BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033791
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAQ2|Y1754_ARATH Acetyltransferase At1g77540 OS=Arabidopsis thaliana GN=At1g77540
PE=1 SV=2
Length = 114
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 87/104 (83%)
Query: 8 KSEKEIPKIVWNESKRRFETEDKEAYVEYVVRENGKVMDLVHTYVPSSKRGLGLASHLCR 67
K E PKIVWNE KRRFETED EA++EY +R NGKVMDLVHTYVPS KRGLGLASHLC
Sbjct: 11 KMATEPPKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCV 70
Query: 68 AAFNHAKSHSMSIIPTCSYVSDTYLPRNPTWNSIIYSEDPRSII 111
AAF HA SHS+SIIP+CSYVSDT+LPRNP+W +I+SE +S I
Sbjct: 71 AAFEHASSHSISIIPSCSYVSDTFLPRNPSWKPLIHSEVFKSSI 114
>sp|Q5ZJI6|GTL3B_CHICK Protein GTLF3B OS=Gallus gallus GN=GTLF3B PE=3 SV=1
Length = 110
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 25/101 (24%)
Query: 10 EKEIPKIVWNESKRRFETEDKEAYVEYVVRENG--------------KVMDLVHTYVPSS 55
E+ P V ++ KRR ++ VR NG +++DL HT VP +
Sbjct: 11 EQGCPIQVEHDRKRR----------QFTVRLNGCHDRAVLLYEYVGKRIVDLQHTEVPDA 60
Query: 56 KRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPRNP 96
RG G+A HL +AA + + TC Y+ Y+ NP
Sbjct: 61 YRGRGIAKHLAKAALDFVVEEDLKAHLTCWYIQ-KYVKENP 100
>sp|Q9DBW3|GTL3B_MOUSE Protein GTLF3B OS=Mus musculus GN=Gtlf3b PE=2 SV=1
Length = 110
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV +++DL HT VP + RG G+A HL +AA + + TC Y+ Y+
Sbjct: 43 EYV---GKRIVDLQHTEVPDAYRGRGIAKHLAKAALDFVVEEDLKAHLTCWYIQ-KYVKE 98
Query: 95 NP 96
NP
Sbjct: 99 NP 100
>sp|Q8N6N6|GTL3B_HUMAN Protein GTLF3B OS=Homo sapiens GN=GTLF3B PE=3 SV=2
Length = 113
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV +++DL HT VP + RG G+A HL +AA + + TC Y+ Y+
Sbjct: 46 EYV---GKRIVDLQHTEVPDAYRGRGIAKHLAKAALDFVVEEDLKAHLTCWYIQ-KYVKE 101
Query: 95 NP 96
NP
Sbjct: 102 NP 103
>sp|Q66IM5|GTL3B_XENTR Protein GTLF3B OS=Xenopus tropicalis GN=gtlf3b PE=3 SV=1
Length = 109
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV K +DL HT VP + RG G+A HL +AA + + TC Y+ Y+
Sbjct: 42 EYV---GKKTVDLQHTEVPDAFRGRGIAKHLAKAAMDFVVEEDLKAHLTCWYIQ-KYVKE 97
Query: 95 NP 96
NP
Sbjct: 98 NP 99
>sp|A6QL79|GTL3B_BOVIN Protein GTLF3B OS=Bos taurus GN=GTLF3B PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV +++DL HT VP + RG G+A HL +AA + + TC Y+ ++
Sbjct: 46 EYV---GKRIVDLQHTEVPDAYRGRGIAKHLAKAALDFVVEEDLRAHVTCWYIQ-KFVKE 101
Query: 95 NP 96
NP
Sbjct: 102 NP 103
>sp|Q6IP48|GTL3B_XENLA Protein GTLF3B OS=Xenopus laevis GN=gtlf3b PE=3 SV=1
Length = 109
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV + K +DL HT VP + RG G+A HL +AA + + TC Y+ ++
Sbjct: 42 EYVGK---KTVDLQHTEVPDAFRGRGIAKHLAKAAMDFVVEEDLKAHLTCWYIQ-KFVKE 97
Query: 95 NP 96
NP
Sbjct: 98 NP 99
>sp|Q5D014|GTL3B_DANRE Protein GTLF3B OS=Danio rerio GN=gtlf3b PE=3 SV=1
Length = 110
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 35 EYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPR 94
EYV K +DL HT VP + RG +A HL +AA + + TC Y+ ++
Sbjct: 43 EYV---GKKTVDLQHTEVPEAYRGREIAKHLAKAAMDFVVEEDLKAHLTCWYIQ-KFVKE 98
Query: 95 NP 96
NP
Sbjct: 99 NP 100
>sp|F5HAC7|UL16_HCMVM Capsid-binding protein UL94 OS=Human cytomegalovirus (strain
Merlin) GN=UL94 PE=3 SV=1
Length = 345
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 52 VPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDT--------YLPRNPTWNSIIY 103
+PS R + A+ +A + H + PT +YV T Y+P P S+I+
Sbjct: 206 IPSMTRLMAAATACGQAGCSFCTDHEGHVDPTGNYVGCTPDMGRCLCYVPCGPMTQSLIH 265
Query: 104 SEDP 107
+E+P
Sbjct: 266 NEEP 269
>sp|P16800|UL16_HCMVA Capsid-binding protein UL94 OS=Human cytomegalovirus (strain AD169)
GN=UL94 PE=3 SV=1
Length = 345
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 52 VPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDT--------YLPRNPTWNSIIY 103
+PS R + A+ +A + H + PT +YV T Y+P P S+I+
Sbjct: 206 IPSMTRLMAAATACGQAGCSFCTDHEGHVDPTGNYVGCTPDMGRCLCYVPCGPMTQSLIH 265
Query: 104 SEDP 107
+E+P
Sbjct: 266 NEEP 269
>sp|Q9QXS8|CMLO5_MOUSE Probable N-acetyltransferase CML5 OS=Mus musculus GN=Cml5 PE=2 SV=2
Length = 227
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 43 KVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMS 79
K M L H V S RG G+A L R F A+ S
Sbjct: 134 KQMQLFHLSVSSQHRGQGIAKALVRTVFQFARDQGYS 170
>sp|C4Z0G2|GLGA_EUBE2 Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI
C15-48) GN=glgA PE=3 SV=1
Length = 478
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 37 VVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPRNP 96
+VRE G + D V Y +G G F+ A ++ ++ +Y D Y
Sbjct: 398 IVRETGGLKDTVEPYNEYEGKGTG---------FSFANYNAHEMLGIVNYAKDVYYNHKR 448
Query: 97 TWNSII 102
WN I+
Sbjct: 449 EWNKIV 454
>sp|A8MYU2|KCNU1_HUMAN Potassium channel subfamily U member 1 OS=Homo sapiens GN=KCNU1
PE=1 SV=2
Length = 1149
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 32 AYVEYVVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDT- 90
AY ++ K DL V S++ L +A+ LC + S+ M ++ +Y S T
Sbjct: 385 AYTTFISGSAMKWEDLRRVAVESAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTR 444
Query: 91 ------------YLPRNPTWN 99
YLP+ P+WN
Sbjct: 445 IIIQILQSHNKVYLPKIPSWN 465
>sp|Q54W19|ABCD1_DICDI ABC transporter D family member 1 OS=Dictyostelium discoideum
GN=abcD1 PE=3 SV=1
Length = 734
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 7 TKSEKEIPKIVWNESKRRFETE---DKEAYVEYVVRENGKVMDLVHTYV 52
+K +K IPK + E +RFE + D+E + ++++ +V DL H ++
Sbjct: 580 SKKQKRIPKSIMRELFQRFEIDYLLDRERF----IKKSAQVNDLTHNWL 624
>sp|A9KMA3|GLGA_CLOPH Glycogen synthase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=glgA PE=3 SV=1
Length = 478
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 37 VVRENGKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPRNP 96
+VRE G ++D V Y G G F + +H M + T + + Y +
Sbjct: 398 IVRETGGLVDTVEPYNQHESTGTGF-------TFKNYNAHEM--LYTIRFAKEIYQDKKR 448
Query: 97 TWNSII 102
WN II
Sbjct: 449 EWNKII 454
>sp|Q8YYX9|GLGB_NOSS1 1,4-alpha-glucan branching enzyme GlgB OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=glgB PE=3 SV=1
Length = 764
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 5 MATKSEKEIPKIVWNESKRRFETEDKEAYVEYVVRENGKVMDLVHTYVPSS 55
M T + +++ +IVWN+ FE + + +NGK + +V Y+P++
Sbjct: 3 MTTIAPEQVNRIVWNQHHDPFEILG-----SHPIEQNGKTVWVVRAYLPNA 48
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,152,454
Number of Sequences: 539616
Number of extensions: 1569682
Number of successful extensions: 3735
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3720
Number of HSP's gapped (non-prelim): 22
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)