BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033795
(111 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 173 bits (439), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 93/98 (94%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR+E++KDIGSGNFGVA+L+RDK S EL AVKYI+RG+KIDE+V+REI+NHR+L+HPNI+
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 77
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAIVMEYA+GGELFERICNAGRFSEDE
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 115
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 173 bits (439), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 93/98 (94%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR+E++KDIGSGNFGVA+L+RDK S EL AVKYI+RG+KIDE+V+REI+NHR+L+HPNI+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAIVMEYA+GGELFERICNAGRFSEDE
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 173 bits (439), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 93/98 (94%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR+E++KDIGSGNFGVA+L+RDK S EL AVKYI+RG+KIDE+V+REI+NHR+L+HPNI+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAIVMEYA+GGELFERICNAGRFSEDE
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 171 bits (434), Expect = 8e-44, Method: Composition-based stats.
Identities = 75/98 (76%), Positives = 90/98 (91%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR++ +KDIGSGNFGVA+L+RDK + EL AVKYI+RG IDE+VQREI+NHR+L+HPNI+
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIV 79
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAI+MEYA+GGEL+ERICNAGRFSEDE
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDE 117
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 171 bits (433), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 93/98 (94%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR+E++KDIG+GNFGVA+L+RDK + EL AVKYI+RG+KIDE+V+REI+NHR+L+HPNI+
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAIVMEYA+GGELFERICNAGRFSEDE
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 168 bits (425), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 91/98 (92%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
DR+E++KDIGSGNFGVA+L+RDK S EL AVKYI+RG+KI +V+REI+NHR+L+HPNI+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
RFKEV LTPT LAIVMEYA+GGELFERICNAGRFSEDE
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AVK I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AVK I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AVK I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 6 ILKD-IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE-----HVQREIMNHRALKHPN 59
IL D +G G FG K+ + + +G AVK + R QKI ++REI N + +HP+
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHAL 103
II+ +V TP+++ +VMEY +GGELF+ IC GR E E L
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL 121
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE-----HVQREIMNHRALKHPNIIRFK 64
+G G FG K+ + +G AVK + R QKI ++REI N + +HP+II+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHAL 103
+V TPT+ +VMEY +GGELF+ IC GR E E L
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE-----HVQREIMNHRALKHPNIIRFK 64
+G G FG K+ + +G AVK + R QKI ++REI N + +HP+II+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHAL 103
+V TPT+ +VMEY +GGELF+ IC GR E E L
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AV+ I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AV+ I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQR-EIMNHRALKHPNI 60
D FE+ ++G G + + K + + YA+K +++ +D+ + R EI L HPNI
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNI 110
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ KE+F TPTE+++V+E GGELF+RI G +SE
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE 147
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AVK I + Q +Q RE+ + L HPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + G E E A
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA 110
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G+ AVK I + Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +V EYA+GGE+F+ + GR E E A
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G A+K I + Q +Q RE+ + L HPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L ++MEYA+GGE+F+ + GR E E +
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ +LK IG GNF KL R +G A+K I + Q +Q RE+ + L HPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L ++MEYA+GGE+F+ + GR E E +
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+ + K IG GNF KL R +G AVK I + Q +Q RE+ + L HPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHA 102
++ EV T L +VMEYA+GGE+F+ + GR E E A
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D +E+ +++GSG F + + R K +G+ YA K+I++ + E ++RE+ R
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++HPNII ++F T++ +++E +GGELF+ + +EDE L
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 135
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D +E+ +++GSG F + + R K +G+ YA K+I++ + E ++RE+ R
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++HPNII ++F T++ +++E +GGELF+ + +EDE L
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 114
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D +E+ +++GSG F + + R K +G+ YA K+I++ + E ++RE+ R
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++HPNII ++F T++ +++E +GGELF+ + +EDE L
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 121
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEHVQREIMNHRALKHPNII 61
FE + +G+G F L +K +G+L+AVK I + + + ++ EI R +KH NI+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYFH 110
++++ +P L +VM+ +GGELF+RI G ++E + L+ YY H
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ HPNII +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEH--VQREIMNHRALKHPNII 61
I + +G G+FG KL + + A+K+I R +K D H V+REI + L+HP+II
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
+ +V TPT++ +V+EY AGGELF+ I R +EDE
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDE 109
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-EHVQREIMNHRALKHPN 59
+D ++I +++G+G FGV V ++ +G +A K++ + D E V++EI L+HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNA-GRFSEDEV 100
++ + F E+ ++ E+ +GGELFE++ + + SEDE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-EHVQREIMNHRALKHPN 59
+D ++I +++G+G FGV V ++ +G +A K++ + D E V++EI L+HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNA-GRFSEDEV 100
++ + F E+ ++ E+ +GGELFE++ + + SEDE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 110 H 110
H
Sbjct: 130 H 130
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 110 H 110
H
Sbjct: 130 H 130
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
M+++ L+ IG G+FG A LV+ G Y +K I + K E +RE+ +KH
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR---FSEDEV 100
PNI++++E F L IVM+Y GG+LF+RI NA + F ED++
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQI 127
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ +++E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-------EHVQREIMNHRA 54
D ++ +++GSG F V K R+K +G YA K+I++ + E ++RE+ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS-----YYF 109
++HPN+I EV+ T++ ++ E AGGELF+ + +E+E L YY
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 110 H 110
H
Sbjct: 131 H 131
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH-VQREIMNHRALKHPNI 60
D ++IL+++GSG FGV +K +G ++ K+I +D++ V+ EI L HP +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAG-RFSEDEV 100
I + F E+ +++E+ +GGELF+RI + SE EV
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 151
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE ++ +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +V+EYA GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE 141
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF+E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ H N+I +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ H N+I +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ H N+I +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ H N+I +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK-------IDEHVQREIMNHRA 54
D ++I +++GSG F + K R+K +G YA K+I++ Q E ++RE+ R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ H N+I +V+ T++ +++E +GGELF+ + SE+E + +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRALKHPNIIR 62
F ++ +GSG F LV+ + +G+L+A+K I++ D ++ EI + +KH NI+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 63 FKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++++ + T +VM+ +GGELF+RI G ++E + ++
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI 112
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF E
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+F+ +K +G+G+FG LV+ K SG YA+K + + + + EH E +A+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKID-EHVQREIMNHRALKH 57
DR++ + +G G+FG L +DK +G+ AVK I Q QK D E + RE+ + L H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI++ E F +V E GGELF+ I + RFSE
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 131
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKID-EHVQREIMNHRALKH 57
DR++ + +G G+FG L +DK +G+ AVK I Q QK D E + RE+ + L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI++ E F +V E GGELF+ I + RFSE
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY AGGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G +A+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ FE LK +G G FG LV++K +G YA+K +++ + + V + +R L +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + FSED
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 108
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ FE LK +G G FG LV++K +G YA+K +++ + + V + +R L +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + FSED
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 109
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G +A+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G +A+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ FE LK +G G FG LV++K +G YA+K +++ + + V + +R L +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + FSED
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 110
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKID-EHVQREIMNHRALKH 57
DR++ + +G G+FG L +DK +G+ AVK I Q QK D E + RE+ + L H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI++ E F +V E GGELF+ I + RFSE
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKID-EHVQREIMNHRALKH 57
DR++ + +G G+FG L +DK +G+ AVK I Q QK D E + RE+ + L H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI++ E F +V E GGELF+ I + RFSE
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKID-EHVQREIMNHRALKH 57
DR++ + +G G+FG L +DK +G+ AVK I Q QK D E + RE+ + L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI + E F +V E GGELF+ I + RFSE
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ FE LK +G G FG LV++K +G YA+K +++ + + V + +R L +
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + FSED
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPN 59
D F + +GSG FG LV ++ SG +K I R Q E ++ EI ++L HPN
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNA 92
II+ EVF + IVME GGEL ERI +A
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSA 114
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K IG+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ FE LK +G G FG LV++K +G YA+K +++ + + V + +R L +
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + FSED
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 248
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ K +G YA+K + + + + EH E +A+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRF E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P + + + F + L +VMEYA GGE+F + GRFSE
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P + + + F + L +VMEYA GGE+F + GRFSE
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 126
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALK----HPNIIRF 63
K +G G+F + + K S + +AVK I + +++ + Q+EI ALK HPNI++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEIT---ALKLCEGHPNIVKL 71
Query: 64 KEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
EVF +VME GGELFERI FSE E ++
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM 112
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEYA GGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 140
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K IG+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GG++F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K IG+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GG++F + GRFSE
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 108
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG----QKIDEHVQREIMNHRALKHPN 59
++I+K +G G+FG KL +G+ A+K I + + ++REI R L+HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
II+ +V + E+ +V+EY AG ELF+ I + SE E
Sbjct: 66 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQE 104
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG----QKIDEHVQREIMNHRALKHPN 59
++I+K +G G+FG KL +G+ A+K I + + ++REI R L+HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
II+ +V + E+ +V+EY AG ELF+ I + SE E
Sbjct: 75 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQE 113
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG----QKIDEHVQREIMNHRALKHPN 59
++I+K +G G+FG KL +G+ A+K I + + ++REI R L+HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
II+ +V + E+ +V+EY AG ELF+ I + SE E
Sbjct: 76 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQE 114
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG----QKIDEHVQREIMNHRALKHPN 59
++I+K +G G+FG KL +G+ A+K I + + ++REI R L+HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
II+ +V + E+ +V+EY AG ELF+ I + SE E
Sbjct: 70 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQE 108
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
+D F+I++ +G G FG L R+K + + A+K + + Q ++ ++REI L+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL--LSYYFHY 111
HPNI+R F + +++E+A GEL++ + GRF E + L+ HY
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---K 56
M+ F+ LK +G G FG LVR+K +G YA+K +++ I + V + R L +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
HP + K F T L VMEYA GGELF + F+E+
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 110
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
D +E+ +DIG G++ V K K + +AVK I + ++ D + EI+ R +HPNII
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKR-DPTEEIEIL-LRYGQHPNII 79
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
K+V+ + +V E GGEL ++I FSE E A+L +
Sbjct: 80 TLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRALK--- 56
+D FE ++ +G G+FG L R K +G+LYAVK +++ + D+ V+ + R L
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 57 -HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HP + + F TP L VME+ GG+L I + RF E
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE 123
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P + + + F + L +VMEYA GGE+F + GRF E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 141
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRF E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 141
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALK 56
+D+FE +K +G+G+FG LV+ +G YA+K + + + + EH E +A+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
P +++ + F + L +VMEY GGE+F + GRF E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
+R+ I+ +G G+FG +D+ + + YAVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
NI++ E+ + IV E GGELF+ I RFSE
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG---QKIDEHVQREIMNHRALKHP 58
+R+ I+ +G G+FG +D+ + + YAVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
NI++ E+ + IV E GGELF+ I RFSE
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG---QKIDEHVQREIMNHRALKHP 58
+R+ I+ +G G+FG +D+ + + YAVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
NI++ E+ + IV E GGELF+ I RFSE
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRG----QKIDEHVQREIMNHRALK 56
+ F+IL+ +G+G+FG L+R + +G YA+K +++ K EH E + +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFS 96
HP IIR F ++ ++M+Y GGELF + + RF
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP 104
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
+D F+I + +G G FG L R+K + + A+K + + Q ++ ++REI L+
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL--LSYYFHY 111
HPNI+R F + +++E+A GEL++ + GRF E + L+ HY
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
+D F+I + +G G FG L R+K + + A+K + + Q ++ ++REI L+
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL--LSYYFHY 111
HPNI+R F + +++E+A GEL++ + GRF E + L+ HY
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 130
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA GE+++ + +F E
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA GE+++ + +F E
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRA----LKH 57
DR++ +K +GSG +G L +DK +G A+K I++ +++ A L H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
PNI++ E F +VME GGELF+ I +FSE + ++
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRA----LKH 57
DR++ +K +GSG +G L +DK +G A+K I++ +++ A L H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
PNI++ E F +VME GGELF+ I +FSE
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE 103
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRD---KWSGELYAVKYIQRGQ-----KIDEHV--QREIM 50
++ FE+LK +G+G +G LVR +G+LYA+K +++ K EH +R+++
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 51 NHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVH 101
H + P ++ F T T+L ++++Y GGELF + RF+E EV
Sbjct: 113 EH-IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ 162
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
D +E+ +DIG G++ V K K + +AVK I + ++ D + EI+ R +HPNII
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEIL-LRYGQHPNII 79
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
K+V+ + +V E GGEL ++I FSE E A+L +
Sbjct: 80 TLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
+D FEI + +G G FG L R+K S + A+K + + Q ++ ++REI L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
HPNI+R F + +++EYA GEL++ + + F E ++
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
+G G FG + +G A K I+ RG K E V+ EI L H N+I+ + F
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 69 TPTELAIVMEYAAGGELFERICN 91
+ ++ +VMEY GGELF+RI +
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIID 179
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE--HVQREIMNHRALKHPNII 61
+E+ + IG+G F KL +GE+ A+K + + + ++ EI + L+H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
+ V T ++ +V+EY GGELF+ I + R SE+E
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEET 110
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 4 FEILKDIGSGNFGVAKLVRD---KWSGELYAVKYIQRG-----QKIDEHVQREIMNHRAL 55
FE+LK +G G+FG LVR SG LYA+K +++ ++ ++R+I+ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD--V 87
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HP +++ F T +L +++++ GG+LF R+ F+E++V
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 132
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 109
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 114
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 110
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+E+L IG+G++G + +R K G++ K + G + Q E+ R LKHPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 61 IRFKEVFL--TPTELAIVMEYAAGGELFERICNAGR 94
+R+ + + T T L IVMEY GG+L I +
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+E+L IG+G++G + +R K G++ K + G + Q E+ R LKHPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 61 IRFKEVFL--TPTELAIVMEYAAGGELFERICNAGR 94
+R+ + + T T L IVMEY GG+L I +
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPNI 60
+E+L IG+G++G + +R K G++ K + G + Q E+ R LKHPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 61 IRFKEVFL--TPTELAIVMEYAAGGEL 85
+R+ + + T T L IVMEY GG+L
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDL 94
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 111
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 107
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 115
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
IG G++G K+ K + A K I + + +D Q EI ++L HPNIIR E F
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ-EIEIMKSLDHPNIIRLYETF 92
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
T++ +VME GGELFER+ + F E + ++
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEHVQREIMNHRALKHPNIIRFKEVF 67
+G+G F L DK + +L A+K I + + + ++ EI +KHPNI+ +++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
+ L ++M+ +GGELF+RI G ++E + L+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEHVQREIMNHRALKHPNIIRFKEVF 67
+G+G F L DK + +L A+K I + + + ++ EI +KHPNI+ +++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLL 105
+ L ++M+ +GGELF+RI G ++E + L+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT 110
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
IG G++G K+ K + A K I + + +D Q EI ++L HPNIIR E F
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ-EIEIMKSLDHPNIIRLYETF 75
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
T++ +VME GGELFER+ + F E + ++
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 112
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 124
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEHVQREIMNHRALKHPNIIRFKEVF 67
+G+G F L DK + +L A+K I + + + ++ EI +KHPNI+ +++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLL 105
+ L ++M+ +GGELF+RI G ++E + L+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRG--QKIDEHVQREIMNHRALKHPNIIRFKEVF 67
+G+G F L DK + +L A+K I + + + ++ EI +KHPNI+ +++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLL 105
+ L ++M+ +GGELF+RI G ++E + L+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 133
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K S + A+K + + Q ++ ++RE+ L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 133
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ--------------KIDEHVQREIMNH 52
++ +GSG +G L ++K A+K I++ Q K E + EI
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++L HPNII+ +VF +V E+ GGELFE+I N +F E
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ F+I + +G G FG L R++ S + A+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + RF E
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ F+I + +G G FG L R++ S + A+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + RF E
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 2 DRFEIL--KDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREI-MNHRAL 55
+ F IL K++G G F V + K +G+ YA K+++ RGQ + EI + A
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERIC---NAGRFSEDEVHALLLS-----Y 107
P +I EV+ +E+ +++EYAAGGE+F +C A SE++V L+ Y
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIF-SLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 108 YFH 110
Y H
Sbjct: 146 YLH 148
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL----KHP 58
F L +G G+FG L K + ELYAVK +++ I D+ V+ ++ R L K P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
+ + F T L VMEY GG+L I GRF E
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE 120
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 12/107 (11%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSG----ELYAVKYIQRG-----QKIDEHVQREIMNHR 53
+FE+LK +G G+FG LV+ K SG +LYA+K +++ ++ ++R+I+
Sbjct: 26 QFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 83
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
+ HP I++ F T +L +++++ GG+LF R+ F+E++V
Sbjct: 84 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 12/107 (11%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSG----ELYAVKYIQRG-----QKIDEHVQREIMNHR 53
+FE+LK +G G+FG LV+ K SG +LYA+K +++ ++ ++R+I+
Sbjct: 25 QFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
+ HP I++ F T +L +++++ GG+LF R+ F+E++V
Sbjct: 83 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ----KIDEHVQREIMNHRALK 56
++ FEI + +G G FG L R+K + A+K + + Q ++ ++RE+ L+
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
HPNI+R F T + +++EYA G ++ + +F E
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 107
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 12/107 (11%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSG----ELYAVKYIQRG-----QKIDEHVQREIMNHR 53
+FE+LK +G G+FG LV+ K SG +LYA+K +++ ++ ++R+I+
Sbjct: 25 QFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
+ HP I++ F T +L +++++ GG+LF R+ F+E++V
Sbjct: 83 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL----KHP 58
F L +G G+FG L K + ELYAVK +++ I D+ V+ ++ R L K P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
+ + F T L VMEY GG+L I GRF E
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE 441
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL----KHP 58
F L +G G+FG L K + ELYA+K +++ I D+ V+ ++ R L K P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
+ + F T L VMEY GG+L I G+F E +
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ 121
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHR-----ALKHP 58
F LK IG G+FG L R K YAVK +Q+ + + ++ IM+ R +KHP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELF 86
++ F T +L V++Y GGELF
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELF 127
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR----GQKIDEHVQREIMNHRALKHPN 59
I + IG+G+FG R +W G AVK + ++++E + RE+ + L+HPN
Sbjct: 39 LNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPN 95
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAG-RFSEDEVHALLLSY 107
I+ F P L+IV EY + G L+ + +G R DE L ++Y
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNI 60
+ +LK++GSG FGV KL KW G+ AVK I+ G ++ +E L HP +
Sbjct: 8 EEITLLKELGSGQFGVVKL--GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKL 65
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGR 94
++F V + IV EY + G L + + G+
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK 99
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR----GQKIDEHVQREIMNHRALKHPN 59
I + IG+G+FG R +W G AVK + ++++E + RE+ + L+HPN
Sbjct: 39 LNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPN 95
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAG-RFSEDEVHALLLSY 107
I+ F P L+IV EY + G L+ + +G R DE L ++Y
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHR-------ALKHPNIIR 62
IG G FG K+ R W G+ AVK + DE + + I N R LKHPNII
Sbjct: 15 IGIGGFG--KVYRAFWIGDEVAVKAARHDP--DEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 63 FKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
+ V L L +VME+A GG L R+ + R D
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPD 105
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 255
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
D + + + IG G++ K K + YAVK I + ++ D + EI+ R +HPNII
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR-DPSEEIEIL-LRYGQHPNII 84
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
K+V+ + +V E GGEL ++I FSE E +L
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 178
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF 85
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIIRFKEVFLTPTELAIVMEYAA 81
PNI++ +V T +L +V E+ +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLS 86
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF 84
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEYAA 81
PNI++ +V T +L +V E+ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF 90
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIIRFKEVFLTPTELAIVMEYAA 81
PNI++ +V T +L +V E+ +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLS 87
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF 84
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEYAA 81
PNI++ +V T +L +V E+ +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF 85
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF 82
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF 86
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +++G G F V + +G+ YA K I + + + ++RE R LKHP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + +V + GGELFE I +SE D H +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF 84
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF 86
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF 87
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF 82
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF 90
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF 87
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF 84
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF 86
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF 85
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRALKHPNI 60
++ +K +GSG +G L RDK + A+K I++ + + E+ + L HPNI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ + F +VME GGELF+ I + +F+E
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE 135
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF 82
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +++G G F V + +G+ YA K I + + + ++RE R LKHP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + +V + GGELFE I +SE D H +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRD---KWSGELYAVKYIQ-----RGQKIDEHVQREIMNHRAL 55
FE+L+ +G G +G VR +G+++A+K ++ R K H + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
KHP I+ F T +L +++EY +GGELF ++ G F ED
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 106
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRD---KWSGELYAVKYIQ-----RGQKIDEHVQREIMNHRAL 55
FE+L+ +G G +G VR +G+++A+K ++ R K H + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
KHP I+ F T +L +++EY +GGELF ++ G F ED
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 122
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEH 82
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEH 86
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 130
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
+++ I +D+G G FG+ + S + Y K+++ V++EI +H NI+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDE 99
E F + EL ++ E+ +G ++FERI N F +E
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNE 101
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
Length = 271
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +++G G F V + K + YA K I + + + ++RE R LKHP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + +V + GGELFE I +SE D H +
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 136
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 124
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 128
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human
Chk1 Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human
Chk1 Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 94
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V K SG + A K I K I + RE+ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
I+ F F + E++I ME+ GG L + + AGR E
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 165
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle
Checkpoint Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As
Potent Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 133
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With
Inhibitor 38
Length = 322
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK---IDEHVQREIMNHRALKH 57
M+++E + IG G++GV R++ +G++ A+K + I + REI + LKH
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
PN++ EVF L +V EY L E
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHE 91
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + + SG+L AVK + R Q+ E + E++ R +H N++ +L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ A+ L+
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA 135
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNII 61
D + + + IG G++ K K + YAVK I + ++ D + EI+ R +HPNII
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR-DPSEEIEIL-LRYGQHPNII 84
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
K+V+ + +V E GGEL ++I FSE E +L
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHPNI 60
+++ +++G G F V + +G+ YA K I + + + ++RE R LKHPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 61 IRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
+R + ++ + GGELFE I +SE D H +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI 127
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
RFE IG G G D +G+ A++ + + Q E + EI+ R K+PNI+
Sbjct: 25 RFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERI 89
+ + +L EL +VMEY AGG L + +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVV 109
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
RFE IG G G D +G+ A++ + + Q E + EI+ R K+PNI+
Sbjct: 25 RFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERI 89
+ + +L EL +VMEY AGG L + +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVV 109
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
RFE IG G G D +G+ A++ + + Q E + EI+ R K+PNI+
Sbjct: 24 RFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERI 89
+ + +L EL +VMEY AGG L + +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
RFE IG G G D +G+ A++ + + Q E + EI+ R K+PNI+
Sbjct: 24 RFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERI 89
+ + +L EL +VMEY AGG L + +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
RFE IG G G D +G+ A++ + + Q E + EI+ R K+PNI+
Sbjct: 24 RFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERI 89
+ + +L EL +VMEY AGG L + +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALKH 57
D FEIL+ IG G+FG +V+ + ++YA+KY+ + + ++ +V +E+ + L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
P ++ F ++ +V++ GG+L + F E+ V
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV 117
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ L R+K SG AVK + R Q+ E + E++ R +H N++ + +L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
EL ++ME+ GG L + I + R +E+++
Sbjct: 113 VGEELWVLMEFLQGGALTD-IVSQVRLNEEQI 143
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +DIG G F V + +G YA K I + + + ++RE R LKH
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + +V + GGELFE I +SE D H +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+ I+ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF 83
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M+ F+ ++ IG G +GV R+K +GE+ A+ I+ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI++ +V T +L +V E+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF 82
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNI 60
MDRF++ + G G FG +L ++K +G A+K + + + + + + L HPNI
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 61 IRFKEVFLTPTE-------LAIVMEYAAGGELFERIC 90
++ + F T E L +VMEY + R C
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCC 116
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKHP 58
+ F+ ++ IG G +GV R+K +GE+ A+K I+ + + REI + L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 59 NIIRFKEVFLTPTELAIVMEY 79
NI++ +V T +L +V E+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQ---REIMNHRALKHPN 59
F L++IG G+FG RD + E+ A+K + G++ +E Q +E+ + L+HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 60 IIRFKEVFLTPTELAIVMEYAAGG 83
I+++ +L +VMEY G
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGS 100
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G +G +L ++ + E AVK + + +D E++++EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQ---REIMNHRALKHPN 59
F L++IG G+FG RD + E+ A+K + G++ +E Q +E+ + L+HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 60 IIRFKEVFLTPTELAIVMEYAAGG 83
I+++ +L +VMEY G
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGS 139
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPN 59
D FE + ++G+GN GV V+ + SG + A K I K I + RE+ P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
I+ F F + E++I ME+ GG L + + A R E+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE 114
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +++G G F V + K +G +A K I + + + ++RE R L+HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + + +V + GGELFE I +SE D H +
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALKH 57
D +++ +++G G F V + K +G +A K I +K+ + ++RE R L+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQH 64
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
PNI+R + + +V + GGELFE I +SE D H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
D +++ +++G G F V + K +G +A K I + + + ++RE R L+HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + + +V + GGELFE I +SE D H +
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 110
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
F++L+ +G G++G K +G++ A+K + + E + +EI + P+++++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII-KEISIMQQCDSPHVVKY 89
Query: 64 KEVFLTPTELAIVMEYAAGGELFERI-CNAGRFSEDEVHALLLSY-----YFHY 111
+ T+L IVMEY G + + I +EDE+ +L S Y H+
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID----EHVQREIMNHRALKH 57
D +++ +++G G F V + K +G +A K I +K+ + ++RE R L+H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQH 87
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
PNI+R + + +V + GGELFE I +SE D H +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID--EHVQREIMNHRALKHP 58
++ +++++ +G G G +L ++ + E AVK + + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
N+++F + +EY +GGELF+RI
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
IG G+ G+ + +K +G+ AVK + R Q+ E + E++ R H N++ +L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 69 TPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
EL +VME+ GG L + I R +E+++ + LS
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLS 149
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQ---KIDEHVQREIMNHRALKHP 58
+ +++ +++G G F V + +G+ YA I + + + ++RE R LKHP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE-DEVHAL 103
NI+R + ++ + GGELFE I +SE D H +
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI 116
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQ------KIDEHVQREIMNHRALKHPNIIRF 63
IG G++GV ++ + + + A+K + + + K E ++ E+ + L HPNI R
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 64 KEVFLTPTELAIVMEYAAGGELFERI 89
EV+ + +VME GG L +++
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKL 119
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV-----HALLLSY 107
+ L HP II+ K F + IV+E GGELF+++ R E LL
Sbjct: 70 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 108 YFH 110
Y H
Sbjct: 129 YLH 131
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV-----HALLLSY 107
+ L HP II+ K F + IV+E GGELF+++ R E LL
Sbjct: 70 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 108 YFH 110
Y H
Sbjct: 129 YLH 131
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A+K I + ++ D +V+ EI
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV-----HALLLSY 107
+ L HP II+ K F + IV+E GGELF+++ R E LL
Sbjct: 69 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 108 YFH 110
Y H
Sbjct: 128 YLH 130
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV-----HALLLSY 107
+ L HP II+ K F + IV+E GGELF+++ R E LL
Sbjct: 70 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 108 YFH 110
Y H
Sbjct: 129 YLH 131
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A+K I + ++ D +V+ EI
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV-----HALLLSY 107
+ L HP II+ K F + IV+E GGELF+++ R E LL
Sbjct: 76 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 108 YFH 110
Y H
Sbjct: 135 YLH 137
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQR----EIMNHRALKHPNIIRFKE 65
+G G FG A V + +GE+ +K + R DE QR E+ R L+HPN+++F
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + EY GG L
Sbjct: 75 VLYKDKRLNFITEYIKGGTL 94
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 72
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 76
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 87
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 74
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 72
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 69
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 87
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 75
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 70
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 73
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 69
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 100
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 69
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH------VQREIMNHRALKH 57
+E++K IG G FG +LVR K + ++YA+K + + + I +R+IM
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NS 128
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
P +++ F L +VMEY GG+L + N
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 162
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQ 68
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH------VQREIMNHRALKH 57
+E++K IG G FG +LVR K + ++YA+K + + + I +R+IM
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NS 133
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
P +++ F L +VMEY GG+L + N
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 167
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQ 67
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGEL 85
H NI+++K V + L ++MEY G L
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH------VQREIMNHRALKH 57
+E++K IG G FG +LVR K + ++YA+K + + + I +R+IM
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NS 133
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
P +++ F L +VMEY GG+L + N
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 167
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID-EHVQREIMNHRALKHPNIIRFKE 65
++ +G G F LV G YA+K I ++ D E QRE HR HPNI+R
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 66 VFL----TPTELAIVMEYAAGGELF---ERICNAGRF-SEDEVHALLL 105
L E +++ + G L+ ER+ + G F +ED++ LLL
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL 141
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 4 FEILKDIGSGNFGVAKLVR----DKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALK 56
+ L+ +G GNFG ++ R +GE+ AVK +Q +EH+ +REI ++L+
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQ 72
Query: 57 HPNIIRFKEVFLTP--TELAIVMEYAAGGELFE 87
H NI+++K V + L ++ME+ G L E
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLRE 105
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A++ I + ++ D +V+ EI
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
+ L HP II+ K F + IV+E GGELF+++ R E
Sbjct: 209 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 252
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHP 58
++ EI + IG G FG ++ +W GE+ A++ I + ++ ++ RE+M +R +H
Sbjct: 33 EQLEIGELIGKGRFG--QVYHGRWHGEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERICNA 92
N++ F ++P LAI+ G L+ + +A
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA 123
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-------GQKIDE--HVQREIMNH 52
D + + K +GSG G KL ++ + + A++ I + ++ D +V+ EI
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
+ L HP II+ K F + IV+E GGELF+++ R E
Sbjct: 195 KKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---- 55
++ FE+ K +G G+FG L K + + +A+K +++ + D+ V+ ++ R L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFS 96
+HP + F T L VMEY GG+L I + +F
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD 117
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-----GQKIDEHVQREIMNHRALKHP 58
F++L+ IG G++ LVR K + +YA+K +++ + ID + + +A HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
++ F T + L V+EY GG+L
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL 108
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-----GQKIDEHVQREIMNHRALKHP 58
F++L+ IG G++ LVR K + +YA+K +++ + ID + + +A HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
++ F T + L V+EY GG+L
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDL 93
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-----GQKIDEHVQREIMNHRALKHP 58
F++L+ IG G++ LVR K + +YA+K +++ + ID + + +A HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
++ F T + L V+EY GG+L
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDL 97
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV------QREIMNHRALKH 57
++++K IG G FG +LVR K S ++YA+K + + + I +R+IM
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NS 134
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
P +++ F L +VMEY GG+L + N
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN 168
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALK 56
M ++E L+ IG G +G +++ + E+ A+K + R DE V REI + LK
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 57 HPNIIRFKEVFLTPTELAIVMEYA 80
H NI+R +V + +L +V E+
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC 83
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By
5z-7-oxozeaenol
Length = 315
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
E+ + +G G FGV + + KW + A+K I+ + + E+ + HPNI++
Sbjct: 11 IEVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIV-ELRQLSRVNHPNIVKL 67
Query: 64 KEVFLTPTELAIVMEYAAGGELF 86
L P + +VMEYA GG L+
Sbjct: 68 YGACLNP--VCLVMEYAEGGSLY 88
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALK 56
M ++E L+ IG G +G +++ + E+ A+K + R DE V REI + LK
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 57 HPNIIRFKEVFLTPTELAIVMEYA 80
H NI+R +V + +L +V E+
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC 83
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK------IDEHVQREIMNHRALK 56
R+E L +G G F RDK + ++ A+K I+ G + I+ REI + L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 57 HPNIIRFKEVFLTPTELAIVMEY 79
HPNII + F + +++V ++
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDF 93
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
E+ + +G G FGV + + KW + A+K I+ + + E+ + HPNI++
Sbjct: 10 IEVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIV-ELRQLSRVNHPNIVKL 66
Query: 64 KEVFLTPTELAIVMEYAAGGELF 86
L P + +VMEYA GG L+
Sbjct: 67 YGACLNP--VCLVMEYAEGGSLY 87
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4 FEILKDIGSG--NFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALKHP 58
+E+L IG G + L R K +GE V+ I +E V Q E+ + HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERIC 90
NI+ ++ F+ EL +V + A G + IC
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLIC 118
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4 FEILKDIGSG--NFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV---QREIMNHRALKHP 58
+E+L IG G + L R K +GE V+ I +E V Q E+ + HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERIC 90
NI+ ++ F+ EL +V + A G + IC
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLIC 102
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
+ +G GNFG +L R +G L AVK +Q G QREI +AL I+
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 62 RFKEVFLTP--TELAIVMEYAAGGEL 85
+++ V P EL +VMEY G L
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCL 97
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRAL-KHPN 59
F L+ IGSG FG + G +YA+K ++ G +++ RE+ H L +H +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR----FSEDEVHALLL 105
++R+ + + I EY GG L + I R F E E+ LLL
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRAL-KHPN 59
F L+ IGSG FG + G +YA+K ++ G +++ RE+ H L +H +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR----FSEDEVHALLL 105
++R+ + + I EY GG L + I R F E E+ LLL
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRAL-KHPN 59
F L+ IGSG FG + G +YA+K ++ G +++ RE+ H L +H +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR----FSEDEVHALLL 105
++R+ + + I EY GG L + I R F E E+ LLL
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + +G+ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + +G+ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRAL-KHPN 59
F L+ IGSG FG + G +YA+K ++ G +++ RE+ H L +H +
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 68
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR----FSEDEVHALLL 105
++R+ + + I EY GG L + I R F E E+ LLL
Sbjct: 69 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 118
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + +G+ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALK 56
M+++ L+ IG G +GV ++ + GE +A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIIRFKEVFLTPTELAIVMEY 79
H NI++ +V T L +V E+
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID------EHVQREIMNHRAL 55
D +E+ + IG G F V + ++ +G+ +AVK + + E ++RE L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
KHP+I+ E + + L +V E+ G +L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL 113
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALK 56
M+++ L+ IG G +GV ++ + GE +A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIIRFKEVFLTPTELAIVMEY 79
H NI++ +V T L +V E+
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALK 56
M+++ L+ IG G +GV ++ + GE +A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIIRFKEVFLTPTELAIVMEY 79
H NI++ +V T L +V E+
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR-----GQKIDEHVQREIMNHRALKHP 58
F++L+ IG G++ LVR K + +YA++ +++ + ID + + +A HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
++ F T + L V+EY GG+L
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDL 140
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID------EHVQREIMNHRAL 55
D +E+ + IG G F V + ++ +G+ +AVK + + E ++RE L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
KHP+I+ E + + L +V E+ G +L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADL 115
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID------EHVQREIMNHRAL 55
D +E+ + IG G F V + ++ +G+ +AVK + + E ++RE L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
KHP+I+ E + + L +V E+ G +L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL 113
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
D +EI++ IG+G +GV R + +G+ A+K I + + +R + + L KH
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 59 NIIRFKEVFLTPT 71
NII K++ L PT
Sbjct: 114 NIIAIKDI-LRPT 125
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
D +EI++ IG+G +GV R + +G+ A+K I + + +R + + L KH
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 59 NIIRFKEVFLTPT 71
NII K++ L PT
Sbjct: 115 NIIAIKDI-LRPT 126
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNI 60
D +EI+ ++G G FG ++K + L A K I + ++ E EI + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + F L I++E+ AGG
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGG 119
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNI 60
D +EI+ ++G G FG ++K + L A K I + ++ E EI + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + F L I++E+ AGG
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGG 119
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 10 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 66
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 67 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 101
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNI 60
D +EI+ ++G G FG ++K + L A K I + ++ E EI + HPNI
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + F L I++E+ AGG
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGG 119
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL----- 55
M+ F + + IG G FG R +G++YA+K + + + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
P I+ F TP +L+ +++ GG+L + G FSE ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 DRFEILKDIGSGNFGV---AKLVRDKWSGELYAVKYIQRGQKIDE--------HVQREIM 50
+ E K IG G FG+ +LV+DK + A+K + G E QRE+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 51 NHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
L HPNI++ + P + VME+ G+L+ R+ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD 114
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL----- 55
M+ F + + IG G FG R +G++YA+K + + + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
P I+ F TP +L+ +++ GG+L + G FSE ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 10 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 66
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 67 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 101
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 14 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 70
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 71 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 105
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 DRFEILKDIGSGNFGV---AKLVRDKWSGELYAVKYIQRGQKIDE--------HVQREIM 50
+ E K IG G FG+ +LV+DK + A+K + G E QRE+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 51 NHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
L HPNI++ + P + VME+ G+L+ R+ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD 114
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 10 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 66
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 67 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 101
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 DRFEILKDIGSGNFGV---AKLVRDKWSGELYAVKYIQRGQKIDE--------HVQREIM 50
+ E K IG G FG+ +LV+DK + A+K + G E QRE+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 51 NHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICN 91
L HPNI++ + P + VME+ G+L+ R+ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLD 114
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL----- 55
M+ F + + IG G FG R +G++YA+K + + + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
P I+ F TP +L+ +++ GG+L + G FSE ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 294
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL----- 55
M+ F + + IG G FG R +G++YA+K + + + + + +N R +
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 56 --KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
P I+ F TP +L+ +++ GG+L + G FSE ++
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM 293
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 20 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 76
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 77 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 111
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 20 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 76
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 77 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 111
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 113
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHPN 59
D +E+ + IGSG V + E A+K I ++ Q + + +EI HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERI 89
I+ + F+ EL +VM+ +GG + + I
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDII 99
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHPN 59
D +E+ + IGSG V + E A+K I ++ Q + + +EI HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERI 89
I+ + F+ EL +VM+ +GG + + I
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDII 104
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 4 FEILKDIGSGNFGVAKLVRDKW---SGELYAV-------KYIQRGQKIDEHVQREIMNHR 53
+L+ +G G+FGV + R +W SG+ +V + + + +D+ + RE+
Sbjct: 14 LRLLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMH 70
Query: 54 ALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+L H N+IR V LTP + +V E A G L +R+
Sbjct: 71 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRL 105
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 106
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 107
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 108
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ----REIMNHRALKHPN 59
F I K IG G F G A+K +Q +D + +EI + L HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+I++ F+ EL IV+E A G+L I
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMI 123
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 109
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 134
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA GEL + I G F E
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 136
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-DEHVQREIMNHRAL---- 55
++ F + K +G G+FG L K + + +A+K +++ + D+ V+ ++ R L
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFS 96
+HP + F T L VMEY GG+L I + +F
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD 116
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVK------YIQRGQKIDEHVQREIMNHRAL 55
D FEILK IG G F +V+ K +G++YA+K ++RG+ +R+++ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAG 93
+ + F F L +VMEY GG+L + G
Sbjct: 121 RWITQLHF--AFQDENYLYLVMEYYVGGDLLTLLSKFG 156
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
+ +G GNFG +L R +G L AVK +Q G QREI +AL I+
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 75
Query: 62 RFKEVFLTP--TELAIVMEYAAGGEL 85
+++ V P L +VMEY G L
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCL 101
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 87
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 88 YSSGEKKDEVYLNLVLDY 105
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 110
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 111 YSSGEKKDEVYLNLVLDY 128
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 120
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 121 YSSGEKKDEVYLNLVLDY 138
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 118
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 119 YSSGEKKDEVYLNLVLDY 136
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 101
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 102 YSSGEKKDEVYLNLVLDY 119
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 116
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 117 YSSGEKKDEVYLNLVLDY 134
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 116
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 117 YSSGEKKDEVYLNLVLDY 134
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 161
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 162 YSSGEKKDEVYLNLVLDY 179
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 90
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 91 YSSGEKKDEVYLNLVLDY 108
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 94
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 95 YSSGEKKDEVYLNLVLDY 112
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 94
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 95 YSSGEKKDEVYLNLVLDY 112
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 86
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 87 YSSGEKKDEVYLNLVLDY 104
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDVVYLNLVLDY 100
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 83
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 84 YSSGEKKDEVYLNLVLDY 101
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 82
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 83 YSSGEKKDEVYLNLVLDY 100
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVF 67
K IG+G+FGV + SGEL A+K + + ++ RE+ R L H NI+R + F
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRLRYFF 95
Query: 68 LTPTE------LAIVMEY 79
+ E L +V++Y
Sbjct: 96 YSSGEKKDEVYLNLVLDY 113
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
+ +G GNFG +L R +G L AVK +Q G QREI +AL I+
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 62 RFKEVFLTP--TELAIVMEYAAGGEL 85
+++ V P L +VMEY G L
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCL 113
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNII 61
+ +G GNFG +L R +G L AVK +Q G QREI +AL I+
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 74
Query: 62 RFKEVFLTP--TELAIVMEYAAGGEL 85
+++ V P L +VMEY G L
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCL 100
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.9 bits (89), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 125
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 126 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 30/128 (23%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKID------------------ 42
++++ + +IG G++GV KL ++ YA+K + + + I
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 43 ---------EHVQREIMNHRALKHPNIIRFKEVFLTPTE--LAIVMEYAAGGELFERICN 91
E V +EI + L HPN+++ EV P E L +V E G + E +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPT 130
Query: 92 AGRFSEDE 99
SED+
Sbjct: 131 LKPLSEDQ 138
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKIDEHVQREIMNHRALKHPNII 61
+E+ + +G+G FG + +GE A+K ++ K E EI + L HPN++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 62 RFKEV-----FLTPTELAIV-MEYAAGGEL------FERIC 90
+EV L P +L ++ MEY GG+L FE C
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 117
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKIDEHVQREIMNHRALKHPNII 61
+E+ + +G+G FG + +GE A+K ++ K E EI + L HPN++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 62 RFKEV-----FLTPTELAIV-MEYAAGGEL------FERIC 90
+EV L P +L ++ MEY GG+L FE C
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 116
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 1 MDRFEILKDI-GSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHP 58
+D +++ + G G G + +K + E +A+K +Q K +RE+ H RA + P
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCP 77
Query: 59 NIIR----FKEVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
+I+R ++ ++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 131
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 79
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 80 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 1 MDRFEILKDI-GSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHP 58
+D +++ + G G G + +K + E +A+K +Q K +RE+ H RA + P
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCP 75
Query: 59 NIIR----FKEVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
+I+R ++ ++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 129
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 131
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 132 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 175
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 86
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 87 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 130
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 1 MDRFEILKDI-GSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHP 58
+D +++ + G G G + +K + E +A+K +Q K +RE+ H RA + P
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCP 69
Query: 59 NIIR----FKEVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
+I+R ++ ++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 1 MDRFEILKDI-GSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHP 58
+D +++ + G G G + +K + E +A+K +Q K +RE+ H RA + P
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCP 85
Query: 59 NIIR----FKEVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
+I+R ++ ++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 139
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 80
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDEVHALLLS 106
++ L IVME GGELF RI + G F+E E ++ S
Sbjct: 81 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 124
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 9 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 67 VCTKQRPIFIITEYMANGCLL 87
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 20 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 78 VCTKQRPIFIITEYMANGCLL 98
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 13 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 71 VCTKQRPIFIITEYMANGCLL 91
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 14 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 72 VCTKQRPIFIITEYMANGCLL 92
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant
V555r In Complex With Dasatinib
Length = 265
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 14 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 72 VCTKQRPIFIITEYMANGCLL 92
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 29 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 87 VCTKQRPIFIITEYMANGCLL 107
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYI-QRGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
+G G +G+ RD + A+K I +R + + + EI H+ LKH NI+++ F
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 69 TPTELAIVMEYAAGGEL 85
+ I ME GG L
Sbjct: 76 ENGFIKIFMEQVPGGSL 92
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGEL-YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
LK++G+G FGV K KW G+ A+K I+ G ++ E L H +++
Sbjct: 29 LKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 66 VFLTPTELAIVMEYAAGGELF 86
V + I+ EY A G L
Sbjct: 87 VCTKQRPIFIITEYMANGCLL 107
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M++++ L+ +G G +GV +D G + A+K I+ + I REI + L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI+ +V + L +V E+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF 100
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
M++++ L+ +G G +GV +D G + A+K I+ + I REI + L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 58 PNIIRFKEVFLTPTELAIVMEY 79
PNI+ +V + L +V E+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF 100
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNII 61
FE ++ +G G FGV ++K YA+K I+ + E V RE+ L+HP I+
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 62 RFKEVFL-TPTE 72
R+ +L TP E
Sbjct: 68 RYFNAWLETPPE 79
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYI-QRGQKIDEHVQREIMNHRALKHPNIIRFKEVFL 68
+G G +G+ RD + A+K I +R + + + EI H+ LKH NI+++ F
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 69 TPTELAIVMEYAAGGEL 85
+ I ME GG L
Sbjct: 90 ENGFIKIFMEQVPGGSL 106
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L IG G+FG D + E+ A+K I + E +Q+EI P I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
R+ +L T+L I+MEY GG + + G E + +L
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATIL 122
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE----HVQREIMNHRALKHPN 59
F+ K +G G+F L R+ + YA+K +++ I E +V RE L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSE 97
++ F +L + YA G L + I G F E
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI----------QRGQKIDEHVQREIMN 51
+ +E + +G G V + K + + YAVK I + Q++ E +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 52 HRALK-HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
R + HPNII+ K+ + T T +V + GELF+ + SE E ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI----------QRGQKIDEHVQREIMN 51
+ +E + +G G V + K + + YAVK I + Q++ E +E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 52 HRALK-HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
R + HPNII+ K+ + T T +V + GELF+ + SE E ++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI----------QRGQKIDEHVQREIMN 51
+ +E + +G G V + K + + YAVK I + Q++ E +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 52 HRALK-HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
R + HPNII+ K+ + T T +V + GELF+ + SE E ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D SG AVK + R + H +R R L KH
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF T L ++ + G +L I + ++D V L+
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 160
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L+ IG G+FG D + ++ A+K I + E +Q+EI P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++ +L T+L I+MEY GG + + G E ++ +L
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATIL 130
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L+ IG G+FG D + ++ A+K I + E +Q+EI P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++ +L T+L I+MEY GG + + G E ++ +L
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATIL 110
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L+ IG G+FG D + ++ A+K I + E +Q+EI P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++ +L T+L I+MEY GG + + G E ++ +L
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATIL 110
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNII 61
FE ++ +G G FGV ++K YA+K I+ + E V RE+ L+HP I+
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 62 RFKEVFL 68
R+ +L
Sbjct: 67 RYFNAWL 73
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L+ IG G+FG D + ++ A+K I + E +Q+EI P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++ +L T+L I+MEY GG + + G E ++ +L
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATIL 125
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQK-IDEHVQREIMNHR---ALK 56
R+E + +IG G +G RD SG A+K ++ G++ + RE+ R A +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 57 HPNIIRFKEVFLT 69
HPN++R +V T
Sbjct: 65 HPNVVRLMDVCAT 77
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQK-IDEHVQREIMNHR---ALK 56
R+E + +IG G +G RD SG A+K ++ G++ + RE+ R A +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 57 HPNIIRFKEVFLT 69
HPN++R +V T
Sbjct: 65 HPNVVRLMDVCAT 77
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQK-IDEHVQREIMNHR---ALK 56
R+E + +IG G +G RD SG A+K ++ G++ + RE+ R A +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 57 HPNIIRFKEVFLT 69
HPN++R +V T
Sbjct: 65 HPNVVRLMDVCAT 77
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI----QRGQKIDEHVQREIMNHRALKH 57
+R++I+ +G G L D A+K I + ++ + +RE+ N L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSED 98
NI+ +V +VMEY G L E I + G S D
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD 111
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
Length = 383
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIR 62
++ + K +G+G+FG+ V D SG+ +A+K + + + + RE+ + L H NII+
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIK 64
Query: 63 FKEVFLT 69
+ F T
Sbjct: 65 LVDYFYT 71
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 10 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFD 91
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 12 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFD 93
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 15 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFD 96
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 9 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFD 90
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 35 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFD 116
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
FE + +G G FG R+ YA+K I+ ++ + E+M +L H ++R+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 ------KEVFLTP-------TELAIVMEYAAGGELFERI 89
+ F+ P + L I MEY G L++ I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF---- 63
+ IG G FG ++ R KW GE AVK ++ + EI L+H NI+ F
Sbjct: 48 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 64 KEVFLTPTELAIVMEYAAGGELFE 87
+ T T+L +V +Y G LF+
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFD 129
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHR--------- 53
R+E + +IG G +G RD SG A+K ++ I R
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 54 ALKHPNIIRFKEVFLT 69
A +HPN++R +V T
Sbjct: 70 AFEHPNVVRLMDVCAT 85
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCAKLTDDHVQFLI 127
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.7 bits (78), Expect = 0.012, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-RALKHPNIIR----FK 64
+G G G + +K + E +A+K +Q K +RE+ H RA + P+I+R ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 125
Query: 65 EVFLTPTELAIVMEYAAGGELFERICNAG--RFSEDE 99
++ L IV E GGELF RI + G F+E E
Sbjct: 126 NLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTERE 162
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIR 62
+ +L+ +G G +G ++ R W GE AVK + + E+ N L+H NI+
Sbjct: 38 QITLLECVGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG 95
Query: 63 FKEVFLT----PTELAIVMEYAAGGELFE 87
F +T T+L ++ Y G L++
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYD 124
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ-RGQKIDEHVQREIMNHRALKHPNI 60
D +EI+ ++G +FG ++K + L A K I + ++ E EI + HPNI
Sbjct: 12 DFWEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + F L I++E+ AGG
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGG 92
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIR 62
+ +L+ +G G +G ++ R W GE AVK + + E+ N L+H NI+
Sbjct: 9 QITLLECVGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG 66
Query: 63 FKEVFLT----PTELAIVMEYAAGGELFE 87
F +T T+L ++ Y G L++
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYD 95
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D G AVK + R + H + RE++ + + H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 81 KNIISLLNVF-TP 92
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D G AVK + R + H + RE++ + + H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
M+++E L +G G++G+ R+K +G + A+K + + + REI + L+H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 58 PNIIRFKEVFLTPTELAIVMEYA 80
N++ EV +V E+
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFV 106
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 30 YAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
YA+K I+ G I REI R LKHPN+I ++VFL+
Sbjct: 51 YALKQIE-GTGISMSACREIALLRELKHPNVISLQKVFLS 89
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK------YIQRGQKIDEHVQREIMNHRALKH 57
FEILK IG G FG +V+ K + +++A+K ++R + +R+++ + K
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELF 86
+ + F L +VM+Y GG+L
Sbjct: 136 ITTLHY--AFQDDNNLYLVMDYYVGGDLL 162
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHPNI 60
+EI+ ++G G FG ++K +G L A K I+ K +E ++ I+ L HP I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYI 78
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + +L I++E+ GG
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGG 101
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 127
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHPNI 60
+EI+ ++G G FG ++K +G L A K I+ K +E ++ I+ L HP I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYI 70
Query: 61 IRFKEVFLTPTELAIVMEYAAGG 83
++ + +L I++E+ GG
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGG 93
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A
2- Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A
2- Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+L+ +G G +G ++ R W GE AVK + + E+ N L+H NI+ F
Sbjct: 12 LLECVGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 66 VFLT----PTELAIVMEYAAGGELFE 87
+T T+L ++ Y G L++
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYD 95
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 127
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDE---------HVQREIMNHR 53
++ + +GSG FG DK + VK+I++ + +++ V EI
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 54 ALKHPNIIRFKEVFLTPTELAIVME-YAAGGELFERICNAGRFSEDEVHALLLSYYF 109
++H NII+ ++F +VME + +G +LF I R E L SY F
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP-----LASYIF 136
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALK---HPNIIRFK 64
+ IG GNFG R + L AVK + D + + R LK HPNI+R
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLI 178
Query: 65 EVFLTPTELAIVMEYAAGGELF 86
V + IVME GG+
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFL 200
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 151
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 10 IGSGNFGVAKLVRDKWSGE---LYAVKYIQRGQKIDEHVQREIMNHRAL----KHPNIIR 62
IG+G FG R K G+ A+K ++ G E +RE ++ ++ +HPNIIR
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT--ERQRREFLSEASIMGQFEHPNIIR 79
Query: 63 FKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
+ V + I+ E+ G L F R+ N G+F+ ++ +L
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGML 122
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALK---HPNIIRFK 64
+ IG GNFG R + L AVK + D + + R LK HPNI+R
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLI 178
Query: 65 EVFLTPTELAIVMEYAAGGELF 86
V + IVME GG+
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFL 200
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 1 MDRFEILKD-------IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH 52
MD++E+ + +G G +G V V K+S + AVK ++ E +E
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVM 82
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
+ +KHPN+++ V IV EY G L + R CN +EV A++L Y
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN-----REEVTAVVLLY 134
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK----IDEHVQREIMNHRALK 56
++ F++ +G G+F +G A+K I + + + VQ E+ H LK
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFERICNAGR-FSEDEV 100
HP+I+ F + +V+E GE+ + N + FSE+E
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEA 114
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHP 58
+R++ L +GSG +G D +G AVK + R + H + RE+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 137
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 150
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 151
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 10 IGSGNFGVAKLVRDKWSGE---LYAVKYIQRGQKIDEHVQREIMNHRAL----KHPNIIR 62
IG+G FG R K G+ A+K ++ G E +RE ++ ++ +HPNIIR
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT--ERQRREFLSEASIMGQFEHPNIIR 81
Query: 63 FKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
+ V + I+ E+ G L F R+ N G+F+ ++ +L
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGML 124
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRAL-KHPN 59
F+ L +G G++G VR K G LYAVK RG K E+ +H + +HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 60 IIRFKEVF 67
+R ++ +
Sbjct: 119 CVRLEQAW 126
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHPNI 60
++D+G G+FG +L R +GE AVK + + G +++EI R L H NI
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 61 IRFKEVFLTP--TELAIVMEYAAGGELFE 87
+++K + + ++ME+ G L E
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKE 102
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNI 60
+F+ L+ +G+G + +K +G A+K ++ + REI + LKH NI
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 61 IRFKEVFLTPTELAIVMEY 79
+R +V T +L +V E+
Sbjct: 66 VRLYDVIHTENKLTLVFEF 84
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWS-GELYAVKYI--QRGQKIDEHVQREIMNHRALKHP 58
D F +G G FG K+ + + + G L AVK + +R Q + Q E+ H
Sbjct: 38 DNFSNKNILGRGGFG--KVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
N++R + +TPTE +V Y A G +
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSV 122
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 7 LKDIGSGNFGVAKLVR----DKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHPNI 60
++D+G G+FG +L R +GE AVK + + G +++EI R L H NI
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 61 IRFKEVFLTP--TELAIVMEYAAGGELFE 87
+++K + + ++ME+ G L E
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKE 114
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L IGSG +G D +G AVK + R + H +R R L KH
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 136
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWS-GELYAVKYI--QRGQKIDEHVQREIMNHRALKHP 58
D F +G G FG K+ + + + G L AVK + +R Q + Q E+ H
Sbjct: 30 DNFXNKNILGRGGFG--KVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
N++R + +TPTE +V Y A G +
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSV 114
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 141
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G +E E L HP +++
Sbjct: 10 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 68 VCLEQAPICLVFEFMEHGCL 87
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G +E E L HP +++
Sbjct: 12 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 70 VCLEQAPICLVFEFMEHGCL 89
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIR 62
+ +++K IG G +G ++ KW GE AVK ++ + EI ++H NI+
Sbjct: 38 QIQMVKQIGKGRYG--EVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG 95
Query: 63 FKEVFL----TPTELAIVMEYAAGGELFE 87
F + + T+L ++ +Y G L++
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYD 124
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 10 IGSGNFGVA------KLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
IG G+FGV +++ + ++ I Q+++ + RE + R L HPN++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL-REGLLMRGLNHPNVLAL 87
Query: 64 KEVFLTPTELA-IVMEYAAGGELFERICNAGR 94
+ L P L +++ Y G+L + I + R
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR 119
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G +E E L HP +++
Sbjct: 13 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 71 VCLEQAPICLVTEFMEHGCL 90
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK------YIQRGQKIDEHVQREIMNHRALKH 57
FEI+K IG G FG +V+ K + +YA+K ++R + +R+++ + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELF 86
+ + F L +VM+Y GG+L
Sbjct: 152 ITALHY--AFQDENHLYLVMDYYVGGDLL 178
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK------YIQRGQKIDEHVQREIMNHRALKH 57
FEI+K IG G FG +V+ K + +YA+K ++R + +R+++ + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELF 86
+ + F L +VM+Y GG+L
Sbjct: 136 ITALHY--AFQDENHLYLVMDYYVGGDLL 162
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G +E E L HP +++
Sbjct: 15 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 73 VCLEQAPICLVFEFMEHGCL 92
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKSQKLTDDHVQFLI 131
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 128
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 129
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 127
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 128
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G +E E L HP +++
Sbjct: 12 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 70 VCLEQAPICLVFEFMEHGCL 89
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI-MNHRALKHPNIIR 62
FE+++ +G+G +G R +G+L A+K + +E +++EI M + H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 63 FKEVFLTPT------ELAIVMEYAAGGELFERICNA 92
+ F+ +L +VME+ G + + I N
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNII 61
F L+ IG G+FG D + ++ A+K I + E +Q+EI +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 62 RFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALL 104
++ +L ++L I+MEY GG + + AG F E ++ +L
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATML 126
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 136
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 154
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHP 58
+R++ L +GSG +G D +G AVK + R + H + RE+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 137
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKID-EHVQREIMNHRALKHP 58
D +EI IG G++G L DK + + A+K + R ID + + REI LK
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 59 NIIRFKEV-----FLTPTELAIVMEYA 80
IIR ++ L EL IV+E A
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIA 114
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 151
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 143
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 154
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 133
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 143
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 137
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 133
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 133
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 150
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 136
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 130
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 138
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 142
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 138
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 138
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 136
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 137
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRALKHPNIIRFKEV 66
+GSG +G DK SGE A+K + R + + RE++ + ++H N+I +V
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 67 FLTPTEL 73
F + L
Sbjct: 110 FTPASSL 116
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 138
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 133
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 142
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 121 KNIISLLNVF-TP 132
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
+I K IG G FG R K G+ A+K ++ G Q+ D + IM
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FD 67
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
HPNII + V + I+ EY G L F R N GRF+ ++ +L
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGML 116
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 131
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 84 KNIISLLNVF-TP 95
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I++E+ G L + R CN EV+A++L Y
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLY 120
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRALKHPNIIRFKEV 66
+GSG +G DK SGE A+K + R + + RE++ + ++H N+I +V
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 67 FLTPTEL 73
F + L
Sbjct: 92 FTPASSL 98
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
Length = 305
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++ +G G +G ++ R W GE AVK + + EI N L+H NI+ F
Sbjct: 12 LVECVGKGRYG--EVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 66 VFLT----PTELAIVMEYAAGGELFE 87
+T T+L ++ Y G L++
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYD 95
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 77 KNIISLLNVF-TP 88
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based
Assessment Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based
Assessment Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 84 KNIISLLNVF-TP 95
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G FG V + V K+S + AVK ++ E +E + +KH
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 113
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
+I K IG G FG R K G+ A+K ++ G Q+ D + IM
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FD 73
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
HPNII + V + I+ EY G L F R N GRF+ ++ +L
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGML 122
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 82 KNIISLLNVF-TP 93
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 76 KNIISLLNVF-TP 87
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 77 KNIISLLNVF-TP 88
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 7 LKDIGSGNFGVAKLVRDKW-SGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKE 65
+++IGSG FG+ L W + + A+K I+ G ++ E L HP +++
Sbjct: 32 VQEIGSGQFGLVHL--GYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 66 VFLTPTELAIVMEYAAGGEL 85
V L + +V E+ G L
Sbjct: 90 VCLEQAPICLVFEFMEHGCL 109
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
+I K IG G FG R K G+ A+K ++ G Q+ D + IM
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FD 88
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
HPNII + V + I+ EY G L F R N GRF+ ++ +L
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGML 137
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I++E+ G L + R CN EV+A++L Y
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLY 116
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLI 131
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + R + H +R R L KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLI 131
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.3 bits (72), Expect = 0.066, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 58 PNIIRFKEVFLTPTE 72
NII VF TP +
Sbjct: 121 KNIISLLNVF-TPQK 134
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted
Quinoline Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted
Quinoline Inhibitor
Length = 356
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 76 KNIISLLNVF-TP 87
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 115
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 115
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 16/83 (19%)
Query: 8 KDIGSGNFGV---AKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFK 64
K IG+G+FGV AKLV S E+ A+K + + ++ RE+ R +KHPN++ K
Sbjct: 46 KVIGNGSFGVVFQAKLVE---SDEV-AIKKVLQDKRFK---NRELQIMRIVKHPNVVDLK 98
Query: 65 EVFLTPTE------LAIVMEYAA 81
F + + L +V+EY
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVP 121
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 119
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ---RGQKIDEHVQREIMNHRALKH 57
+DR+ + +G G +G D + E A+K I+ + + RE+ + L+H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 58 PNIIRFKEVFLTPTELAIVMEYA 80
NII K V L ++ EYA
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYA 115
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 120
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 128
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I++E+ G L + R CN EV A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEVSAVVLLY 115
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I++E+ G L + R CN EV A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEVSAVVLLY 115
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEIL--KDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 117
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I++E+ G L + R CN EV A++L Y
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEVSAVVLLY 113
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 117
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 120
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 32.0 bits (71), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 117
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 120
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.0 bits (71), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
FE + +G G FG R+ YA+K I+ ++ + E+M +L H ++R+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 ------KEVFLTP-------TELAIVMEYAAGGELFERI 89
+ F+ P + L I MEY L++ I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI 106
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 116
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEIL--KDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 319
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.0 bits (71), Expect = 0.095, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSG-------ELYAVKYIQRGQKIDEHV--QREIMNH 52
+ E ++DIG G FG ++ + + G + AVK ++ D QRE
Sbjct: 47 NNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM 104
Query: 53 RALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
+PNI++ V + ++ EY A G+L E
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 1 MDRFEIL--KDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV+A++L Y
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLY 361
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRAL 55
R I K IGSG+ G R + G+ A+K ++ G Q+ D + IM
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ--F 107
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V IV EY G L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor,
Sr-3737
Length = 364
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIISLLNVF-TP 94
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRAL 55
R I K IGSG+ G R + G+ A+K ++ G Q+ D + IM
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ--F 107
Query: 56 KHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V IV EY G L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 115
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRAL---KHP 58
+R++ L +GSG +G D +G AVK + + + H +R R L KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIIRFKEVFLTPTEL-----AIVMEYAAGGELFERICNAGRFSEDEVHALL 104
N+I +VF L ++ + G +L I + ++D V L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLI 143
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 115
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 120
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 88 KNIIGLLNVF-TPQKSLEEFQDVYIVME 114
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 77 KNIIGLLNVF-TPQKSLEEFQDVYIVME 103
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 84 KNIIGLLNVF-TPQKSLEEFQDVYIVME 110
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEILKD--IGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 113
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVME 109
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 1 MDRFEIL--KDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
M+R +I +G G +G V + V K+S + AVK ++ E +E + +KH
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 58 PNIIRFKEVFLTPTELAIVMEYAAGGELFE--RICNAGRFSEDEVHALLLSY 107
PN+++ V I+ E+ G L + R CN EV A++L Y
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLY 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVME 109
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVME 109
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 85 KNIIGLLNVF-TP 96
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP-------TELAIVME 78
NII VF TP ++ IVME
Sbjct: 83 KNIIGLLNVF-TPQKSLEEFQDVYIVME 109
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In
Map Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ + T IVMEY G L + + G +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 114
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In
Map Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ + T IVMEY G L + + G +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 114
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ + T IVMEY G L + + G +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 114
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In
Map Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In
Map Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In
Map Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKH 57
+ R++ LK IGSG G+ D A+K + R + H + RE++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIIRFKEVFLTP 70
NII VF TP
Sbjct: 83 KNIIGLLNVF-TP 94
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHP 58
M+ + L +G G + + K + L A+K I + + RE+ + LKH
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 59 NIIRFKEVFLTPTELAIVMEY 79
NI+ ++ T L +V EY
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEY 81
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGEL---YAVKYIQRG----QKIDEHVQREIMNHRALKHP 58
I K +G+G FG R K + A+K ++ G Q+ D + IM HP
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FDHP 94
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
NIIR + V + IV EY G L
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSL 121
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGEL---YAVKYIQRG----QKIDEHVQREIMNHRALKHP 58
I K +G+G FG R K + A+K ++ G Q+ D + IM HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FDHP 77
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
NIIR + V + IV EY G L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSL 104
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
+G G+FG + DK +G AVK + +++ E+M L P I+
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 156
Query: 70 PTELAIVMEYAAGGELFERICNAGRFSED 98
+ I ME GG L + + G ED
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPED 185
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
+G G+FG + DK +G AVK + +++ E+M L P I+
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 137
Query: 70 PTELAIVMEYAAGGELFERICNAGRFSED 98
+ I ME GG L + + G ED
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPED 166
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 102
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV EY G L
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI-----MN-HRA 54
MDR+EI IG G+FG D+ E A+K I+ + Q E+ MN H
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 55 LKHPNIIRFKEVFLTPTELAIVME 78
I+ K F+ L +V E
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE 136
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI-----MN-HRA 54
MDR+EI IG G+FG D+ E A+K I+ + Q E+ MN H
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 55 LKHPNIIRFKEVFLTPTELAIVME 78
I+ K F+ L +V E
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE 136
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
+G G+FG ++DK +G AVK + +++ E++ L P I+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 121
Query: 70 PTELAIVMEYAAGGELFERICNAGRFSED 98
+ I ME GG L + I G ED
Sbjct: 122 GPWVNIFMELLEGGSLGQLIKQMGCLPED 150
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
+G G+FG ++DK +G AVK + +++ E++ L P I+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 137
Query: 70 PTELAIVMEYAAGGELFERICNAGRFSED 98
+ I ME GG L + I G ED
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPED 166
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI-----MN-HRA 54
MDR+EI IG G+FG D+ E A+K I+ + Q E+ MN H
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 55 LKHPNIIRFKEVFLTPTELAIVME 78
I+ K F+ L +V E
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFE 117
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN----HRALK 56
++ E L ++GSG G +R + +G + AVK ++R +E+ +R +M+ ++
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN-KRILMDLDVVLKSHD 82
Query: 57 HPNIIRFKEVFLTPTELAIVME 78
P I++ F+T T++ I ME
Sbjct: 83 CPYIVQCFGTFITNTDVFIAME 104
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 10 IGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALKHPNIIR 62
IG+G FG R K G+ A+K ++ G Q+ D + IM HPNII
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIH 87
Query: 63 FKEVFLTPTELAIVMEYAAGGEL 85
+ V + IV EY G L
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSL 110
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 10 IGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALKHPNIIR 62
IG+G FG K G+ A+K ++ G Q+ D + IM HPN+I
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ--FDHPNVIH 72
Query: 63 FKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
+ V T + I+ E+ G L F R N G+F+ ++ +L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGML 115
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 10 IGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALKHPNIIR 62
IG+G FG K G+ A+K ++ G Q+ D + IM HPN+I
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ--FDHPNVIH 98
Query: 63 FKEVFLTPTELAIVMEYAAGGEL--FERICNAGRFSEDEVHALL 104
+ V T + I+ E+ G L F R N G+F+ ++ +L
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGML 141
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV----QREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ + T IVMEY G L + + G +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 131
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNH-----RALKHPNII 61
L +IG G +G + K SG++ AVK I+ +DE Q++++ R+ P I+
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 62 RFKEVFLTPTELAIVME 78
+F + I ME
Sbjct: 85 QFYGALFREGDCWICME 101
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPN 59
R + L+ +GSG +G D + AVK + R + H + RE+ + LKH N
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 60 IIRFKEVFLTPTEL 73
+I +VF T +
Sbjct: 81 VIGLLDVFTPATSI 94
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALK 56
M R+ + +G G F + D + E++A K + + + H + EI H++L
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
+P+++ F F + +V+E L E
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 115
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV----QREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ + T IVMEY G L + + G +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 114
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPN 59
R + L+ +GSG +G D + AVK + R + H + RE+ + LKH N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 60 IIRFKEVFLTPTEL 73
+I +VF T +
Sbjct: 89 VIGLLDVFTPATSI 102
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRFKEVFLT 69
+G G+FG ++DK +G AVK + +++ E++ L P I+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 135
Query: 70 PTELAIVMEYAAGGELFERICNAGRFSED 98
+ I ME GG L + I G ED
Sbjct: 136 GPWVNIFMELLEGGSLGQLIKQMGCLPED 164
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALKHPN 59
R + L+ +GSG +G D + AVK + R + H + RE+ + LKH N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 60 IIRFKEVFLTPTEL 73
+I +VF T +
Sbjct: 89 VIGLLDVFTPATSI 102
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALK 56
M R+ + +G G F + D + E++A K + + + H + EI H++L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
+P+++ F F + +V+E L E
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALK 56
M R+ + +G G F + D + E++A K + + + H + EI H++L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
+P+++ F F + +V+E L E
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEH----VQREIMNHRALK 56
M R+ + +G G F + D + E++A K + + + H + EI H++L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
+P+++ F F + +V+E L E
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQ---------RGQKIDEHVQREIMNHRALK-HPN 59
IG G V + + +G +AVK ++ + +++ E +RE R + HP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGELFERICNAGRFSEDEVHALLLS 106
II + + + + + +V + GELF+ + SE E +++ S
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSG-----ELYAVKYIQRGQKIDEHVQREIMNHRALK 56
+ +++K +G+G FG + W G AVK ++ G + E + L+
Sbjct: 13 ESIKLVKRLGAGQFG------EVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ 66
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
H ++R V + I+ EY A G L +
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLD 97
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 29.3 bits (64), Expect = 0.53, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN----HRALKH 57
D E + ++G G +GV + +R SG++ AVK I R + +R +M+ R +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDC 109
Query: 58 PNIIRFKEVFLTPTELAIVME 78
P + F ++ I ME
Sbjct: 110 PFTVTFYGALFREGDVWICME 130
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQ---REIMNHRALK-HP 58
++E++K +G G +G+ D+ +GE+ AVK I + Q REIM L H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 59 NIIRFKEVF 67
NI+ V
Sbjct: 70 NIVNLLNVL 78
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKID-EHVQREIMNHRALKHP 58
DR+EI IG+G++G DK + A+K I R ID + + REI L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 59 NIIRFKEVFLTP-----TELAIVMEYA 80
++++ ++ + EL +V+E A
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIA 139
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 81
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE 104
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYI--------QRGQKIDEHVQREIMNHRALKHP 58
+K +GSG FG + + W E VK G K + E + ++ HP
Sbjct: 20 VKVLGSGAFGT--VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+++R V L+PT + +V + G L E +
Sbjct: 78 HLVRLLGVCLSPT-IQLVTQLMPHGCLLEYV 107
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYI--------QRGQKIDEHVQREIMNHRALKHP 58
+K +GSG FG + + W E VK G K + E + ++ HP
Sbjct: 43 VKVLGSGAFGT--VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGELFERI 89
+++R V L+PT + +V + G L E +
Sbjct: 101 HLVRLLGVCLSPT-IQLVTQLMPHGCLLEYV 130
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
F+ ++ IGSG FG + + G+ Y +K ++ +E +RE+ L H NI+ +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKLDHVNIVHY 69
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 83
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE 106
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 83
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE 106
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSG-----ELYAVKYIQRGQKIDEHVQREIMNHRALK 56
+ +++K +G+G FG + W G AVK ++ G + E + L+
Sbjct: 12 ESIKLVKKLGAGQFG------EVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ 65
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
H ++R V + I+ E+ A G L +
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLD 96
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.9 bits (63), Expect = 0.76, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQR--GQKID-EHVQREIMNHRALKHP 58
D + I IG G++G L DK + + A+K + R ID + + REI LK
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 59 NIIRFKEV-----FLTPTELAIVMEYA 80
IIR ++ L EL IV+E A
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIA 112
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 105
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE 128
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 87
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE 110
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN-----HRALKHPNIIRFK 64
+G G F + D + E++A K + + + H QRE M+ HR+L H +++ F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 107
Query: 65 EVFLTPTELAIVMEYAAGGELFE 87
F + +V+E L E
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE 130
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHV----QREIMNHRALKH 57
DR+E+ + +G G L RD AVK ++ D +RE N AL H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIIRFKEVFLTPTELA----IVMEYAAGGELFERICNAGRFS 96
P I+ T IVMEY G L + + G +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 114
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMN----HRALKH 57
D E + ++G G +GV + +R SG++ AVK I R + +R +M+ R +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDC 65
Query: 58 PNIIRFKEVFLTPTELAIVME 78
P + F ++ I ME
Sbjct: 66 PFTVTFYGALFREGDVWICME 86
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
+I + IG+G FG R K G+ A+K ++ G Q+ D + IM
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ--FD 102
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPN++ + V + IV+E+ G L
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 7 LKDIGSGNFGVAKLVRDKWSGELYAVKYIQR---GQKIDEHVQREIMNHRALKHPNIIRF 63
L+ +GSG +G D +G A+K + R + + RE+ + ++H N+I
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 64 KEVFLTPTE 72
+VF TP E
Sbjct: 90 LDVF-TPDE 97
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 2 DRFEILKDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI 49
+R+EI+ +G G FG V + V + G A+K I+ +K E + EI
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEI 81
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
+ ++E L IG G FG R + +G+ A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIIRFKEVFLT 69
N++ E+ T
Sbjct: 77 ENVVNLIEICRT 88
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
+ ++E L IG G FG R + +G+ A+K + + REI + LKH
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 58 PNIIRFKEVFLT 69
N++ E+ T
Sbjct: 76 ENVVNLIEICRT 87
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
+ ++E L IG G FG R + +G+ A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIIRFKEVFLT 69
N++ E+ T
Sbjct: 77 ENVVNLIEICRT 88
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNII 61
F++ +G G +GV K +GE+ A+K I+ K REI + KH NII
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNII 61
F++ +G G +GV K +GE+ A+K I+ K REI + KH NII
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1 MDRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI---QRGQKIDEHVQREIMNHRALKH 57
+ ++E L IG G FG R + +G+ A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIIRFKEVFLT 69
N++ E+ T
Sbjct: 77 ENVVNLIEICRT 88
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 3 RFEILKDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI--MNHRALKHPN 59
R+EI+ +G G FG V + + K G AVK ++ + E + EI + H PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQK--IDEHVQREIMNHRALKHPNII 61
F++ +G G +GV K +GE+ A+K I+ K REI + KH NII
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 3 RFEILKDIGSGNFG-VAKLVRDKWSGELYAVKYIQRGQKIDEHVQREI--MNHRALKHPN 59
R+EI+ +G G FG V + + K G AVK ++ + E + EI + H PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
F + K IG GNFG +L ++ ++ E A+K
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK 40
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
F + K IG GNFG +L ++ ++ E A+K
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK 40
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
F + K IG GNFG +L ++ ++ E A+K
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK 35
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
F + K IG GNFG +L ++ ++ E A+K
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK 61
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 43 EHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
E + E M L+HPN++ V L+++ Y + G+L E
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
IGSG FG + + G+ Y ++ ++ +E +RE+ L H NI+ +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYN---NEKAEREVKALAKLDHVNIVHY 70
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 43 EHVQREIMNHRALKHPNIIRFKEVFLTPTELAIVMEYAAGGELFE 87
E + E M L+HPN++ V L+++ Y + G+L E
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV E G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALK 56
I K +G+G FG R K + A+K ++ G Q+ D + IM
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 104
Query: 57 HPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
HPNIIR + V + IV E G L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI A +H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 86 IGINDIIRAPT 96
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI A +H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 86 IGINDIIRAPT 96
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 8 KDIGSGNFG-VAKLVRDKWSGE---LYAVKYIQRG----QKIDEHVQREIMNHRALKHPN 59
K IG+G FG V K + SG+ A+K ++ G Q++D + IM H N
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ--FSHHN 107
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGEL 85
IIR + V + I+ EY G L
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGAL 133
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 6 ILKDIGSGNFGVAKLVRDKWSGEL---YAVKYIQRG----QKIDEHVQREIMNHRALKHP 58
I K +G+G FG R K + A+K ++ G Q+ D + IM HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ--FDHP 77
Query: 59 NIIRFKEVFLTPTELAIVMEYAAGGEL 85
NIIR + V + IV E G L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSL 104
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 4 FEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPNIIRF 63
FE + +G G FG R+ YA+K I+ ++ + E+ +L H ++R+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 64 KEVFL 68
+L
Sbjct: 68 YAAWL 72
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An
Autoinhibitory Dimer
Length = 316
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ 36
D E + ++G G +GV + R SG++ AVK I+
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR 68
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYI--QRGQKIDEHVQREIMNHRALKHPNI 60
R+ LK +G G G+ D + A+K I Q + +H REI R L H NI
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV-KHALREIKIIRRLDHDNI 70
Query: 61 IRFKEVF 67
++ E+
Sbjct: 71 VKVFEIL 77
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 73 LAIVMEYAAGGELFERICNAG--RFSEDEVHALL 104
L I+ME GGELF RI G F+E E ++
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 115
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 73 LAIVMEYAAGGELFERICNAG--RFSEDEVHALL 104
L I+ME GGELF RI G F+E E ++
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex
With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 8 KDIGSGNFGVAKLVRDKWSGELYAVK 33
K IG GNFG +L ++ ++ E A+K
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIK 31
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 88 IGINDIIRAPT 98
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 8 KDIGSGNFGVAKLV--------RDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKHPN 59
+++G G FG L +DK + +K + D H + E++ + L+H +
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN--LQHEH 76
Query: 60 IIRFKEVFLTPTELAIVMEYAAGGEL 85
I++F V + L +V EY G+L
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDL 102
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
+R+ + + IGSG+FG L D +GE A+K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 2 DRFEILKDIGSGNFGVAKLVRDKWSGELYAVK 33
+R+ + + IGSG+FG L D +GE A+K
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQRGQKI-----DEHVQREIMNHRALKHPNIIRFK 64
+G G++G K V D + AVK +++ + + +V++EI R L+H N+I+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 65 EVFLT--PTELAIVMEYAAGG--ELFERICNAGRFSEDEVHA 102
+V ++ +VMEY G E+ + + RF + H
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHG 113
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 88 IGINDIIRAPT 98
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
R+E+LK IG G+FG D + A+K ++ ++ EI R L+H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI---RILEH 149
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 10 IGSGNFGVAKLVRDKWSGELYAVKYIQR-GQKIDEHVQREIMN-HRALKHPNIIRFKEVF 67
+G G + + +G+ YAVK I++ V RE+ ++ + NI+ E F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 68 LTPTELAIVMEYAAGGELFERICNAGRFSEDEV 100
T +V E GG + I F+E E
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA 113
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQRGQKIDEHVQREIMNHRALKH 57
R+E+LK IG G+FG D + A+K ++ ++ EI R L+H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI---RILEH 149
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 89 IGINDIIRAPT 99
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 90 IGINDIIRAPT 100
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 81 IGINDIIRAPT 91
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 88 IGINDIIRAPT 98
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 88 IGINDIIRAPT 98
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 82 IGINDIIRAPT 92
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 82 IGINDIIRAPT 92
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 89 IGINDIIRAPT 99
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 88 IGINDIIRAPT 98
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 2 DRFEILKDIGSGNFGVA--KLVRDKWSGEL---YAVKYIQRGQKIDEHVQ--REIMNHRA 54
++ +L+++G G+FG+ RD GE AVK + + E ++ E +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 55 LKHPNIIRFKEVFLTPTELAIVMEYAAGGEL 85
+++R V +VME A G+L
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 106
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 92 IGINDIIRAPT 102
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVKYIQ--RGQKIDEHVQREIMNHRALKHPNI 60
R+ L IG G +G+ D + A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 IRFKEVFLTPT 71
I ++ PT
Sbjct: 84 IGINDIIRAPT 94
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated
Kinase (gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated
Kinase (gak)
Length = 337
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 3 RFEILKDIGSGNFGVAKLVRDKWSGELYAVK-YIQRGQKIDEHVQREIMNHRALK-HPNI 60
R + + + G F +D SG YA+K + ++ + + +E+ + L HPNI
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 61 IRF 63
++F
Sbjct: 89 VQF 91
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,419,414
Number of Sequences: 62578
Number of extensions: 124266
Number of successful extensions: 1683
Number of sequences better than 100.0: 780
Number of HSP's better than 100.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 591
Number of HSP's gapped (non-prelim): 793
length of query: 111
length of database: 14,973,337
effective HSP length: 75
effective length of query: 36
effective length of database: 10,279,987
effective search space: 370079532
effective search space used: 370079532
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)