Query 033782
Match_columns 111
No_of_seqs 114 out of 144
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 10:08:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vgp_C Inner centromere protei 29.9 14 0.00049 21.8 0.5 14 91-104 16-29 (43)
2 1k4z_A CAP, adenylyl cyclase-a 16.9 31 0.0011 25.4 0.2 12 13-24 5-16 (159)
3 1k8f_A CAP, adenylyl cyclase-a 15.7 35 0.0012 25.1 0.2 12 13-24 4-15 (157)
4 2gk4_A Conserved hypothetical 13.5 67 0.0023 24.4 1.3 24 15-38 1-24 (232)
5 2b0r_A Possible adenyl cyclase 12.6 47 0.0016 25.5 0.2 14 11-24 43-56 (202)
6 3h09_A IGA1 protease, immunogl 10.7 83 0.0028 29.4 1.1 12 14-25 271-282 (989)
7 3sze_A Serine protease ESPP; p 9.9 92 0.0031 29.0 1.1 13 13-25 215-227 (968)
8 3syj_A Adhesion and penetratio 9.9 92 0.0031 29.1 1.1 13 14-26 226-238 (1011)
9 1wxr_A Haemoglobin protease; h 8.6 1.1E+02 0.0038 28.6 1.1 13 14-26 215-227 (1048)
10 3kg4_A Uncharacterized protein 8.4 1.3E+02 0.0043 23.4 1.2 19 17-38 50-68 (235)
No 1
>2vgp_C Inner centromere protein A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD6; 1.7A {Xenopus laevis} PDB: 2bfy_C* 2bfx_C* 2vrx_C* 2vgo_C* 3ztx_C*
Probab=29.90 E-value=14 Score=21.80 Aligned_cols=14 Identities=14% Similarity=0.707 Sum_probs=10.0
Q ss_pred ccccCCCchhHHhh
Q 033782 91 REFFSPPDLESVFI 104 (111)
Q Consensus 91 ~~FF~~PDLe~~F~ 104 (111)
+.||+++|++.+|-
T Consensus 16 ~Q~~~p~D~d~iFG 29 (43)
T 2vgp_C 16 QQYYKPIDVDRMYG 29 (43)
T ss_dssp HHHHSCCCHHHHTT
T ss_pred HHHccCCCHHHHcC
Confidence 34677778888874
No 2
>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A
Probab=16.87 E-value=31 Score=25.41 Aligned_cols=12 Identities=33% Similarity=0.731 Sum_probs=9.2
Q ss_pred ccCCCcceEEec
Q 033782 13 LESEGKRWVIAG 24 (111)
Q Consensus 13 ~~~~~kkwviag 24 (111)
++.+|+||+|-.
T Consensus 5 ~eL~g~KW~VEn 16 (159)
T 1k4z_A 5 KELVGNKWFIEN 16 (159)
T ss_dssp EEEETTEEEEEC
T ss_pred EEecCCEEEEEE
Confidence 567899999954
No 3
>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1
Probab=15.70 E-value=35 Score=25.14 Aligned_cols=12 Identities=50% Similarity=1.035 Sum_probs=9.4
Q ss_pred ccCCCcceEEec
Q 033782 13 LESEGKRWVIAG 24 (111)
Q Consensus 13 ~~~~~kkwviag 24 (111)
++.+|+||+|-.
T Consensus 4 ~eL~g~KW~VEn 15 (157)
T 1k8f_A 4 LELEGKKWRVEN 15 (157)
T ss_dssp EEEETTEEEEES
T ss_pred eEEeCCEEEEEe
Confidence 567799999954
No 4
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=13.46 E-value=67 Score=24.36 Aligned_cols=24 Identities=4% Similarity=0.079 Sum_probs=19.4
Q ss_pred CCCcceEEecccccCCCCceeeCC
Q 033782 15 SEGKRWVIAGIPLRAPLKPIYTNP 38 (111)
Q Consensus 15 ~~~kkwviagi~l~a~LkPi~t~~ 38 (111)
|.||+.+|.|-+-+-||.||..-.
T Consensus 1 ~~gk~vlVTgG~T~E~IDpVR~It 24 (232)
T 2gk4_A 1 SNAMKILVTSGGTSEAIDSVRSIT 24 (232)
T ss_dssp --CCEEEEECSBCEEESSSSEEEE
T ss_pred CCCCEEEEeCCCcccccCceeecc
Confidence 468999999999899999998763
No 5
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}
Probab=12.63 E-value=47 Score=25.45 Aligned_cols=14 Identities=7% Similarity=0.261 Sum_probs=10.5
Q ss_pred CcccCCCcceEEec
Q 033782 11 GGLESEGKRWVIAG 24 (111)
Q Consensus 11 ~~~~~~~kkwviag 24 (111)
..++.+|+||+|-.
T Consensus 43 P~~eL~G~KW~VEn 56 (202)
T 2b0r_A 43 PKVELQKDTYLVEN 56 (202)
T ss_dssp CEEEEETTEEEEEC
T ss_pred CeEEEeCCEEEEEe
Confidence 34667899999954
No 6
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta helix, hydrolase, M protease, secreted, transmembrane, virulence; 1.75A {Haemophilus influenzae}
Probab=10.67 E-value=83 Score=29.35 Aligned_cols=12 Identities=25% Similarity=0.756 Sum_probs=9.4
Q ss_pred cCCCcceEEecc
Q 033782 14 ESEGKRWVIAGI 25 (111)
Q Consensus 14 ~~~~kkwviagi 25 (111)
|...|||||.|.
T Consensus 271 D~~~~kWvl~Gv 282 (989)
T 3h09_A 271 DREKGKWLFLGS 282 (989)
T ss_dssp ETTTTEEEEEEE
T ss_pred ecccceEEEEEE
Confidence 455799999986
No 7
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A {Escherichia coli O157}
Probab=9.89 E-value=92 Score=28.98 Aligned_cols=13 Identities=38% Similarity=1.004 Sum_probs=10.3
Q ss_pred ccCCCcceEEecc
Q 033782 13 LESEGKRWVIAGI 25 (111)
Q Consensus 13 ~~~~~kkwviagi 25 (111)
.|...+||||.|.
T Consensus 215 YD~~~~KWvl~GV 227 (968)
T 3sze_A 215 YDNQKKKWVVAGT 227 (968)
T ss_dssp EETTTTEEEEEEE
T ss_pred EEcCCCeEEEEEE
Confidence 3456799999997
No 8
>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Probab=9.86 E-value=92 Score=29.12 Aligned_cols=13 Identities=38% Similarity=0.986 Sum_probs=10.0
Q ss_pred cCCCcceEEeccc
Q 033782 14 ESEGKRWVIAGIP 26 (111)
Q Consensus 14 ~~~~kkwviagi~ 26 (111)
|...+||||.|.-
T Consensus 226 D~~~~KWvl~Gv~ 238 (1011)
T 3syj_A 226 DAEKQKWLINGIL 238 (1011)
T ss_dssp ETTTTEEEEEEEE
T ss_pred EcCCCeEEEEEEe
Confidence 4557999999863
No 9
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=8.62 E-value=1.1e+02 Score=28.62 Aligned_cols=13 Identities=23% Similarity=0.838 Sum_probs=10.0
Q ss_pred cCCCcceEEeccc
Q 033782 14 ESEGKRWVIAGIP 26 (111)
Q Consensus 14 ~~~~kkwviagi~ 26 (111)
|.+.+||||.|..
T Consensus 215 D~~~kKWvLvGv~ 227 (1048)
T 1wxr_A 215 DTVQNKWVLVGVL 227 (1048)
T ss_dssp ETTTTEEEEEEEE
T ss_pred EcCCCeEEEEEEe
Confidence 3457999999964
No 10
>3kg4_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.95A {Mannheimia succiniciproducens}
Probab=8.42 E-value=1.3e+02 Score=23.41 Aligned_cols=19 Identities=42% Similarity=0.662 Sum_probs=12.7
Q ss_pred CcceEEecccccCCCCceeeCC
Q 033782 17 GKRWVIAGIPLRAPLKPIYTNP 38 (111)
Q Consensus 17 ~kkwviagi~l~a~LkPi~t~~ 38 (111)
.-.|||.+|.+ |+||++..
T Consensus 50 ~i~w~id~I~V---l~PIr~~s 68 (235)
T 3kg4_A 50 AINWVIDKIYV---LKPIRFES 68 (235)
T ss_dssp TEEEEEEEEEE---CSCCCEEE
T ss_pred ceEEEEEEEEE---cCceEEEE
Confidence 34699988876 55555543
Done!