BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033782
MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT
SEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVERAN

High Scoring Gene Products

Symbol, full name Information P value
AT5G40460 protein from Arabidopsis thaliana 6.6e-26
AT1G10690 protein from Arabidopsis thaliana 2.9e-23
AT1G60783 protein from Arabidopsis thaliana 1.6e-17
AT3G27630 protein from Arabidopsis thaliana 1.6e-13
AT1G51355 protein from Arabidopsis thaliana 1.3e-06
AT3G20898 protein from Arabidopsis thaliana 5.5e-06
AT5G02220 protein from Arabidopsis thaliana 5.0e-05
AT5G02420 protein from Arabidopsis thaliana 0.00057
AT1G08180 protein from Arabidopsis thaliana 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033782
        (111 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155657 - symbol:AT5G40460 "AT5G40460" species...   293  6.6e-26   1
TAIR|locus:2196459 - symbol:AT1G10690 species:3702 "Arabi...   268  2.9e-23   1
TAIR|locus:4515102692 - symbol:AT1G60783 "AT1G60783" spec...   214  1.6e-17   1
TAIR|locus:2089169 - symbol:AT3G27630 "AT3G27630" species...   176  1.6e-13   1
TAIR|locus:504956327 - symbol:AT1G51355 "AT1G51355" speci...   111  1.3e-06   1
TAIR|locus:5019474757 - symbol:AT3G20898 "AT3G20898" spec...   105  5.5e-06   1
TAIR|locus:2185213 - symbol:AT5G02220 species:3702 "Arabi...    96  5.0e-05   1
TAIR|locus:2181728 - symbol:AT5G02420 species:3702 "Arabi...    86  0.00057   1
TAIR|locus:2199998 - symbol:AT1G08180 species:3702 "Arabi...    85  0.00072   1


>TAIR|locus:2155657 [details] [associations]
            symbol:AT5G40460 "AT5G40460" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
            evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
            ProtClustDB:PLN03031 EMBL:BT024675 IPI:IPI00535516
            RefSeq:NP_198862.1 UniGene:At.21072 IntAct:Q29Q81 STRING:Q29Q81
            EnsemblPlants:AT5G40460.1 GeneID:834044 KEGG:ath:AT5G40460
            TAIR:At5g40460 eggNOG:NOG277841 HOGENOM:HOG000090819
            InParanoid:Q29Q81 OMA:YNEEEEC PhylomeDB:Q29Q81
            Genevestigator:Q29Q81 Uniprot:Q29Q81
        Length = 112

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 60/110 (54%), Positives = 78/110 (70%)

Query:     1 MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTN-PVPTAVDKEVDS---GTDEELS 56
             MG S K Q +GGLES+GK+WVIAGI +RA LKP+ T    P  +  EV+      +EE S
Sbjct:     1 MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query:    57 TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPP-DLESVFIR 105
             TTPT+++ +IP  L CP APRKR+ +LKC  + VREFF+PP DLE+VF+R
Sbjct:    61 TTPTAKETKIPELLECPPAPRKRRPALKCRSNVVREFFTPPSDLETVFLR 110


>TAIR|locus:2196459 [details] [associations]
            symbol:AT1G10690 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007354
            ProtClustDB:PLN03031 HOGENOM:HOG000090819 EMBL:BT012351
            EMBL:BT012362 IPI:IPI00539918 PIR:C86240 RefSeq:NP_172539.1
            UniGene:At.43217 IntAct:Q9SAD3 STRING:Q9SAD3
            EnsemblPlants:AT1G10690.1 GeneID:837612 KEGG:ath:AT1G10690
            TAIR:At1g10690 eggNOG:NOG267702 InParanoid:Q9SAD3 OMA:VRIPRVP
            PhylomeDB:Q9SAD3 Genevestigator:Q9SAD3 Uniprot:Q9SAD3
        Length = 110

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 60/110 (54%), Positives = 76/110 (69%)

Query:     1 MGLSGKP--QVDGGL-ES-EGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELS 56
             MG SGKP  Q+DG + ES +GK+WVIAGIP R+PLK I  +P  T  + E      ++  
Sbjct:     1 MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETE----EQDQCP 56

Query:    57 TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGV-REFFSPPDLESVFIR 105
             TTPT+   RIP    CPAAP+KRK SLKC+Y  V R++FSPPDLE+VFI+
Sbjct:    57 TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVFIQ 106


>TAIR|locus:4515102692 [details] [associations]
            symbol:AT1G60783 "AT1G60783" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:DQ487450 IPI:IPI00775576
            RefSeq:NP_001117521.1 UniGene:At.68969 EnsemblPlants:AT1G60783.1
            GeneID:6240271 KEGG:ath:AT1G60783 TAIR:At1g60783 OMA:VFIYRTT
            PhylomeDB:Q1G3Y4 ProtClustDB:PLN03031 Genevestigator:Q1G3Y4
            Uniprot:Q1G3Y4
        Length = 106

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 53/109 (48%), Positives = 67/109 (61%)

Query:     1 MGLSGKP--QVDGGLE--SEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELS 56
             MG SGK   Q D      +EGK+ VI GI L + +KPI  +         V +  DE+L 
Sbjct:     1 MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLS------SSAVSNTEDEDLC 54

Query:    57 -TTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFI 104
              TTPT++  RIP  + CP AP+KRK +LK +Y G REFFSPPDLE+VFI
Sbjct:    55 PTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY-GPREFFSPPDLETVFI 102


>TAIR|locus:2089169 [details] [associations]
            symbol:AT3G27630 "AT3G27630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AB018114 ProtClustDB:PLN03031
            EMBL:DQ446707 IPI:IPI00523887 RefSeq:NP_189400.1 UniGene:At.65002
            EnsemblPlants:AT3G27630.1 GeneID:822385 KEGG:ath:AT3G27630
            TAIR:At3g27630 InParanoid:Q9LVX6 OMA:KKSQVSR PhylomeDB:Q9LVX6
            Genevestigator:Q9LVX6 Uniprot:Q9LVX6
        Length = 99

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 44/107 (41%), Positives = 64/107 (59%)

Query:     1 MGLSGKPQVDGGLESEGKRWVIAGIPLRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPT 60
             MG+S K QV   L+++GK+++ A   +RA LKP+ T  +    ++E + G    +  TPT
Sbjct:     1 MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKP--ERESEDG----ICITPT 54

Query:    61 SEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFFSPP-DLESVFIR 105
             +  A+ P    CPAAPRKR   LKC  + +R E+F PP D E VFI+
Sbjct:    55 ARGAKTPE---CPAAPRKRPPVLKCQ-NNIRIEYFVPPSDFELVFIQ 97


>TAIR|locus:504956327 [details] [associations]
            symbol:AT1G51355 "AT1G51355" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC006085
            EMBL:BT024784 IPI:IPI00548963 RefSeq:NP_683417.1 UniGene:At.49970
            IntAct:Q3ECS5 EnsemblPlants:AT1G51355.1 GeneID:841559
            KEGG:ath:AT1G51355 TAIR:At1g51355 eggNOG:NOG289010
            HOGENOM:HOG000209979 InParanoid:Q3ECS5 OMA:FAPPDVE
            ProtClustDB:CLSN2690457 Genevestigator:Q3ECS5 Uniprot:Q3ECS5
        Length = 116

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query:    36 TNPVPTAVDKEVDSGTDEELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFF 94
             T+P  TA    V +   E    TP  E +RIP  LTCP AP+K+K +  C     +  FF
Sbjct:    43 TSPTSTATPSPVSA---ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFF 97

Query:    95 SPPDLESVFI 104
             +PPD+E  F+
Sbjct:    98 APPDVELFFV 107


>TAIR|locus:5019474757 [details] [associations]
            symbol:AT3G20898 "AT3G20898" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 IPI:IPI00530562 RefSeq:NP_001154630.1
            UniGene:At.47866 EnsemblPlants:AT3G20898.1 GeneID:7922426
            KEGG:ath:AT3G20898 Uniprot:F4IWB3
        Length = 108

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query:    58 TPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVR-EFFSPPDLESVFIRHVER 109
             TP ++ +RIP  LTCP AP+K++ S  C     +  FF+PP++E  F+   +R
Sbjct:    56 TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFFVNAHDR 108


>TAIR|locus:2185213 [details] [associations]
            symbol:AT5G02220 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:BT025305
            IPI:IPI00516651 RefSeq:NP_568097.1 UniGene:At.33444 IntAct:Q1JPP8
            STRING:Q1JPP8 EnsemblPlants:AT5G02220.1 GeneID:831792
            KEGG:ath:AT5G02220 TAIR:At5g02220 eggNOG:NOG285592
            HOGENOM:HOG000238457 InParanoid:Q1JPP8 OMA:MAEEGCT PhylomeDB:Q1JPP8
            ProtClustDB:CLSN2917533 Genevestigator:Q1JPP8 Uniprot:Q1JPP8
        Length = 72

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 22/57 (38%), Positives = 28/57 (49%)

Query:    53 EELSTTPTSEDARIPAKLTCPAAPRKRKSSLKCNYSGVREFFSPPDLESVFIRHVER 109
             EE  TTP S   RIP    CP  PRK+   ++        +F PPDLE++F     R
Sbjct:    12 EEGCTTPRSTMYRIPVASVCPPPPRKKLMVVRKRDPPRNGYFQPPDLETLFYAQPRR 68


>TAIR|locus:2181728 [details] [associations]
            symbol:AT5G02420 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] GO:GO:0005634 EMBL:CP002688 GO:GO:0004860
            GO:GO:0006469 GO:GO:0007049 EMBL:AL162971 EMBL:AY086229
            IPI:IPI00531839 PIR:T48263 RefSeq:NP_195862.1 UniGene:At.33421
            UniGene:At.74213 IntAct:Q9LZ60 STRING:Q9LZ60
            EnsemblPlants:AT5G02420.1 GeneID:831836 KEGG:ath:AT5G02420
            TAIR:At5g02420 OMA:REIEMFF PhylomeDB:Q9LZ60 ProtClustDB:CLSN2916765
            Genevestigator:Q9LZ60 Uniprot:Q9LZ60
        Length = 115

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 27/72 (37%), Positives = 37/72 (51%)

Query:    27 LRAPLKPIYTNPVPTAVDKEVDSGTDEELSTTPTSEDARIP-AKLT-CPAAPRKRKSSLK 84
             +R P +P     +P + D E  +  +EE   TPTS D +IP  K T CP APRK K +  
Sbjct:    18 IRLPTRPELD--IPDS-DHEDPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRS 74

Query:    85 CNYSGVREFFSP 96
                SG +   +P
Sbjct:    75 ---SGTKRKLTP 83


>TAIR|locus:2199998 [details] [associations]
            symbol:AT1G08180 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0009888 "tissue development" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] EMBL:CP002684
            GO:GO:0005634 GO:GO:0004860 GO:GO:0006469 GO:GO:0007049
            EMBL:AC011438 EMBL:AC026875 EMBL:BT004747 EMBL:BT005800
            EMBL:AK227946 IPI:IPI00534098 PIR:B86216 RefSeq:NP_172296.1
            UniGene:At.42272 IntAct:Q9SGE2 STRING:Q9SGE2
            EnsemblPlants:AT1G08180.1 GeneID:837339 KEGG:ath:AT1G08180
            TAIR:At1g08180 HOGENOM:HOG000153460 OMA:IPEVETC PhylomeDB:Q9SGE2
            ProtClustDB:CLSN2912750 Genevestigator:Q9SGE2 Uniprot:Q9SGE2
        Length = 111

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 27/77 (35%), Positives = 32/77 (41%)

Query:    32 KPIYTNPVPTAVDKEVDSGTDEELST---TPTSEDARIPAKLTCPAAPRKRKSSL----K 84
             K +   P     +   DS   EEL     TPTS D +IP   TCP  PRKR   +    K
Sbjct:    12 KTVEQKPRSQEEEDHQDSSKKEELLESLCTPTSSDHKIPEVETCPPPPRKRPREISLTKK 71

Query:    85 CNYSGVREFFSPPDLES 101
                S    FF   D+ S
Sbjct:    72 TRLSKDLRFFEATDVGS 88


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      111       111   0.00091  102 3  11 23  0.39    31
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  118 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.01u 0.11s 14.12t   Elapsed:  00:00:01
  Total cpu time:  14.01u 0.11s 14.12t   Elapsed:  00:00:01
  Start:  Fri May 10 03:42:40 2013   End:  Fri May 10 03:42:41 2013

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