BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033813
(111 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224054994|ref|XP_002298398.1| predicted protein [Populus trichocarpa]
gi|118487685|gb|ABK95667.1| unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488867|gb|ABK96243.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489889|gb|ABK96742.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222845656|gb|EEE83203.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 88/111 (79%), Gaps = 6/111 (5%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A+ L ++MAK P T R GLIV AS E V++E KNK+ESSS GRR
Sbjct: 1 MASMTMTASFLAGSTMAKQPLTT--PRRGLIVAK--ASRTTEGVNVEMKNKEESSS-GRR 55
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
+L+FAAAAAAA SIA+VA+A+ EEP+RGTP+AKKKYAP+CVTMPTARICRK
Sbjct: 56 DLMFAAAAAAAYSIARVAIAD-EEPERGTPEAKKKYAPICVTMPTARICRK 105
>gi|224106185|ref|XP_002314076.1| predicted protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 87/110 (79%), Gaps = 6/110 (5%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM A+ L ++MAK P+ T R GLIV AS E V++E KN++ESS GRR
Sbjct: 1 MASITMTASFLTGSAMAKQPSTT--PRRGLIVAK--ASRATEGVNVEMKNREESS-GGRR 55
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+FAAAAAAA SIA+VA+A+ EEP+RGTP+AKKKYAP+CVTMPTARICR
Sbjct: 56 DLMFAAAAAAAYSIARVAIAD-EEPRRGTPEAKKKYAPICVTMPTARICR 104
>gi|297852864|ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata]
gi|297340155|gb|EFH70572.1| photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata]
Length = 106
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 76/110 (69%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM + S LPT ++K PA + V KA++S EN + K E S RR
Sbjct: 1 MASMTMTS-SFLPT-VSKLPANISGNSRRSLTVVKASAS--ENTTSLENKKQEQSMKMRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+LVF AAAAA CS+AKVAMA+ EEPKRGT AKKKYAPVCVTMPTARICR
Sbjct: 57 DLVFTAAAAAVCSLAKVAMAD-EEPKRGTEAAKKKYAPVCVTMPTARICR 105
>gi|18402859|ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
gi|21542450|sp|Q39195.2|PST2_ARATH RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Nuclear encoded psbT;
AltName: Full=PsbTn; Flags: Precursor
gi|11692868|gb|AAG40037.1|AF324686_1 MSA6 [Arabidopsis thaliana]
gi|11908024|gb|AAG41441.1|AF326859_1 unknown protein [Arabidopsis thaliana]
gi|12642844|gb|AAK00364.1|AF339682_1 unknown protein [Arabidopsis thaliana]
gi|11994265|dbj|BAB01448.1| photosystem II 5 kD protein precursor [Arabidopsis thaliana]
gi|17065058|gb|AAL32683.1| photosystem II 5 kD protein precursor [Arabidopsis thaliana]
gi|20260032|gb|AAM13363.1| photosystem II 5 kD protein precursor [Arabidopsis thaliana]
gi|21593345|gb|AAM65294.1| photosystem II [Arabidopsis thaliana]
gi|332642933|gb|AEE76454.1| photosystem II subunit T [Arabidopsis thaliana]
Length = 103
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 8/110 (7%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A + P ++AK P+AT +R ++ AS+ S+E K ++SS+ RR
Sbjct: 1 MASMTMTA-TFFP-AVAKVPSATGGRRLSVV----RASTSDNTPSLEVK--EQSSTTMRR 52
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+F AAAAA CS+AKVAMAE EEPKRGT AKKKYA VCVTMPTA+ICR
Sbjct: 53 DLMFTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
>gi|297789402|ref|XP_002862672.1| hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp.
lyrata]
gi|297835070|ref|XP_002885417.1| hypothetical protein ARALYDRAFT_898540 [Arabidopsis lyrata subsp.
lyrata]
gi|297308332|gb|EFH38930.1| hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp.
lyrata]
gi|297331257|gb|EFH61676.1| hypothetical protein ARALYDRAFT_898540 [Arabidopsis lyrata subsp.
lyrata]
Length = 103
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 81/110 (73%), Gaps = 8/110 (7%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A + LP ++AK P+AT +R + V +A++S + + + K++ S+ RR
Sbjct: 1 MASMTMTA-TFLP-AIAKLPSATGGRR---LSVVRASTS---DNTPSLQVKEQCSTTMRR 52
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+F AAAAA CS+AKVAMAE EEPKRGT AKKKYA VCVTMPTA+ICR
Sbjct: 53 DLMFTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
>gi|18403499|ref|NP_564589.1| Photosystem II 5 kD protein [Arabidopsis thaliana]
gi|4836947|gb|AAD30649.1|AC006085_22 Putative photosystem II 5 KD protein [Arabidopsis thaliana]
gi|12325362|gb|AAG52621.1|AC024261_8 unknown protein; 88255-88575 [Arabidopsis thaliana]
gi|14326535|gb|AAK60312.1|AF385721_1 At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|15215584|gb|AAK91337.1| At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|22137316|gb|AAM91503.1| At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|332194541|gb|AEE32662.1| Photosystem II 5 kD protein [Arabidopsis thaliana]
Length = 106
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM + S LPT ++ PA + + V KA+ S EN + K E S RR
Sbjct: 1 MASMTMTS-SFLPT-VSNLPANISSNSRRSLTVVKASGS--ENTTSLENKKQEQSMKMRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+LVF AAAAA CS+AKVAMA+ +EPKRGT AKKKYAPVCVTMPTA+ICR
Sbjct: 57 DLVFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105
>gi|21537121|gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
Length = 106
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM + S LPT ++ PA + + V KA+ S EN + + E S RR
Sbjct: 1 MASMTMTS-SFLPT-VSNLPANISSNSRRSLTVVKASGS--ENTTSLENKEQEQSMKMRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+LVF AAAAA CS+AKVAMA+ +EPKRGT AKKKYAPVCVTMPTARICR
Sbjct: 57 DLVFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTARICR 105
>gi|408407791|sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protein, chloroplastic; Flags:
Precursor
Length = 106
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 9/112 (8%)
Query: 1 MASMTMAAASLLPTSMA--KNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNG 58
MAS+TM ++ L +++A K P+A R RG +V+ KA NV + KN +ES ++G
Sbjct: 1 MASITMMSSFLGGSTVAPAKVPSANR--RG--VVMVKAMHEGENNVVIS-KN-EESKNSG 54
Query: 59 RRELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
RREL FA AAAAACS+AK AMA+ EEPKRGTP+AKKKY+ VCVT PTARICR
Sbjct: 55 RRELFFAMAAAAACSVAKTAMAD-EEPKRGTPEAKKKYSSVCVTNPTARICR 105
>gi|351721541|ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS TM A S+L + N +A +R L+V A A + +AE VS + D SNGRR
Sbjct: 1 MASFTMTA-SILGSPTVTNRSAVATQRRSLVVNA-AKAVEAEKVSYD---NDMDGSNGRR 55
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
L+FAAAAAA CS+A MA ++EPK GTP+AKKKYAP+CVTMPTARICR
Sbjct: 56 NLMFAAAAAAVCSVA--GMAVADEPKPGTPEAKKKYAPICVTMPTARICRN 104
>gi|312283313|dbj|BAJ34522.1| unnamed protein product [Thellungiella halophila]
Length = 106
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM + S LP +++K P A + V KA++S EN + K E S RR
Sbjct: 1 MASMTMTS-SFLP-AVSKLPTAITGSNRRSLTVVKASTS--ENTTSLENRKQEQSMKMRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
++VF AAAAA CS+AK AMA+ EEPKRGT AKKKYAPVCVTMPTA+ICR
Sbjct: 57 DMVFTAAAAAVCSLAKAAMAD-EEPKRGTEAAKKKYAPVCVTMPTAKICR 105
>gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana]
Length = 103
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 8/110 (7%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A + P ++AK P+AT +R ++ AS+ S+E K ++SS+ RR
Sbjct: 1 MASMTMTA-TFFP-AVAKVPSATGGRRLSVV----RASTSDNTPSLEVK--EQSSTTMRR 52
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+F AAAAA CS+AKVAMAE EEPKRGT KKKYA VCVTM TA+ICR
Sbjct: 53 DLMFTAAAAAVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICR 102
>gi|449450974|ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 106
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASM M A S LPT+ K P++T R LIV + S++A NV+ME KN S GRR
Sbjct: 1 MASMAMTA-SFLPTTATKQPSST--ARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRR 57
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
ELV AA AA A ++EP RG+P+AK+KYAP+CVTMPTARICRK
Sbjct: 58 ELVAAAVTVAA--ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106
>gi|357457953|ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein [Medicago truncatula]
Length = 106
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM + S+L N ++ ++R L+VV + + E + + + N E S NGRR
Sbjct: 1 MASITMTS-SILGFPAVTNQSSVASQRR-LVVVNAVRAVEGEKM-IRYDNSKEGS-NGRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+FAAAAAA + A VAMA+ EEPKRGTP+AKKKYAPVCVTMPTARICR
Sbjct: 57 DLMFAAAAAAVSTFAGVAMAD-EEPKRGTPEAKKKYAPVCVTMPTARICR 105
>gi|400198|sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor
gi|18512|emb|CAA38027.1| hypothetical protein [Gossypium hirsutum]
Length = 105
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM + L T++ K +R L+V A ++ E+V M + K E + NGRR
Sbjct: 1 MASITMTTSFLSTTNLTKGSPRITQRR--LVVANAAKGAQVESVQMSGERKTEGN-NGRR 57
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
E++FAAAAAA CS+A VA AE PKRG+ +AKK YAPVCVTMPTARICR
Sbjct: 58 EMMFAAAAAAICSVAGVATAE---PKRGSAEAKKAYAPVCVTMPTARICR 104
>gi|225450089|ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vitis
vinifera]
gi|147792102|emb|CAN66292.1| hypothetical protein VITISV_027031 [Vitis vinifera]
Length = 109
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 82/112 (73%), Gaps = 4/112 (3%)
Query: 1 MASMTMAAASLLPTSMA-KNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGR 59
MAS+TM ++ L +A ++PAA +R ++ A+AA+++ E V + + K E++ NGR
Sbjct: 1 MASVTMTSSFLGGACLADRSPAAAARRRLVVVNSARAAAAEGEKVKLNYDAKKEAN-NGR 59
Query: 60 RELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
RELVFAAAAAA CS+A +AMA EPK GTP+AKK YAP+CVTMPTA+IC K
Sbjct: 60 RELVFAAAAAAVCSVAGIAMAG--EPKPGTPEAKKIYAPICVTMPTAKICHK 109
>gi|388520543|gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Query: 1 MASMTMAAASLLPTSMAKN--PAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNG 58
MAS+TM AA +S N P AT+ K L+V A + + + + + N+ E + NG
Sbjct: 1 MASITMTAAFFGGSSAIANRSPVATQRK---LVVANAAKAVEGGKMKVNYDNEKEET-NG 56
Query: 59 RRELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
RR ++FAAAAAA CS+A +A+A ++EPKRG+P+AKK YAPVCVTMPTARICR
Sbjct: 57 RRNIMFAAAAAAVCSVAGMALA-ADEPKRGSPEAKKAYAPVCVTMPTARICR 107
>gi|2129671|pir||S71280 photosystem II protein psbT - Arabidopsis thaliana
Length = 102
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A + P ++AK P+AT K A + S E + +++ + RR
Sbjct: 1 MASMTMTA-TFFP-AVAKVPSATATK-------ALRSQSLHERQHTQLRSQGTEQHHMRR 51
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+F AAAAA CS+AKVAMAE EEPKRGT KKKYA VCVTM TA+ICR
Sbjct: 52 DLMFTAAAAAVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICR 101
>gi|90186625|gb|ABD91572.1| unknown [Brassica rapa]
Length = 106
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 82/112 (73%), Gaps = 9/112 (8%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENV-SMEFKNKDESSSNG- 58
MAS+TM A + LP ++AK P+AT +R ++ +SK+EN S+E K K+E SS
Sbjct: 1 MASITMTA-TFLP-AVAKLPSATSGRRMSVV-----RASKSENTTSLEVKTKEEQSSTTM 53
Query: 59 RRELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
RR+L+F AAAAA C++AK AMA+ EEPKRGT AKKKYA VCVTMPTA+ICR
Sbjct: 54 RRDLMFTAAAAAVCALAKAAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICR 105
>gi|255544866|ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223547402|gb|EEF48897.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 106
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MASMTM A+ L +++ + P A R GLIV + ++ E V++E KNK+ESSS GRR
Sbjct: 1 MASMTMTASFLAGSTLTRQPFT--APRRGLIVAKASKVTEGERVNVEMKNKEESSS-GRR 57
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
+LVFAAAAAAA S+AKVAMA+ EPK GT DAKKKYA +CV+MPTA+IC K
Sbjct: 58 DLVFAAAAAAAFSVAKVAMAD--EPKAGTLDAKKKYASICVSMPTAKICHK 106
>gi|356557172|ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Glycine max]
Length = 105
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 73/112 (65%), Gaps = 8/112 (7%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS TM A S+L N A +R L+V A A + +AE VS + D SNGRR
Sbjct: 1 MASFTMTA-SILGGPAVTNRLAVATQRRSLVVNA-AKAVEAEKVSYD---NDMDGSNGRR 55
Query: 61 ELVFAAAAAA-ACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
L+FAAAAAA CS+A MA ++EPK GTP AKKKYAP+CVTMPTARICR
Sbjct: 56 NLMFAAAAAAAVCSVA--GMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 105
>gi|206586409|gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
kurrooa]
Length = 102
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 9/110 (8%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM + ++ AK T RGG+ +V AS ++E +++ K E S+N RR
Sbjct: 1 MASVTMTTSFFCRSAAAKQLPTT--GRGGVAMVR--ASKESEKLTVNVK---EESNNTRR 53
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+L+FA AA A SIA AMA+ EPKRGT +AKKKYA VCVT PTARIC+
Sbjct: 54 DLMFAMAAVVASSIANFAMAD--EPKRGTVEAKKKYAAVCVTNPTARICK 101
>gi|418730082|gb|AFX66986.1| photosystem II 5 kDa protein [Solanum tuberosum]
Length = 112
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNG-R 59
MASMTM SL S+A A A RG +V+ KA+S+ +E ++ NK E ++NG R
Sbjct: 1 MASMTMTT-SLAGGSVAALTKAPVATRGARVVMVKASSNVSEGENVVMSNKKEINNNGGR 59
Query: 60 RELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
REL FA AAAAACS+A VAMA+ +EPKRG+P+AKKKY VCV+ PTARICR
Sbjct: 60 RELFFAMAAAAACSVAGVAMAD-DEPKRGSPEAKKKYFQVCVSNPTARICR 109
>gi|388517973|gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 78/112 (69%), Gaps = 10/112 (8%)
Query: 1 MASMTMAAASL-LPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGR 59
MAS TM A+ L P +++ AT+ + V AA+++A V + K +E S+NGR
Sbjct: 1 MASFTMTASILGSPVLTSRSAVATQRR-----FVVNAAATRA--VEGDNKVNEEGSNNGR 53
Query: 60 RELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
R L+F +AAAA CS+A +A+A+ EPK G+P+AKKKYAPVCVTMPTAR+CRK
Sbjct: 54 RNLMFVSAAAAVCSVAGIALAD--EPKNGSPEAKKKYAPVCVTMPTARVCRK 103
>gi|225435415|ref|XP_002282731.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Vitis
vinifera]
Length = 122
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 18 KNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKD-ESSSNGRRELVFAAAAAAACSIAK 76
++P+ T R GL++ A +S+ E S+ KN E NGRR+ VFAA A AAC++AK
Sbjct: 35 QHPSTTTTARRGLLM---AKTSRQE-PSLNLKNSSKEDRRNGRRDFVFAATAPAACTVAK 90
Query: 77 VAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
+AMA ++PK GTP+A KK+A VCVTMPTARI K
Sbjct: 91 IAMA--DDPKVGTPEA-KKHAAVCVTMPTARIYHK 122
>gi|255553552|ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223543089|gb|EEF44624.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 104
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 75/111 (67%), Gaps = 7/111 (6%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TMAA+ L S+ T A+R +VVA AA+ + V M ++ ESS NGRR
Sbjct: 1 MASITMAASFLSSNSLGSQSPVT-ARR--TLVVANAAAG-GQKVKMNHDSEKESS-NGRR 55
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
+L+FAA AAAA + +A +EEPK GTP+AKK Y+PVCVTMPTARIC K
Sbjct: 56 DLMFAAVAAAA--CSVAGVAAAEEPKAGTPEAKKFYSPVCVTMPTARICHK 104
>gi|351724515|ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycine max]
gi|255628337|gb|ACU14513.1| unknown [Glycine max]
Length = 104
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS TM A S+L N +A +R ++V A + S + E VS D + SN RR
Sbjct: 1 MASFTMTA-SILGCPAVTNRSAAATQRRSVVVNAASKSVEGEKVSY-----DNNGSNARR 54
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
L+FA AAAA MA ++EPK GT +AKKKYAPVCVT PTARICR
Sbjct: 55 NLMFATAAAAV-CSFAAGMALADEPKPGTSEAKKKYAPVCVTNPTARICRN 104
>gi|357457955|ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|388501032|gb|AFK38582.1| unknown [Medicago truncatula]
Length = 105
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 8/111 (7%)
Query: 1 MASMTMAAASL-LPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGR 59
MAS+TM ++ + P ++ AT+ + +V A A + V + D+ SNGR
Sbjct: 1 MASITMTSSMVGFPAVTNRSSVATQRR---FVVSAVRAVEGEKTVKYD---DDKEGSNGR 54
Query: 60 RELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
R+L+FAAAAAA CS+A VAMA+ +EP+RGTP+AKKKY PVCVT PTARICR
Sbjct: 55 RDLMFAAAAAAVCSVAGVAMAD-DEPRRGTPEAKKKYGPVCVTNPTARICR 104
>gi|351721322|ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
gi|255626973|gb|ACU13831.1| unknown [Glycine max]
Length = 101
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS TM A+ ++ K A +R L+VV+ A KAE + + N D SNGRR
Sbjct: 1 MASFTMTASIFGCPAVTKRSAVAAQRR--LLVVSAA---KAEGEKVSYDNND---SNGRR 52
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
L+FA AAAA + MA ++EPK GT +AKKKYAPVCVT PTA ICR
Sbjct: 53 NLMFAVAAAA--VPSVAGMAVADEPKPGTSEAKKKYAPVCVTNPTASICR 100
>gi|326505794|dbj|BAJ91136.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511609|dbj|BAJ91949.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527901|dbj|BAJ89002.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 106
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM A+ L ++A + A +RG +VVA+AA + + E +++GRR
Sbjct: 1 MASLTMMAS--LSAAVAVDRRAAAPRRG--LVVARAAKVERQQEPAAKLAAVEPATDGRR 56
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+VFAAAAAA +I A AES+ K+GTP+AKKKYAPVC+TMPTA+IC
Sbjct: 57 AVVFAAAAAAVSAIGTAAFAESDV-KKGTPEAKKKYAPVCITMPTAKICH 105
>gi|357149799|ref|XP_003575236.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Brachypodium distachyon]
Length = 111
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAEN-VSMEFKNKDESSSNGR 59
MAS+TM A+ ++ +RGGL+V A A +++E N + GR
Sbjct: 1 MASLTMMASLSAAAVAVDRRVSSAPRRGGLVVARAAKEEPAAAKLAVESTNSTRGGAEGR 60
Query: 60 RELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARIC 109
R +VFAAAAAA ++ + A+AE + KRG+P+AKKKYA +CVTMPTA++C
Sbjct: 61 RAVVFAAAAAAVSAMGRAAVAEPDV-KRGSPEAKKKYATICVTMPTAKVC 109
>gi|116784531|gb|ABK23380.1| unknown [Picea sitchensis]
Length = 133
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 15/100 (15%)
Query: 25 AKRGGLIVVAKAASS------KAENVSMEFKNKDESSSNGRRELVFAAAAAAACSIAK-- 76
A+ G + +V K+ S ENV+M+ K +D+ RR ++F AAAAA + A
Sbjct: 34 AQVGQVFMVNKSFKSSQDWAVHDENVTMK-KKEDDQERMQRRRMMFTAAAAAVSAAASQG 92
Query: 77 -VAMAESE-----EPKRGTPDAKKKYAPVCVTMPTARICR 110
+AMA E EPKRGTP+AKK YA VCVTMPTA +C
Sbjct: 93 MMAMAAGEKPTGPEPKRGTPEAKKLYARVCVTMPTASVCH 132
>gi|116780809|gb|ABK21826.1| unknown [Picea sitchensis]
gi|116783964|gb|ABK23162.1| unknown [Picea sitchensis]
gi|116784546|gb|ABK23387.1| unknown [Picea sitchensis]
gi|116788640|gb|ABK24950.1| unknown [Picea sitchensis]
gi|116790160|gb|ABK25523.1| unknown [Picea sitchensis]
gi|116790663|gb|ABK25695.1| unknown [Picea sitchensis]
gi|116792256|gb|ABK26293.1| unknown [Picea sitchensis]
gi|148908397|gb|ABR17312.1| unknown [Picea sitchensis]
gi|148909067|gb|ABR17636.1| unknown [Picea sitchensis]
gi|224284484|gb|ACN39976.1| unknown [Picea sitchensis]
gi|224285061|gb|ACN40258.1| unknown [Picea sitchensis]
Length = 133
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Query: 42 ENVSMEFKNKDESSSNGRRELVFAAAAAAACSIAK---VAMAESE-----EPKRGTPDAK 93
ENV+M+ K +D+ RR ++F AAAAA + A +AMA E EPKRGTP+AK
Sbjct: 57 ENVTMK-KKEDDQERMQRRRMMFTAAAAAVSAAASQGMMAMAAGEKPTGPEPKRGTPEAK 115
Query: 94 KKYAPVCVTMPTARICR 110
K YA VCVTMPTA +C
Sbjct: 116 KLYARVCVTMPTASVCH 132
>gi|116778588|gb|ABK20924.1| unknown [Picea sitchensis]
gi|116779591|gb|ABK21354.1| unknown [Picea sitchensis]
gi|116780817|gb|ABK21829.1| unknown [Picea sitchensis]
gi|116789533|gb|ABK25281.1| unknown [Picea sitchensis]
gi|116789730|gb|ABK25360.1| unknown [Picea sitchensis]
gi|116790451|gb|ABK25620.1| unknown [Picea sitchensis]
gi|116790460|gb|ABK25623.1| unknown [Picea sitchensis]
gi|116790472|gb|ABK25627.1| unknown [Picea sitchensis]
gi|116790654|gb|ABK25692.1| unknown [Picea sitchensis]
gi|116793932|gb|ABK26937.1| unknown [Picea sitchensis]
gi|224285816|gb|ACN40622.1| unknown [Picea sitchensis]
gi|224285853|gb|ACN40640.1| unknown [Picea sitchensis]
Length = 133
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Query: 42 ENVSMEFKNKDESSSNGRRELVFAAAAAAACSIAK---VAMAESE-----EPKRGTPDAK 93
ENV+M+ K +D+ RR ++F AAAAA + A +AMA E EPKRGTP+AK
Sbjct: 57 ENVTMK-KKEDDQERMQRRRMMFTAAAAAVSAAASQGMMAMAAGEKPTGPEPKRGTPEAK 115
Query: 94 KKYAPVCVTMPTARICR 110
K YA VCVTMPTA +C
Sbjct: 116 KLYARVCVTMPTASVCH 132
>gi|224286517|gb|ACN40965.1| unknown [Picea sitchensis]
Length = 133
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Query: 42 ENVSMEFKNKDESSSNGRRELVFAAAAAAACSIAK---VAMAESE-----EPKRGTPDAK 93
ENV+++ K +D+ RR ++F AAAAA + A +AMA E EPKRGTP+AK
Sbjct: 57 ENVTVK-KKEDDQERMQRRRMMFTAAAAAVSAAASQGMMAMAAGEKPTGPEPKRGTPEAK 115
Query: 94 KKYAPVCVTMPTARICR 110
K YA VCVTMPTA +C
Sbjct: 116 KLYARVCVTMPTASVCH 132
>gi|116792874|gb|ABK26536.1| unknown [Picea sitchensis]
Length = 133
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 42 ENVSMEFKNKDESSSNGRRELVFAAAAAAACSIAK---VAMAESE-----EPKRGTPDAK 93
ENV+M+ K +D+ RR ++F AAAAA + A +AMA E EP RGTP+AK
Sbjct: 57 ENVTMK-KKEDDQERMQRRRMMFTAAAAAVSAAASQGMMAMAAGEKPTGPEPNRGTPEAK 115
Query: 94 KKYAPVCVTMPTARICR 110
K YA VCVTMPTA +C
Sbjct: 116 KLYARVCVTMPTASVCH 132
>gi|242062124|ref|XP_002452351.1| hypothetical protein SORBIDRAFT_04g024130 [Sorghum bicolor]
gi|241932182|gb|EES05327.1| hypothetical protein SORBIDRAFT_04g024130 [Sorghum bicolor]
Length = 152
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 26/26 (100%)
Query: 84 EPKRGTPDAKKKYAPVCVTMPTARIC 109
+PK+G+P+AKKKYAP+CVTMPTA+IC
Sbjct: 125 DPKKGSPEAKKKYAPICVTMPTAKIC 150
>gi|81475|pir||S03277 photosystem II 5K protein - spinach (fragment)
Length = 29
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 83 EEPKRGTPDAKKKYAPVCVTMPTARICRK 111
EEPKRGTP+AKKKYAPV VTMP+ARI K
Sbjct: 1 EEPKRGTPEAKKKYAPVXVTMPSARIXYK 29
>gi|218191058|gb|EEC73485.1| hypothetical protein OsI_07816 [Oryza sativa Indica Group]
Length = 119
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 23/25 (92%)
Query: 86 KRGTPDAKKKYAPVCVTMPTARICR 110
KRGTP+AKKKYA +CVTMPTA++C
Sbjct: 94 KRGTPEAKKKYAQICVTMPTAKVCH 118
>gi|115446925|ref|NP_001047242.1| Os02g0581100 [Oryza sativa Japonica Group]
gi|113536773|dbj|BAF09156.1| Os02g0581100 [Oryza sativa Japonica Group]
Length = 119
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 23/25 (92%)
Query: 86 KRGTPDAKKKYAPVCVTMPTARICR 110
KRGTP+AKKKYA +CVTMPTA++C
Sbjct: 94 KRGTPEAKKKYAQICVTMPTAKVCH 118
>gi|224055160|ref|XP_002298426.1| predicted protein [Populus trichocarpa]
gi|222845684|gb|EEE83231.1| predicted protein [Populus trichocarpa]
Length = 89
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TMAA+ L +++ AT R L+V + A ++ E V K + GRR
Sbjct: 1 MASITMAASFLSSSALTSQSLATATGR--LVVASAARGNEVEKVKWNHDIKKDGGY-GRR 57
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAK 93
+++FAAAAAA CS+A +A+AE PK GTP+A
Sbjct: 58 DVMFAAAAAAVCSVAGIAVAEG--PKPGTPEAN 88
>gi|226508866|ref|NP_001143858.1| uncharacterized protein LOC100276652 precursor [Zea mays]
gi|194708120|gb|ACF88144.1| unknown [Zea mays]
gi|195628426|gb|ACG36043.1| hypothetical protein [Zea mays]
gi|413937488|gb|AFW72039.1| hypothetical protein ZEAMMB73_331736 [Zea mays]
Length = 104
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 1 MASMTMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRR 60
MAS+TM A S A A ++RG VV A + + + + +++GRR
Sbjct: 1 MASLTMMA------SFAAVAVAAPSRRGTFAVVRSAKVDRCQEPATLAATEARPAADGRR 54
Query: 61 ELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
++ AAAAAA + A A PK GTP+AKKKYA +CVTMPTA++C
Sbjct: 55 AVMLAAAAAAV-AAIGGAGAAMAGPKNGTPEAKKKYAAICVTMPTAKVCH 103
>gi|50251714|dbj|BAD27635.1| unknown protein [Oryza sativa Japonica Group]
Length = 178
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 21/22 (95%)
Query: 86 KRGTPDAKKKYAPVCVTMPTAR 107
KRGTP+AKKKYA +CVTMPTA+
Sbjct: 94 KRGTPEAKKKYAQICVTMPTAK 115
>gi|168054209|ref|XP_001779525.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669107|gb|EDQ55701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 81 ESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+ + PK+G+ +AKK YA +CV+ PTA IC
Sbjct: 207 QYDGPKKGSKEAKKTYASICVSQPTASICH 236
>gi|168054145|ref|XP_001779493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669075|gb|EDQ55669.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 115
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 81 ESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
+ + PK+G+ +AKK YA +CV+ PTA IC
Sbjct: 85 QYDGPKKGSKEAKKTYANICVSQPTASICH 114
>gi|448344051|ref|ZP_21532967.1| hypothetical protein C486_20424 [Natrinema gari JCM 14663]
gi|445621765|gb|ELY75234.1| hypothetical protein C486_20424 [Natrinema gari JCM 14663]
Length = 458
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 5 TMAAASLLPTSMAKNPAATRAKRGGLIVVAKAASSKAENVSMEFKNKDESSSNGRRELVF 64
T A S L T+ + P ATR + +++VAK A++ E+ S++ N + +++ RR F
Sbjct: 90 TEYAESYLNTTASSRPTATRIESVDVVMVAKVATNSIESRSIDLMNNESATNTTRRVGHF 149
Query: 65 A 65
A
Sbjct: 150 A 150
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.118 0.315
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,394,558,301
Number of Sequences: 23463169
Number of extensions: 41374716
Number of successful extensions: 157624
Number of sequences better than 100.0: 122
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 157294
Number of HSP's gapped (non-prelim): 258
length of query: 111
length of database: 8,064,228,071
effective HSP length: 79
effective length of query: 32
effective length of database: 6,210,637,720
effective search space: 198740407040
effective search space used: 198740407040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)