Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>033813
MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR
ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033813
        (111 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006359 - symbol:PSBTN "AT3G21055" species:3...   184  2.3e-14   1
TAIR|locus:2033915 - symbol:AT1G51400 "AT1G51400" species...   177  1.3e-13   1


>TAIR|locus:505006359 [details] [associations]
            symbol:PSBTN "AT3G21055" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009543 "chloroplast thylakoid lumen"
            evidence=ISS] [GO:0030095 "chloroplast photosystem II"
            evidence=ISS] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0010207
            "photosystem II assembly" evidence=RCA] [GO:0015979
            "photosynthesis" evidence=RCA] [GO:0019684 "photosynthesis, light
            reaction" evidence=RCA] [GO:0035304 "regulation of protein
            dephosphorylation" evidence=RCA] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AP000604 GO:GO:0009535 GO:GO:0015979
            GO:GO:0009523 EMBL:X98078 EMBL:AY093364 EMBL:AF326859 EMBL:AF324686
            EMBL:AF339682 EMBL:AY062605 EMBL:AY087758 EMBL:Z17733
            IPI:IPI00524730 RefSeq:NP_566674.1 UniGene:At.25529 STRING:Q39195
            PaxDb:Q39195 PRIDE:Q39195 EnsemblPlants:AT3G21055.1 GeneID:821657
            KEGG:ath:AT3G21055 TAIR:At3g21055 eggNOG:NOG313712
            HOGENOM:HOG000071084 InParanoid:Q39195 OMA:RASTSDN PhylomeDB:Q39195
            ProtClustDB:PLN00058 Genevestigator:Q39195 GermOnline:AT3G21055
            Uniprot:Q39195
        Length = 103

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 45/96 (46%), Positives = 57/96 (59%)

Query:    15 SMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRRELVFXXXXXXXXXX 74
             ++AK P+AT  +R  L VV   AS+     S+E K  ++SS+  RR+L+F          
Sbjct:    13 AVAKVPSATGGRR--LSVVR--ASTSDNTPSLEVK--EQSSTTMRRDLMFTAAAAAVCSL 66

Query:    75 XXXXXXESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
                   E EEPKRGT  AKKKYA VCVTMPTA+ICR
Sbjct:    67 AKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102


>TAIR|locus:2033915 [details] [associations]
            symbol:AT1G51400 "AT1G51400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0030095 "chloroplast photosystem
            II" evidence=ISS] [GO:0009543 "chloroplast thylakoid lumen"
            evidence=ISS] [GO:0009611 "response to wounding" evidence=IEP]
            [GO:0010193 "response to ozone" evidence=IEP] [GO:0010224 "response
            to UV-B" evidence=IEP] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] EMBL:CP002684 GO:GO:0009611 EMBL:AC024261
            GO:GO:0010193 GO:GO:0009535 GO:GO:0010224 EMBL:AC006085
            UniGene:At.11631 UniGene:At.66913 UniGene:At.68288
            ProtClustDB:PLN00058 EMBL:AF385721 EMBL:AY050320 EMBL:AY133673
            IPI:IPI00524381 PIR:B96552 RefSeq:NP_564589.1 STRING:Q9SYE2
            PRIDE:Q9SYE2 EnsemblPlants:AT1G51400.1 GeneID:841564
            KEGG:ath:AT1G51400 TAIR:At1g51400 InParanoid:Q9SYE2 OMA:MRRDLVF
            PhylomeDB:Q9SYE2 Genevestigator:Q9SYE2 Uniprot:Q9SYE2
        Length = 106

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 44/99 (44%), Positives = 55/99 (55%)

Query:    12 LPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRRELVFXXXXXXX 71
             LPT ++  PA   +     + V KA+ S+    S+E K K E S   RR+LVF       
Sbjct:    11 LPT-VSNLPANISSNSRRSLTVVKASGSE-NTTSLENK-KQEQSMKMRRDLVFTAAAAAV 67

Query:    72 XXXXXXXXXESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
                      + +EPKRGT  AKKKYAPVCVTMPTA+ICR
Sbjct:    68 CSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.123   0.338    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      111        85   0.00091  102 3  11 23  0.49    29
                                                     29  0.46    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  462 (49 KB)
  Total size of DFA:  83 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.86u 0.10s 9.96t   Elapsed:  00:00:02
  Total cpu time:  9.86u 0.10s 9.96t   Elapsed:  00:00:02
  Start:  Fri May 10 04:45:31 2013   End:  Fri May 10 04:45:33 2013

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