STRING 9.05 
  RPL27 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
RPL27
RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27); structural constituent of ribosome; RIBOSOMAL PROTEIN LARGE SUBUNIT 27 (RPL27); FUNCTIONS IN- structural constituent of ribosome; INVOLVED IN- translation; LOCATED IN- thylakoid, ribosome, chloroplast stroma, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Ribosomal protein L27 (InterPro-IPR001684), Ribosomal protein L27, conserved site (InterPro-IPR018261); BEST Arabidopsis thaliana protein match is- ribosomal protein L27 family protein (TAIR-AT5G15220.1); Has 5099 Blast hits to [...] (198 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
RPL21
50S ribosomal protein L21, chloroplast / CL21 (RPL21); 50S ribosomal protein L21, chloroplast / [...] (220 aa)
    0.977
AT5G54600
50S ribosomal protein L24, chloroplast (CL24); 50S ribosomal protein L24, chloroplast (CL24); F [...] (198 aa)
     0.965
RPL3A
ribosomal protein L3 family protein; ribosomal protein L3 family protein; FUNCTIONS IN- structu [...] (271 aa)
    0.959
AT3G13120
30S ribosomal protein S10, chloroplast, putative; 30S ribosomal protein S10, chloroplast, putat [...] (191 aa)
      0.944
PSRP6
PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6); plastid-specific ribosomal protein 6 precurso [...] (106 aa)
      0.943
AT3G63490
ribosomal protein L1 family protein; ribosomal protein L1 family protein; FUNCTIONS IN- structu [...] (346 aa)
    0.938
AT4G01310
ribosomal protein L5 family protein; ribosomal protein L5 family protein; FUNCTIONS IN- structu [...] (262 aa)
   0.936
AT2G33800
ribosomal protein S5 family protein; ribosomal protein S5 family protein; FUNCTIONS IN- structu [...] (303 aa)
     0.932
emb2394
emb2394 (embryo defective 2394); structural constituent of ribosome; embryo defective 2394 (emb [...] (223 aa)
    0.925
PRPL11
PRPL11 (PLASTID RIBOSOMAL PROTEIN L11); structural constituent of ribosome; mutant has Decrease [...] (222 aa)
    0.924
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink