Your job contains 1 sequence.
>033800
MDSPWAIQPSYSTLSISTSRFSAESSGTDSFGSRMSPITGGEASCHSPDLDSPHLEAREN
AMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGYDSDATDVT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033800
(111 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 202 8.5e-16 1
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 191 1.5e-14 1
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 161 2.1e-11 1
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 157 7.7e-11 1
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 153 3.0e-10 1
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 151 4.3e-10 1
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 138 7.6e-09 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 136 9.3e-09 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 133 3.8e-08 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 133 4.0e-08 1
TAIR|locus:2207155 - symbol:AT1G05290 species:3702 "Arabi... 131 5.5e-08 1
TAIR|locus:2168083 - symbol:AT5G59990 "AT5G59990" species... 93 6.3e-08 2
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 129 8.1e-08 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 129 8.5e-08 1
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 129 8.5e-08 1
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 114 6.1e-07 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 121 6.9e-07 1
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 113 9.6e-07 1
TAIR|locus:2178441 - symbol:AT5G53420 "AT5G53420" species... 112 3.4e-06 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 114 5.8e-06 1
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 111 7.2e-06 1
TAIR|locus:2132902 - symbol:AT4G27900 "AT4G27900" species... 108 9.1e-06 1
TAIR|locus:2120850 - symbol:CIL "AT4G25990" species:3702 ... 85 1.1e-05 2
TAIR|locus:2062617 - symbol:AT2G32310 "AT2G32310" species... 107 1.8e-05 1
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 107 2.9e-05 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 106 3.2e-05 1
TAIR|locus:2090374 - symbol:ASML2 "activator of spomin::L... 101 5.0e-05 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 102 6.4e-05 1
TAIR|locus:2051099 - symbol:AT2G33350 "AT2G33350" species... 103 7.3e-05 1
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 105 9.7e-05 1
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 101 0.00011 1
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 103 0.00013 1
TAIR|locus:2195518 - symbol:AT1G63820 species:3702 "Arabi... 97 0.00019 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 99 0.00020 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 98 0.00025 1
TAIR|locus:2177911 - symbol:AT5G41380 "AT5G41380" species... 92 0.00072 1
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 202 (76.2 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 51/109 (46%), Positives = 67/109 (61%)
Query: 5 WAIQPSYSTLSISTSRFSAESSGTD--SFGSRMSPITGGEASCHSPDLDS----PHLEAR 58
+A +P++S +IS S + ESS D G+ S GE + P L H R
Sbjct: 258 FASKPAHS--NISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTR 315
Query: 59 ENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKT-EGYDSD 106
NA+MRYKEKKKAR+ DK+++Y SRKARAD R+RV+GRF+K E YD D
Sbjct: 316 NNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYD 364
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 191 (72.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 5 WAIQPSYSTLSISTSRFSAESSGTD--SFG-SRMSPITGG-EASCHSPDLD---SPHLEA 57
++ +P++S +IS S + ES+ D G S M ++ + CH D S H
Sbjct: 258 YSSKPAHS--NISFSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASSHATT 315
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKT-EGYDSDATDVT 111
R NA+MRYKEKKKAR+ DK+++Y SRK RAD R+RV+GRF+K+ E YD D T
Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSPT 370
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 41/95 (43%), Positives = 58/95 (61%)
Query: 14 LSISTSRFSAESSGTDSFGSRMSP-ITGGEASCHSPDLDSPHLEARENAMMRYKEKKKAR 72
+S+S S + ES+ TD +SP G++ S S + + R+ A RYK+KK R
Sbjct: 231 MSLSMSNLTGESNATDYQDCGISPGFLIGDSPWESNVEVSFNPKLRDEAKKRYKQKKSKR 290
Query: 73 RQDKQIQYPSRKARADARKRVQGRFLKT-EGYDSD 106
KQI+Y SRKARAD RKRV+GRF+K+ E ++ D
Sbjct: 291 MFGKQIRYASRKARADTRKRVKGRFVKSGETFEYD 325
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 157 (60.3 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 41/93 (44%), Positives = 54/93 (58%)
Query: 22 SAESSGTDSFGSRMSP-ITGGEASCHSP-DLDSPHLEARENAMMRYKEKKKARRQDKQIQ 79
+ E++ D MSP EA + ++ P +AR A +RYKEKK R KQI+
Sbjct: 271 TGENNAADYQDCGMSPGFIMSEAPWETNFEVSCP--QARNEAKLRYKEKKLKRSFGKQIR 328
Query: 80 YPSRKARADARKRVQGRFLKT-EGYDSDATDVT 111
Y SRKARAD RKRV+GRF+K + YD D + T
Sbjct: 329 YASRKARADTRKRVKGRFVKAGDSYDYDPSSPT 361
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 153 (58.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 41/99 (41%), Positives = 53/99 (53%)
Query: 7 IQPSYSTLSISTSRFSAESSGTDSFGSRMSPITGGEASCHSPDL-----DSPHL-EAREN 60
+QP+ S + F +E S + G SC + L D L + R +
Sbjct: 329 VQPTKSESNNRPITFGSEKGSNSSSDLHFTEHIAG-TSCKTTRLVATKADLERLAQNRGD 387
Query: 61 AMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
AM RYKEK+K RR DK I+Y SRKARAD R RV+GRF+K
Sbjct: 388 AMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVK 426
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 151 (58.2 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
R+NAM RYKEKKK RR DK I+Y +RKARA+ R RV+GRF+K
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 138 (53.6 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 35 MSP-ITGGEASCHSPDLDSPHLEARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRV 93
M P IT + H +++S LE R +A+ RYKEKKK+RR +K I+Y SRK RA++R R+
Sbjct: 268 MVPVITSTRSMTH--EINS--LE-RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRI 322
Query: 94 QGRFLK 99
+GRF K
Sbjct: 323 RGRFAK 328
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 136 (52.9 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 35/106 (33%), Positives = 60/106 (56%)
Query: 10 SYSTLSISTSRFSAESSGTDSFGSRMSPITGGEASCHSPDLDSPHLEA----RENAMMRY 65
S S +S F ++ T + + P +GG + + ++P ++ RE ++RY
Sbjct: 178 SASKISQQGFNFINQTVSTRTIDVPLVPESGG-VTAEMTNTETPAVQLSPAEREARVLRY 236
Query: 66 KEKKKARRQDKQIQYPSRKARADARKRVQGRFLK-TEGYDSDATDV 110
+EK+K R+ +K I+Y SRKA A+ R R++GRF K T+ ++D DV
Sbjct: 237 REKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDV 282
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 133 (51.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/92 (41%), Positives = 52/92 (56%)
Query: 15 SISTSRFSA----ESSGTDSFGSRMSPITGGEASCHSPDLD-SPHLEA--RENAMMRYKE 67
SIS S A +S+ D SR+ G P L S H + RE ++RY+E
Sbjct: 276 SISFSSMEAGIVPDSTVIDMPNSRILTPAGAINLFSGPSLQMSLHFSSMDREARVLRYRE 335
Query: 68 KKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
KKKAR+ +K I+Y +RKA A+AR R++GRF K
Sbjct: 336 KKKARKFEKTIRYETRKAYAEARPRIKGRFAK 367
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 133 (51.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 38/92 (41%), Positives = 52/92 (56%)
Query: 15 SISTSRFSA----ESSGTDSFGSRMSPITGGEASCHSPDLD-SPHLEA--RENAMMRYKE 67
SIS S A +S+ D SR+ G P L S H + RE ++RY+E
Sbjct: 288 SISFSSMEAGIVPDSTVIDMPNSRILTPAGAINLFSGPSLQMSLHFSSMDREARVLRYRE 347
Query: 68 KKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
KKKAR+ +K I+Y +RKA A+AR R++GRF K
Sbjct: 348 KKKARKFEKTIRYETRKAYAEARPRIKGRFAK 379
>TAIR|locus:2207155 [details] [associations]
symbol:AT1G05290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002684 GO:GO:0003700 EMBL:DQ446230 IPI:IPI00535628
RefSeq:NP_172021.2 UniGene:At.51486 EnsemblPlants:AT1G05290.1
GeneID:837025 KEGG:ath:AT1G05290 TAIR:At1g05290 OMA:FEILQIF
PhylomeDB:Q1PFY3 ProtClustDB:CLSN2920218 ArrayExpress:Q1PFY3
Genevestigator:Q1PFY3 Uniprot:Q1PFY3
Length = 369
Score = 131 (51.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEG-YDSD--ATDV 110
RE A RY EKKK R+ KQI+Y SRK+ AD +KR++GRF K YD D A D+
Sbjct: 307 REEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTKAGADYDYDPRANDI 362
>TAIR|locus:2168083 [details] [associations]
symbol:AT5G59990 "AT5G59990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015475 EMBL:AY924872
IPI:IPI00537727 RefSeq:NP_200807.1 UniGene:At.55631
EnsemblPlants:AT5G59990.1 GeneID:836121 KEGG:ath:AT5G59990
TAIR:At5g59990 HOGENOM:HOG000064609 InParanoid:Q9FJD8 OMA:RESSTVW
PhylomeDB:Q9FJD8 ProtClustDB:CLSN2686501 ArrayExpress:Q9FJD8
Genevestigator:Q9FJD8 Uniprot:Q9FJD8
Length = 241
Score = 93 (37.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
E ++ + +Y+ K+ R +K+I+Y RK AD+R R++GRF + +
Sbjct: 161 EEKKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARND 206
Score = 52 (23.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 9 PSYSTLSIS-TSRFSAES-SGTDSFGSRMSPITGGEASCHSP 48
P + L +S S ++AE+ SG F S M+ GG +SC SP
Sbjct: 41 PPLALLMMSQNSLYAAEAVSGFGYFDSGMNG-GGGSSSCDSP 81
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 129 (50.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGYDSDATDV 110
RE ++RY+EKKK R+ DK I+Y SRKA A+ R R++GRF K +++A ++
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEI 330
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 129 (50.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGYDSDA 107
RE ++RY+EKKK R+ +K I+Y SRKA A+ R R++GRF K + D +A
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEA 335
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 129 (50.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 9 PSYSTL-SISTS--RFSAESSGTDSFGSRMSPITGGEASCHSPDLDSPHLEARENAMMRY 65
PS S S+STS + G + S IT +S D + ++ RE ++RY
Sbjct: 237 PSQSVSHSVSTSSIEYGVVPDGNTNNSVNRSTIT---SSTTGGDHQASSMD-REARVLRY 292
Query: 66 KEKKKARRQDKQIQYPSRKARADARKRVQGRFLK-TEGYDSD 106
+EK+K R+ +K I+Y SRKA A++R R++GRF K TE + D
Sbjct: 293 REKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 34/108 (31%), Positives = 60/108 (55%)
Query: 8 QPSYSTLSISTSRFSAESSGTDSFGSRMSP--ITGGEASCHSPDLDSPHLEA-----REN 60
Q S + + ++R A S ++ GS+ + I G +S P + + RE
Sbjct: 76 QKQDSPIPVESNREKAASKEVEA-GSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREA 134
Query: 61 AMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGYDSDAT 108
A+M+++ K+K R DK+++Y SRK A+ R RV+G+F++T +SDA+
Sbjct: 135 ALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRT--VNSDAS 180
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 121 (47.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
RE ++RY+EK+K R+ +K I+Y SRKA A+ R RV GRF K E
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 113 (44.8 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 48 PDLDSPHLEARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
P ++ RE +++RYKEK+++R K+I+Y RK AD R R +GRF+K E
Sbjct: 141 PVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKRE 194
>TAIR|locus:2178441 [details] [associations]
symbol:AT5G53420 "AT5G53420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 EMBL:AY099753 EMBL:BT000280 IPI:IPI00547333
RefSeq:NP_568793.1 UniGene:At.8948 PRIDE:Q8L602
EnsemblPlants:AT5G53420.1 GeneID:835423 KEGG:ath:AT5G53420
TAIR:At5g53420 InParanoid:Q8L602 OMA:TINENQD PhylomeDB:Q8L602
ProtClustDB:CLSN2690008 ArrayExpress:Q8L602 Genevestigator:Q8L602
Uniprot:Q8L602
Length = 264
Score = 112 (44.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
E R + RYK KK R ++I+Y RKA AD++ RV+GRF KTE
Sbjct: 216 EDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTE 261
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 114 (45.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 34/108 (31%), Positives = 60/108 (55%)
Query: 8 QPSYSTLSISTSRFSAESSGTDSFGSRMSP--ITGGEASCHSPDLDSPHLEA-----REN 60
Q S + + ++R A S ++ GS+ + I G +S P + + RE
Sbjct: 361 QKQDSPIPVESNREKAASKEVEA-GSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREA 419
Query: 61 AMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGYDSDAT 108
A+M+++ K+K R DK+++Y SRK A+ R RV+G+F++T +SDA+
Sbjct: 420 ALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRT--VNSDAS 465
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 111 (44.1 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
RE +++RYKEK++ R K+I+Y RK A+ R RV+GRF+K E
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRE 337
>TAIR|locus:2132902 [details] [associations]
symbol:AT4G27900 "AT4G27900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002687 EMBL:AL161572 EMBL:AL035524 EMBL:AY062469
EMBL:AY093297 IPI:IPI00527124 PIR:T02891 RefSeq:NP_194519.1
RefSeq:NP_849461.1 UniGene:At.26998 IntAct:Q9SUE8 PRIDE:Q9SUE8
EnsemblPlants:AT4G27900.1 EnsemblPlants:AT4G27900.2 GeneID:828903
KEGG:ath:AT4G27900 TAIR:At4g27900 HOGENOM:HOG000241629
InParanoid:Q9SUE8 OMA:ISCTSED PhylomeDB:Q9SUE8
ProtClustDB:CLSN2685530 Genevestigator:Q9SUE8 Uniprot:Q9SUE8
Length = 261
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
E R + RY+ KK R ++I+Y RKA AD++ R++GRF KTE
Sbjct: 212 EDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTE 257
>TAIR|locus:2120850 [details] [associations]
symbol:CIL "AT4G25990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002687 HOGENOM:HOG000238782
ProtClustDB:CLSN2680548 EMBL:AB493701 IPI:IPI00538830
RefSeq:NP_849445.1 UniGene:At.2953 EnsemblPlants:AT4G25990.2
GeneID:828705 KEGG:ath:AT4G25990 TAIR:At4g25990 eggNOG:NOG266168
OMA:ISTRRPR PhylomeDB:C0SVJ8 ArrayExpress:C0SVJ8
Genevestigator:C0SVJ8 Uniprot:C0SVJ8
Length = 409
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQ 94
RE +++RYKEK++ R K+I+Y RK AD R R++
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 21 FSAESSGTDSFGSRMSPITG-GEASCHSPDLDSPHLEARENAMM 63
FS++ + T FG+ SP++ EAS L P++ EN +
Sbjct: 69 FSSKKAKTQIFGTNKSPLSDYDEAS----QLLLPYVSIEENEFL 108
>TAIR|locus:2062617 [details] [associations]
symbol:AT2G32310 "AT2G32310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 IPI:IPI00516370 RefSeq:NP_180790.2 UniGene:At.38094
UniGene:At.68045 EnsemblPlants:AT2G32310.1 GeneID:817792
KEGG:ath:AT2G32310 Uniprot:F4ISV4
Length = 325
Score = 107 (42.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 9 PSYSTLSISTSRFSAESSGTDSFGSRMSPITGGEASCHSPDLDSPHLEARENAMMRYKEK 68
PS ST+ +S+S S+ SS + + E P L + RE A RY EK
Sbjct: 227 PSSSTV-VSSSSSSSSSSSENQQDHHEQVVPPNELD---P-LTIQRNQYREEAKQRYFEK 281
Query: 69 KKARRQDKQIQYPSRKARADARKRVQGRFLKTEG-YDSD 106
K++R+ K +Y SR A +KR +GRF+K + +D+D
Sbjct: 282 KRSRKFVKAHRYESRAQTAAKKKRSRGRFVKNDDEFDND 320
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 107 (42.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
RE +++RYKEK++ R K+I+Y RK AD R R++GRF++
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVR 424
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
RE ++RYKEK++ R K+I+Y RK A+ R R++GRF+K
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386
>TAIR|locus:2090374 [details] [associations]
symbol:ASML2 "activator of spomin::LUC2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0010182 "sugar mediated signaling pathway" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0010182
EMBL:AC023838 EMBL:AP000385 EMBL:AY085594 EMBL:AY885244
IPI:IPI00524505 RefSeq:NP_566437.1 UniGene:At.39532 STRING:Q9LDL9
EnsemblPlants:AT3G12890.1 GeneID:820472 KEGG:ath:AT3G12890
TAIR:At3g12890 eggNOG:NOG274941 HOGENOM:HOG000152986
InParanoid:Q9LDL9 OMA:FARNNDT PhylomeDB:Q9LDL9
ProtClustDB:CLSN2914977 Genevestigator:Q9LDL9 Uniprot:Q9LDL9
Length = 251
Score = 101 (40.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 55 LEARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
+E R++ +MRY +KK R +K I+Y RK AD R RV+GRF +
Sbjct: 136 VEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFAR 180
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 102 (41.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 48 PDLDSPHLEA-RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
P ++ + + RE + RY++K+K R +K+I+Y RK AD R R++GRF++
Sbjct: 267 PGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 319
>TAIR|locus:2051099 [details] [associations]
symbol:AT2G33350 "AT2G33350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 ProtClustDB:CLSN2680683 EMBL:AY600556 IPI:IPI00520380
RefSeq:NP_180893.2 UniGene:At.50819 EnsemblPlants:AT2G33350.1
GeneID:817898 KEGG:ath:AT2G33350 TAIR:At2g33350 InParanoid:Q6E267
OMA:GSEINKP PhylomeDB:Q6E267 Genevestigator:Q6E267 Uniprot:Q6E267
Length = 410
Score = 103 (41.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGY 103
E R+ + RY +K+ R +K+I+Y RK AD+R RV+GRF K + +
Sbjct: 309 EQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEF 356
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 105 (42.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 39 TGGEASCHSPDL-DSPHLEARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRF 97
+G + S +L D + RE A+ ++++K+K R K+++Y SRK A+ R RV+G+F
Sbjct: 649 SGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQF 708
Query: 98 LKTEGYDSDATDV 110
++ +D D+
Sbjct: 709 VRKTAAATDDNDI 721
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTEGY 103
E R+ + RY +K+ R K+I+Y RK AD+R RV+GRF K + +
Sbjct: 286 EQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEF 333
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 55 LEARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFL-KTEGYDSD 106
L+ RE A+++++ K+ R DK+I+Y +RK A+ R RV+G+F+ K G + D
Sbjct: 530 LDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 582
>TAIR|locus:2195518 [details] [associations]
symbol:AT1G63820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002684 GenomeReviews:CT485782_GR
HOGENOM:HOG000090374 ProtClustDB:CLSN2681537 EMBL:AK176159
IPI:IPI00542615 RefSeq:NP_176567.2 UniGene:At.50956
EnsemblPlants:AT1G63820.1 GeneID:842685 KEGG:ath:AT1G63820
TAIR:At1g63820 eggNOG:NOG240378 InParanoid:Q67ZF8 OMA:TQRNFTK
PhylomeDB:Q67ZF8 ArrayExpress:Q67ZF8 Genevestigator:Q67ZF8
Uniprot:Q67ZF8
Length = 293
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 11 YSTLSIST-SR-FSAESSGTDSFGSRMSPIT---GGEASCHSPDLDSPHLEARENAMMRY 65
YST + R F+ + S + + SP T G E S S E R+ + +Y
Sbjct: 143 YSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSS---EERKEKISKY 199
Query: 66 KEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
+ K+ R K I+Y RK AD R RV+GRF + +
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARND 235
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 4 PWAI-QPSYSTLSIST-SRFSAESSGTDSFGSRMSPITGGEASCHSPDLDSPHLEARENA 61
PW+ +P + IS FS +G +S + GG S EAR
Sbjct: 312 PWSSGEPPERDMDISGWPAFSMVENGGES--THQKQYVGG--CLPSSGFGDGGREAR--- 364
Query: 62 MMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
+ RY+EK++ R K+I+Y RK A+ R R++GRF+K
Sbjct: 365 VSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 98 (39.6 bits), Expect = 0.00025, P = 0.00025
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 58 RENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLK 99
RE + RY+EK++ R K+I+Y RK A+ R R++GRF+K
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398
>TAIR|locus:2177911 [details] [associations]
symbol:AT5G41380 "AT5G41380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY800647 EMBL:AY924846
IPI:IPI00519705 RefSeq:NP_198954.2 UniGene:At.51252
EnsemblPlants:AT5G41380.1 GeneID:834140 KEGG:ath:AT5G41380
TAIR:At5g41380 HOGENOM:HOG000090374 InParanoid:Q5Q0A4 OMA:VVEIPNI
PhylomeDB:Q5Q0A4 ProtClustDB:CLSN2681537 Genevestigator:Q5Q0A4
Uniprot:Q5Q0A4
Length = 307
Score = 92 (37.4 bits), Expect = 0.00072, P = 0.00072
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 56 EARENAMMRYKEKKKARRQDKQIQYPSRKARADARKRVQGRFLKTE 101
E R+ + +Y+ K+ R K I+Y RK AD+R R++GRF + +
Sbjct: 213 EERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARND 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.123 0.349 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 111 111 0.00091 102 3 11 23 0.37 31
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 529 (56 KB)
Total size of DFA: 105 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.74u 0.11s 13.85t Elapsed: 00:00:00
Total cpu time: 13.75u 0.11s 13.86t Elapsed: 00:00:00
Start: Fri May 10 04:24:36 2013 End: Fri May 10 04:24:36 2013