Query 033773
Match_columns 112
No_of_seqs 113 out of 833
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:57:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zom_A CUTA1, protein CUTA, ch 100.0 2.5E-50 8.6E-55 281.6 13.5 112 1-112 1-112 (113)
2 3ahp_A CUTA1; thermostable pro 100.0 2.4E-49 8.2E-54 274.8 13.2 108 5-112 1-108 (108)
3 4e98_A CUTA1 divalent ION tole 100.0 2.5E-49 8.7E-54 284.7 13.7 111 1-111 27-137 (138)
4 1nza_A CUTA, divalent cation t 100.0 6.7E-49 2.3E-53 270.6 12.5 102 10-111 2-103 (103)
5 1naq_A Periplasmic divalent ca 100.0 1.2E-48 4.2E-53 272.7 13.8 106 6-111 7-112 (112)
6 1vhf_A Periplasmic divalent ca 100.0 1.2E-48 4.1E-53 273.3 13.6 102 9-111 2-103 (113)
7 3gsd_A Divalent-cation toleran 100.0 7.9E-49 2.7E-53 277.3 12.2 101 10-110 21-121 (122)
8 2nuh_A Periplasmic divalent ca 100.0 1.5E-48 5.1E-53 274.5 12.6 102 10-111 5-106 (118)
9 1uku_A CUTA1, periplasmic diva 100.0 2.4E-48 8.3E-53 267.3 13.1 100 11-111 2-101 (102)
10 1p1l_A CUTA, periplasmic dival 100.0 3.5E-48 1.2E-52 266.6 13.6 101 10-111 2-102 (102)
11 1kr4_A Protein TM1056, CUTA; s 100.0 6.9E-48 2.4E-52 273.4 12.9 103 9-112 22-124 (125)
12 1o5j_A Periplasmic divalent ca 100.0 1.7E-47 5.9E-52 267.4 13.3 100 10-110 13-112 (113)
13 1osc_A Similar to divalent cat 100.0 4.3E-47 1.5E-51 269.7 12.8 104 9-112 22-125 (126)
14 2zfh_A CUTA; human brain, trim 100.0 3.4E-46 1.2E-50 277.4 13.2 104 8-111 66-169 (179)
15 2gx8_A NIF3-related protein; s 96.1 0.037 1.3E-06 45.0 9.3 75 20-95 170-260 (397)
16 2nyd_A UPF0135 protein SA1388; 94.8 0.0074 2.5E-07 48.7 0.9 43 52-94 191-233 (370)
17 1v3f_A Pleckstrin 2; three-hel 79.4 1.9 6.5E-05 29.2 3.6 38 17-54 53-105 (120)
18 2cso_A Pleckstrin; DEP domain, 74.7 3 0.0001 28.7 3.6 37 17-53 63-113 (127)
19 2ysr_A DEP domain-containing p 72.1 3.2 0.00011 27.4 3.1 24 17-40 63-86 (105)
20 1uhw_A Pleckstrin; three-helix 66.9 3.9 0.00013 27.5 2.7 24 17-40 53-76 (109)
21 1fsh_A Dishevelled-1; three-he 66.0 3.6 0.00012 27.1 2.3 24 17-40 67-90 (105)
22 1tr0_A Stable protein 1; plant 57.6 6 0.00021 25.4 2.2 79 1-84 1-84 (108)
23 2gjh_A Designed protein; oblig 52.8 25 0.00086 20.9 4.2 25 8-32 1-25 (62)
24 3lk4_B F-actin-capping protein 45.6 15 0.0005 28.6 3.0 24 42-67 113-136 (277)
25 4akr_B F-actin-capping protein 43.8 16 0.00055 28.6 3.0 24 42-67 131-154 (290)
26 3aa0_B F-actin-capping protein 35.0 31 0.0011 26.3 3.3 24 42-67 113-136 (244)
27 1b4b_A Arginine repressor; cor 34.3 52 0.0018 19.8 3.7 32 59-93 12-43 (71)
28 3jtn_A YPBH, adapter protein M 30.9 49 0.0017 20.7 3.3 55 13-81 3-58 (91)
29 3ts9_A Interferon-induced heli 26.9 31 0.0011 24.1 1.9 16 94-109 30-45 (138)
30 2cvi_A 75AA long hypothetical 26.8 90 0.0031 18.4 3.9 37 61-102 4-40 (83)
31 2v3s_A Serine/threonine-protei 26.6 19 0.00064 23.8 0.7 24 17-40 24-47 (96)
32 2ixm_A Serine/threonine-protei 26.5 55 0.0019 25.6 3.5 38 65-108 55-92 (303)
33 3ml6_A Chimeric complex betwee 25.8 36 0.0012 27.0 2.3 24 17-40 55-78 (385)
34 1in0_A YAJQ protein, HI1034; a 25.3 1.9E+02 0.0064 20.7 5.9 55 17-88 101-155 (163)
35 1rq8_A Conserved hypothetical 24.7 1.5E+02 0.0052 19.3 5.1 40 13-52 48-87 (104)
36 1mwq_A Hypothetical protein HI 24.5 64 0.0022 20.0 3.0 33 10-42 61-95 (101)
37 2pbi_A Regulator of G-protein 23.4 57 0.002 26.4 3.1 35 19-53 68-107 (424)
38 2qn6_B Translation initiation 22.6 1.1E+02 0.0037 19.5 3.8 25 8-32 51-75 (93)
39 1gh9_A 8.3 kDa protein (gene M 21.6 29 0.001 21.4 0.8 23 13-35 37-59 (71)
40 3mml_B Allophanate hydrolase s 21.3 1.5E+02 0.0052 21.9 4.9 38 13-50 32-69 (228)
41 2ixn_A Serine/threonine-protei 21.3 59 0.002 25.5 2.7 39 65-108 52-91 (310)
42 2lqj_A Mg2+ transport protein; 21.0 1.7E+02 0.0057 18.5 6.2 64 11-81 9-73 (94)
43 1oao_C CODH, carbon monoxide d 20.6 1.4E+02 0.0047 26.2 5.0 31 9-39 155-185 (729)
44 3aqb_A Component A of hexapren 20.2 24 0.00083 25.0 0.2 23 65-87 5-27 (147)
No 1
>2zom_A CUTA1, protein CUTA, chloroplast, putative, expressed; trimeric structure, protein stability, unknown function; 3.02A {Oryza sativa subsp}
Probab=100.00 E-value=2.5e-50 Score=281.65 Aligned_cols=112 Identities=80% Similarity=1.206 Sum_probs=104.8
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHH
Q 033773 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVK 80 (112)
Q Consensus 1 ~~~~~~~~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~ 80 (112)
|+++++...+++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+
T Consensus 1 ~~~~~~~~~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~ 80 (113)
T 2zom_A 1 MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVK 80 (113)
T ss_dssp ----CCSCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred CCCcCCCCCEEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEeCCEEeEeeEEEEEEEECHHHHHHHHHHHH
Confidence 78888877899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCcceEEEEecCCCCHhHHHHHHhhcCC
Q 033773 81 ANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 112 (112)
Q Consensus 81 ~~HpYe~PeIi~~~i~~~~~~Yl~Wi~~~~~~ 112 (112)
++||||+|||+++|+.+|+++|++|+.+++++
T Consensus 81 ~~HpYevPeIi~lpi~~g~~~Yl~Wi~~~~~~ 112 (113)
T 2zom_A 81 ANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 112 (113)
T ss_dssp HTCSSSSCCCEEEECCCCCHHHHHHHHHHCC-
T ss_pred HHCCCcCCEEEEEEccCCCHHHHHHHHHHccC
Confidence 99999999999999999999999999999863
No 2
>3ahp_A CUTA1; thermostable protein, electron transport; 2.70A {Shewanella}
Probab=100.00 E-value=2.4e-49 Score=274.81 Aligned_cols=108 Identities=33% Similarity=0.629 Sum_probs=102.7
Q ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCC
Q 033773 5 SKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHE 84 (112)
Q Consensus 5 ~~~~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~Hp 84 (112)
|+..++++|+||+||.++|++|||.||++|||||+|++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+++||
T Consensus 1 ~~~~~~~~V~tT~p~~~~A~~ia~~Lve~rLAACvni~p~i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~I~~~Hp 80 (108)
T 3ahp_A 1 MYKPEQLLIFTTCPDADIACRIATALVEAKLAACVQIGQAVESIYQWDNNICQSHEVPMQIKCMTTDYPAIEQLVITMHP 80 (108)
T ss_dssp --CCSEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEECSCEEEEEESSSSEEEEEEEEEEEEEEGGGHHHHHHHHHHHSS
T ss_pred CCcCcEEEEEEecCCHHHHHHHHHHHHhCCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCC
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEecCCCCHhHHHHHHhhcCC
Q 033773 85 YDVPEVIALPITGGSQPYLEWLKSSTRD 112 (112)
Q Consensus 85 Ye~PeIi~~~i~~~~~~Yl~Wi~~~~~~ 112 (112)
||+|||+++|+.+|+++|++|+.+++++
T Consensus 81 YevPeIi~lpi~~g~~~Yl~Wi~~~~~~ 108 (108)
T 3ahp_A 81 YEVPEFIATPIIGGFGPYLQWIKDNSPS 108 (108)
T ss_dssp SSSCCEEEEEECEECHHHHHHHHTTCCC
T ss_pred CcCCEEEEEEccCCCHHHHHHHHHhcCC
Confidence 9999999999999999999999998863
No 3
>4e98_A CUTA1 divalent ION tolerance protein; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, signaling protein; 2.00A {Cryptosporidium parvum}
Probab=100.00 E-value=2.5e-49 Score=284.74 Aligned_cols=111 Identities=32% Similarity=0.720 Sum_probs=106.3
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHH
Q 033773 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVK 80 (112)
Q Consensus 1 ~~~~~~~~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~ 80 (112)
|++...++++++|+||+||+++|++|||.||++||||||||+|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+
T Consensus 27 ~~~~~~~~~~~lV~tT~p~~e~A~~IA~~LVe~rLAACVnI~p~i~SiY~WeG~Ie~~~E~~LliKT~~~~~~~L~~~I~ 106 (138)
T 4e98_A 27 MTETKIESNIILIYISAPNQDEATSIAKTLVDEELCACVSIIPSVRSIYKFKGQVHDENEVMLLVKTTSQLFTTLKEKVT 106 (138)
T ss_dssp -CCCCSCCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred CccccCCCCEEEEEEecCCHHHHHHHHHHHHHCCceeEEEecCCeeEEEEeCCeeeEceEEEEEEEECHHHHHHHHHHHH
Confidence 56666677789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCcceEEEEecCCCCHhHHHHHHhhcC
Q 033773 81 ANHEYDVPEVIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 81 ~~HpYe~PeIi~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
++||||+|||+++|+.+|+++|++||.++++
T Consensus 107 e~HPYevPeIi~lpi~~g~~~YL~Wi~~~t~ 137 (138)
T 4e98_A 107 EIHSYELPEIIATKVVYGNENYINWVNQTVR 137 (138)
T ss_dssp HHCSSSSCCEEEEECCEECHHHHHHHHHHCC
T ss_pred HHCCCcCcEEEEEEcccCCHHHHHHHHHHhc
Confidence 9999999999999999999999999999886
No 4
>1nza_A CUTA, divalent cation tolerance protein; cellular tolerance, monomer, structural genomics, RIKE structural genomics/proteomics initiative; 1.70A {Thermus thermophilus} SCOP: d.58.5.2 PDB: 1v6h_A
Probab=100.00 E-value=6.7e-49 Score=270.57 Aligned_cols=102 Identities=47% Similarity=0.887 Sum_probs=99.6
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcce
Q 033773 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 89 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~Pe 89 (112)
-++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+||
T Consensus 2 ~~~V~tT~p~~~~A~~ia~~Lve~rLAACvni~p~i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~i~~~HpYevPe 81 (103)
T 1nza_A 2 EEVVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVPE 81 (103)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEESSSCEEEEEEEEEEEEEETTTHHHHHHHHHHHSSSSSCC
T ss_pred eEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEECCEeeeceEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHHHHHhhcC
Q 033773 90 VIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 90 Ii~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
|+++|+.+|+++|++|+.++++
T Consensus 82 Ii~~pi~~g~~~Yl~Wi~~~~~ 103 (103)
T 1nza_A 82 IVALPIAEGNREYLDWLRENTG 103 (103)
T ss_dssp EEEEECCCCCHHHHHHHHHTCC
T ss_pred EEEEEccCCCHHHHHHHHHhcC
Confidence 9999999999999999999864
No 5
>1naq_A Periplasmic divalent cation tolerance protein CUTA; copper resistance, structural proteomics in europe, spine, structural genomics; HET: MBO; 1.70A {Escherichia coli} SCOP: d.58.5.2 PDB: 3ah6_A 3aa9_A 3aa8_A 3opk_A
Probab=100.00 E-value=1.2e-48 Score=272.73 Aligned_cols=106 Identities=38% Similarity=0.734 Sum_probs=101.9
Q ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCC
Q 033773 6 KTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEY 85 (112)
Q Consensus 6 ~~~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpY 85 (112)
.+..+++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+++|||
T Consensus 7 ~~~~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpY 86 (112)
T 1naq_A 7 SNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPY 86 (112)
T ss_dssp CCCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHSTT
T ss_pred CCCCEEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCC
Confidence 33457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEecCCCCHhHHHHHHhhcC
Q 033773 86 DVPEVIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 86 e~PeIi~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
|+|||+++|+.+|+++|++|+.++++
T Consensus 87 evPeIi~lpi~~g~~~Yl~Wi~~~~~ 112 (112)
T 1naq_A 87 QTPELLVLPVTHGDTDYLSWLNASLR 112 (112)
T ss_dssp SCCCEEEEECCBCCHHHHHHHHHHTC
T ss_pred cCCEEEEEEcccCCHHHHHHHHHhcC
Confidence 99999999999999999999999874
No 6
>1vhf_A Periplasmic divalent cation tolerance protein; structural genomics, unknown function; 1.54A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=1.2e-48 Score=273.27 Aligned_cols=102 Identities=33% Similarity=0.588 Sum_probs=99.3
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcc
Q 033773 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVP 88 (112)
Q Consensus 9 ~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~P 88 (112)
.+++|+||+||.++|++|||.||++|||||||++ +|+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+|
T Consensus 2 ~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~-~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 80 (113)
T 1vhf_A 2 SLILVYSTFPNEEKALEIGRKLLEKRLIACFNAF-EIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETP 80 (113)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEE-EEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred cEEEEEEecCCHHHHHHHHHHHHHCCeEEEEEEe-eeeEEEEECCEeeeCeEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 4799999999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHHHHHhhcC
Q 033773 89 EVIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 89 eIi~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
||+++|+.+|+++|++|+.++++
T Consensus 81 eIi~lpi~~g~~~Yl~Wi~~~t~ 103 (113)
T 1vhf_A 81 AIFTLKVENVLTEYMNWLRESVL 103 (113)
T ss_dssp CEEEEECSCCCHHHHHHHHHHC-
T ss_pred EEEEEEccCCCHHHHHHHHHHcC
Confidence 99999999999999999999885
No 7
>3gsd_A Divalent-cation tolerance protein CUTA; IDP00456, metal-BIN structural genomics, center for structural genomics of INFE diseases, csgid; HET: EPE; 2.05A {Yersinia pestis CO92} SCOP: d.58.5.2
Probab=100.00 E-value=7.9e-49 Score=277.29 Aligned_cols=101 Identities=36% Similarity=0.736 Sum_probs=99.5
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcce
Q 033773 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 89 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~Pe 89 (112)
+++|+||+||+++|++|||.||++|||||||++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+||
T Consensus 21 ~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevPe 100 (122)
T 3gsd_A 21 AIVVLCTAPDEASAQNLAAQVLGEKLAACVTLLPGATSLYYWEGKLEQEYEVQLLFKSNTDHQQALLTYIKQHHPYQTPE 100 (122)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHSCSSSSCC
T ss_pred eEEEEEecCCHHHHHHHHHHHHHCCceEEEEecCCeeEEEEECCEEeEceEEEEEEEEcHHHHHHHHHHHHHHCCCcCcE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHHHHHhhc
Q 033773 90 VIALPITGGSQPYLEWLKSST 110 (112)
Q Consensus 90 Ii~~~i~~~~~~Yl~Wi~~~~ 110 (112)
|+++|+.+|+++|++|+.+++
T Consensus 101 Ii~lpi~~g~~~Yl~Wi~~~~ 121 (122)
T 3gsd_A 101 LLVLPVRDGDKDYLSWLNASL 121 (122)
T ss_dssp CEEEECCEECHHHHHHHHHHC
T ss_pred EEEEEcccCCHHHHHHHHHhc
Confidence 999999999999999999876
No 8
>2nuh_A Periplasmic divalent cation tolerance protein; CUTA, unknown function; 1.39A {Xylella fastidiosa}
Probab=100.00 E-value=1.5e-48 Score=274.51 Aligned_cols=102 Identities=31% Similarity=0.638 Sum_probs=100.4
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcce
Q 033773 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 89 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~Pe 89 (112)
+++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+||
T Consensus 5 ~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevPe 84 (118)
T 2nuh_A 5 VYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAVSTYRWQGKIETTQEIQLLIKTNAVHVNAAITRLCALHPYRLPE 84 (118)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEESSSSEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSCC
T ss_pred EEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEECCEeeeCeEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHHHHHhhcC
Q 033773 90 VIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 90 Ii~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
|+++|+.+|+++|++||.++++
T Consensus 85 Ii~lpi~~g~~~Yl~Wi~~~t~ 106 (118)
T 2nuh_A 85 AIAVQVSVGLPEYLTWINTEID 106 (118)
T ss_dssp CEEEECCCCCHHHHHHHHHHHC
T ss_pred EEEEEccCCCHHHHHHHHHHcC
Confidence 9999999999999999999885
No 9
>1uku_A CUTA1, periplasmic divalent cation tolerance protein CUT; copper tolerance, structural genomics, metal binding P; 1.45A {Pyrococcus horikoshii} SCOP: d.58.5.2 PDB: 1umj_A 1v99_A* 1v9b_A 1j2v_A 2e66_A
Probab=100.00 E-value=2.4e-48 Score=267.32 Aligned_cols=100 Identities=38% Similarity=0.710 Sum_probs=98.6
Q ss_pred EEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcceE
Q 033773 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEV 90 (112)
Q Consensus 11 ~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~PeI 90 (112)
++|+||+||.++|++|||.||++|||||||++|+ +|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+|||
T Consensus 2 ~~V~~T~p~~~~A~~ia~~Lve~rLAACvni~p~-~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~i~~~HpYevPeI 80 (102)
T 1uku_A 2 IIVYTTFPDWESAEKVVKTLLKERLIACANLREH-RAFYWWEGKIEEDKEVGAILKTREDLWEELKERIKELHPYDVPAI 80 (102)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEE-EEEEEETTEEEEEEEEEEEEEECGGGHHHHHHHHHHHCSSSSCCC
T ss_pred EEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCC-ceEEEECCEeeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCCEE
Confidence 7999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHHHHHhhcC
Q 033773 91 IALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 91 i~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
+++|+.+|+++|++|+.++++
T Consensus 81 i~~pi~~g~~~Yl~Wi~~~~~ 101 (102)
T 1uku_A 81 IRIDVDDVNEDYLKWLIEETK 101 (102)
T ss_dssp EEEECSCCCHHHHHHHHHHSC
T ss_pred EEEECcCCCHHHHHHHHHhcC
Confidence 999999999999999999886
No 10
>1p1l_A CUTA, periplasmic divalent cation tolerance protein CUT; NYSGXRC, PSI, protein structure initiative; 2.00A {Archaeoglobus fulgidus} SCOP: d.58.5.2
Probab=100.00 E-value=3.5e-48 Score=266.55 Aligned_cols=101 Identities=35% Similarity=0.718 Sum_probs=98.9
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcce
Q 033773 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 89 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~Pe 89 (112)
+++|+||+||.++|++|||.||++|||||+|+.| |+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+||
T Consensus 2 ~~~V~~T~p~~~~A~~ia~~Lve~rLAACvni~p-i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevPe 80 (102)
T 1p1l_A 2 HNFIYITAPSLEEAERIAKRLLEKKLAACVNIFP-IKSFFWWEGKIEAATEFAMIVKTRSEKFAEVRDEVKAMHSYTTPC 80 (102)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSCC
T ss_pred EEEEEEecCCHHHHHHHHHHHHhCCeEEEEEecc-ceEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 6899999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHHHHHhhcC
Q 033773 90 VIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 90 Ii~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
|+++|+.+|+++|++|+.++++
T Consensus 81 Ii~lpi~~g~~~Yl~Wi~~~~~ 102 (102)
T 1p1l_A 81 ICAIPIERGLKEFLDWIDETVE 102 (102)
T ss_dssp EEEEECCCCCHHHHHHHHHHHC
T ss_pred EEEEEccCCCHHHHHHHHHhcC
Confidence 9999999999999999999864
No 11
>1kr4_A Protein TM1056, CUTA; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.40A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=6.9e-48 Score=273.44 Aligned_cols=103 Identities=33% Similarity=0.577 Sum_probs=100.7
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcc
Q 033773 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVP 88 (112)
Q Consensus 9 ~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~P 88 (112)
++++|+||+||.++|++||+.||++|||||||++| |+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+|
T Consensus 22 ~~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p-i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~L~~~I~e~HpYevP 100 (125)
T 1kr4_A 22 HMILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETP 100 (125)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred ccEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecc-ceEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 57999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHHHHHhhcCC
Q 033773 89 EVIALPITGGSQPYLEWLKSSTRD 112 (112)
Q Consensus 89 eIi~~~i~~~~~~Yl~Wi~~~~~~ 112 (112)
||+++|+.+|+++|++||.+++++
T Consensus 101 eIi~lpi~~g~~~YL~Wi~~~t~~ 124 (125)
T 1kr4_A 101 AIFTLKVENILTEYMNWLRESVLG 124 (125)
T ss_dssp CEEEECCCCEEHHHHHHHHHHTSC
T ss_pred EEEEEEccCCCHHHHHHHHHhccC
Confidence 999999999999999999999864
No 12
>1o5j_A Periplasmic divalent cation tolerance protein; TM1056, struc genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=1.7e-47 Score=267.38 Aligned_cols=100 Identities=34% Similarity=0.609 Sum_probs=98.3
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcce
Q 033773 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 89 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~Pe 89 (112)
+++|+||+||+++|++|||.||++|||||||+.| |+|+|+|+|+|++++|++|++||+.+++++|+++|+++||||+||
T Consensus 13 ~~lV~tT~p~~e~A~~iA~~Lve~rLAACvni~p-i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~L~~~I~~~HpYevPe 91 (113)
T 1o5j_A 13 MILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPA 91 (113)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSCC
T ss_pred EEEEEEecCCHHHHHHHHHHHHhCCeEEEEEEcc-ccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 6999999999999999999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHHHHHhhc
Q 033773 90 VIALPITGGSQPYLEWLKSST 110 (112)
Q Consensus 90 Ii~~~i~~~~~~Yl~Wi~~~~ 110 (112)
|+++|+.+|+++|++|+.+++
T Consensus 92 Ii~lpi~~g~~~Yl~Wi~~~~ 112 (113)
T 1o5j_A 92 IFTLKVENVLTEYMNWLRESV 112 (113)
T ss_dssp EEEEECCCCCHHHHHHHHHHH
T ss_pred EEEEEccCCCHHHHHHHHHhc
Confidence 999999999999999999875
No 13
>1osc_A Similar to divalent cation tolerant protein CUTA; copper resistance, structural proteomics in europe, spine, structural genomics; 2.15A {Rattus norvegicus} SCOP: d.58.5.2
Probab=100.00 E-value=4.3e-47 Score=269.65 Aligned_cols=104 Identities=47% Similarity=0.881 Sum_probs=101.4
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcc
Q 033773 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVP 88 (112)
Q Consensus 9 ~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~P 88 (112)
.+++|+||+||+++|++||+.||++|||||+|+.|+|+|+|+|+|+|++++|++|+|||+.+++++|+++|+++||||+|
T Consensus 22 ~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 101 (126)
T 1osc_A 22 SVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVA 101 (126)
T ss_dssp SEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHTTCSSSSC
T ss_pred ceEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 47999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHHHHHhhcCC
Q 033773 89 EVIALPITGGSQPYLEWLKSSTRD 112 (112)
Q Consensus 89 eIi~~~i~~~~~~Yl~Wi~~~~~~ 112 (112)
||+++|+.+|+++|++||.+++++
T Consensus 102 eIi~lpi~~g~~~Yl~Wi~~~t~~ 125 (126)
T 1osc_A 102 EVIALPVEQGNPPYLHWVHQVTES 125 (126)
T ss_dssp CEEEEEECEECHHHHHHHHHHHCC
T ss_pred EEEEEEcccCCHHHHHHHHHHhcc
Confidence 999999999999999999998863
No 14
>2zfh_A CUTA; human brain, trimeric structure, structural genomics; 2.05A {Homo sapiens} SCOP: d.58.5.2 PDB: 1xk8_A
Probab=100.00 E-value=3.4e-46 Score=277.36 Aligned_cols=104 Identities=46% Similarity=0.869 Sum_probs=101.2
Q ss_pred CCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCc
Q 033773 8 VPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDV 87 (112)
Q Consensus 8 ~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~ 87 (112)
..+++|+||+||+++|++|||.||++||||||||+|+|+|+|+|+|+|++++|+.|+|||+.+++++|+++|+++||||+
T Consensus 66 ~~~ilV~tT~pd~e~A~~IAr~LVE~rLAACVNI~P~I~SiY~WeGkIeed~Ev~LiIKT~~~~~~~L~~~I~elHPYEv 145 (179)
T 2zfh_A 66 GSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEV 145 (179)
T ss_dssp TSEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSS
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEECCeeeeceEEEEEEEECHHHHHHHHHHHHHHCCCcC
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCHhHHHHHHhhcC
Q 033773 88 PEVIALPITGGSQPYLEWLKSSTR 111 (112)
Q Consensus 88 PeIi~~~i~~~~~~Yl~Wi~~~~~ 111 (112)
|||+++|+.+|+++|++||.++++
T Consensus 146 PEIIalPI~~G~~~YL~WI~e~t~ 169 (179)
T 2zfh_A 146 AEVIALPVEQGNFPYLQWVRQVTE 169 (179)
T ss_dssp CCEEEEEECEECHHHHHHHHHTTC
T ss_pred CEEEEEEccCCCHHHHHHHHHHcC
Confidence 999999999999999999999875
No 15
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=96.07 E-value=0.037 Score=44.98 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhcccc------ceEeecCCceEEEee----------CCeeccCceEEEEEEeccccHHHHHHHHHhhC
Q 033773 20 KEAGKKLAESIVKAKLA------ACVNRVPGIESVYEW----------KGEIQTDAEELLIIKTRQSLLETLTEHVKANH 83 (112)
Q Consensus 20 ~e~A~~ia~~lve~rLa------ACvni~~~v~S~Y~W----------~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~H 83 (112)
.+.|+++.++|-+.+-. -|.--.+ -+.-|+- .|+++..+|+++.+-.......++.+.+++.|
T Consensus 170 ~~~~~~v~~al~~aGag~ig~y~~csf~~~-G~G~F~p~~~a~P~iG~~g~~~~v~e~rie~i~p~~~~~~v~~al~~~H 248 (397)
T 2gx8_A 170 VTHAEEVRKALGDAGAGHIGNYSHCTFSSE-GTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAH 248 (397)
T ss_dssp HHHHHHHHHHHHHTTTTCBTTEEEEEEEEE-EEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHS
T ss_pred chhhHHHHHHhhhccccccccccccccccc-cceeeccccCCCCccCCcCcccccceeEEEEEecHHHHHHHHHHHHHhC
Confidence 57789999999886532 2443333 3555655 48999999999999999999999999999999
Q ss_pred CCCcceEEEEec
Q 033773 84 EYDVPEVIALPI 95 (112)
Q Consensus 84 pYe~PeIi~~~i 95 (112)
|||.|..-..|+
T Consensus 249 Pyee~ayd~~~l 260 (397)
T 2gx8_A 249 PYEEVAYDVYPL 260 (397)
T ss_dssp SSSSCCEEEEEE
T ss_pred Cccccccccccc
Confidence 999997555544
No 16
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=94.77 E-value=0.0074 Score=48.65 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=22.7
Q ss_pred CCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcceEEEEe
Q 033773 52 KGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALP 94 (112)
Q Consensus 52 ~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~PeIi~~~ 94 (112)
.|+++..+|+++.+=.......++.+.+++.||||.|..-.+|
T Consensus 191 ~g~~~~v~e~rie~i~~~~~~~~v~~al~~~hpyee~ayd~~~ 233 (370)
T 2nyd_A 191 IDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIE 233 (370)
T ss_dssp ------------CEEECSTHHHHHHHHHCC-----CCCCCEEE
T ss_pred ccccccccceEEEEEechhhHHHHHHHHHhhCCcccccccccc
Confidence 4899999999999999999999999999999999999754443
No 17
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=79.40 E-value=1.9 Score=29.19 Aligned_cols=38 Identities=11% Similarity=0.194 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHhccccceEe---------------ecCCceEEEeeCCe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN---------------RVPGIESVYEWKGE 54 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn---------------i~~~v~S~Y~W~g~ 54 (112)
+.|+++|.++++.|++.++.-.|. ....=.++|++...
T Consensus 53 ~~sR~eAv~lgq~Ll~~G~i~hV~~~s~~~~~~~~~~~~f~d~~~~lYrF~~~ 105 (120)
T 1v3f_A 53 AASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFAES 105 (120)
T ss_dssp CSSHHHHHHHHHHHHHHTSEEECSSSSCSSCCCSSCCCCCCCSSSCEEEECSS
T ss_pred CCCHHHHHHHHHHHHHCCCeEEccccccccccccccccceecCCccEEEeChh
Confidence 578999999999999999999886 12211378999765
No 18
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=74.68 E-value=3 Score=28.75 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHHHHhccccceE--------------eecCCceEEEeeCC
Q 033773 17 VPNKEAGKKLAESIVKAKLAACV--------------NRVPGIESVYEWKG 53 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACv--------------ni~~~v~S~Y~W~g 53 (112)
+.|+++|..+++.|++.++.-++ +...+=.++|++..
T Consensus 63 ~~sR~EAv~lg~~Ll~~G~i~hV~d~s~~~~~~~~~~~f~dd~~~lYrF~~ 113 (127)
T 2cso_A 63 VRNRQEGLMIASSLLNEGYLQPAGDMSKSAVDGTAENPFLDNPDAFYYFPD 113 (127)
T ss_dssp CSSHHHHHHHHHHHHHHTSSEEESHHHHHHHHSSCSCCCCCCTTCEEECSS
T ss_pred CCCHHHHHHHHHHHHHCCeEEeCccccccccccccccceecCCCcEEEecC
Confidence 46899999999999999999999 22332368999864
No 19
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.07 E-value=3.2 Score=27.41 Aligned_cols=24 Identities=8% Similarity=0.149 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN 40 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn 40 (112)
+.|+++|.++++.|++.++.-.|.
T Consensus 63 ~~sR~eAv~lgq~Ll~~gvi~hV~ 86 (105)
T 2ysr_A 63 EVTRQQTIQLLRKFLKNHVIEDIK 86 (105)
T ss_dssp TCCHHHHHHHHHHHHHTTSSEESS
T ss_pred cCCHHHHHHHHHHHHHCCCeEecc
Confidence 468999999999999999999884
No 20
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=66.90 E-value=3.9 Score=27.47 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN 40 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn 40 (112)
+.|+++|..+++.|++.++.-+|.
T Consensus 53 ~~~R~EAv~lgq~Ll~~G~i~hV~ 76 (109)
T 1uhw_A 53 VRNRQEGLMISASLLSEGYLQPAG 76 (109)
T ss_dssp SSSHHHHHHHHHHHHHHTSSEECS
T ss_pred CCCHHHHHHHHHHHHHCCeEEeCc
Confidence 568999999999999999999993
No 21
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31
Probab=65.99 E-value=3.6 Score=27.10 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN 40 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn 40 (112)
+.|+++|..+|+.|++.++.-+|.
T Consensus 67 ~~~r~eAv~lg~~Ll~~G~I~hv~ 90 (105)
T 1fsh_A 67 FKERREARKYASSMLKHGFLRHTV 90 (105)
T ss_dssp CSSHHHHHHHHHHHHHTTTEECSS
T ss_pred CCCHHHHHHHHHHHHHCCcEEEcC
Confidence 478999999999999999998873
No 22
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=57.61 E-value=6 Score=25.37 Aligned_cols=79 Identities=8% Similarity=0.142 Sum_probs=41.5
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeec-----cCceEEEEEEeccccHHHH
Q 033773 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQ-----TDAEELLIIKTRQSLLETL 75 (112)
Q Consensus 1 ~~~~~~~~~~~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~-----~~~E~~l~~KT~~~~~~~l 75 (112)
|..+++.|-.-+|+.++.+...++++ .-+.++|.+..+.+|+|.|+- |--... .+.-+-..+-+.=+..+.+
T Consensus 1 m~~~~~~mi~HiVlfklk~~~~~~~~--~~~~~~l~~L~~~ip~i~~~~-~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l 77 (108)
T 1tr0_A 1 MATRTPKLVKHTLLTRFKDEITREQI--DNYINDYTNLLDLIPSMKSFN-WGTDLGMESAELNRGYTHAFESTFESKSGL 77 (108)
T ss_dssp --CCCCCCEEEEEEEEECTTCCHHHH--HHHHHHHHHHHHHCTTCCEEE-EEECCSCSCTTTTTTCCEEEEEEESSHHHH
T ss_pred CCCCCCCcEEEEEEEEECCCCCHHHH--HHHHHHHHHHhhcCCceEEEE-EccCCCccccccCCCccEEEEEEECCHHHH
Confidence 66666656567777777755434443 333444566665578899864 321111 1223555555555555666
Q ss_pred HHHHHhhCC
Q 033773 76 TEHVKANHE 84 (112)
Q Consensus 76 ~~~I~~~Hp 84 (112)
..... ||
T Consensus 78 ~~Y~~--hP 84 (108)
T 1tr0_A 78 QEYLD--SA 84 (108)
T ss_dssp HHHHT--CH
T ss_pred HHHhC--CH
Confidence 65543 55
No 23
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=52.76 E-value=25 Score=20.86 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=20.8
Q ss_pred CCeEEEEEeCCCHHHHHHHHHHHHh
Q 033773 8 VPSIVVYVTVPNKEAGKKLAESIVK 32 (112)
Q Consensus 8 ~~~~~v~tT~ps~e~A~~ia~~lve 32 (112)
|..+-+.+|.....+|++.|..|++
T Consensus 1 mervrisitartkkeaekfaailik 25 (62)
T 2gjh_A 1 MERVRISITARTKKEAEKFAAILIK 25 (62)
T ss_dssp -CEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CceEEEEEEecchhHHHHHHHHHHH
Confidence 3457788999999999999998875
No 24
>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B
Probab=45.58 E-value=15 Score=28.62 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=16.3
Q ss_pred cCCceEEEeeCCeeccCceEEEEEEe
Q 033773 42 VPGIESVYEWKGEIQTDAEELLIIKT 67 (112)
Q Consensus 42 ~~~v~S~Y~W~g~i~~~~E~~l~~KT 67 (112)
-++|.|+|.|+ ++.+-=-.++||=
T Consensus 113 eGGvSSVYlWd--ld~gFagvvLiKK 136 (277)
T 3lk4_B 113 EGGVSSVYLWD--LDHGFAGVILIKK 136 (277)
T ss_dssp SSSEEEEEEEE--ETTEEEEEEEEEE
T ss_pred CCCeeEEEEEe--cCCCeEEEEEEEe
Confidence 35799999996 4555444566663
No 25
>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum}
Probab=43.77 E-value=16 Score=28.56 Aligned_cols=24 Identities=25% Similarity=0.657 Sum_probs=16.9
Q ss_pred cCCceEEEeeCCeeccCceEEEEEEe
Q 033773 42 VPGIESVYEWKGEIQTDAEELLIIKT 67 (112)
Q Consensus 42 ~~~v~S~Y~W~g~i~~~~E~~l~~KT 67 (112)
-++|.|+|.|+ +..+-=-.++||=
T Consensus 131 eGGvSSVYlWd--ld~gFagvvLiKK 154 (290)
T 4akr_B 131 EGGVSSVYCWD--LDDNFAAVVLMKK 154 (290)
T ss_dssp SSSEEEEEEEE--ETTEEEEEEEEEE
T ss_pred cCCeeEEEEEe--cCCCceEEEEEEe
Confidence 35799999996 5555556666663
No 26
>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B
Probab=34.99 E-value=31 Score=26.29 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=15.6
Q ss_pred cCCceEEEeeCCeeccCceEEEEEEe
Q 033773 42 VPGIESVYEWKGEIQTDAEELLIIKT 67 (112)
Q Consensus 42 ~~~v~S~Y~W~g~i~~~~E~~l~~KT 67 (112)
-++|.|+|.|+ +.++-=-.++||=
T Consensus 113 eGGvSSVYlWd--ld~gFag~vLiKK 136 (244)
T 3aa0_B 113 EGGVSSVYLWD--LDHGFAGVILIKK 136 (244)
T ss_dssp SSSEEEEEEEE--ETTEEEEEEEEEE
T ss_pred CCCcceEEEEe--cCCCceEEEEEEe
Confidence 35699999995 4455444555553
No 27
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.31 E-value=52 Score=19.78 Aligned_cols=32 Identities=13% Similarity=0.185 Sum_probs=26.2
Q ss_pred ceEEEEEEeccccHHHHHHHHHhhCCCCcceEEEE
Q 033773 59 AEELLIIKTRQSLLETLTEHVKANHEYDVPEVIAL 93 (112)
Q Consensus 59 ~E~~l~~KT~~~~~~~l~~~I~~~HpYe~PeIi~~ 93 (112)
.+..+++||.+..-+.+...|-+.+ .|+|+..
T Consensus 12 ~~n~vVikT~pG~A~~va~~iD~~~---~~eI~GT 43 (71)
T 1b4b_A 12 TGNLLVLRTLPGNAHAIGVLLDNLD---WDEIVGT 43 (71)
T ss_dssp ETTEEEEEESTTCHHHHHHHHHHHC---CTTEEEE
T ss_pred cCCEEEEEeCCCcHHHHHHHHHhCC---CCCeEEE
Confidence 5678999999999999988888775 5667654
No 28
>3jtn_A YPBH, adapter protein MECA 2; adaptor protein, competence, sporulation, protein binding; 2.09A {Bacillus subtilis} PDB: 3jto_A
Probab=30.90 E-value=49 Score=20.67 Aligned_cols=55 Identities=16% Similarity=0.173 Sum_probs=33.8
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEE-eccccHHHHHHHHHh
Q 033773 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIK-TRQSLLETLTEHVKA 81 (112)
Q Consensus 13 v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~K-T~~~~~~~l~~~I~~ 81 (112)
+...++|.|+.-++|+.+-.. ...-.++|.++|+ +-|.+. ...+.-+.+.+.+.|
T Consensus 3 ~i~~F~~~edvI~~a~~l~~~--------~~~~s~LYk~~~~------YYL~l~~~~~~~~~~~~a~l~E 58 (91)
T 3jtn_A 3 IIYQFHSFEDIIQLSESLQRI--------GITGGTVYHYDGQ------YFLSLEDLGSHTAEGVVAVLAE 58 (91)
T ss_dssp EEEEESSHHHHHHHHHHHHHT--------TCCCCEEEEETTE------EEEEECCCTTCCHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHcccc--------CCCCceeEEECCE------EEEEEeeCCCChHHHHHHHHHH
Confidence 456789999999999987321 2346899998776 445543 211111555555544
No 29
>3ts9_A Interferon-induced helicase C domain-containing P; helix bundle, fancm helicase, super family 2 helicase, SF2 H DEXD/H helicase; 2.00A {Mus musculus}
Probab=26.87 E-value=31 Score=24.14 Aligned_cols=16 Identities=25% Similarity=0.349 Sum_probs=13.3
Q ss_pred ecCCCCHhHHHHHHhh
Q 033773 94 PITGGSQPYLEWLKSS 109 (112)
Q Consensus 94 ~i~~~~~~Yl~Wi~~~ 109 (112)
+-+.|++.|.+||.+-
T Consensus 30 ~~dfGTQ~YEQwvV~~ 45 (138)
T 3ts9_A 30 MSDFGTQHYEQWAIQM 45 (138)
T ss_dssp SSCTTSHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHH
Confidence 5678999999998763
No 30
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=26.84 E-value=90 Score=18.41 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=26.8
Q ss_pred EEEEEEeccccHHHHHHHHHhhCCCCcceEEEEecCCCCHhH
Q 033773 61 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPY 102 (112)
Q Consensus 61 ~~l~~KT~~~~~~~l~~~I~~~HpYe~PeIi~~~i~~~~~~Y 102 (112)
..+.+++.....+++.+.|++ .|+|...-...|..+|
T Consensus 4 A~v~v~~~~~~~~~~~~~l~~-----~peV~e~~~vtG~~D~ 40 (83)
T 2cvi_A 4 AFILMVTAAGKEREVMEKLLA-----MPEVKEAYVVYGEYDL 40 (83)
T ss_dssp EEEEEEECTTCHHHHHHHHHT-----STTEEEEEECBSSCSE
T ss_pred EEEEEEEcCCCHHHHHHHHhC-----CCCeeEEEEEcccCCE
Confidence 456778888888888888875 5788777666666544
No 31
>2v3s_A Serine/threonine-protein kinase OSR1; ATP-binding, magnesium, metal-binding, nucleotide-binding, phosphorylation, polymorphism, transferase; 1.70A {Homo sapiens}
Probab=26.65 E-value=19 Score=23.83 Aligned_cols=24 Identities=13% Similarity=0.400 Sum_probs=20.0
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN 40 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn 40 (112)
.+.++.|+-||+.||..+|+-+.-
T Consensus 24 ~~g~DTaegiA~ELv~AgLVDg~D 47 (96)
T 2v3s_A 24 TPGRDTAEGVSQELISAGLVDGRD 47 (96)
T ss_dssp CTTTCCHHHHHHHHHHTTSSCGGG
T ss_pred ecCCCcHHHHHHHHHHCCCccccc
Confidence 466789999999999999986543
No 32
>2ixm_A Serine/threonine-protein phosphatase 2A regulatory subunit B'; 2 PTPA, ppiase, hydrolase activator; 1.5A {Homo sapiens} SCOP: a.268.1.1 PDB: 2hv6_A 2hv7_A* 2g62_A
Probab=26.54 E-value=55 Score=25.55 Aligned_cols=38 Identities=26% Similarity=0.451 Sum_probs=30.1
Q ss_pred EEeccccHHHHHHHHHhhCCCCcceEEEEecCCCCHhHHHHHHh
Q 033773 65 IKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKS 108 (112)
Q Consensus 65 ~KT~~~~~~~l~~~I~~~HpYe~PeIi~~~i~~~~~~Yl~Wi~~ 108 (112)
++..-+.++.|.+.|.+..|=+-| -..||.+|..|.+.
T Consensus 55 v~~l~~iL~~l~~~i~e~PP~~~p------~RFGN~AfR~w~~~ 92 (303)
T 2ixm_A 55 IEKLLALLNTLDRWIDETPPVDQP------SRFGNKAYRTWYAK 92 (303)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCCS------CSSSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC------CCcCChHHHHHHHH
Confidence 444567788899999998887654 58999999999764
No 33
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=25.80 E-value=36 Score=27.03 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVN 40 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvn 40 (112)
+.|+++|..+++.|++.++.-+|.
T Consensus 55 ~~~R~eA~~~g~~Ll~~G~i~hv~ 78 (385)
T 3ml6_A 55 FPERREARKYASGLLKAGLIRHTV 78 (385)
T ss_dssp CSSHHHHHHHHHHHHHHSSEEESS
T ss_pred CCCHHHHHHHHHHHHhCCcEEEcC
Confidence 478999999999999999998875
No 34
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=25.29 E-value=1.9e+02 Score=20.65 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeeccCceEEEEEEeccccHHHHHHHHHhhCCCCcc
Q 033773 17 VPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVP 88 (112)
Q Consensus 17 ~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe~P 88 (112)
-=+.+.|++|.+.+=+.+|=.=++| +++++++.-|.+.++ +++++.|++. -|++|
T Consensus 101 GI~~e~AKkIvK~IKdsklKVqa~I---------------QGd~vRVtgKkrDDL-Q~viallk~~-d~~~p 155 (163)
T 1in0_A 101 GIETEMAKKITKLVKDSKIKVQTQI---------------QGEQVRVTGKSRDDL-QAVIQLVKSA-ELGQP 155 (163)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEE---------------ETTEEEEEESCHHHH-HHHHHHHHHS-CCSSC
T ss_pred ccCHHHHHHHHHHHHhcCCcceeEe---------------cCcEEEEecCCHHHH-HHHHHHHHhc-CCCCC
Confidence 3478999999999999999855554 356888888887774 7788888864 56666
No 35
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=24.66 E-value=1.5e+02 Score=19.34 Aligned_cols=40 Identities=25% Similarity=0.263 Sum_probs=33.0
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeC
Q 033773 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWK 52 (112)
Q Consensus 13 v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~ 52 (112)
|-+--.+.++.+++|..|-++==+.+||+++.+--+|+-.
T Consensus 48 Vkvl~~~~~d~~e~a~~la~~t~a~vVq~IG~~~VLYR~~ 87 (104)
T 1rq8_A 48 VHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRES 87 (104)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHTEEEEEEETTEEEEEECC
T ss_pred EEEeCCCHHHHHHHHHHHHHHhCCEEEEEECCEEEEEeCC
Confidence 4444466889999999999988899999999988888843
No 36
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=24.51 E-value=64 Score=19.96 Aligned_cols=33 Identities=27% Similarity=0.110 Sum_probs=23.3
Q ss_pred eEEEEEeCCCHHHHHHHHHHH--HhccccceEeec
Q 033773 10 SIVVYVTVPNKEAGKKLAESI--VKAKLAACVNRV 42 (112)
Q Consensus 10 ~~~v~tT~ps~e~A~~ia~~l--ve~rLaACvni~ 42 (112)
--++++-++|.++|+++++.- +..++.+-+.|.
T Consensus 61 Gg~~i~~a~s~eea~~~~~~dP~~~~G~~~~~eVr 95 (101)
T 1mwq_A 61 GSTVIAQFENLQAAKDWAAQDPYVEAGVYADVIVK 95 (101)
T ss_dssp EEEEEEECSSHHHHHHHHHTCHHHHTTCEEEEEEE
T ss_pred eEEEEEEeCCHHHHHHHHHhCChhhcCCcceEEEE
Confidence 467778999999999999864 444554444444
No 37
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=23.40 E-value=57 Score=26.36 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHhccccceEeec-----CCceEEEeeCC
Q 033773 19 NKEAGKKLAESIVKAKLAACVNRV-----PGIESVYEWKG 53 (112)
Q Consensus 19 s~e~A~~ia~~lve~rLaACvni~-----~~v~S~Y~W~g 53 (112)
+.+||..+|..|++.++.-+++=. ..=.+.|+.+.
T Consensus 68 ~~~EA~~lg~~L~~~Gyi~~v~d~~~~~fk~d~~~Yrfq~ 107 (424)
T 2pbi_A 68 SNLEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQT 107 (424)
T ss_dssp CHHHHHHHHHHHHHTTSEEESSSTTCCSCCSSSCEEEECC
T ss_pred ChHHHHHHHHHHHHCCCEEeCCccccccccCCCeeEEeCC
Confidence 448999999999999999999542 11368898874
No 38
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=22.59 E-value=1.1e+02 Score=19.53 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=19.9
Q ss_pred CCeEEEEEeCCCHHHHHHHHHHHHh
Q 033773 8 VPSIVVYVTVPNKEAGKKLAESIVK 32 (112)
Q Consensus 8 ~~~~~v~tT~ps~e~A~~ia~~lve 32 (112)
.|...+-++++|.+.|++.-+..++
T Consensus 51 aP~Y~i~~~~~D~k~ge~~L~~ai~ 75 (93)
T 2qn6_B 51 APRYRVDVVGTNPKEASEALNQIIS 75 (93)
T ss_dssp TTEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCHHHHHHHHHHHHH
Confidence 3568899999999999887766644
No 39
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=21.56 E-value=29 Score=21.42 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=19.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhccc
Q 033773 13 VYVTVPNKEAGKKLAESIVKAKL 35 (112)
Q Consensus 13 v~tT~ps~e~A~~ia~~lve~rL 35 (112)
||..+.|.++|.++-+.|..++-
T Consensus 37 if~~~~d~~eA~e~~~~lqa~~~ 59 (71)
T 1gh9_A 37 IFGRADDFEEASELVRKLQEEKY 59 (71)
T ss_dssp CBSCCSSHHHHHHHHHHHSSCCC
T ss_pred EEEecCCHHHHHHHHHHHHhhhc
Confidence 45568999999999999988863
No 40
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=21.33 E-value=1.5e+02 Score=21.87 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=33.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEe
Q 033773 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYE 50 (112)
Q Consensus 13 v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~ 50 (112)
+++.+++.+....++++|-++.+.+=+.+.|..+|+..
T Consensus 32 llve~~~~~~v~al~~~L~~~~~~gv~e~vP~~~SllV 69 (228)
T 3mml_B 32 LLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLV 69 (228)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCTTEEEEEECSSEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCcEEeeccccEEEE
Confidence 56678888889999999999999999999999999854
No 41
>2ixn_A Serine/threonine-protein phosphatase 2A activator; PP2A phosphatase activator prolyl isomerase PTPA, isomerase; 2.8A {Saccharomyces cerevisiae} SCOP: a.268.1.1
Probab=21.25 E-value=59 Score=25.46 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=26.1
Q ss_pred EEeccccHHHHHHHHHhhCCC-CcceEEEEecCCCCHhHHHHHHh
Q 033773 65 IKTRQSLLETLTEHVKANHEY-DVPEVIALPITGGSQPYLEWLKS 108 (112)
Q Consensus 65 ~KT~~~~~~~l~~~I~~~HpY-e~PeIi~~~i~~~~~~Yl~Wi~~ 108 (112)
++..-+.++.|.+.|.+..|= |- -|-..||.+|..|.+.
T Consensus 52 v~~l~~iL~~l~~~ide~PP~~~~-----~~~RFGN~AfR~w~~~ 91 (310)
T 2ixn_A 52 INSMMNLLSQIKDITQKHPVIKDA-----DSSRFGKVEFRDFYDE 91 (310)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCC----------CCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCCCHHHHHHHHH
Confidence 344456678888888888774 33 1448899999999754
No 42
>2lqj_A Mg2+ transport protein; ACT domain, membrane protein, regulation, HYDR; NMR {Mycobacterium tuberculosis}
Probab=21.04 E-value=1.7e+02 Score=18.50 Aligned_cols=64 Identities=8% Similarity=0.025 Sum_probs=42.3
Q ss_pred EEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEeeCCeecc-CceEEEEEEeccccHHHHHHHHHh
Q 033773 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQT-DAEELLIIKTRQSLLETLTEHVKA 81 (112)
Q Consensus 11 ~~v~tT~ps~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~g~i~~-~~E~~l~~KT~~~~~~~l~~~I~~ 81 (112)
..|+++|+. +++.-.|.||-+.|- ..++ | ++|+.- ..+.. .-|+...+-++...-++|.+.+..
T Consensus 9 Y~v~Vic~~--~~e~~vR~lL~~~L~-~~~~-~-l~~l~s--~~~~~~~veI~A~L~at~~~~~~Le~iv~r 73 (94)
T 2lqj_A 9 YQVRVICRP--KAETYVRAHIVQRTS-SNDI-T-LRGIRT--GPAGDDNITLTAHLLMVGHTPAKLERLVAE 73 (94)
T ss_dssp EEEEEEECH--HHHHHHHHHHHHHHH-HHTE-E-EEEEEE--EECSSSCEEEEEEEEEESCCHHHHHHHHHH
T ss_pred EEEEEEECc--HHHHHHHHHHHHHHh-cCCC-c-eeEeee--ecCCCCeEEEEEEEEecCCCHHHHHHHHHH
Confidence 678888884 466778999999995 4555 3 788873 33222 256677777776666666665543
No 43
>1oao_C CODH, carbon monoxide dehydrogenase/acetyl-COA synthase alpha; oxidoreductase-transferase complex, electron transfer, oxidoreductase; 1.90A {Moorella thermoacetica} SCOP: e.26.1.3 PDB: 2z8y_M 3i01_M 3i04_M 1mjg_M 1ru3_A 3git_A 3s2x_A
Probab=20.59 E-value=1.4e+02 Score=26.20 Aligned_cols=31 Identities=6% Similarity=0.136 Sum_probs=25.5
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceE
Q 033773 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACV 39 (112)
Q Consensus 9 ~~~~v~tT~ps~e~A~~ia~~lve~rLaACv 39 (112)
+.+++.=..||.++|.+|++.+.++++..+.
T Consensus 155 GvavIvG~a~d~e~aa~I~~e~q~r~~lvfl 185 (729)
T 1oao_C 155 GEAIILGRAKDSKALAKIVKELMGMGFMLFI 185 (729)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 3566666677999999999999999998774
No 44
>3aqb_A Component A of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_A*
Probab=20.21 E-value=24 Score=24.96 Aligned_cols=23 Identities=4% Similarity=-0.005 Sum_probs=18.6
Q ss_pred EEeccccHHHHHHHHHhhCCCCc
Q 033773 65 IKTRQSLLETLTEHVKANHEYDV 87 (112)
Q Consensus 65 ~KT~~~~~~~l~~~I~~~HpYe~ 87 (112)
++|.+..-.+++++++..|||+-
T Consensus 5 ~~tla~Lk~QIe~kL~~~h~Yl~ 27 (147)
T 3aqb_A 5 MRYLHKIELELNRLTSRYPFFKK 27 (147)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCChHHH
Confidence 45666777899999999999964
Done!