Query 033778
Match_columns 112
No_of_seqs 181 out of 1079
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 10:03:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033778.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033778hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yat_A FK506 binding protein; 100.0 2.7E-32 9.3E-37 164.7 13.6 107 1-112 6-113 (113)
2 2ppn_A FK506-binding protein 1 100.0 2E-32 6.7E-37 163.8 12.2 106 2-112 1-107 (107)
3 3kz7_A FK506-binding protein 3 100.0 4.1E-32 1.4E-36 165.2 13.1 108 2-112 5-119 (119)
4 3o5e_A Peptidyl-prolyl CIS-tra 100.0 1.1E-31 3.7E-36 168.3 12.5 106 2-112 36-142 (144)
5 3o5q_A Peptidyl-prolyl CIS-tra 100.0 8.6E-32 2.9E-36 165.7 11.7 106 2-112 20-126 (128)
6 2y78_A Peptidyl-prolyl CIS-tra 100.0 2.3E-31 7.8E-36 164.8 13.0 106 1-111 28-133 (133)
7 2lgo_A FKBP; infectious diseas 100.0 3.4E-31 1.2E-35 163.4 12.1 106 1-111 22-130 (130)
8 4dip_A Peptidyl-prolyl CIS-tra 100.0 6.4E-31 2.2E-35 161.2 11.3 106 2-112 13-122 (125)
9 3b7x_A FK506-binding protein 6 100.0 1.8E-31 6.1E-36 165.5 8.6 107 1-112 26-133 (134)
10 1r9h_A FKB-6, FK506 binding pr 100.0 1.8E-30 6.3E-35 161.1 11.7 107 1-112 14-121 (135)
11 3oe2_A Peptidyl-prolyl CIS-tra 100.0 1.9E-30 6.4E-35 171.7 12.0 101 2-112 118-218 (219)
12 3uf8_A Ubiquitin-like protein 100.0 2.7E-30 9.3E-35 170.5 12.7 106 1-111 104-209 (209)
13 1jvw_A Macrophage infectivity 100.0 1.2E-30 4.2E-35 166.8 9.7 105 1-112 37-142 (167)
14 2vn1_A 70 kDa peptidylprolyl i 100.0 9.7E-30 3.3E-34 156.7 12.6 105 3-112 18-126 (129)
15 2awg_A 38 kDa FK-506 binding p 100.0 1.2E-29 4.2E-34 154.1 12.3 101 3-112 15-117 (118)
16 2f4e_A ATFKBP42; FKBP-like, al 100.0 2.1E-29 7.3E-34 162.9 13.9 108 1-112 49-159 (180)
17 1fd9_A Protein (macrophage inf 100.0 6.7E-30 2.3E-34 168.8 11.6 105 1-112 106-210 (213)
18 2lkn_A AH receptor-interacting 100.0 2.1E-30 7.3E-35 164.9 8.3 83 1-87 10-96 (165)
19 2jwx_A FKBP38NTD, FK506-bindin 100.0 1.6E-29 5.5E-34 160.1 12.2 102 2-112 43-148 (157)
20 1u79_A FKBP-type peptidyl-prol 100.0 2.4E-30 8.3E-35 159.4 8.1 106 1-111 12-128 (129)
21 1q6h_A FKBP-type peptidyl-prol 100.0 3.9E-29 1.3E-33 166.2 12.6 104 1-112 121-224 (224)
22 2d9f_A FK506-binding protein 8 100.0 8.2E-29 2.8E-33 153.6 10.6 101 3-112 19-122 (135)
23 2pbc_A FK506-binding protein 2 100.0 5.4E-28 1.8E-32 143.4 10.9 95 13-112 3-97 (102)
24 1q1c_A FK506-binding protein 4 100.0 2.1E-27 7.3E-32 162.6 13.8 107 1-112 51-158 (280)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.1E-26 3.9E-31 167.4 9.9 106 1-111 31-137 (457)
26 3jxv_A 70 kDa peptidyl-prolyl 99.9 9.4E-26 3.2E-30 158.9 12.7 107 2-112 245-354 (356)
27 3jxv_A 70 kDa peptidyl-prolyl 99.9 4.7E-28 1.6E-32 170.6 0.2 107 1-112 11-118 (356)
28 2if4_A ATFKBP42; FKBP-like, al 99.9 3.9E-25 1.3E-29 154.1 10.5 107 1-111 49-158 (338)
29 1q1c_A FK506-binding protein 4 99.9 3.1E-24 1.1E-28 146.9 12.1 102 1-112 168-273 (280)
30 1hxv_A Trigger factor; FKBP fo 99.9 3.8E-22 1.3E-26 120.1 8.6 87 13-112 27-113 (113)
31 4dt4_A FKBP-type 16 kDa peptid 99.8 1.6E-20 5.4E-25 119.9 8.5 72 15-90 24-95 (169)
32 3pr9_A FKBP-type peptidyl-prol 99.8 2.7E-20 9.3E-25 117.7 9.4 71 16-90 2-84 (157)
33 2k8i_A SLYD, peptidyl-prolyl C 99.8 1.5E-19 5.2E-24 115.7 11.7 70 16-90 3-72 (171)
34 3prb_A FKBP-type peptidyl-prol 99.8 2.2E-19 7.7E-24 119.5 11.2 71 16-90 2-84 (231)
35 2kr7_A FKBP-type peptidyl-prol 99.8 2.5E-19 8.5E-24 112.8 10.5 72 14-90 5-77 (151)
36 2kfw_A FKBP-type peptidyl-prol 99.8 4.2E-19 1.4E-23 115.8 10.6 70 16-90 3-72 (196)
37 1p5q_A FKBP52, FK506-binding p 99.8 1.1E-18 3.9E-23 121.3 12.7 100 2-111 26-129 (336)
38 1ix5_A FKBP; ppiase, isomerase 99.8 2.9E-19 9.9E-24 112.5 5.4 72 16-90 2-85 (151)
39 1w26_A Trigger factor, TF; cha 99.7 1.8E-16 6.1E-21 114.1 10.4 87 13-112 155-241 (432)
40 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.9E-16 6.5E-21 100.2 7.4 65 16-90 3-67 (158)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 7.3E-15 2.5E-19 105.8 11.7 100 2-111 147-250 (457)
42 1t11_A Trigger factor, TF; hel 99.6 1.2E-15 4.2E-20 108.6 6.3 86 14-112 159-244 (392)
43 3gty_X Trigger factor, TF; cha 98.6 8.2E-08 2.8E-12 69.2 7.1 73 15-112 154-226 (433)
44 3htx_A HEN1; HEN1, small RNA m 54.7 36 0.0012 27.1 6.2 65 16-80 561-649 (950)
45 3bmb_A Regulator of nucleoside 50.2 15 0.0005 21.9 2.9 25 59-83 90-114 (136)
46 2f23_A Anti-cleavage anti-GREA 47.6 17 0.00058 22.2 2.9 24 59-82 121-144 (156)
47 2pn0_A Prokaryotic transcripti 44.3 15 0.00051 22.0 2.3 24 59-82 93-116 (141)
48 2p4v_A Transcription elongatio 43.7 18 0.00063 22.1 2.6 25 58-82 119-143 (158)
49 2lj4_A Peptidyl-prolyl CIS-tra 41.9 12 0.00042 21.5 1.6 22 56-77 79-100 (115)
50 2lkt_A Retinoic acid receptor 41.0 51 0.0017 19.0 4.4 24 14-40 6-35 (125)
51 2p5d_A UPF0310 protein mjecl36 40.9 47 0.0016 20.0 4.1 22 61-83 29-50 (147)
52 2hd9_A UPF0310 protein PH1033; 34.1 37 0.0013 20.4 2.9 20 64-83 29-48 (145)
53 2rqs_A Parvulin-like peptidyl- 33.9 25 0.00085 19.3 2.0 23 55-77 60-82 (97)
54 1zk6_A Foldase protein PRSA; a 31.7 26 0.00088 19.0 1.8 22 56-77 56-77 (93)
55 1grj_A GREA protein; transcrip 31.2 15 0.00053 22.4 0.8 24 59-82 122-145 (158)
56 2pv1_A Chaperone SURA; surviVa 31.2 33 0.0011 18.9 2.2 23 56-78 65-87 (103)
57 1jns_A Peptidyl-prolyl CIS-tra 31.0 25 0.00087 19.0 1.7 23 56-78 54-76 (92)
58 3gpk_A PPIC-type peptidyl-prol 30.9 24 0.00083 20.2 1.6 23 56-78 66-88 (112)
59 2vqe_L 30S ribosomal protein S 30.0 92 0.0032 18.7 4.2 25 1-25 62-86 (135)
60 3lvj_C Sulfurtransferase TUSA; 27.9 56 0.0019 17.3 2.7 29 57-85 17-49 (82)
61 1je3_A EC005, hypothetical 8.6 27.8 80 0.0027 17.5 3.4 23 63-85 44-66 (97)
62 1dj7_B Ferredoxin thioredoxin 26.0 27 0.00092 18.8 1.1 12 70-81 1-12 (75)
63 4g2p_A Chaperone SURA; structu 25.6 23 0.0008 20.0 0.9 22 56-77 70-91 (110)
64 1o65_A Hypothetical protein YI 25.5 24 0.00082 23.4 1.0 23 1-26 154-176 (246)
65 3tb5_A Methionine aminopeptida 25.4 1.4E+02 0.0048 19.3 5.1 51 15-76 84-143 (264)
66 3ui4_A Peptidyl-prolyl CIS-tra 25.0 31 0.0011 19.2 1.3 21 56-76 57-77 (101)
67 2jzv_A Foldase protein PRSA; p 24.9 31 0.0011 19.4 1.3 22 56-77 75-96 (111)
68 3tc5_A Peptidyl-prolyl CIS-tra 24.5 30 0.001 21.3 1.3 22 55-76 129-150 (166)
69 1yw5_A Peptidyl prolyl CIS/tra 23.2 41 0.0014 20.8 1.7 23 55-77 140-162 (177)
70 1j6y_A Peptidyl-prolyl CIS-tra 23.2 35 0.0012 20.3 1.4 23 55-77 102-124 (139)
71 1jdq_A TM006 protein, hypothet 23.0 75 0.0026 17.6 2.7 22 63-84 43-64 (98)
72 3i6c_A Peptidyl-prolyl CIS-tra 23.0 28 0.00096 20.3 0.9 21 56-76 87-107 (123)
73 2qcp_X Cation efflux system pr 22.7 53 0.0018 17.6 1.9 15 67-81 51-65 (80)
74 2vb2_X Copper protein, cation 22.5 53 0.0018 17.9 1.9 15 67-81 59-73 (88)
75 3fm3_A Methionine aminopeptida 22.2 2E+02 0.0068 19.9 5.2 49 16-75 121-175 (358)
76 1okg_A Possible 3-mercaptopyru 21.5 72 0.0025 22.1 2.9 23 61-83 336-358 (373)
77 1zce_A Hypothetical protein AT 20.2 56 0.0019 20.1 1.8 19 64-82 38-56 (155)
No 1
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=100.00 E-value=2.7e-32 Score=164.68 Aligned_cols=107 Identities=48% Similarity=0.834 Sum_probs=100.6
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
+|++|+++++|+|.. ++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||++||.+|++|+++++.
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 589999999999998 999999999999999888 9999998643 49999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||+++||+.+.++. |||+++|+|+|+|++|+
T Consensus 82 ip~~~ayG~~~~~~~-Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 82 IPGPYAYGPRGFPGL-IPPNSTLVFDVELLKVN 113 (113)
T ss_dssp ECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred ECHHHCcCCCCCCCC-cCCCCeEEEEEEEEEeC
Confidence 999999999988776 99999999999999985
No 2
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=100.00 E-value=2e-32 Score=163.81 Aligned_cols=106 Identities=46% Similarity=0.904 Sum_probs=99.4
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 2 Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
|++|+++++|+|.. ++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||++||.+|++|+++++.|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i 76 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence 79999999999988 999999999999999888 9999997533 499999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||+++||+.+.++. |||+++|+|+|+|++++
T Consensus 77 p~~~ayG~~~~~~~-Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 77 SPDYAYGATGHPGI-IPPHATLVFDVELLKLE 107 (107)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred CHHHccCCCCCCCC-cCCCCeEEEEEEEEEeC
Confidence 99999999988776 99999999999999985
No 3
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=100.00 E-value=4.1e-32 Score=165.22 Aligned_cols=108 Identities=36% Similarity=0.686 Sum_probs=99.2
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCC------CccEEEEeCCCCccccHHHHhcCCCCCc
Q 033778 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPG------QQPFTFQIGKGSVIKGWDEGVMGMQVGE 74 (112)
Q Consensus 2 Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~------~~~~~~~~g~~~~~~g~~~al~~m~~Ge 74 (112)
|++|+++++|+|.. |+.||.|.+||++++.|| ++||+++... .+|+.|.+|.+++++||++||.+|++|+
T Consensus 5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDG---TVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp SEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS---CEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred ccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCC---CEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 89999999999975 999999999999999888 9999997531 2599999999999999999999999999
Q ss_pred EEEEEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 75 VARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 75 ~~~i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
+++|+|||++|||+.+.++..|||+++|+|+|+|++|+
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 99999999999999988653499999999999999985
No 4
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.98 E-value=1.1e-31 Score=168.26 Aligned_cols=106 Identities=46% Similarity=0.806 Sum_probs=99.6
Q ss_pred CeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 2 Gi~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
|++|+++++|+|. .|+.||.|.+||++++.|| ++||+++.++ +|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 36 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SEEEEEEECCBSSCCCCTTCEEEEEEEEECTTS---CEEEESGGGT-SCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred eEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEeecccC-CCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence 8999999999998 4999999999999999888 9999998644 499999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||++|||..+.++. |||+++|+|+|+|++++
T Consensus 112 pp~~aYG~~g~~~~-Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 112 KPEYAYGSAGSLPK-IPSNATLFFEIELLDFK 142 (144)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred ChHHCcCCCCCCCC-cCCCCeEEEEEEEEEec
Confidence 99999999998876 99999999999999984
No 5
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.98 E-value=8.6e-32 Score=165.74 Aligned_cols=106 Identities=46% Similarity=0.810 Sum_probs=99.1
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 2 Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
|++|+++++|+|.. |+.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++++|
T Consensus 20 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 89999999999985 999999999999999888 9999987643 499999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||++|||..+.++. |||+++|+|+|+|++++
T Consensus 96 p~~~aYG~~g~~~~-Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 96 KPEYAYGSAGSLPK-IPSNATLFFEIELLDFK 126 (128)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred ChHHcCCCCCCCCC-cCCCCEEEEEEEEEEec
Confidence 99999999988776 99999999999999974
No 6
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.97 E-value=2.3e-31 Score=164.77 Aligned_cols=106 Identities=51% Similarity=0.848 Sum_probs=99.4
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
.|++|+++++|+|..++.||.|.+||++++.+| ++||+++++. +|+.|.+|.+++++||+++|.+|++||+++++|
T Consensus 28 ~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~i 103 (133)
T 2y78_A 28 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 103 (133)
T ss_dssp TSCEEEEEECCSSCBCCTTSEEEEEEEEEETTS---CEEEETTTTT-CCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEeccCcCC-CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEE
Confidence 489999999999999999999999999999888 9999998644 599999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
|++++||+.+.++. |||+++|+|+|+|++|
T Consensus 104 p~~~aYG~~~~~~~-Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 104 PPQLGYGARGAGGV-IPPNATLVFEVELLDV 133 (133)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEC
T ss_pred CcHHhCCCCCCCCC-CCCCCeEEEEEEEEEC
Confidence 99999999988776 9999999999999986
No 7
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.97 E-value=3.4e-31 Score=163.44 Aligned_cols=106 Identities=45% Similarity=0.835 Sum_probs=98.9
Q ss_pred CCeEEE--EeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 033778 1 MGIEKQ--ILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 1 ~Gi~~~--~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
+|++|+ ++++|+|.. ++.||.|.+||++++.|| ++||+++.++ +|+.|.+|.+++++||+++|.+|++||+++
T Consensus 22 ~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRG-KPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTS---CEEECTTTTT-CCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred CceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCC---CEEEccCcCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 478888 999999999 999999999999998888 9999998743 499999999999999999999999999999
Q ss_pred EEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 78 LRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 78 i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
+.|||+++||+.+.++. |||+++|+|+|+|++|
T Consensus 98 v~ip~~~aYG~~~~~~~-Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 FTIPYQLAYGERGYPPV-IPPKATLVFEVELLAV 130 (130)
T ss_dssp EEECTTTSTTTTCCSTT-SCSSCCEEEEEEEEEC
T ss_pred EEECcHHHCCCCCCCCC-cCCCCeEEEEEEEEEC
Confidence 99999999999988777 9999999999999986
No 8
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=161.21 Aligned_cols=106 Identities=35% Similarity=0.588 Sum_probs=97.3
Q ss_pred CeEEEEeccCC--CCCCCCCCEEEEEEEEEEe-CCCceeeEecccCC-CCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 033778 2 GIEKQILTPGN--GPKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 2 Gi~~~~~~~G~--g~~~~~gd~V~v~y~~~~~-~g~~~~~~~~t~~~-~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
|++|+++++|+ |..++.||.|.+||++++. || ++||+++.+ ..+|+.|.+|.+++++||++||.+|++|++++
T Consensus 13 gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG---~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~ 89 (125)
T 4dip_A 13 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG---SLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK 89 (125)
T ss_dssp CCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTC---CEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred CeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCC---cEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 79999999999 7789999999999999998 77 999999732 23599999999999999999999999999999
Q ss_pred EEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 78 LRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 78 i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
++|||++|||+.+.+ . |||+++|+|+|+|++|+
T Consensus 90 ~~ip~~~aYG~~g~~-~-Ip~~~~l~f~vel~~i~ 122 (125)
T 4dip_A 90 LIIPPALGYGKEGKG-K-IPPESTLIFNIDLLEIR 122 (125)
T ss_dssp EEECGGGTTTTTCBT-T-BCTTCCEEEEEEEEEEE
T ss_pred EEEChHHhcCCCCCC-C-CCCCCeEEEEEEEEEEE
Confidence 999999999999866 4 99999999999999974
No 9
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=165.48 Aligned_cols=107 Identities=31% Similarity=0.533 Sum_probs=94.0
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeC-CCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKN-GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~-g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|++|+++++|+|..++.||.|.+||++++.+ | ++|++++.+. +|+.|.+|.+.+++||++||.+|++|++++++
T Consensus 26 ~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G---~~fdss~~~~-~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~ 101 (134)
T 3b7x_A 26 RGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMD---RPFDSNYFRK-TPRLMKLGEDITLWGMELGLLSMRRGELARFL 101 (134)
T ss_dssp SSEEEEEEECCEEEECCTTCEEEEEEEEECTTCS---SCSEEC--------CEEC-CCCCCHHHHHHHHTCEETCEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCC---eEEEecCCCC-CCEEEEcCCcchhHHHHHHHhCCCCCCEEEEE
Confidence 48999999999999999999999999999884 6 9999998643 59999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||++|||+.+.++. |||+++|+|+|+|++|+
T Consensus 102 ip~~~aYG~~~~~~~-Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 102 FKPNYAYGTLGCPPL-IPPNTTVLFEIELLDFL 133 (134)
T ss_dssp ECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEC
T ss_pred ECHHHCcCCCCCCCC-cCcCCeEEEEEEEEEEe
Confidence 999999999988877 99999999999999985
No 10
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.97 E-value=1.8e-30 Score=161.09 Aligned_cols=107 Identities=43% Similarity=0.743 Sum_probs=98.9
Q ss_pred CCeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|++|+++++|+|. .++.||.|.+||++++.+| ++|++++.++ +|+.|.+|.+++++||++||.+|++|++++++
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ 89 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT 89 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCC---CEEEecCcCC-CCEEEEeCCCCccHHHHHHHhcCCCCCEEEEE
Confidence 38999999999997 4999999999999999888 9999987533 49999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||++|||+.+.++. ||++++|+|+|+|++++
T Consensus 90 ip~~~aYG~~g~~~~-Ip~~~~l~f~v~l~~i~ 121 (135)
T 1r9h_A 90 IRSDYGYGDAGSPPK-IPGGATLIFEVELFEWS 121 (135)
T ss_dssp ECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EChHHcCCCCCCCCC-cCcCCcEEEEEEEEEee
Confidence 999999999988776 99999999999999873
No 11
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.97 E-value=1.9e-30 Score=171.72 Aligned_cols=101 Identities=41% Similarity=0.622 Sum_probs=95.8
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 033778 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCS 81 (112)
Q Consensus 2 Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp 81 (112)
|++|+++++|+|..|..||.|.+||++++.|| ++||++ . .|+.|.+| ++++||+++|.+|++|++++++||
T Consensus 118 Gl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG---~vfDss-~---~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 118 GILMTELTPGTGPKPDANGRVEVRYVGRLPDG---KIFDQS-T---QPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp GCEEEEEECCCSCCCCTTSEEEEEEEEECTTS---CEEEEC-S---SCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CeEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEeecc-C---CcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 89999999999999999999999999999998 999998 2 59999996 899999999999999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 82 PDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 82 ~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|++|||..+.++. |||+++|+|+|+|++|+
T Consensus 189 p~lAYG~~g~~~~-IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 189 SDQAYGAEGAGDL-IDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred chhcCCCCCCCCC-CCCCCeEEEEEEEEEEe
Confidence 9999999998876 99999999999999984
No 12
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.97 E-value=2.7e-30 Score=170.49 Aligned_cols=106 Identities=51% Similarity=0.854 Sum_probs=100.2
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
.|++|+++++|+|..++.||.|.+||++++.|| ++||+++.++ +|+.|.+|.+.+++||++||.+|++|++++++|
T Consensus 104 sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~~-~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~I 179 (209)
T 3uf8_A 104 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 179 (209)
T ss_dssp TSCEEEEEECCCSCBCCTTCEEEEEEEEEETTS---CEEEESGGGT-CCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEE
T ss_pred CceEEEEEEcCCCCcCCCCCEEEEEEEEEECCC---CEEEEccccC-CCEEEEeCCCccchhHHHHHhCCCCCCEEEEEE
Confidence 489999999999999999999999999999888 9999998744 499999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
||++|||+.+.++. |||+++|+|+|+|++|
T Consensus 180 pp~~aYG~~g~~~~-IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 180 PPQLGYGARGAAGV-IPPNATLVFEVELLDV 209 (209)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEC
T ss_pred CcHHhCCCCCCCCC-cCCCCeEEEEEEEEEC
Confidence 99999999998877 9999999999999986
No 13
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.97 E-value=1.2e-30 Score=166.77 Aligned_cols=105 Identities=35% Similarity=0.595 Sum_probs=97.3
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|++|+++++|+|.. |+.||.|.+||++++.|| ++||+++.++ .|+.|.+ +++++||+++|.+|++|++++|+
T Consensus 37 sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~ 110 (167)
T 1jvw_A 37 SGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERG-KPTTFRP--NEVIKGWTEALQLMREGDRWRLF 110 (167)
T ss_dssp TSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS---CEEEEHHHHT-SCEEECG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEe--CchhHHHHHHHcCCCCCCEEEEE
Confidence 489999999999999 999999999999999888 9999997643 4999988 58999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||++|||..+.++. |||+++|+|+|+|++|+
T Consensus 111 Ip~~laYG~~g~~~~-Ipp~s~LiF~VeL~~i~ 142 (167)
T 1jvw_A 111 IPYDLAYGVTGGGGM-IPPYSPLEFDVELISIK 142 (167)
T ss_dssp ECGGGTTTTTCSSSS-SCTTCCEEEEEEEEEEG
T ss_pred ECchhhCCCCCCCCC-cCCCCeEEEEEEEEEEE
Confidence 999999999988766 99999999999999984
No 14
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.97 E-value=9.7e-30 Score=156.70 Aligned_cols=105 Identities=40% Similarity=0.600 Sum_probs=94.7
Q ss_pred eEEEEeccC---CCCCCCCCCEEEEEEEEEE-eCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 033778 3 IEKQILTPG---NGPKPVAGQKVTVHCTGYG-KNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (112)
Q Consensus 3 i~~~~~~~G---~g~~~~~gd~V~v~y~~~~-~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i 78 (112)
++++++++| +|..++.||.|.+||++++ .+| ++||+++.+. +|+.|.+|.+++++||+++|.+|++|+++++
T Consensus 18 ~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG---~~fd~s~~~~-~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v 93 (129)
T 2vn1_A 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTG---KVFDSSFDRN-VPFKFHLEQGEVIKGWDICVSSMRKNEKCLV 93 (129)
T ss_dssp EEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTC---CEEEEGGGTT-CCEEEETTSSSSCHHHHHHHTTCCTTCEEEE
T ss_pred EEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCC---eEEEecCCCC-ccEEEEeCCCCcCHHHHHHHhCCCCCCEEEE
Confidence 455789966 5677999999999999998 677 9999998643 4999999999999999999999999999999
Q ss_pred EECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 79 RCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 79 ~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
+|||+++||+.+.++. |||+++|+|+|+|++++
T Consensus 94 ~ip~~~aYG~~~~~~~-Ip~~~~l~f~vel~~v~ 126 (129)
T 2vn1_A 94 RIESMYGYGDEGCGES-IPGNSVLLFEIELLSFR 126 (129)
T ss_dssp EECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred EEChHHcCCCCCCCCC-cCCCCeEEEEEEEEEEe
Confidence 9999999999988776 99999999999999874
No 15
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.97 E-value=1.2e-29 Score=154.12 Aligned_cols=101 Identities=33% Similarity=0.525 Sum_probs=94.8
Q ss_pred eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 3 i~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
++|+++++|+|. .++.||.|.+||++++.+| ++|+++ +|+.|.+|.+++++||+++|.+|++|++++++|
T Consensus 15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG---~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i 86 (118)
T 2awg_A 15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 86 (118)
T ss_dssp EEEEEEECCCTTCCCCCTTSEEEEEEEEECTTS---CEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEECC-----CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 6999999999999998888 999974 599999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|+++|||..+.++. |||+++|+|+|+|++++
T Consensus 87 p~~~ayG~~~~~~~-Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 87 DSKYCYGPQGRSPY-IPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred ChHHccCCCCCCCc-cCCCCeEEEEEEEEEec
Confidence 99999999988766 99999999999999874
No 16
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.97 E-value=2.1e-29 Score=162.88 Aligned_cols=108 Identities=30% Similarity=0.449 Sum_probs=98.4
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~-~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|++|+++++|+|..++.||.|.+||++++.++| ++|++++.++ .|+.|.+|.+ ++++||+++|.+|++|++++|+
T Consensus 49 ~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG--~~fdss~~~~-~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp TTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTC--CEEEETTTTT-CCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCC--cEEeccCccC-CCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 4899999999999999999999999999998533 9999998754 5999999998 8999999999999999999999
Q ss_pred ECCCCCcCCCCC--CCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGF--PQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~--~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||++++||..+. ++. |||+++|+|+|+|++|+
T Consensus 126 iPp~~aYG~~g~~~~~~-Ip~~s~l~F~VeL~~v~ 159 (180)
T 2f4e_A 126 VGWELAYGKEGNFSFPN-VPPMADLLYEVEVIGFD 159 (180)
T ss_dssp ECGGGTTTTTCBSSSSC-BCTTCCEEEEEEEEEES
T ss_pred ECchHhCCcCCcccCCC-cCCCCeEEEEEEEEEEe
Confidence 999999999886 344 99999999999999874
No 17
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.97 E-value=6.7e-30 Score=168.82 Aligned_cols=105 Identities=35% Similarity=0.568 Sum_probs=97.3
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
.|++|+++++|+|..|+.||.|.+||++++.|| ++||+++.++ .|+.|.+ +.+++||+++|.+|++|++++|+|
T Consensus 106 sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I 179 (213)
T 1fd9_A 106 SGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPAGSTWEIYV 179 (213)
T ss_dssp TSCEEEEEECCCSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CccEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEc--CchhhHHHHHHcCCCCCCEEEEEE
Confidence 489999999999999999999999999999888 9999998644 4999999 589999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||+++||+.+.++. |||+++|+|+|+|++|+
T Consensus 180 P~~laYG~~g~~~~-Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 180 PSGLAYGPRSVGGP-IGPNETLIFKIHLISVK 210 (213)
T ss_dssp CGGGTTTTCCCSSS-CCTTCCEEEEEEEEEEE
T ss_pred CchhccCccCCCCC-CCCCCeEEEEEEEEEEE
Confidence 99999999987666 99999999999999874
No 18
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=164.94 Aligned_cols=83 Identities=27% Similarity=0.438 Sum_probs=77.3
Q ss_pred CCeEEEEeccCCCCC--CCCCCEEEEEEEEEEeC--CCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEE
Q 033778 1 MGIEKQILTPGNGPK--PVAGQKVTVHCTGYGKN--GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~--~~~gd~V~v~y~~~~~~--g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~ 76 (112)
.||+|+++++|+|.. ++.||.|.+||++++.| | ++||||++++ +|+.|.+|.+++|+||++||.+|++|+++
T Consensus 10 ~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G---~~FDsS~~rg-~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 10 DGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEG---TVLDDSRARG-KPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp TSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSC---CEEEESTTTT-CCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred CCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCc---cEEEecccCC-CCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 389999999999976 46899999999999965 6 9999999876 49999999999999999999999999999
Q ss_pred EEEECCCCCcC
Q 033778 77 RLRCSPDYAYG 87 (112)
Q Consensus 77 ~i~vp~~~ayg 87 (112)
+|+|||++|||
T Consensus 86 ~~~ipp~laYG 96 (165)
T 2lkn_A 86 QFLCDIKHVVL 96 (165)
T ss_dssp EEECCHHHHSS
T ss_pred EEEECHHHhcC
Confidence 99999999998
No 19
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=160.14 Aligned_cols=102 Identities=33% Similarity=0.541 Sum_probs=94.6
Q ss_pred Ce-EEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 033778 2 GI-EKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (112)
Q Consensus 2 Gi-~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i 78 (112)
|+ +|+++++|+|. .++.||.|.+||++++.|| ++||++ +|+.|.+|.+++++||+++|.+|++|+++++
T Consensus 43 G~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG---~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v 114 (157)
T 2jwx_A 43 GLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 114 (157)
T ss_dssp SSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTS---CEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEE
T ss_pred CCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCC---CEeecC-----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 55 89999999997 7999999999999999888 999984 5999999999999999999999999999999
Q ss_pred EECCCCCcCCCC-CCCCCCCCCCeEEEEEEEEEeC
Q 033778 79 RCSPDYAYGAGG-FPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 79 ~vp~~~ayg~~~-~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
+||++++||..+ .++. |||+++|+|+|+|++++
T Consensus 115 ~IP~~~aYG~~g~~~~~-IPp~stLiF~VeL~~i~ 148 (157)
T 2jwx_A 115 TADSKYCYGPQGSRSPY-IPPHAALCLEVTLKTAV 148 (157)
T ss_dssp EECGGGTTTTTCCSSSC-CCTTCCEEEEEEEEEEE
T ss_pred EECchhcCCcccccCCC-cCCCCeEEEEEEEEEEE
Confidence 999999999998 5555 99999999999999874
No 20
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.96 E-value=2.4e-30 Score=159.43 Aligned_cols=106 Identities=42% Similarity=0.700 Sum_probs=97.4
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcC------CCCCc
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG------MQVGE 74 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~------m~~Ge 74 (112)
.|++|+++++|+|..++.||.|.+||++++.+| ++||+++.+. +|+.|.+|.+++++||+++|.+ |++|+
T Consensus 12 ~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 12 SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp TSCEEEEEECCSSCBCCTTCEEEEEEEEECTTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred CCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 489999999999999999999999999998888 9999997533 4999999999999999999998 99999
Q ss_pred EEEEEECCCCCcCCCCCC-----CCCCCCCCeEEEEEEEEEe
Q 033778 75 VARLRCSPDYAYGAGGFP-----QWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 75 ~~~i~vp~~~ayg~~~~~-----~~~ip~~~~l~~~v~l~~v 111 (112)
+++++|||+++||+.+.+ +. |||+++|+|+|+|++|
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~-Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCL-IPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEE-ECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCc-CCCCCeEEEEEEEEEe
Confidence 999999999999998763 34 9999999999999987
No 21
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.96 E-value=3.9e-29 Score=166.17 Aligned_cols=104 Identities=34% Similarity=0.691 Sum_probs=96.9
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
.|++|+++++|+|..|+.||.|.+||++++.|| ++||+++.++ .|+.|.+ +.+++||+++|.+|++|++++|+|
T Consensus 121 sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I 194 (224)
T 1q6h_A 121 TGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVI 194 (224)
T ss_dssp TSCEEEEEECCSSCCCCTTCEEEEEEEEEETTS---CEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEE
T ss_pred CceEEEEEecccCccccCCCEEEEEEEEEeCCC---CEEeeccccC-CCEEEEc--CCcchhHHHHHcCCCCCCEEEEEE
Confidence 389999999999999999999999999999888 9999998754 4999999 589999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||+++||..+.++ |||+++|+|+|+|++|+
T Consensus 195 P~~laYG~~g~~~--IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 195 PPELAYGKAGVPG--IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp CGGGTTTTTCBTT--BCTTCCEEEEEEEEEEC
T ss_pred CchhhcCcCCCCC--CCCCCEEEEEEEEEEeC
Confidence 9999999988764 99999999999999985
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=8.2e-29 Score=153.65 Aligned_cols=101 Identities=33% Similarity=0.525 Sum_probs=94.1
Q ss_pred eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 3 i~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
++|+++++|+|. .++.||.|.+||++++.+| ++|+++ +|+.|.+|.+++++||+++|.+|++|++++++|
T Consensus 19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG---~~fds~-----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~i 90 (135)
T 2d9f_A 19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 90 (135)
T ss_dssp SEEEEEECCCSSCCCCCTTSEEEEEEEEEESSS---CEEEEE-----EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEecC-----CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 6999999999999999888 999973 599999999999999999999999999999999
Q ss_pred CCCCCcCCCC-CCCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGG-FPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~-~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|++++||..+ .++. |||+++|+|+|+|++++
T Consensus 91 p~~~aYG~~~~~~~~-Ip~~~~l~f~vel~~v~ 122 (135)
T 2d9f_A 91 DSKYCYGPQGSRSPY-IPPHAALCLEVTLKTAV 122 (135)
T ss_dssp CHHHHTCTTCCSSSC-CCTTCCEEEEEEEEEEE
T ss_pred ChhHccCcCCcCCCc-cCCCCeEEEEEEEEEee
Confidence 9999999988 5555 99999999999999874
No 23
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.4e-28 Score=143.39 Aligned_cols=95 Identities=38% Similarity=0.687 Sum_probs=87.5
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCCCC
Q 033778 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFP 92 (112)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~~~ 92 (112)
|.+++.||.|.+||++++.+| ++|++++.+. +|+.|.+|.+++++||+++|.+|++|+++++++|++++||..+.+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~ 78 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDG---TEFDSSLPQN-QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP 78 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTS---CEEEESTTTT-CCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT
T ss_pred CCcCCCCCEEEEEEEEEECCC---CEEEeCCCCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC
Confidence 456999999999999998788 9999998644 599999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCeEEEEEEEEEeC
Q 033778 93 QWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 93 ~~~ip~~~~l~~~v~l~~v~ 112 (112)
+. |||+++|+|+|+|++++
T Consensus 79 ~~-Ip~~~~l~f~v~l~~v~ 97 (102)
T 2pbc_A 79 PK-IPGGATLVFEVELLKIE 97 (102)
T ss_dssp TT-BCTTCCEEEEEEEEEEG
T ss_pred CC-cCcCCeEEEEEEEEEec
Confidence 76 99999999999999874
No 24
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.95 E-value=2.1e-27 Score=162.63 Aligned_cols=107 Identities=43% Similarity=0.820 Sum_probs=99.7
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.||+|+++++|+|.. ++.||.|.+||++++.|| ++||+++++. +|+.|.+|.+++++||++||.+|++|++++|+
T Consensus 51 ~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ 126 (280)
T 1q1c_A 51 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKVGEVCHIT 126 (280)
T ss_dssp SSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCTTCEEEEE
T ss_pred CceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCC---CEEEecccCC-CCEEEEECCcChhHHHHHHHhcCCCCCEEEEE
Confidence 389999999999998 999999999999999888 9999998643 59999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||++|||..+.++. ||++++|+|+|+|++++
T Consensus 127 ipp~~aYG~~g~~~~-Ip~~~~lvf~Vel~~i~ 158 (280)
T 1q1c_A 127 CKPEYAYGSAGSPPK-IPPNATLVFEVELFEFK 158 (280)
T ss_dssp ECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEEE
T ss_pred ECcHHhCCCcCccCC-CCCCCcEEEEEEeeeec
Confidence 999999999988776 99999999999999863
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.94 E-value=1.1e-26 Score=167.44 Aligned_cols=106 Identities=46% Similarity=0.800 Sum_probs=82.4
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|+.|+++++|+|.. |+.||.|.+||++++.+| ++||+++.++ .|+.|.+|.+.+++||+++|.+|++|++++|+
T Consensus 31 ~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g---~~~dss~~~~-~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~ 106 (457)
T 1kt0_A 31 RGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKRGEICHLL 106 (457)
T ss_dssp --CEEEC--------CCCBTCEEEEEEEEEC--------CBC-------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEE
T ss_pred CcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCC---CEEeccCCCC-CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEE
Confidence 389999999999998 999999999999999888 9999998754 59999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
|||+++||..+.++. ||++++++|+|+|+++
T Consensus 107 i~~~~~yg~~g~~~~-i~~~~~l~~~v~l~~~ 137 (457)
T 1kt0_A 107 CKPEYAYGSAGSLPK-IPSNATLFFEIELLDF 137 (457)
T ss_dssp ECGGGTTTTTCBTTT-BCTTCCEEEEEEEEEE
T ss_pred EChHHhccccCCCCC-CCCCCcEEEEEeecee
Confidence 999999999998776 9999999999999986
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.93 E-value=9.4e-26 Score=158.91 Aligned_cols=107 Identities=34% Similarity=0.584 Sum_probs=96.4
Q ss_pred CeEEEEeccCCC-CCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 033778 2 GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRC 80 (112)
Q Consensus 2 Gi~~~~~~~G~g-~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~v 80 (112)
+++++++++|+| ..|+.||.|.+||++++.|| ++|+++.....+|+.|.+|.+++++||+++|.+|++||+++++|
T Consensus 245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG---~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~i 321 (356)
T 3jxv_A 245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQDG---TVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTI 321 (356)
T ss_dssp CEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS---CEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred ceeEEeeecccccCCCCCCCEEEEEEEEEECCC---CEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEE
Confidence 689999999999 56999999999999999888 99998853334699999999999999999999999999999999
Q ss_pred CCCCCcCCCCC--CCCCCCCCCeEEEEEEEEEeC
Q 033778 81 SPDYAYGAGGF--PQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 81 p~~~ayg~~~~--~~~~ip~~~~l~~~v~l~~v~ 112 (112)
||++|||+.+. ... ||++++|+|+|+|++++
T Consensus 322 p~~~aYG~~~~~~~~~-Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 322 PPEYAYGSTESKQDAI-VPPNSTVIYEVELVSFV 354 (356)
T ss_dssp CGGGTTTTSCEESSSE-ECTTCCEEEEEEEEEEE
T ss_pred ChHHccCCCCcCCCCc-CCcCCeEEEEEEEEEEE
Confidence 99999998874 233 99999999999999874
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.93 E-value=4.7e-28 Score=170.64 Aligned_cols=107 Identities=40% Similarity=0.755 Sum_probs=0.4
Q ss_pred CCeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|++|+++++|+|. .|+.||.|.+||++++.|| ++||+++.++ +|+.|.+|.+++++||+++|.+|++|++++++
T Consensus 11 ~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~ 86 (356)
T 3jxv_A 11 QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDRD-DTFKFKLGQGQVIKGWDQGIKTMKKGENALFT 86 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEEEEEeecCCccCCCCCEEEEEEEEEECCC---CEEEEcccCC-CcEEEEeCCCccchHHHHHHhcCCCCCEEEEE
Confidence 48999999999994 5999999999999999988 9999998754 49999999999999999999999999999999
Q ss_pred ECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 80 CSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 80 vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
|||++|||+.+.++. |||+++|+|+|+|++++
T Consensus 87 ip~~~aYG~~g~~~~-Ip~~~~l~f~vel~~~~ 118 (356)
T 3jxv_A 87 IPPELAYGESGSPPT-IPANATLQFDVELLSWT 118 (356)
T ss_dssp --------------------------------C
T ss_pred EChHHhCCCCCCCCC-cCCCCEEEEEeeEEeee
Confidence 999999999998876 99999999999999873
No 28
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.92 E-value=3.9e-25 Score=154.15 Aligned_cols=107 Identities=30% Similarity=0.445 Sum_probs=97.0
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR 79 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~-~~~~g~~~al~~m~~Ge~~~i~ 79 (112)
.|+.++++++|+|..|+.||.|.|||++++.++| ++||+++.++ +|+.|.+|.+ ++++||+++|.+|++||+++|+
T Consensus 49 ~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g--~~fd~~~~~~-~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp TTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTC--CCCEEHHHHT-CCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCC--cEeecccCCC-CCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 3899999999999999999999999999998633 9999987543 4999999998 8999999999999999999999
Q ss_pred ECCCCCcCCCCCC--CCCCCCCCeEEEEEEEEEe
Q 033778 80 CSPDYAYGAGGFP--QWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 80 vp~~~ayg~~~~~--~~~ip~~~~l~~~v~l~~v 111 (112)
||++++||..+.. +. ||++++++|+|+|+++
T Consensus 126 i~~~~~yg~~~~~~~~~-ip~~~~l~f~v~L~~~ 158 (338)
T 2if4_A 126 VGWELAYGKEGNFSFPN-VPPMADLLYEVEVIGF 158 (338)
T ss_dssp ECGGGSSCSSCCCSSSC-CCTTCCEEEEEEEEEE
T ss_pred ECHHHhcCCCCCCCCCC-CCCCCcEEEEEEEEEe
Confidence 9999999998862 44 9999999999999876
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.92 E-value=3.1e-24 Score=146.95 Aligned_cols=102 Identities=31% Similarity=0.542 Sum_probs=93.2
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEE
Q 033778 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~---~~~g~~~al~~m~~Ge~~ 76 (112)
.|+.++++++|+|.. ++.||.|.+||++++ +| ++|+++ |+.|.+|.++ +++||+++|.+|++||++
T Consensus 168 ~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG---~~fd~~------~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 168 GGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp SSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cceeEEeeecccccccccCCceEEEEEEEEe-CC---EEEecC------CeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence 378999999999985 999999999999998 77 999972 8999999887 599999999999999999
Q ss_pred EEEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEeC
Q 033778 77 RLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 77 ~i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v~ 112 (112)
+++||++++||..+.+..+||++++++|+|+|++|+
T Consensus 238 ~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~ 273 (280)
T 1q1c_A 238 IVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFE 273 (280)
T ss_dssp EEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEE
T ss_pred EEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEe
Confidence 999999999999887654599999999999999874
No 30
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.87 E-value=3.8e-22 Score=120.14 Aligned_cols=87 Identities=23% Similarity=0.399 Sum_probs=75.5
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCCCC
Q 033778 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFP 92 (112)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~~~ 92 (112)
+.+++.||.|.+||++++ || ++||+++. +|+.|.+|.+++++||+++|.+|++|+++++.||+...||..+.
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG---~~fdss~~---~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~- 98 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DN---KKLASASA---QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL- 98 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TT---EECSTTCC---SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG-
T ss_pred CCCCCCCCEEEEEEEEEE-CC---EEcccCCc---cCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC-
Confidence 456999999999999998 88 99999964 69999999999999999999999999999999974445987643
Q ss_pred CCCCCCCCeEEEEEEEEEeC
Q 033778 93 QWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 93 ~~~ip~~~~l~~~v~l~~v~ 112 (112)
++++++|+|+|++|+
T Consensus 99 -----~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 -----QSKPVTFEVVLKAIK 113 (113)
T ss_dssp -----GSCCCEEEEEECCBC
T ss_pred -----CCCEEEEEEEEEEEC
Confidence 457999999999885
No 31
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.83 E-value=1.6e-20 Score=119.92 Aligned_cols=72 Identities=28% Similarity=0.490 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCC
Q 033778 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGG 90 (112)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~ 90 (112)
+++.||.|.+||++++.+| ++||+++.++ +|+.|.+|.+++++||++||.+|++|++++|.|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG---~vfDss~~~~-~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDG---TTAESTRNNG-KPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 4899999999999999888 9999997633 4999999999999999999999999999999999999999864
No 32
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.83 E-value=2.7e-20 Score=117.69 Aligned_cols=71 Identities=30% Similarity=0.525 Sum_probs=65.0
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~------------~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
++.||.|.+||++++ +| ++||+|+.. ..+|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~ 77 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (157)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcH
Confidence 678999999999999 88 999999752 12599999999999999999999999999999999999
Q ss_pred CCcCCCC
Q 033778 84 YAYGAGG 90 (112)
Q Consensus 84 ~ayg~~~ 90 (112)
+|||+++
T Consensus 78 ~aYG~~~ 84 (157)
T 3pr9_A 78 KAFGKRD 84 (157)
T ss_dssp GTTCCCC
T ss_pred HhcCCCC
Confidence 9999875
No 33
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.82 E-value=1.5e-19 Score=115.70 Aligned_cols=70 Identities=20% Similarity=0.309 Sum_probs=65.2
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGG 90 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~ 90 (112)
++.||.|.++|++++.+| ++|++++.+ +|+.|.+|.+++++||++||.+|++|++++|.|||+.|||.++
T Consensus 3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTS---CEEEECCSS--SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCC---CEEeeccCC--cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 688999999999998788 999999762 5999999999999999999999999999999999999999874
No 34
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.81 E-value=2.2e-19 Score=119.51 Aligned_cols=71 Identities=30% Similarity=0.525 Sum_probs=64.8
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~------------~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
++.||.|.+||++++ +| ++||+|+.. ...|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe 77 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (231)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcH
Confidence 678999999999999 88 999999752 12599999999999999999999999999999999999
Q ss_pred CCcCCCC
Q 033778 84 YAYGAGG 90 (112)
Q Consensus 84 ~ayg~~~ 90 (112)
+|||.++
T Consensus 78 ~AYGe~~ 84 (231)
T 3prb_A 78 KAFGKRD 84 (231)
T ss_dssp GTTCCCC
T ss_pred HhcCCCC
Confidence 9999865
No 35
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.81 E-value=2.5e-19 Score=112.75 Aligned_cols=72 Identities=22% Similarity=0.339 Sum_probs=66.1
Q ss_pred CCCCCCCEEEEEEEEEEe-CCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCC
Q 033778 14 PKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGG 90 (112)
Q Consensus 14 ~~~~~gd~V~v~y~~~~~-~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~ 90 (112)
.+++.||.|.+||++++. +| ++||+++. .+|+.|.+|.+++++||++||.+|++|+++++.|||++|||.++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG---~~fdss~~--~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSS---IVLDSNIS--KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCS---CEEEESTT--TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred cCCCCCCEEEEEEEEEECCCC---CEEEeCCC--CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 348899999999999987 77 99999976 25999999999999999999999999999999999999999864
No 36
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.80 E-value=4.2e-19 Score=115.77 Aligned_cols=70 Identities=20% Similarity=0.309 Sum_probs=65.2
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGG 90 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~ 90 (112)
++.+|.|.++|++++.+| ++||+++.+ +|+.|.+|.+++++||++||.+|++|++++|.|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTT---EEEEECCTT--SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECCC---CEEEecCCC--CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 789999999999998787 999999763 5999999999999999999999999999999999999999864
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.80 E-value=1.1e-18 Score=121.29 Aligned_cols=100 Identities=32% Similarity=0.565 Sum_probs=91.8
Q ss_pred CeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEEE
Q 033778 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 2 Gi~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~---~~~g~~~al~~m~~Ge~~~ 77 (112)
||.++++++|+|. .|..|+.|.+||++++ +| ++||++ |+.|.+|.+. ++++|++|+..|+.|+++.
T Consensus 26 ~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g---~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 26 GIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp SEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred cEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CC---EEEecC------CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 7899999999998 4999999999999998 87 999986 8999999775 5899999999999999999
Q ss_pred EEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 78 LRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 78 i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
+.++|..+|+..|.....||+++++.|++++.++
T Consensus 96 l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~ 129 (336)
T 1p5q_A 96 VYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSF 129 (336)
T ss_dssp EEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEE
T ss_pred EEECCccccCcCCCCccCCCCCCeEEEEEEEeec
Confidence 9999999999998776449999999999999876
No 38
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.77 E-value=2.9e-19 Score=112.46 Aligned_cols=72 Identities=28% Similarity=0.560 Sum_probs=65.7
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccC------------CCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~------------~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
++.||.|.+||++++.+| ++||+|+. ++..|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus 2 i~~gd~V~v~Y~g~~~dG---~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCTTCEEEECCEECCTTS---CCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCEEEEEEEEEECCC---CEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcH
Confidence 688999999999998787 99999963 233599999999999999999999999999999999999
Q ss_pred CCcCCCC
Q 033778 84 YAYGAGG 90 (112)
Q Consensus 84 ~ayg~~~ 90 (112)
+|||+++
T Consensus 79 ~aYG~~~ 85 (151)
T 1ix5_A 79 KAYGNRN 85 (151)
T ss_dssp TSSCSCC
T ss_pred HHCCCCC
Confidence 9999875
No 39
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.69 E-value=1.8e-16 Score=114.11 Aligned_cols=87 Identities=26% Similarity=0.468 Sum_probs=78.0
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCCCC
Q 033778 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFP 92 (112)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~~~ 92 (112)
+..++.||.|.+||+++. || +.|++++. .|+.|.+|.+.+++||+++|.||++|+++.|.+|++.+||..+.
T Consensus 155 ~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l- 226 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-DG---EEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL- 226 (432)
T ss_dssp SSCCCTTCEEEECEEEES-SS---CBCSSCCC---SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-
T ss_pred CCCCCCCCEEEEEEEEee-CC---eEccCCCc---cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-
Confidence 456999999999999994 77 99999874 69999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCeEEEEEEEEEeC
Q 033778 93 QWGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 93 ~~~ip~~~~l~~~v~l~~v~ 112 (112)
++.+++|+|+|++|+
T Consensus 227 -----ag~~~~F~V~v~~v~ 241 (432)
T 1w26_A 227 -----KGKAAKFAINLKKVE 241 (432)
T ss_dssp -----SSCEEEEEEECCEEC
T ss_pred -----CCceEEEEEEEEEEe
Confidence 446999999999874
No 40
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.67 E-value=1.9e-16 Score=100.17 Aligned_cols=65 Identities=22% Similarity=0.326 Sum_probs=61.0
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGG 90 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~ 90 (112)
++.||.|.+||+++ .+| ++||+++ +.|.+|.+++++||++||.+|++|+++++.|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~-~dG---~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEG---EVLDQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETT---EEEEEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-ECC---EEEEeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 67899999999999 788 9999985 88999999999999999999999999999999999999864
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.61 E-value=7.3e-15 Score=105.83 Aligned_cols=100 Identities=31% Similarity=0.572 Sum_probs=89.0
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCC---CccccHHHHhcCCCCCcEEE
Q 033778 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---SVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 2 Gi~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~---~~~~g~~~al~~m~~Ge~~~ 77 (112)
++.++++++|.|.. |..||.|.+||++++ +| ++|++. ++.|.+|.+ .++++|+.|+..|+.|+++.
T Consensus 147 ~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g---~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~ 216 (457)
T 1kt0_A 147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG---RMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCI 216 (457)
T ss_dssp SEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEE
T ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC---eEEecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEE
Confidence 56788899999865 999999999999998 77 999973 789999966 47899999999999999999
Q ss_pred EEECCCCCcCCCCCCCCCCCCCCeEEEEEEEEEe
Q 033778 78 LRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 111 (112)
Q Consensus 78 i~vp~~~ayg~~~~~~~~ip~~~~l~~~v~l~~v 111 (112)
+.++|.++|+..|.....||+++.+.|.+.+.++
T Consensus 217 l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~ 250 (457)
T 1kt0_A 217 LYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSF 250 (457)
T ss_dssp EEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEECcccccCCCCCcccCCCCCCEEEEEhhhhhc
Confidence 9999999999998765559999999999998765
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.60 E-value=1.2e-15 Score=108.59 Aligned_cols=86 Identities=24% Similarity=0.456 Sum_probs=75.5
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCCCCC
Q 033778 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQ 93 (112)
Q Consensus 14 ~~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~~~~ 93 (112)
..++.||.|.+||+++. || +.|+++.. .|+.|.+|.+.+++||+++|.||++|+++.+.++++..|+..+.
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-- 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DG---VEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-- 229 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SS---SCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT--
T ss_pred CCCCCCCEEEEEEEEEE-CC---EEccCCCc---cceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC--
Confidence 45899999999999994 77 89998853 69999999999999999999999999999999997788886543
Q ss_pred CCCCCCCeEEEEEEEEEeC
Q 033778 94 WGIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 94 ~~ip~~~~l~~~v~l~~v~ 112 (112)
++.+++|+|+|++|+
T Consensus 230 ----aGk~~~F~V~v~~i~ 244 (392)
T 1t11_A 230 ----KGKAAKFAIKVNKVE 244 (392)
T ss_dssp ----SSCEEEECCCEEEEE
T ss_pred ----CCCeEEEEEEEEEEE
Confidence 456999999999874
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.63 E-value=8.2e-08 Score=69.18 Aligned_cols=73 Identities=15% Similarity=0.276 Sum_probs=60.2
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCCcCCCCCCCC
Q 033778 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQW 94 (112)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~i~vp~~~ayg~~~~~~~ 94 (112)
.++.||.|.++|+++ .|| ..|+++.. .++.+.+|.+. + |+++|.||++|+.+.|.+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG---~~~~~~~~---~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF------------ 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEE---GKKLTSRE---YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY------------ 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTT---SCEEEEEE---EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE------------
T ss_pred ccCCCCEEEEEEEEE-ECC---EECcCCCC---CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee------------
Confidence 478999999999988 477 88987643 47888888776 3 99999999999999999854
Q ss_pred CCCCCCeEEEEEEEEEeC
Q 033778 95 GIQPNSVLDFEIQVLQVE 112 (112)
Q Consensus 95 ~ip~~~~l~~~v~l~~v~ 112 (112)
++.+..|.|+|.+|+
T Consensus 212 ---aGk~a~F~VtV~~Ik 226 (433)
T 3gty_X 212 ---EGKKYTYKLEVEEVY 226 (433)
T ss_dssp ---TTEEEEEEEEEEEEE
T ss_pred ---CCCeEEEEEEEEEEE
Confidence 234899999999874
No 44
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=54.73 E-value=36 Score=27.14 Aligned_cols=65 Identities=18% Similarity=0.181 Sum_probs=45.7
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecc--------------cC----------CCCccEEEEeCCCCccccHHHHhcCCC
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWST--------------KD----------PGQQPFTFQIGKGSVIKGWDEGVMGMQ 71 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t--------------~~----------~~~~~~~~~~g~~~~~~g~~~al~~m~ 71 (112)
+..|+.+.|.|+..+...+..+.-+.+ |. .....+.|.+|.+.+.+-++..+..|.
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms 640 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMT 640 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCC
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeecc
Confidence 689999999999998643211111001 00 012478899999999999999999999
Q ss_pred CCcEEEEEE
Q 033778 72 VGEVARLRC 80 (112)
Q Consensus 72 ~Ge~~~i~v 80 (112)
.|+...|..
T Consensus 641 ~gqT~~F~~ 649 (950)
T 3htx_A 641 VGEYASFKM 649 (950)
T ss_dssp TTCEEEEEE
T ss_pred ccceeEEec
Confidence 999998773
No 45
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=50.25 E-value=15 Score=21.88 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=21.2
Q ss_pred ccccHHHHhcCCCCCcEEEEEECCC
Q 033778 59 VIKGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 59 ~~~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
....+-.||.|.++||.+.+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3457899999999999999988763
No 46
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=47.56 E-value=17 Score=22.16 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=20.6
Q ss_pred ccccHHHHhcCCCCCcEEEEEECC
Q 033778 59 VIKGWDEGVMGMQVGEVARLRCSP 82 (112)
Q Consensus 59 ~~~g~~~al~~m~~Ge~~~i~vp~ 82 (112)
....+-.||.|.++||.+.+..|.
T Consensus 121 ~~SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 121 DASPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp TTSHHHHHHTTCCTTCEEEEEETT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 345788999999999999998875
No 47
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=44.30 E-value=15 Score=22.04 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=20.4
Q ss_pred ccccHHHHhcCCCCCcEEEEEECC
Q 033778 59 VIKGWDEGVMGMQVGEVARLRCSP 82 (112)
Q Consensus 59 ~~~g~~~al~~m~~Ge~~~i~vp~ 82 (112)
....+-.||.|.++||.+.+..|.
T Consensus 93 ~~SPlG~ALlGk~vGD~v~v~~P~ 116 (141)
T 2pn0_A 93 ILAPVGSALLGLAQGDEIEWPKPG 116 (141)
T ss_dssp TTSTTHHHHTTCBTTCEEEEECTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 445788999999999999997765
No 48
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=43.69 E-value=18 Score=22.13 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=21.0
Q ss_pred CccccHHHHhcCCCCCcEEEEEECC
Q 033778 58 SVIKGWDEGVMGMQVGEVARLRCSP 82 (112)
Q Consensus 58 ~~~~g~~~al~~m~~Ge~~~i~vp~ 82 (112)
+....+-.||.|.++||.+.+..|.
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~ 143 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPA 143 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSS
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCC
Confidence 3456799999999999999997765
No 49
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=41.91 E-value=12 Score=21.55 Aligned_cols=22 Identities=18% Similarity=0.672 Sum_probs=19.3
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
.+++.+.|++++..|++|+...
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 4678999999999999999765
No 50
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=41.03 E-value=51 Score=18.96 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=18.7
Q ss_pred CCCCCCCEEEE------EEEEEEeCCCceeeEe
Q 033778 14 PKPVAGQKVTV------HCTGYGKNGDLSQKFW 40 (112)
Q Consensus 14 ~~~~~gd~V~v------~y~~~~~~g~~~~~~~ 40 (112)
++|+.||.+.+ |+-++..|| .++-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg---~ViH 35 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDG---YVIH 35 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETT---EEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCC---eEEE
Confidence 34999999976 788888887 7764
No 51
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=40.91 E-value=47 Score=20.00 Aligned_cols=22 Identities=9% Similarity=0.220 Sum_probs=17.3
Q ss_pred ccHHHHhcCCCCCcEEEEEECCC
Q 033778 61 KGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 61 ~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
.+=..-|+.|++||.+.|+ |..
T Consensus 29 ~~arn~lr~Mk~GD~~~fY-~~~ 50 (147)
T 2p5d_A 29 ERYKNTINKVKVGDKLIIY-EIQ 50 (147)
T ss_dssp GGGHHHHTTCCTTCEEEEE-ECC
T ss_pred HHHHHHHHhCCCCCEEEEE-Eec
Confidence 3446678899999999999 543
No 52
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=34.14 E-value=37 Score=20.42 Aligned_cols=20 Identities=5% Similarity=0.147 Sum_probs=17.2
Q ss_pred HHHhcCCCCCcEEEEEECCC
Q 033778 64 DEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 64 ~~al~~m~~Ge~~~i~vp~~ 83 (112)
...|+.|++||++.|+.+..
T Consensus 29 rn~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHHHTTCCTTCEEEEEECCE
T ss_pred HHHHHhCCCCCEEEEEEccc
Confidence 45788999999999999865
No 53
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=33.92 E-value=25 Score=19.30 Aligned_cols=23 Identities=35% Similarity=0.819 Sum_probs=19.4
Q ss_pred CCCCccccHHHHhcCCCCCcEEE
Q 033778 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 55 g~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
..+.+.+.|++++..|++|+...
T Consensus 60 ~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 60 GRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cCCCCCHHHHHHHHcCCCCCccc
Confidence 35678899999999999998754
No 54
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=31.70 E-value=26 Score=18.97 Aligned_cols=22 Identities=18% Similarity=0.471 Sum_probs=18.9
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
.+.+.+.|++++..|++|+...
T Consensus 56 ~~~l~~~f~~a~~~l~~G~is~ 77 (93)
T 1zk6_A 56 EGQMDETFSKAAFKLKTGEVSD 77 (93)
T ss_dssp TTSSCTTHHHHHHHSCTTCBCC
T ss_pred cccCCHHHHHHHHcCCCCCccc
Confidence 5678999999999999998653
No 55
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=31.21 E-value=15 Score=22.44 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=17.7
Q ss_pred ccccHHHHhcCCCCCcEEEEEECC
Q 033778 59 VIKGWDEGVMGMQVGEVARLRCSP 82 (112)
Q Consensus 59 ~~~g~~~al~~m~~Ge~~~i~vp~ 82 (112)
....+-.||.|.++||.+.+..|.
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~ 145 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPG 145 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 446789999999999999987765
No 56
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=31.18 E-value=33 Score=18.95 Aligned_cols=23 Identities=4% Similarity=0.058 Sum_probs=19.5
Q ss_pred CCCccccHHHHhcCCCCCcEEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVARL 78 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~i 78 (112)
.+.+.+.|++++..|++|+....
T Consensus 65 ~~~l~~~f~~a~~~l~~G~is~p 87 (103)
T 2pv1_A 65 IQELPGIFAQALSTAKKGDIVGP 87 (103)
T ss_dssp GGGSCHHHHHHTTTCCTTCEEEE
T ss_pred hhhcCHHHHHHHHcCCCCCeecc
Confidence 35788999999999999998753
No 57
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=31.00 E-value=25 Score=19.01 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.4
Q ss_pred CCCccccHHHHhcCCCCCcEEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVARL 78 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~i 78 (112)
.+.+.+.|++++..|++|+....
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~p 76 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTGP 76 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEEE
T ss_pred CcccCHHHHHHHHhCCCCCcCCc
Confidence 35788999999999999998653
No 58
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=30.88 E-value=24 Score=20.17 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=19.7
Q ss_pred CCCccccHHHHhcCCCCCcEEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVARL 78 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~i 78 (112)
.+.+.+.|++++..|++|+....
T Consensus 66 ~~~l~~~f~~a~~~l~~GeiS~p 88 (112)
T 3gpk_A 66 LAQLPTELATTAASMGPGQLAGP 88 (112)
T ss_dssp GGGSCHHHHHHHHHCCTTCEEEE
T ss_pred ccccCHHHHHHHHhCCCCCccce
Confidence 46788999999999999998754
No 59
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=29.99 E-value=92 Score=18.65 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=21.0
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVH 25 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~ 25 (112)
+|....-..+|.|.-+++.|.|.|.
T Consensus 62 ngk~VtAyIPG~GhnlqEhs~VLVr 86 (135)
T 2vqe_L 62 SGYEVTAYIPGEGHNLQEHSVVLIR 86 (135)
T ss_dssp TSCEEEEECCSSCCCCCTTCEEEEE
T ss_pred CCCEEEEEcCCCCCccCcCCEEEEc
Confidence 3566777889999889999999988
No 60
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=27.93 E-value=56 Score=17.33 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=22.5
Q ss_pred CCcccc----HHHHhcCCCCCcEEEEEECCCCC
Q 033778 57 GSVIKG----WDEGVMGMQVGEVARLRCSPDYA 85 (112)
Q Consensus 57 ~~~~~g----~~~al~~m~~Ge~~~i~vp~~~a 85 (112)
+..+|. ..++|..|..|+..++++.-..+
T Consensus 17 Gl~CP~Pvl~~kkal~~l~~G~~l~V~~dd~~a 49 (82)
T 3lvj_C 17 GLRCPEPVMMVRKTVRNMQPGETLLIIADDPAT 49 (82)
T ss_dssp TCCTTHHHHHHHHHHHTSCTTCEEEEEECCTTH
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEEEEECCccH
Confidence 445554 77899999999999999876543
No 61
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=27.79 E-value=80 Score=17.53 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=19.4
Q ss_pred HHHHhcCCCCCcEEEEEECCCCC
Q 033778 63 WDEGVMGMQVGEVARLRCSPDYA 85 (112)
Q Consensus 63 ~~~al~~m~~Ge~~~i~vp~~~a 85 (112)
..++|..|..|+..++++.-..+
T Consensus 44 tkkaL~~l~~Ge~L~Vl~dd~~a 66 (97)
T 1je3_A 44 TLEAMPQLKKGEILEVVSDCPQS 66 (97)
T ss_dssp HHHHTTTCCSSCEEEEEEBCSSS
T ss_pred HHHHHHcCCCCCEEEEEECCcch
Confidence 67899999999999999886543
No 62
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=26.00 E-value=27 Score=18.80 Aligned_cols=12 Identities=42% Similarity=0.678 Sum_probs=9.5
Q ss_pred CCCCcEEEEEEC
Q 033778 70 MQVGEVARLRCS 81 (112)
Q Consensus 70 m~~Ge~~~i~vp 81 (112)
|++|+++++.-|
T Consensus 1 mk~GdrVrV~~s 12 (75)
T 1dj7_B 1 MNVGDRVRVTSS 12 (75)
T ss_dssp CCTTCEEEECSC
T ss_pred CCCCCEEEEccc
Confidence 789999987643
No 63
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=25.56 E-value=23 Score=20.04 Aligned_cols=22 Identities=5% Similarity=0.225 Sum_probs=18.7
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
.+.+.+.|++++..|++|+...
T Consensus 70 ~~~l~~~f~~a~~~l~~Geis~ 91 (110)
T 4g2p_A 70 PDIFDPAFRDALTKLHKGQISA 91 (110)
T ss_dssp GGGSCHHHHHHHHTCCTTCBCC
T ss_pred ccccCHHHHHHHHcCCCCCcCc
Confidence 3578899999999999999753
No 64
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=25.53 E-value=24 Score=23.37 Aligned_cols=23 Identities=17% Similarity=0.345 Sum_probs=18.9
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEE
Q 033778 1 MGIEKQILTPGNGPKPVAGQKVTVHC 26 (112)
Q Consensus 1 ~Gi~~~~~~~G~g~~~~~gd~V~v~y 26 (112)
.|++++|++.|. +..||.|.+.-
T Consensus 154 ~G~y~rVl~~G~---V~~GD~v~l~~ 176 (246)
T 1o65_A 154 VGWLYSVIAPGK---VSADAPLELVS 176 (246)
T ss_dssp CCEEEEEEECEE---EETTSCEEEEE
T ss_pred cEEEEEEeeCcE---EcCCCEEEEec
Confidence 389999999876 88999987763
No 65
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=25.42 E-value=1.4e+02 Score=19.26 Aligned_cols=51 Identities=20% Similarity=0.161 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCC---------ccccHHHHhcCCCCCcEE
Q 033778 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---------VIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~~ 76 (112)
.++.||.|.+++-... +| -.-|. ..+|.+|... +..+.+.++..+++|-++
T Consensus 84 ~l~~Gdlv~iD~g~~~-~G---Y~sD~-------tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~ 143 (264)
T 3tb5_A 84 VLKDGDLIKVDMCVDL-KG---AISDS-------CWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRI 143 (264)
T ss_dssp BCCTTCEEEEEEEEEE-TT---EEEEE-------EEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBH
T ss_pred cccCCCEEEEecccee-cc---eeeec-------ccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCH
Confidence 4899999999997764 55 33333 3445666432 235677778888888653
No 66
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=24.98 E-value=31 Score=19.18 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=18.1
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~ 76 (112)
.+.+.+.|++++..|++|+..
T Consensus 57 ~~~l~~~f~~a~~~l~~G~vs 77 (101)
T 3ui4_A 57 RGSMVGPFQEAAFALPVSGMD 77 (101)
T ss_dssp TTSSCHHHHHHHHTSCCCBTT
T ss_pred CCCCCHHHHHHHHhCCCCCCc
Confidence 467889999999999999854
No 67
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=24.91 E-value=31 Score=19.37 Aligned_cols=22 Identities=27% Similarity=0.551 Sum_probs=18.7
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
.+.+.+.|++++..|++|+...
T Consensus 75 ~~~l~~~f~~a~~~l~~G~is~ 96 (111)
T 2jzv_A 75 KGQTDKDFEKALFKLKDGEVSE 96 (111)
T ss_dssp TTSSCHHHHHHHHTCCTTCBCC
T ss_pred CCcccHHHHHHHHhCCCCCcCc
Confidence 4678899999999999998754
No 68
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=24.46 E-value=30 Score=21.30 Aligned_cols=22 Identities=18% Similarity=0.592 Sum_probs=19.0
Q ss_pred CCCCccccHHHHhcCCCCCcEE
Q 033778 55 GKGSVIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 55 g~~~~~~g~~~al~~m~~Ge~~ 76 (112)
..+.+.+.|++++..|++|+..
T Consensus 129 ~~~~l~~~f~~a~f~l~~GeiS 150 (166)
T 3tc5_A 129 SRGQMQKPFEDASFALRTGEMS 150 (166)
T ss_dssp CTTSSCHHHHHHHHHSCTTCBC
T ss_pred cccccCHHHHHHHHhCCCCCCc
Confidence 4567899999999999999964
No 69
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=23.17 E-value=41 Score=20.76 Aligned_cols=23 Identities=30% Similarity=0.621 Sum_probs=19.2
Q ss_pred CCCCccccHHHHhcCCCCCcEEE
Q 033778 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 55 g~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
..+.+.+.|++++..|++|+...
T Consensus 140 ~~~~l~~~f~~a~f~L~~GeiS~ 162 (177)
T 1yw5_A 140 SKGQMQPPFEEAAFNLHVGEVSN 162 (177)
T ss_dssp CTTSSCHHHHHHHHTSCTTCBCC
T ss_pred cccccCHHHHHHHHcCCCCCcCC
Confidence 45678899999999999998643
No 70
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=23.16 E-value=35 Score=20.26 Aligned_cols=23 Identities=26% Similarity=0.710 Sum_probs=19.1
Q ss_pred CCCCccccHHHHhcCCCCCcEEE
Q 033778 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (112)
Q Consensus 55 g~~~~~~g~~~al~~m~~Ge~~~ 77 (112)
..+.+.+.|++++..|++|+...
T Consensus 102 ~~~~l~~~f~~a~~~l~~GeiS~ 124 (139)
T 1j6y_A 102 GRGQMQKPFEEATYALKVGDISD 124 (139)
T ss_dssp SSSSSCTHHHHHHHHCCSSSCCS
T ss_pred cccccCHHHHHHHHcCCCCCccc
Confidence 34678899999999999998653
No 71
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=23.00 E-value=75 Score=17.64 Aligned_cols=22 Identities=14% Similarity=0.172 Sum_probs=19.0
Q ss_pred HHHHhcCCCCCcEEEEEECCCC
Q 033778 63 WDEGVMGMQVGEVARLRCSPDY 84 (112)
Q Consensus 63 ~~~al~~m~~Ge~~~i~vp~~~ 84 (112)
..+||..|..|+..++++.-..
T Consensus 43 tkkaL~~l~~Ge~L~Vl~dd~~ 64 (98)
T 1jdq_A 43 TKRALQNMKPGEILEVWIDYPM 64 (98)
T ss_dssp HHHHHHTCCTTCEEEEEESSCT
T ss_pred HHHHHHhCCCCCEEEEEECCcc
Confidence 6679999999999999987655
No 72
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=22.97 E-value=28 Score=20.30 Aligned_cols=21 Identities=19% Similarity=0.613 Sum_probs=18.3
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 033778 56 KGSVIKGWDEGVMGMQVGEVA 76 (112)
Q Consensus 56 ~~~~~~g~~~al~~m~~Ge~~ 76 (112)
.+.+.+.|++++..|++|+..
T Consensus 87 ~~~l~~~f~~a~f~l~~GeiS 107 (123)
T 3i6c_A 87 RGQMQKPFEDASFALRTGEMS 107 (123)
T ss_dssp TTTSCHHHHHHHHHSCTTCBC
T ss_pred CCCCCHHHHHHHHhCCCCCcc
Confidence 467899999999999999964
No 73
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=22.73 E-value=53 Score=17.57 Aligned_cols=15 Identities=7% Similarity=0.246 Sum_probs=13.1
Q ss_pred hcCCCCCcEEEEEEC
Q 033778 67 VMGMQVGEVARLRCS 81 (112)
Q Consensus 67 l~~m~~Ge~~~i~vp 81 (112)
|.++++|++++|.+.
T Consensus 51 l~~lk~Gd~V~F~~~ 65 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFV 65 (80)
T ss_dssp ECCCCTTCEEEEEEE
T ss_pred hhcCCCCCEEEEEEE
Confidence 678999999999874
No 74
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=22.50 E-value=53 Score=17.95 Aligned_cols=15 Identities=7% Similarity=0.246 Sum_probs=13.1
Q ss_pred hcCCCCCcEEEEEEC
Q 033778 67 VMGMQVGEVARLRCS 81 (112)
Q Consensus 67 l~~m~~Ge~~~i~vp 81 (112)
|.++++|++++|.+.
T Consensus 59 l~~lk~Gd~V~F~~~ 73 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFV 73 (88)
T ss_dssp ECCCCTTCEEEEEEE
T ss_pred hhcCCCCCEEEEEEE
Confidence 678999999999874
No 75
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=22.16 E-value=2e+02 Score=19.85 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=30.7
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEecccCCCCccEEEEeCCCC--c----cccHHHHhcCCCCCcE
Q 033778 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS--V----IKGWDEGVMGMQVGEV 75 (112)
Q Consensus 16 ~~~gd~V~v~y~~~~~~g~~~~~~~~t~~~~~~~~~~~~g~~~--~----~~g~~~al~~m~~Ge~ 75 (112)
++.||.|.|++-... || -.-|. ..++.+|... + ...++.|+..+++|-+
T Consensus 121 L~~GDiV~ID~G~~~-dG---Y~sD~-------arT~~vg~~~~~l~~~~~~al~aai~~~~pG~~ 175 (358)
T 3fm3_A 121 LKEDDVLKIDFGTHS-DG---RIMDS-------AFTVAFKENLEPLLVAAREGTETGIKSLGVDVR 175 (358)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEE-------EEEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred ecCCCEEEEEeeEEE-CC---EEEEE-------EEeccccccchhHHHHHHHHHHHHHHhhhcCCc
Confidence 899999999998876 66 44444 3445665321 1 2345566666666543
No 76
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=21.52 E-value=72 Score=22.14 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=20.3
Q ss_pred ccHHHHhcCCCCCcEEEEEECCC
Q 033778 61 KGWDEGVMGMQVGEVARLRCSPD 83 (112)
Q Consensus 61 ~g~~~al~~m~~Ge~~~i~vp~~ 83 (112)
..+.+++..|+.|+..+++.++.
T Consensus 336 ~~~~~~~~~~~~g~~~~v~~~~~ 358 (373)
T 1okg_A 336 AEVQSAATHLHAGEAATVYFKSG 358 (373)
T ss_dssp HHHHHHHTTCBTTCEEEEEETTS
T ss_pred HHHHHHHHhcCCCCcEEEEEccC
Confidence 35899999999999999998874
No 77
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=20.17 E-value=56 Score=20.13 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=15.5
Q ss_pred HHHhcCCCCCcEEEEEECC
Q 033778 64 DEGVMGMQVGEVARLRCSP 82 (112)
Q Consensus 64 ~~al~~m~~Ge~~~i~vp~ 82 (112)
..-|+.|++||.+.|+-..
T Consensus 38 rN~mr~Mk~GD~~fFYHS~ 56 (155)
T 1zce_A 38 RNNMRAMKIGDKGFFYHSN 56 (155)
T ss_dssp HHHHHTCCTTCEEEEEETT
T ss_pred HHHHHhccCCCEEEEEEeC
Confidence 4557789999999999764
Done!