:ECOL316407:JW3152-MONOMER
EvolutionaryTrace:P0A7L8 Genevestigator:P0A7L8 Uniprot:P0A7L8
Length = 85
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTK
Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK 44
>TIGR_CMR|ECH_0546 [details] [associations]
symbol:ECH_0546 "ribosomal protein L27" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0000315 "organellar large
ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_507359.1 ProteinModelPortal:Q2GGS4
SMR:Q2GGS4 STRING:Q2GGS4 GeneID:3927430 KEGG:ech:ECH_0546
PATRIC:20576558 BioCyc:ECHA205920:GJNR-548-MONOMER Uniprot:Q2GGS4
Length = 88
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR 106
A KK GS+ NGRDSRG+RLGVK FG + PG II+RQRGTK GK G+ +
Sbjct: 2 ATKKSGGSSGNGRDSRGRRLGVKKFGSEKVIPGNIIIRQRGTKYHPGKNVGIGK 55
>TIGR_CMR|CPS_4511 [details] [associations]
symbol:CPS_4511 "ribosomal protein L27" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_271159.1 ProteinModelPortal:Q47VL3
SMR:Q47VL3 STRING:Q47VL3 GeneID:3522522 KEGG:cps:CPS_4511
PATRIC:21471845 BioCyc:CPSY167879:GI48-4520-MONOMER Uniprot:Q47VL3
Length = 85
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK AGST+NGRDS +RLGVK FG + G IIVRQRGT+
Sbjct: 2 AHKKAAGSTRNGRDSEAKRLGVKRFGGESVLAGNIIVRQRGTR 44
>TIGR_CMR|GSU_3235 [details] [associations]
symbol:GSU_3235 "ribosomal protein L27" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_954276.1 ProteinModelPortal:Q747N0
SMR:Q747N0 GeneID:2688301 KEGG:gsu:GSU3235 PATRIC:22029317
BioCyc:GSUL243231:GH27-3213-MONOMER Uniprot:Q747N0
Length = 85
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 28/43 (65%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKKG GST+NGRDS +RLG K FG + K G II RQRGT+
Sbjct: 2 AHKKGVGSTRNGRDSESKRLGCKKFGGETVKAGNIIYRQRGTQ 44
>UNIPROTKB|Q9KUS9 [details] [associations]
symbol:rpmA "50S ribosomal protein L27" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
HAMAP:MF_00539 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
Uniprot:Q9KUS9
Length = 86
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTK
Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTK 44
>TIGR_CMR|CJE_0090 [details] [associations]
symbol:CJE_0090 "ribosomal protein L27" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
GO:GO:0006412 GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_178114.1 ProteinModelPortal:Q5HX71
SMR:Q5HX71 STRING:Q5HX71 GeneID:3230853 KEGG:cjr:CJE0090
PATRIC:20041887 BioCyc:CJEJ195099:GJC0-94-MONOMER Uniprot:Q5HX71
Length = 84
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGT 97
AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT
Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGT 43
>TIGR_CMR|SO_3651 [details] [associations]
symbol:SO_3651 "ribosomal protein L27" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_719193.1 ProteinModelPortal:Q8EB81
SMR:Q8EB81 GeneID:1171310 KEGG:son:SO_3651 PATRIC:23526988
Uniprot:Q8EB81
Length = 84
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTK
Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTK 44
>TIGR_CMR|VC_0436 [details] [associations]
symbol:VC_0436 "ribosomal protein L27" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
Uniprot:Q9KUS9
Length = 86
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTK
Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTK 44
>TIGR_CMR|SPO_1989 [details] [associations]
symbol:SPO_1989 "ribosomal protein L27" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_167224.1 ProteinModelPortal:Q5LRY1
SMR:Q5LRY1 GeneID:3195614 KEGG:sil:SPO1989 PATRIC:23377309
Uniprot:Q5LRY1
Length = 89
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
AHKK GS++NGRDS G+RLGVK +G + G I+VRQRGTK
Sbjct: 2 AHKKAGGSSRNGRDSIGRRLGVKKYGGEAVGAGNILVRQRGTK 44
>TIGR_CMR|NSE_0897 [details] [associations]
symbol:NSE_0897 "ribosomal protein L27" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_506763.1 ProteinModelPortal:Q2GCN3
SMR:Q2GCN3 STRING:Q2GCN3 GeneID:3931866 KEGG:nse:NSE_0897
PATRIC:22681785 BioCyc:NSEN222891:GHFU-900-MONOMER Uniprot:Q2GCN3
Length = 82
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
A KK GS+ NGRDS G+RLGVK FG + PG IIVRQRGTK
Sbjct: 2 ATKKAGGSSSNGRDSIGKRLGVKKFGSERVIPGDIIVRQRGTK 44
>TIGR_CMR|CBU_0386 [details] [associations]
symbol:CBU_0386 "ribosomal protein L27" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_819425.1 ProteinModelPortal:Q83ED9
SMR:Q83ED9 GeneID:1208269 KEGG:cbu:CBU_0386 PATRIC:17929469
BioCyc:CBUR227377:GJ7S-389-MONOMER Uniprot:Q83ED9
Length = 90
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 30/54 (55%), Positives = 35/54 (64%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR 106
AHKK GST+NGRDS + LGVK FG + G IIVRQRGT G+ G+ R
Sbjct: 2 AHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGR 55
>TAIR|locus:2039390 [details] [associations]
symbol:AT2G16930 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC005167 HOGENOM:HOG000111610 ProtClustDB:CLSN2686202
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
UniGene:At.48483 EMBL:BT003674 EMBL:AK118574 IPI:IPI00537213
PIR:A84546 RefSeq:NP_001077904.1 RefSeq:NP_565398.1
RefSeq:NP_849961.1 ProteinModelPortal:Q9ZVX0 SMR:Q9ZVX0
IntAct:Q9ZVX0 STRING:Q9ZVX0 EnsemblPlants:AT2G16930.1
EnsemblPlants:AT2G16930.2 EnsemblPlants:AT2G16930.3 GeneID:816196
KEGG:ath:AT2G16930 TAIR:At2g16930 InParanoid:Q9ZVX0 OMA:LHPVYTS
PhylomeDB:Q9ZVX0 ArrayExpress:Q9ZVX0 Genevestigator:Q9ZVX0
Uniprot:Q9ZVX0
Length = 154
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
A KK AGSTKNGRDS + LGVK FG + PG IIVRQRGT+
Sbjct: 47 ATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTR 89
>TAIR|locus:2150881 [details] [associations]
symbol:AT5G15220 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002688 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 ProtClustDB:CLSN2686202
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 EMBL:AY048281
EMBL:AY079120 IPI:IPI01018435 RefSeq:NP_568310.1 UniGene:At.1768
UniGene:At.48483 ProteinModelPortal:Q94AC6 SMR:Q94AC6 STRING:Q94AC6
PRIDE:Q94AC6 EnsemblPlants:AT5G15220.1 GeneID:831374
KEGG:ath:AT5G15220 TAIR:At5g15220 InParanoid:Q94AC6 OMA:KWVHVEP
PhylomeDB:Q94AC6 Genevestigator:Q94AC6 Uniprot:Q94AC6
Length = 154
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
A KK AGSTKNGRDS + LGVK FG + PG IIVRQRGT+
Sbjct: 47 ATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTR 89
>DICTYBASE|DDB_G0278889 [details] [associations]
symbol:mrpl27 "ribosomal protein L27, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 dictyBase:DDB_G0278889
GO:GO:0005739 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AAFI02000024 eggNOG:COG0211 KO:K02899
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
RefSeq:XP_647803.1 HSSP:Q9RY65 ProteinModelPortal:Q54XK0 SMR:Q54XK0
STRING:Q54XK0 EnsemblProtists:DDB0252561 GeneID:8621763
KEGG:ddi:DDB_G0278889 Uniprot:Q54XK0
Length = 142
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
A KK AGSTKNGR S+ + LG+K G+Q+ PG II+RQRGT+
Sbjct: 26 ATKKSAGSTKNGRTSQPKNLGLKKSGNQLVYPGEIIIRQRGTE 68
>TIGR_CMR|BA_4674 [details] [associations]
symbol:BA_4674 "ribosomal protein L27" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610
KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
OMA:DGIVKFE ProtClustDB:PRK05435 RefSeq:NP_846888.1
RefSeq:YP_021322.1 RefSeq:YP_030587.1 ProteinModelPortal:Q81LE8
SMR:Q81LE8 DNASU:1086262 EnsemblBacteria:EBBACT00000012483
EnsemblBacteria:EBBACT00000014952 EnsemblBacteria:EBBACT00000020200
GeneID:1086262 GeneID:2817426 GeneID:2849082 KEGG:ban:BA_4674
KEGG:bar:GBAA_4674 KEGG:bat:BAS4340
BioCyc:BANT260799:GJAJ-4395-MONOMER
BioCyc:BANT261594:GJ7F-4543-MONOMER Uniprot:Q81LE8
Length = 96
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 26/43 (60%), Positives = 30/43 (69%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
A KKG GSTKNGRDS+ +RLG K Q G+I+ RQRGTK
Sbjct: 10 ASKKGVGSTKNGRDSQSKRLGAKRADGQTVSGGSILYRQRGTK 52
>GENEDB_PFALCIPARUM|PF10_0332 [details] [associations]
symbol:PF10_0332 "ribosomal protein L27,
putative" species:5833 "Plasmodium falciparum" [GO:0000311 "plastid
large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 GO:GO:0006412
GO:GO:0003735 EMBL:AE014185 GO:GO:0020011 GO:GO:0000311
PANTHER:PTHR15893 SUPFAM:SSF110324 RefSeq:XP_001347616.1
ProteinModelPortal:Q8IJ68 SMR:Q8IJ68 EnsemblProtists:PF10_0332:mRNA
GeneID:810489 KEGG:pfa:PF10_0332 EuPathDB:PlasmoDB:PF3D7_1034200
HOGENOM:HOG000284541 ProtClustDB:CLSZ2433442 Uniprot:Q8IJ68
Length = 214
Score = 125 (49.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRG 96
A KKG GS++NGRDS + LGVK+ G+ A G IIVRQRG
Sbjct: 109 AKKKGVGSSRNGRDSNPKNLGVKVLGNNFAHAGNIIVRQRG 149
>UNIPROTKB|Q8IJ68 [details] [associations]
symbol:PF10_0332 "Apicoplast ribosomal protein L27,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000311
"plastid large ribosomal subunit" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
GO:GO:0006412 GO:GO:0003735 EMBL:AE014185 GO:GO:0020011
GO:GO:0000311 PANTHER:PTHR15893 SUPFAM:SSF110324
RefSeq:XP_001347616.1 ProteinModelPortal:Q8IJ68 SMR:Q8IJ68
EnsemblProtists:PF10_0332:mRNA GeneID:810489 KEGG:pfa:PF10_0332
EuPathDB:PlasmoDB:PF3D7_1034200 HOGENOM:HOG000284541
ProtClustDB:CLSZ2433442 Uniprot:Q8IJ68
Length = 214
Score = 125 (49.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 56 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRG 96
A KKG GS++NGRDS + LGVK+ G+ A G IIVRQRG
Sbjct: 109 AKKKGVGSSRNGRDSNPKNLGVKVLGNNFAHAGNIIVRQRG 149
>POMBASE|SPAP19A11.05c [details] [associations]
symbol:mrp7 "mitochondrial ribosomal protein subunit
L27 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000048 "peptidyltransferase activity" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
PomBase:SPAP19A11.05c EMBL:CU329671 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 eggNOG:COG0211 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 RefSeq:NP_596173.1 ProteinModelPortal:Q9HDV5
SMR:Q9HDV5 STRING:Q9HDV5 EnsemblFungi:SPAP19A11.05c.1
GeneID:2540102 KEGG:spo:SPAP19A11.05c OMA:KRSENQF OrthoDB:EOG4ZPJ4G
NextBio:20801238 GO:GO:0000048 Uniprot:Q9HDV5
Length = 153
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 53 IESAHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK---GKMWGLAR--T 107
I ++ K G GS+KN DS G+RLG+K +Q + G I++RQRGTK G GL + T
Sbjct: 34 IRTSTKHGGGSSKNTGDSAGRRLGIKRSENQFVRAGEILIRQRGTKFHPGDNTGLGKDHT 93
Query: 108 IQYSL 112
I YSL
Sbjct: 94 I-YSL 97
>CGD|CAL0003737 [details] [associations]
symbol:orf19.7203 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 CGD:CAL0003737 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 EMBL:AACQ01000089
RefSeq:XP_715251.1 RefSeq:XP_888984.1 ProteinModelPortal:Q5A092
STRING:Q5A092 GeneID:3643118 GeneID:3704027 KEGG:cal:CaO19.7203
KEGG:cal:CaO19_7203 Uniprot:Q5A092
Length = 389
Score = 105 (42.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 53 IESAHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
I +A K+ +GS N +DS G+RLG K PG II+RQRGTK
Sbjct: 29 IRTAKKRVSGSRTNNKDSAGRRLGPKKNEGHFVNPGQIIMRQRGTK 74
>SGD|S000004950 [details] [associations]
symbol:MRP7 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0000048 "peptidyltransferase activity"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IPI]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 SGD:S000004950 EMBL:BK006947
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 EMBL:X77114
eggNOG:COG0211 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OrthoDB:EOG4ZPJ4G GO:GO:0000048 EMBL:M22116
EMBL:Z71281 EMBL:AY693088 PIR:S62914 RefSeq:NP_014393.1
ProteinModelPortal:P12687 SMR:P12687 DIP:DIP-5620N IntAct:P12687
MINT:MINT-476381 STRING:P12687 PaxDb:P12687 PeptideAtlas:P12687
EnsemblFungi:YNL005C GeneID:855727 KEGG:sce:YNL005C CYGD:YNL005c
GeneTree:ENSGT00390000014660 HOGENOM:HOG000248704 OMA:TSMKDSA
NextBio:980102 Genevestigator:P12687 GermOnline:YNL005C
Uniprot:P12687
Length = 371
Score = 102 (41.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 53 IESAHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
+ +A K+ AGS + +DS G+RLG K + Q G II+RQRGTK
Sbjct: 25 VRNATKRAAGSRTSMKDSAGRRLGPKKYEGQDVSTGEIIMRQRGTK 70
>ASPGD|ASPL0000011337 [details] [associations]
symbol:AN8256 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 GO:GO:0006412
GO:GO:0005840 EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000145
eggNOG:COG0211 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 RefSeq:XP_681525.1 ProteinModelPortal:Q5ATX4
STRING:Q5ATX4 EnsemblFungi:CADANIAT00004314 GeneID:2868889
KEGG:ani:AN8256.2 HOGENOM:HOG000159638 OMA:ENCAMGR
OrthoDB:EOG40CMSB Uniprot:Q5ATX4
Length = 317
Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 55 SAHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTK 98
++H + K+ RD G+RLG K G + PG II RQRGTK
Sbjct: 106 ASHSAQGAANKHSRDPAGKRLGAKRTGGEYVVPGCIIFRQRGTK 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 112 76 0.00091 102 3 11 22 0.39 29
29 0.48 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 524 (56 KB)
Total size of DFA: 90 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.39u 0.17s 6.56t Elapsed: 00:00:01
Total cpu time: 6.39u 0.17s 6.56t Elapsed: 00:00:01
Start: Fri May 10 03:28:05 2013 End: Fri May 10 03:28:06 2013