Query 033815
Match_columns 111
No_of_seqs 140 out of 1191
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.3E-41 4.4E-46 232.1 13.1 108 3-110 44-151 (169)
2 4gpr_A Ubiquitin-conjugating e 100.0 1.2E-41 4.1E-46 228.5 12.4 107 3-109 44-150 (151)
3 2r0j_A Ubiquitin carrier prote 100.0 9.1E-42 3.1E-46 228.7 11.7 107 3-109 41-147 (149)
4 2aak_A UBC1, ubiquitin conjuga 100.0 1.7E-41 5.7E-46 228.0 12.6 108 3-110 44-151 (152)
5 2ayv_A Ubiquitin-conjugating e 100.0 1.5E-41 5.3E-46 231.1 12.5 106 3-108 61-166 (166)
6 2c2v_B Ubiquitin-conjugating e 100.0 5.9E-42 2E-46 230.7 9.8 107 3-109 45-151 (154)
7 3h8k_A Ubiquitin-conjugating e 100.0 2.7E-41 9.1E-46 229.4 12.8 107 3-109 44-163 (164)
8 1z2u_A Ubiquitin-conjugating e 100.0 2.2E-41 7.7E-46 226.9 12.3 107 3-109 44-150 (150)
9 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-41 6E-46 230.6 11.3 107 3-109 45-164 (165)
10 2c4o_A Ubiquitin-conjugating e 100.0 2.9E-41 9.8E-46 229.6 12.4 107 3-109 59-165 (165)
11 1fxt_A Ubiquitin-conjugating e 100.0 1E-41 3.5E-46 228.4 9.7 107 3-109 42-149 (149)
12 1zdn_A Ubiquitin-conjugating e 100.0 1.8E-41 6E-46 229.2 10.2 106 3-108 53-158 (158)
13 1jat_A Ubiquitin-conjugating e 100.0 2.7E-41 9.2E-46 227.6 10.2 108 3-110 45-152 (155)
14 2bep_A Ubiquitin-conjugating e 100.0 8.6E-41 2.9E-45 226.0 12.3 107 3-109 51-158 (159)
15 1wzv_A Ubiquitin-conjugating e 100.0 4.8E-41 1.6E-45 226.4 10.9 108 3-110 44-152 (155)
16 2e2c_A Ubiquitin conjugating e 100.0 8.8E-41 3E-45 225.3 12.1 107 3-110 49-155 (156)
17 1yh2_A HSPC150 protein similar 100.0 1.1E-40 3.9E-45 227.4 12.4 107 3-109 44-154 (169)
18 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.3E-40 4.5E-45 231.1 12.3 108 3-110 85-193 (193)
19 2gjd_A Ubiquitin-conjugating e 100.0 1.4E-40 4.9E-45 224.5 12.2 107 3-109 49-157 (157)
20 3rcz_B SUMO-conjugating enzyme 100.0 3.1E-40 1.1E-44 224.1 12.4 106 3-108 55-162 (163)
21 3fn1_B NEDD8-conjugating enzym 100.0 2.2E-40 7.4E-45 225.5 11.6 107 3-109 54-167 (167)
22 2grr_A Ubiquitin-conjugating e 100.0 3.3E-40 1.1E-44 223.5 12.0 108 3-110 52-161 (161)
23 3k9o_A Ubiquitin-conjugating e 100.0 4.4E-40 1.5E-44 229.8 12.7 108 3-110 48-156 (201)
24 3bzh_A Ubiquitin-conjugating e 100.0 4E-40 1.4E-44 228.9 12.4 107 3-109 88-194 (194)
25 1i7k_A Ubiquitin-conjugating e 100.0 2E-40 6.8E-45 227.9 10.3 106 3-109 70-175 (179)
26 2pwq_A Ubiquitin conjugating e 100.0 2.5E-40 8.5E-45 233.1 10.3 107 3-109 63-170 (216)
27 1c4z_D UBCH7, ubiquitin conjug 100.0 1.2E-40 4.1E-45 224.2 8.3 108 3-110 42-150 (154)
28 1tte_A Ubiquitin-conjugating e 100.0 2E-40 6.8E-45 233.5 9.2 107 3-109 43-150 (215)
29 2onu_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 221.9 9.7 107 3-109 39-147 (152)
30 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-39 3.6E-44 220.9 11.5 105 3-107 44-148 (160)
31 2z5d_A Ubiquitin-conjugating e 100.0 3.3E-40 1.1E-44 226.8 8.6 107 3-109 61-169 (179)
32 2y9m_A Ubiquitin-conjugating e 100.0 2.4E-39 8.3E-44 221.4 12.4 107 3-109 58-168 (172)
33 3rz3_A Ubiquitin-conjugating e 100.0 2.1E-39 7.1E-44 223.6 11.3 108 3-110 48-174 (183)
34 3e46_A Ubiquitin-conjugating e 100.0 5E-39 1.7E-43 230.9 12.7 108 3-110 100-208 (253)
35 3o2u_A NEDD8-conjugating enzym 100.0 2E-39 6.8E-44 224.8 10.2 105 3-107 73-177 (190)
36 2nvu_C NEDD8-conjugating enzym 100.0 3.4E-39 1.2E-43 222.0 11.3 105 3-107 64-168 (180)
37 1yf9_A Ubiquitin carrier prote 100.0 1.8E-39 6.1E-44 221.8 9.0 107 3-109 48-156 (171)
38 1yrv_A Ubiquitin-conjugating l 100.0 6.5E-39 2.2E-43 218.7 9.2 103 3-106 63-168 (169)
39 2awf_A Ubiquitin-conjugating e 100.0 4E-39 1.4E-43 220.3 8.0 101 3-103 58-172 (172)
40 4ddg_A Ubiquitin-conjugating e 100.0 4.4E-37 1.5E-41 232.9 12.5 108 3-110 43-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 4.2E-35 1.4E-39 199.5 8.7 100 3-102 60-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 8.1E-34 2.8E-38 209.3 8.5 106 3-108 120-242 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 4.3E-34 1.5E-38 192.7 3.3 89 3-92 65-156 (156)
44 2a4d_A Ubiquitin-conjugating e 100.0 2.9E-32 9.9E-37 184.3 6.1 84 3-86 69-156 (160)
45 1jat_B Ubiquitin-conjugating e 100.0 3.9E-33 1.3E-37 184.6 0.5 86 3-89 50-138 (138)
46 2fo3_A Ubiquitin-conjugating e 100.0 3.5E-31 1.2E-35 172.6 7.7 76 3-78 46-122 (125)
47 2hlw_A Ubiquitin-conjugating e 100.0 6.6E-32 2.3E-36 184.2 4.0 84 3-86 79-166 (170)
48 2h2y_A Ubiquitin-conjugating e 100.0 1.4E-30 4.9E-35 171.9 8.1 75 3-77 60-135 (136)
49 2a7l_A Hypothetical ubiquitin- 100.0 1.4E-29 4.8E-34 167.2 7.9 71 3-73 64-136 (136)
50 2f4w_A Ubiquitin-conjugating e 99.9 9.1E-28 3.1E-32 165.9 10.0 95 3-99 54-154 (187)
51 1zuo_A Hypothetical protein LO 99.9 4.5E-30 1.5E-34 177.3 -1.8 99 3-109 71-182 (186)
52 3r3q_A Suppressor protein STP2 99.8 3.7E-20 1.3E-24 125.0 7.1 74 5-79 73-161 (162)
53 2z6o_A UFM1-conjugating enzyme 99.8 7.3E-21 2.5E-25 128.1 2.5 64 3-66 66-144 (172)
54 3obq_A Tumor susceptibility ge 99.6 2.1E-15 7.2E-20 100.1 5.6 68 5-74 62-138 (146)
55 3kpa_A Probable ubiquitin fold 99.5 1.8E-15 6.3E-20 100.0 1.5 60 3-65 68-145 (168)
56 2ebm_A RWD domain-containing p 95.4 0.031 1.1E-06 35.1 5.0 24 10-33 55-78 (128)
57 2daw_A RWD domain containing p 95.0 0.095 3.3E-06 34.2 6.6 23 11-33 76-98 (154)
58 3zqs_A E3 ubiquitin-protein li 94.5 0.13 4.4E-06 35.0 6.5 52 8-73 36-87 (186)
59 2ebk_A RWD domain-containing p 93.9 0.16 5.3E-06 31.9 5.6 22 11-32 57-78 (128)
60 2dax_A Protein C21ORF6; RWD do 93.1 0.29 1E-05 31.6 6.0 24 11-34 74-97 (152)
61 2yz0_A Serine/threonine-protei 93.0 0.077 2.6E-06 33.8 3.1 23 11-33 63-85 (138)
62 2day_A Ring finger protein 25; 93.0 0.076 2.6E-06 33.3 3.0 24 10-33 59-82 (128)
63 1ukx_A GCN2, GCN2 EIF2alpha ki 92.1 0.089 3.1E-06 33.3 2.5 23 10-32 63-85 (137)
64 2cwb_A Chimera of immunoglobul 85.9 0.15 5.1E-06 31.7 0.0 31 76-106 22-52 (108)
65 2fkn_A Urocanate hydratase; ro 58.5 10 0.00034 29.6 3.8 30 82-111 277-306 (552)
66 1x87_A Urocanase protein; stru 58.1 10 0.00035 29.5 3.8 30 82-111 276-305 (551)
67 1uwk_A Urocanate hydratase; hy 57.8 10 0.00036 29.5 3.8 30 82-111 281-310 (557)
68 2bum_A Protocatechuate 3,4-dio 36.4 31 0.001 23.5 3.1 25 8-32 109-138 (209)
69 4g2e_A Peroxiredoxin; redox pr 31.6 46 0.0016 20.6 3.2 32 40-71 125-156 (157)
70 2yzh_A Probable thiol peroxida 30.2 34 0.0012 21.3 2.5 33 40-72 139-171 (171)
71 1taf_B TFIID TBP associated fa 29.1 79 0.0027 17.6 4.1 32 79-110 22-53 (70)
72 2f4m_B UV excision repair prot 29.0 65 0.0022 17.5 3.1 20 81-100 37-56 (61)
73 2jsy_A Probable thiol peroxida 26.6 53 0.0018 20.1 2.9 33 40-72 134-166 (167)
74 4gqc_A Thiol peroxidase, perox 26.2 75 0.0026 19.8 3.6 33 40-72 127-159 (164)
75 1pve_A HHR23B, UV excision rep 25.8 66 0.0022 18.1 2.8 21 81-101 39-59 (72)
76 3keb_A Probable thiol peroxida 25.7 55 0.0019 22.3 3.0 37 40-76 143-179 (224)
77 2jrw_A Cyclic extended PEP.1; 25.6 33 0.0011 15.1 1.2 15 24-38 5-19 (26)
78 3kxt_A Chromatin protein CREN7 25.5 38 0.0013 18.2 1.6 11 14-24 46-56 (56)
79 3zqs_A E3 ubiquitin-protein li 25.2 21 0.00072 24.0 0.7 55 9-68 123-179 (186)
80 1h3o_B Transcription initiatio 24.4 1E+02 0.0036 17.4 4.1 34 76-109 19-52 (76)
81 1f53_A Yeast killer toxin-like 22.8 30 0.001 20.0 1.0 11 21-31 70-80 (84)
82 2bum_B Protocatechuate 3,4-dio 21.2 43 0.0015 23.3 1.7 25 8-32 134-165 (241)
83 1f35_A Olfactory marker protei 21.0 9.1 0.00031 24.6 -1.6 56 36-91 67-126 (162)
84 1psq_A Probable thiol peroxida 20.8 98 0.0034 18.9 3.3 31 40-70 132-162 (163)
85 2xsu_A Catechol 1,2 dioxygenas 20.3 46 0.0016 24.1 1.8 16 8-23 187-202 (312)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-41 Score=232.08 Aligned_cols=108 Identities=62% Similarity=1.107 Sum_probs=105.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
..|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+++|.+.|+|+++|.+||.+|+++|.+|++++|+|
T Consensus 44 ~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n 123 (169)
T 1ayz_A 44 ADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPAN 123 (169)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSS
T ss_pred CCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
.+||++|++|+++|.++||+|++++++.
T Consensus 124 ~~aa~~~~~d~~~y~~~~r~~~~~~a~~ 151 (169)
T 1ayz_A 124 VEAATLFKDHKSQYVKRVKETVEKSWED 151 (169)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999863
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-41 Score=228.48 Aligned_cols=107 Identities=40% Similarity=0.742 Sum_probs=104.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 123 (151)
T 4gpr_A 44 DDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLD 123 (151)
T ss_dssp SSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSS
T ss_pred CCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++|++|+++|.++||+|+++++.
T Consensus 124 ~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 124 PEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999974
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=9.1e-42 Score=228.66 Aligned_cols=107 Identities=38% Similarity=0.725 Sum_probs=104.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|+++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 41 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 120 (149)
T 2r0j_A 41 DGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLD 120 (149)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++|++|+++|.++||+|+++++.
T Consensus 121 ~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 121 SKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999975
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.7e-41 Score=228.00 Aligned_cols=108 Identities=88% Similarity=1.370 Sum_probs=104.8
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 123 (152)
T 2aak_A 44 DDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123 (152)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSS
T ss_pred CCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCcccc
Confidence 47999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
.+||++|++|+++|.++||+|++++++.
T Consensus 124 ~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 124 SEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999864
No 5
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-41 Score=231.12 Aligned_cols=106 Identities=41% Similarity=0.807 Sum_probs=103.8
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|
T Consensus 61 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln 140 (166)
T 2ayv_A 61 EDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLV 140 (166)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSC
T ss_pred CCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHH
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSW 108 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~ 108 (111)
.+||++|++|+++|.++||+|+++++
T Consensus 141 ~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 141 PEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999985
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.9e-42 Score=230.67 Aligned_cols=107 Identities=36% Similarity=0.676 Sum_probs=102.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++|+|
T Consensus 45 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n 124 (154)
T 2c2v_B 45 QDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLA 124 (154)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--
T ss_pred CCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++|++|+++|.++||+|+++++.
T Consensus 125 ~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 125 NDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999985
No 7
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.7e-41 Score=229.41 Aligned_cols=107 Identities=39% Similarity=0.790 Sum_probs=104.1
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcc-------------ccCCCcccHHHHHHHHH
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~ 69 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|. +.|+|+++|.+||.+|+
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~ 123 (164)
T 3h8k_A 44 EDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVV 123 (164)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999997 67999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 70 SLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 70 ~ll~~p~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
++|.+|++++|+|.+||++|++|+++|.++||+|++++++
T Consensus 124 ~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 124 SMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp HHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999985
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.2e-41 Score=226.92 Aligned_cols=107 Identities=46% Similarity=0.860 Sum_probs=104.4
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n 123 (150)
T 1z2u_A 44 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 123 (150)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSC
T ss_pred CCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++|++|+++|.++||+|+++++.
T Consensus 124 ~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 124 PEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999873
No 9
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-41 Score=230.55 Aligned_cols=107 Identities=36% Similarity=0.742 Sum_probs=104.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCc-------------cccCCCcccHHHHHHHHH
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l-------------~~~W~p~~~i~~il~~i~ 69 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|+++|.+||.+|+
T Consensus 45 ~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 124 (165)
T 2ucz_A 45 PDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVM 124 (165)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHH
T ss_pred CCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999 577999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 70 SLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 70 ~ll~~p~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
++|.+|++++|+|.+||++|++|+++|.++||+|++++++
T Consensus 125 ~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 125 SMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp HHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999976
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.9e-41 Score=229.59 Aligned_cols=107 Identities=47% Similarity=0.870 Sum_probs=104.4
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+++|+++|+|+++|.+||.+|+++|.+|++++|+|
T Consensus 59 ~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n 138 (165)
T 2c4o_A 59 NDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 138 (165)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCcccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++|++|+++|.++||+|+++++.
T Consensus 139 ~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 139 PEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999873
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1e-41 Score=228.38 Aligned_cols=107 Identities=33% Similarity=0.682 Sum_probs=104.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|++++.+||.+|+++|.+|++++|+
T Consensus 42 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~ 121 (149)
T 1fxt_A 42 PGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQ 121 (149)
T ss_dssp SSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCS
T ss_pred CCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcc
Confidence 5799999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
|.+||++|++|+++|.++||+|++++++
T Consensus 122 n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 122 DAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999874
No 12
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-41 Score=229.20 Aligned_cols=106 Identities=35% Similarity=0.689 Sum_probs=103.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 53 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n 132 (158)
T 1zdn_A 53 EGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALN 132 (158)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSS
T ss_pred CCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHH
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSW 108 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~ 108 (111)
.+||++|++|+++|.++||+|++++|
T Consensus 133 ~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 133 EEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999985
No 13
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.7e-41 Score=227.63 Aligned_cols=108 Identities=36% Similarity=0.689 Sum_probs=105.1
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 45 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n 124 (155)
T 1jat_A 45 EQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLA 124 (155)
T ss_dssp TTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTC
T ss_pred CCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCccc
Confidence 47999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
.+||++|++|+++|.++||+|+++++..
T Consensus 125 ~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 125 NDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp CTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999863
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.6e-41 Score=225.99 Aligned_cols=107 Identities=31% Similarity=0.659 Sum_probs=104.1
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|++++.+||.+|+++|.+|++++|+
T Consensus 51 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~ 130 (159)
T 2bep_A 51 PDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQ 130 (159)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcc
Confidence 4799999999999999999999999999999999999995 899999999989999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
|.+||++|++|+++|.++||+|++++++
T Consensus 131 n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 131 DAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999985
No 15
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.8e-41 Score=226.38 Aligned_cols=108 Identities=25% Similarity=0.582 Sum_probs=104.9
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCc-cccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l-~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++| .++|+|++++.+||.+|+++|.+|++++|+
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~ 123 (155)
T 1wzv_A 44 DQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPL 123 (155)
T ss_dssp CSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCS
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchH
Confidence 5799999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
|.+||++|++|+++|.++||+++++++..
T Consensus 124 n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 124 RMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999863
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-41 Score=225.34 Aligned_cols=107 Identities=44% Similarity=0.781 Sum_probs=103.9
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 49 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n 128 (156)
T 2e2c_A 49 KDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLN 128 (156)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSC
T ss_pred CCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
.+||++| +|+++|.++||+|+++++..
T Consensus 129 ~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 129 AQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 9999999 89999999999999998753
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-40 Score=227.37 Aligned_cols=107 Identities=36% Similarity=0.730 Sum_probs=104.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcc----ccCCCcccHHHHHHHHHHhhcCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLLCDPNPN 78 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~----~~W~p~~~i~~il~~i~~ll~~p~~~ 78 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|+++
T Consensus 44 ~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~ 123 (169)
T 1yh2_A 44 ANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPD 123 (169)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTT
T ss_pred CCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCc
Confidence 57999999999999999999999999999999999999999999999998 88999999999999999999999999
Q ss_pred CCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 79 SPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 79 ~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
+|+|.+||++|++|+++|.++||+|+++++.
T Consensus 124 ~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 124 DPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp SCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred chHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999875
No 18
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-40 Score=231.14 Aligned_cols=108 Identities=36% Similarity=0.690 Sum_probs=104.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceee-CCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+
T Consensus 85 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~ 164 (193)
T 2f4z_A 85 LGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQ 164 (193)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcc
Confidence 479999999999999999999999999999999999999 5899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
|.+||++|++|+++|.++||+|++++++.
T Consensus 165 n~~aa~l~~~d~~~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 165 DAEVAKMMIENHPLFVQTAKLWTETFAKE 193 (193)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999863
No 19
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.4e-40 Score=224.51 Aligned_cols=107 Identities=39% Similarity=0.764 Sum_probs=103.9
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccc--cCCCcccHHHHHHHHHHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|+++|.+|++++|
T Consensus 49 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p 128 (157)
T 2gjd_A 49 EGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSP 128 (157)
T ss_dssp TTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCC
T ss_pred CCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCc
Confidence 579999999999999999999999999999999999999999999999987 799999999999999999999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
+|.+||++|++|+++|.++||+|++++++
T Consensus 129 ~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 129 AQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999874
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-40 Score=224.10 Aligned_cols=106 Identities=43% Similarity=0.837 Sum_probs=103.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcccc--CCCcccHHHHHHHHHHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~--W~p~~~i~~il~~i~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+||+++|... |+|+++|.+||.+|+++|.+|++++|
T Consensus 55 ~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p 134 (163)
T 3rcz_B 55 PKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASP 134 (163)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSC
T ss_pred CCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCc
Confidence 4799999999999999999999999999999999999999999999999764 99999999999999999999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSW 108 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~ 108 (111)
+|.+||++|++|+++|.++||+|+++++
T Consensus 135 ~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 135 AQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999986
No 21
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.2e-40 Score=225.53 Aligned_cols=107 Identities=26% Similarity=0.559 Sum_probs=103.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccc------cCCCcccHHHHHHHHHHhhcC-C
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN------QWSPIYDVAAILTSIQSLLCD-P 75 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~------~W~p~~~i~~il~~i~~ll~~-p 75 (111)
..|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|+++|.+ |
T Consensus 54 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~p 133 (167)
T 3fn1_B 54 DEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLL 133 (167)
T ss_dssp SSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTC
T ss_pred CCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999999999999999999975 699999999999999999999 6
Q ss_pred CCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 76 NPNSPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 76 ~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
++++|+|.+||++|++|+++|.++||+|++++++
T Consensus 134 n~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 134 NFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999974
No 22
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.3e-40 Score=223.54 Aligned_cols=108 Identities=39% Similarity=0.777 Sum_probs=104.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccc--cCCCcccHHHHHHHHHHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. .|+|++++.+||.+|+++|.+|++++|
T Consensus 52 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p 131 (161)
T 2grr_A 52 KGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSP 131 (161)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSC
T ss_pred CCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCc
Confidence 479999999999999999999999999999999999999999999999976 799999999999999999999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
+|.+||++|++|+++|.++||+++++++++
T Consensus 132 ~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 132 AQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999863
No 23
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=4.4e-40 Score=229.81 Aligned_cols=108 Identities=31% Similarity=0.660 Sum_probs=104.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+
T Consensus 48 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~ 127 (201)
T 3k9o_A 48 PDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQ 127 (201)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcc
Confidence 4799999999999999999999999999999999999995 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
|.+||++|++|+++|.++||+|+++++..
T Consensus 128 n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 128 DAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999863
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=4e-40 Score=228.88 Aligned_cols=107 Identities=39% Similarity=0.670 Sum_probs=104.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.+.|+|+++|.+||.+|++||.+|++++|+|
T Consensus 88 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln 167 (194)
T 3bzh_A 88 PGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 167 (194)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSC
T ss_pred CCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||.+|++|+++|.++||+|+++++.
T Consensus 168 ~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 168 GSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999873
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-40 Score=227.93 Aligned_cols=106 Identities=40% Similarity=0.729 Sum_probs=103.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+.|+|+++|.+||.+|+++|.+|++++|+|
T Consensus 70 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln 149 (179)
T 1i7k_A 70 AGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLN 149 (179)
T ss_dssp TTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSC
T ss_pred CCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
.+||++| +|+++|.++|+++++++++
T Consensus 150 ~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 150 THAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp HHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 9999999 9999999999999998864
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.5e-40 Score=233.12 Aligned_cols=107 Identities=37% Similarity=0.756 Sum_probs=104.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceee-CCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+
T Consensus 63 ~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPl 142 (216)
T 2pwq_A 63 EGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQ 142 (216)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcc
Confidence 479999999999999999999999999999999999999 5899999999989999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
|.+||++|++|+++|.++||+|+++++.
T Consensus 143 n~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 143 DAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999885
No 27
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.2e-40 Score=224.22 Aligned_cols=108 Identities=25% Similarity=0.669 Sum_probs=102.6
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcc-ccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+
T Consensus 42 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~ 121 (154)
T 1c4z_D 42 DNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPL 121 (154)
T ss_dssp CSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCS
T ss_pred CCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchh
Confidence 47999999999999999999999999999999999999999999999996 78999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
|.+||++|++|+++|.++||+|+++++..
T Consensus 122 n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 122 RADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp CHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999998753
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2e-40 Score=233.49 Aligned_cols=107 Identities=33% Similarity=0.682 Sum_probs=104.5
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.+.|+|++++.+||.+|+++|.+|++++|+
T Consensus 43 ~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pl 122 (215)
T 1tte_A 43 PGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQ 122 (215)
T ss_dssp EEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCS
T ss_pred CCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCcc
Confidence 4799999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
|.+||++|++|+++|.++||+|+++++.
T Consensus 123 n~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 123 DAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999875
No 29
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.1e-40 Score=221.88 Aligned_cols=107 Identities=31% Similarity=0.722 Sum_probs=103.4
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHH-HHHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.+.|+|++++.+||.+ |++||.+|++++|
T Consensus 39 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P 118 (152)
T 2onu_A 39 NGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDP 118 (152)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSC
T ss_pred CCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCc
Confidence 5799999999999999999999999999999999999995 8999999999889999999999999 6899999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
+|.+||++|++|+++|.++||+++++++.
T Consensus 119 ~n~~aa~~~~~d~~~y~~~v~~~~~~~a~ 147 (152)
T 2onu_A 119 LNSDAASLLMKDKNIYEEKVKEYVKLYAS 147 (152)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999985
No 30
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=220.91 Aligned_cols=105 Identities=31% Similarity=0.725 Sum_probs=101.9
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
..|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 44 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n 123 (160)
T 1y8x_A 44 DEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLN 123 (160)
T ss_dssp SSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSC
T ss_pred CCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHH
Q 033815 83 SEAARMFSENKREYNRRVREIVEQS 107 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~ 107 (111)
.+||++|++|+++|.++||++++..
T Consensus 124 ~~aa~~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 124 KEAAEVLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 9999999999999999999998753
No 31
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=226.77 Aligned_cols=107 Identities=33% Similarity=0.752 Sum_probs=104.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHH-HHHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.++|+|++++.+||.+ |+++|.+|++++|
T Consensus 61 ~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p 140 (179)
T 2z5d_A 61 QGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDP 140 (179)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSC
T ss_pred CCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCc
Confidence 5799999999999999999999999999999999999998 9999999999899999999999999 9999999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
+|.+||++|++|+++|.++||+|+++++.
T Consensus 141 ~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 141 LNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999875
No 32
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.4e-39 Score=221.36 Aligned_cols=107 Identities=24% Similarity=0.554 Sum_probs=103.5
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeec-ccccceee-CCCcEeecCcc-ccCCCcccHHHHHHHHHHhhcCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVS-RMFHPNIY-ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNS 79 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t-~i~HpnV~-~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~ 79 (111)
.+|||+||+|+++|.||++||++||+|+|.| +||||||+ .+|.||+++|. +.|+|++++.+||.+|+++|.+|++++
T Consensus 58 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~ 137 (172)
T 2y9m_A 58 SDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDS 137 (172)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 5799999999999999999999999999999 99999997 78999999998 789999999999999999999999999
Q ss_pred CcCHHHHHHHHH-CHHHHHHHHHHHHHHHHh
Q 033815 80 PANSEAARMFSE-NKREYNRRVREIVEQSWT 109 (111)
Q Consensus 80 p~n~~~~~~~~~-~~~~f~~~~~~~~~~~~~ 109 (111)
|+|.+||++|++ |+++|.++||+|+++++.
T Consensus 138 p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 138 PLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp CSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999874
No 33
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.1e-39 Score=223.59 Aligned_cols=108 Identities=41% Similarity=0.771 Sum_probs=103.4
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcc-------------ccCCCcccHHHHHHHHH
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~ 69 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+++|+||+++|. +.|+|+++|++||.+|+
T Consensus 48 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 127 (183)
T 3rz3_A 48 PNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 127 (183)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999996 67999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHHH------CHHHHHHHHHHHHHHHHhc
Q 033815 70 SLLCDPNPNSPANSEAARMFSE------NKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 70 ~ll~~p~~~~p~n~~~~~~~~~------~~~~f~~~~~~~~~~~~~~ 110 (111)
++|.+|++++|+|.+|+.+|++ |+++|.++|++++++++++
T Consensus 128 ~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~~ 174 (183)
T 3rz3_A 128 SLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVD 174 (183)
T ss_dssp HHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 7899999999999999874
No 34
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=5e-39 Score=230.91 Aligned_cols=108 Identities=31% Similarity=0.660 Sum_probs=104.7
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 81 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~ 81 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.+.|+|+++|.+||.+|+++|.+|++++|+
T Consensus 100 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pl 179 (253)
T 3e46_A 100 PDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQ 179 (253)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChh
Confidence 4799999999999999999999999999999999999995 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
|.+||++|++|+++|.++|++|+++++..
T Consensus 180 n~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 180 DAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999863
No 35
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2e-39 Score=224.81 Aligned_cols=105 Identities=36% Similarity=0.741 Sum_probs=101.9
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
..|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.+.|+|++++.+||.+|+++|.+|++++|+|
T Consensus 73 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln 152 (190)
T 3o2u_A 73 DEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLN 152 (190)
T ss_dssp SSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchh
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHH
Q 033815 83 SEAARMFSENKREYNRRVREIVEQS 107 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~ 107 (111)
.+||++|++|+++|.++||+|++.+
T Consensus 153 ~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 153 KDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998653
No 36
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-39 Score=221.99 Aligned_cols=105 Identities=30% Similarity=0.690 Sum_probs=102.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|
T Consensus 64 ~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n 143 (180)
T 2nvu_C 64 DEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLN 143 (180)
T ss_dssp CSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHH
Q 033815 83 SEAARMFSENKREYNRRVREIVEQS 107 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~ 107 (111)
.+||.+|++|+++|.++|+++++.+
T Consensus 144 ~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 144 KEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 9999999999999999999998854
No 37
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-39 Score=221.85 Aligned_cols=107 Identities=34% Similarity=0.694 Sum_probs=103.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeC-CCcEeecCccccCCCcccHHHHHHHH-HHhhcCCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSI-QSLLCDPNPNSP 80 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~-~G~icl~~l~~~W~p~~~i~~il~~i-~~ll~~p~~~~p 80 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+. +|+||+++|.++|+|++++.+||.+| ++||.+|++++|
T Consensus 48 ~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p 127 (171)
T 1yf9_A 48 EGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDP 127 (171)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCC
T ss_pred CCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCc
Confidence 4799999999999999999999999999999999999995 99999999998999999999999997 799999999999
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 81 ANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
+|.+||++|++|+++|.++||+++++++.
T Consensus 128 ~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 128 LNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999874
No 38
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-39 Score=218.71 Aligned_cols=103 Identities=31% Similarity=0.641 Sum_probs=98.6
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeeccccccee-eCCCcEeecCcc--ccCCCcccHHHHHHHHHHhhcCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNS 79 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV-~~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~p~~~~ 79 (111)
.+|||+||+|+++|.||++||++||+|+|.|+|||||| +.+|+||+++|+ ++|+|+++|.+||.+|+++|.+|++++
T Consensus 63 ~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~ 142 (169)
T 1yrv_A 63 QNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLEN 142 (169)
T ss_dssp TTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred CCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 57999999999999999999999999999999999999 689999999998 789999999999999999999999999
Q ss_pred CcCHHHHHHHHHCHHHHHHHHHHHHHH
Q 033815 80 PANSEAARMFSENKREYNRRVREIVEQ 106 (111)
Q Consensus 80 p~n~~~~~~~~~~~~~f~~~~~~~~~~ 106 (111)
|+|.+||++|++|+++|.++ ++++++
T Consensus 143 Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 143 PVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred chhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 99999999999999999999 888764
No 39
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4e-39 Score=220.31 Aligned_cols=101 Identities=40% Similarity=0.843 Sum_probs=70.8
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCcc-------------ccCCCcccHHHHHHHHH
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~ 69 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|. +.|+|+++|.+||.+|+
T Consensus 58 ~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~ 137 (172)
T 2awf_A 58 PDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVI 137 (172)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHH
T ss_pred CCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999996 57999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHHHCHH-HHHHHHHHH
Q 033815 70 SLLCDPNPNSPANSEAARMFSENKR-EYNRRVREI 103 (111)
Q Consensus 70 ~ll~~p~~~~p~n~~~~~~~~~~~~-~f~~~~~~~ 103 (111)
++|.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 138 sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 138 SMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp HHHSCC-----------------------------
T ss_pred HHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999999999999999999 999999976
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=4.4e-37 Score=232.90 Aligned_cols=108 Identities=45% Similarity=0.828 Sum_probs=105.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCCCCcC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 82 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n 82 (111)
.+|||+||+|+++|.||++||++||+|+|.|++|||||+++|.||+++|.+.|+|++++.+||.+|+++|.+|++++|+|
T Consensus 43 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n 122 (399)
T 4ddg_A 43 NDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 122 (399)
T ss_dssp TTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 83 SEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
.+||++|++|+++|.++||+|+++++..
T Consensus 123 ~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 123 PEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999998753
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=4.2e-35 Score=199.47 Aligned_cols=100 Identities=25% Similarity=0.611 Sum_probs=93.7
Q ss_pred ccCCCC--CCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHH-HHHHHhhcC--CCC
Q 033815 3 SILLIP--SGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCD--PNP 77 (111)
Q Consensus 3 ~~t~y~--gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il-~~i~~ll~~--p~~ 77 (111)
.+|+|+ ||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++|+.+ |++
T Consensus 60 ~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~ 139 (167)
T 4ds2_A 60 ADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRR 139 (167)
T ss_dssp TTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCC
T ss_pred CCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCC
Confidence 479999 999999999999999999999999999999999999999999999999999999975 467788875 899
Q ss_pred CCCcCHHHHHHHHHCHHHHHHHHHH
Q 033815 78 NSPANSEAARMFSENKREYNRRVRE 102 (111)
Q Consensus 78 ~~p~n~~~~~~~~~~~~~f~~~~~~ 102 (111)
++|+|.+||++|++|+++|.++||+
T Consensus 140 ~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 140 DDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp SCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred cchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=8.1e-34 Score=209.29 Aligned_cols=106 Identities=31% Similarity=0.641 Sum_probs=99.5
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecc-----cccceeeCCCcEeecCcc-------ccCCCcc-cHHHHHHHHH
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQ-------NQWSPIY-DVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~-----i~HpnV~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~ 69 (111)
.+|||+||+|+++|.||++||++||+|+|.|+ +|||||+.+|+||+++|+ +.|+|++ +|.+||.+|+
T Consensus 120 ~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIq 199 (323)
T 3ceg_A 120 ADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQ 199 (323)
T ss_dssp TTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHH
T ss_pred CCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHH
Confidence 57999999999999999999999999999998 999999999999999997 5799999 8999999999
Q ss_pred Hhhc--CCCCCCCcCHHH--HHHHHHCHHHHHHHHHHHHHHHH
Q 033815 70 SLLC--DPNPNSPANSEA--ARMFSENKREYNRRVREIVEQSW 108 (111)
Q Consensus 70 ~ll~--~p~~~~p~n~~~--~~~~~~~~~~f~~~~~~~~~~~~ 108 (111)
+||. +|++++|+|.++ +.++.+|+++|.++|++++++++
T Consensus 200 sLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A 242 (323)
T 3ceg_A 200 SLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWA 242 (323)
T ss_dssp HHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Confidence 9997 677799999987 67899999999999999999875
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=4.3e-34 Score=192.68 Aligned_cols=89 Identities=22% Similarity=0.478 Sum_probs=83.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcE---eecCccccCCCcccHHHHHHHHHHhhcCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSI---CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 79 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~i---cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~ 79 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|+| |+++|+ +|+|++++++||.+|+++|.+|++++
T Consensus 65 ~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~ 143 (156)
T 2q0v_A 65 PGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKR 143 (156)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTT
T ss_pred CCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 57999999999999999999999999999999999999999999 888886 69999999999999999999999999
Q ss_pred CcCHHHHHHHHHC
Q 033815 80 PANSEAARMFSEN 92 (111)
Q Consensus 80 p~n~~~~~~~~~~ 92 (111)
|+|++||.+|++|
T Consensus 144 p~n~~aa~~y~~n 156 (156)
T 2q0v_A 144 LPQPNEGEVYSNN 156 (156)
T ss_dssp CCCCCTTCBC---
T ss_pred cCChHHHHHhhhC
Confidence 9999999988764
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=2.9e-32 Score=184.31 Aligned_cols=84 Identities=20% Similarity=0.481 Sum_probs=80.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceee-CCCcEeecCcc--ccCCCcccHHHHHHHHHHhhc-CCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPN 78 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~ 78 (111)
.+||||||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|. ++|+|++++++||.+|+++|. +|+++
T Consensus 69 ~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~ 148 (160)
T 2a4d_A 69 PRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMK 148 (160)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTT
T ss_pred CCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCC
Confidence 479999999999999999999999999999999999999 69999999998 889999999999999999995 69999
Q ss_pred CCcCHHHH
Q 033815 79 SPANSEAA 86 (111)
Q Consensus 79 ~p~n~~~~ 86 (111)
+|+|.|||
T Consensus 149 ~P~n~eaa 156 (160)
T 2a4d_A 149 LPQPPEGQ 156 (160)
T ss_dssp CCCCCTTC
T ss_pred CCCChhhc
Confidence 99999987
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.97 E-value=3.9e-33 Score=184.62 Aligned_cols=86 Identities=19% Similarity=0.477 Sum_probs=81.0
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCC-CcE--eecCccccCCCcccHHHHHHHHHHhhcCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD-GSI--CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 79 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~-G~i--cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~ 79 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+.+ |+| |+++++ +|+|++++++||.+|+++|.+|++++
T Consensus 50 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~ 128 (138)
T 1jat_B 50 PHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKK 128 (138)
T ss_dssp SSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHT
T ss_pred CCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCC
Confidence 57999999999999999999999999999999999999986 999 898885 89999999999999999999999999
Q ss_pred CcCHHHHHHH
Q 033815 80 PANSEAARMF 89 (111)
Q Consensus 80 p~n~~~~~~~ 89 (111)
|+|++|+.+|
T Consensus 129 p~~~~~~~~y 138 (138)
T 1jat_B 129 LRQPKEGETF 138 (138)
T ss_dssp SCCCCTTCBC
T ss_pred CCCcchhhcC
Confidence 9999987543
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.97 E-value=3.5e-31 Score=172.60 Aligned_cols=76 Identities=30% Similarity=0.686 Sum_probs=69.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeeccc-ccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 78 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i-~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~ 78 (111)
.+|||+||+|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|+++|+|++++.+||.+|+++|.+|+.+
T Consensus 46 ~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 46 ENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 579999999999999999999999999999996 9999999999999999999999999999999999999998875
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.97 E-value=6.6e-32 Score=184.17 Aligned_cols=84 Identities=20% Similarity=0.481 Sum_probs=80.1
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceee-CCCcEeecCcc--ccCCCcccHHHHHHHHHHhhc-CCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPN 78 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~ 78 (111)
.+|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|+||+++|. ++|+|+++|++||.+|+++|. .|+.+
T Consensus 79 ~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~ 158 (170)
T 2hlw_A 79 PRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMK 158 (170)
T ss_dssp SSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSS
T ss_pred CCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCC
Confidence 479999999999999999999999999999999999999 69999999997 889999999999999999997 59999
Q ss_pred CCcCHHHH
Q 033815 79 SPANSEAA 86 (111)
Q Consensus 79 ~p~n~~~~ 86 (111)
+|+|.|||
T Consensus 159 ~P~n~eaa 166 (170)
T 2hlw_A 159 LPQPPEGQ 166 (170)
T ss_dssp SCCCSSCC
T ss_pred CCCCcccc
Confidence 99999986
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=1.4e-30 Score=171.94 Aligned_cols=75 Identities=28% Similarity=0.681 Sum_probs=72.3
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeeccc-ccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 77 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i-~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~ 77 (111)
.+|||+||+|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|+++|+|++++.+||.+|+++|.+|+.
T Consensus 60 ~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 60 ENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 579999999999999999999999999999996 999999999999999998999999999999999999999875
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.96 E-value=1.4e-29 Score=167.19 Aligned_cols=71 Identities=37% Similarity=0.733 Sum_probs=68.6
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccc--cceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhc
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMF--HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 73 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~--HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~ 73 (111)
.+||||||+|+++|.||++||++||+|+|.|++| ||||+.+|+||+++|+++|+|++++++||.+|+++|.
T Consensus 64 ~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 64 PGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp TTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 4799999999999999999999999999999999 9999999999999999999999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.95 E-value=9.1e-28 Score=165.88 Aligned_cols=95 Identities=21% Similarity=0.511 Sum_probs=74.2
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCc---cccCCCcccHHHHHHHHHHhhcCCCCCC
Q 033815 3 SILLIPSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL---QNQWSPIYDVAAILTSIQSLLCDPNPNS 79 (111)
Q Consensus 3 ~~t~y~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l---~~~W~p~~~i~~il~~i~~ll~~p~~~~ 79 (111)
.+|||+||+|+++|.||++||++||+|+|.|+ ||||+.+|+||+++| .+.|+|+++|.+||.+|+++|.+|+++.
T Consensus 54 ~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 54 EMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCT
T ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 47999999999999999999999999999999 999999999999999 5789999999999999999999998864
Q ss_pred C---cCHHHHHHHHHCHHHHHHH
Q 033815 80 P---ANSEAARMFSENKREYNRR 99 (111)
Q Consensus 80 p---~n~~~~~~~~~~~~~f~~~ 99 (111)
. ........+..+...|+.+
T Consensus 132 g~~~~~~~~r~~~a~~s~~~~~~ 154 (187)
T 2f4w_A 132 GSIETSDFTKRQLAVQSLAFNLK 154 (187)
T ss_dssp TBCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccccChHHHHHHHHHHHHHhhc
Confidence 4 2344445555544444433
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.95 E-value=4.5e-30 Score=177.30 Aligned_cols=99 Identities=23% Similarity=0.477 Sum_probs=86.5
Q ss_pred ccCCCCC-----------CEEEEEEEeCCCCCCCCCcceeecccccc-eeeCCCcEeecCcc-ccCCCcccHHHHHHHHH
Q 033815 3 SILLIPS-----------GTFKLTLQFTEDYPNKPPTVRFVSRMFHP-NIYADGSICLDILQ-NQWSPIYDVAAILTSIQ 69 (111)
Q Consensus 3 ~~t~y~g-----------g~f~~~i~~p~~YP~~pP~i~f~t~i~Hp-nV~~~G~icl~~l~-~~W~p~~~i~~il~~i~ 69 (111)
.+|||+| |+|+++|.||++||++||+|+|.|++||| ||+.+|.||+++|. +.|+|+++|++||.+|+
T Consensus 71 ~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~ 150 (186)
T 1zuo_A 71 PDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQIN 150 (186)
T ss_dssp TTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHH
T ss_pred CCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHH
Confidence 4789998 89999999999999999999999999999 69999999999997 67999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 70 SLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 70 ~ll~~p~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
++|.+|+... .+..++++|.+.+++++.+++-
T Consensus 151 slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~~~~ 182 (186)
T 1zuo_A 151 ATLVKGKARV--------QFGANKNQYNLARAQQSYNSIV 182 (186)
T ss_dssp HHHHHTTCEE--------CTTCCTTCCCHHHHHHHHHHHH
T ss_pred HHHcCCChhH--------hhccCHHHHhHHHHHHHHHHHH
Confidence 9999886532 3344577888888888877653
No 52
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.81 E-value=3.7e-20 Score=124.97 Aligned_cols=74 Identities=23% Similarity=0.433 Sum_probs=67.3
Q ss_pred CCCCCCE---EEEEEEeCCCCCCCCCcceeecc----------cc-cceeeCCCcEeecCccccCCC-cccHHHHHHHHH
Q 033815 5 LLIPSGT---FKLTLQFTEDYPNKPPTVRFVSR----------MF-HPNIYADGSICLDILQNQWSP-IYDVAAILTSIQ 69 (111)
Q Consensus 5 t~y~gg~---f~~~i~~p~~YP~~pP~i~f~t~----------i~-HpnV~~~G~icl~~l~~~W~p-~~~i~~il~~i~ 69 (111)
++|+||. |.+.|.||.+||++||.+.|.++ |+ |||||++|+||+++| .+|+| +.++.++|.+|+
T Consensus 73 v~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~ 151 (162)
T 3r3q_A 73 TGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELM 151 (162)
T ss_dssp CSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHH
T ss_pred ccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHH
Confidence 6899999 88999999999999999987651 77 999999999999999 46999 679999999999
Q ss_pred HhhcCCCCCC
Q 033815 70 SLLCDPNPNS 79 (111)
Q Consensus 70 ~ll~~p~~~~ 79 (111)
++|.+|+++.
T Consensus 152 ~lf~ep~~d~ 161 (162)
T 3r3q_A 152 SLLHEPPQDQ 161 (162)
T ss_dssp HTTSCCCCCC
T ss_pred HHhcCCCCCC
Confidence 9999999875
No 53
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.80 E-value=7.3e-21 Score=128.09 Aligned_cols=64 Identities=17% Similarity=0.312 Sum_probs=58.6
Q ss_pred ccCCCCCC----------EEEEEEEeCCCCCCCCCcceeecc-cccceeeCCCcEeecCccc----cCCCcccHHHHHH
Q 033815 3 SILLIPSG----------TFKLTLQFTEDYPNKPPTVRFVSR-MFHPNIYADGSICLDILQN----QWSPIYDVAAILT 66 (111)
Q Consensus 3 ~~t~y~gg----------~f~~~i~~p~~YP~~pP~i~f~t~-i~HpnV~~~G~icl~~l~~----~W~p~~~i~~il~ 66 (111)
.+|+|+|| .|+++|.||.+||.+||+|+|.+. ++||||+.+|+||++++.. .|.|+++|.++|.
T Consensus 66 ~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 66 EGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 57999999 999999999999999999999998 9999999999999999943 3559999999873
No 54
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.58 E-value=2.1e-15 Score=100.14 Aligned_cols=68 Identities=24% Similarity=0.487 Sum_probs=60.4
Q ss_pred CCCCCCEEEE--EEEeCCCCCCCCCcceeecc------cccceeeCCCcEeecCccccCCC-cccHHHHHHHHHHhhcC
Q 033815 5 LLIPSGTFKL--TLQFTEDYPNKPPTVRFVSR------MFHPNIYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCD 74 (111)
Q Consensus 5 t~y~gg~f~~--~i~~p~~YP~~pP~i~f~t~------i~HpnV~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~ 74 (111)
.+|+|+.|.+ .|.||++||++||.+ |.++ ..|||||.+|+||++.|. +|++ ..++.+++..|+++|.+
T Consensus 62 v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~-~W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 62 VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH-EWKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH-TCCTTTCCHHHHHHHHHHHHHH
T ss_pred eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc-ccCCCCCCHHHHHHHHHHHHhh
Confidence 3699999995 999999999999999 7766 589999999999999995 4988 78999999999999874
No 55
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.52 E-value=1.8e-15 Score=100.05 Aligned_cols=60 Identities=18% Similarity=0.441 Sum_probs=51.9
Q ss_pred ccCCCCCC----------EEEEEEEeCCCCCCCCCcceeecc-cccceeeCCCcEeecCccccCCC-------cccHHHH
Q 033815 3 SILLIPSG----------TFKLTLQFTEDYPNKPPTVRFVSR-MFHPNIYADGSICLDILQNQWSP-------IYDVAAI 64 (111)
Q Consensus 3 ~~t~y~gg----------~f~~~i~~p~~YP~~pP~i~f~t~-i~HpnV~~~G~icl~~l~~~W~p-------~~~i~~i 64 (111)
++|+|+|+ .|++++.||.+||.+||+|+|.+. .+||+++.+|+||+++. |+| .++|...
T Consensus 68 ~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh---wkPlW~~n~P~fGiaha 144 (168)
T 3kpa_A 68 QGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH---FFPLWARNVPYFGISHV 144 (168)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT---HHHHHHHTTTTCCHHHH
T ss_pred CCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc---cchhhHhcCCchhHHHH
Confidence 47999999 999999999999999999999995 89999999999999886 555 3555554
Q ss_pred H
Q 033815 65 L 65 (111)
Q Consensus 65 l 65 (111)
|
T Consensus 145 l 145 (168)
T 3kpa_A 145 L 145 (168)
T ss_dssp H
T ss_pred H
Confidence 4
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.37 E-value=0.031 Score=35.14 Aligned_cols=24 Identities=25% Similarity=0.548 Sum_probs=20.1
Q ss_pred CEEEEEEEeCCCCCCCCCcceeec
Q 033815 10 GTFKLTLQFTEDYPNKPPTVRFVS 33 (111)
Q Consensus 10 g~f~~~i~~p~~YP~~pP~i~f~t 33 (111)
-.+.+.|.+|++||..||.+...+
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEEEc
Confidence 367899999999999999986543
No 57
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.96 E-value=0.095 Score=34.24 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=20.0
Q ss_pred EEEEEEEeCCCCCCCCCcceeec
Q 033815 11 TFKLTLQFTEDYPNKPPTVRFVS 33 (111)
Q Consensus 11 ~f~~~i~~p~~YP~~pP~i~f~t 33 (111)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 68899999999999999996554
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.54 E-value=0.13 Score=34.99 Aligned_cols=52 Identities=17% Similarity=0.386 Sum_probs=39.5
Q ss_pred CCCEEEEEEEeCCCCCCCCCcceeecccccceeeCCCcEeecCccccCCCcccHHHHHHHHHHhhc
Q 033815 8 PSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 73 (111)
Q Consensus 8 ~gg~f~~~i~~p~~YP~~pP~i~f~t~i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~ 73 (111)
.|....++|.++.+||.++|.+...-|. | +.-.|.+..++.+++...+..+.
T Consensus 36 ~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------------~~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 36 SGREHLITLKLKAKYPAESPDYFVDFPV--P------------FCASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp TSCEEEEEEECCTTTTTSCCEEECCCSS--C------------CCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEECCCCCCCCCeeEEcCCC--C------------cccccCCCccHHHHHHHHHHHHH
Confidence 4777889999999999999988666553 1 12479988888888887766553
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.90 E-value=0.16 Score=31.91 Aligned_cols=22 Identities=18% Similarity=0.490 Sum_probs=19.1
Q ss_pred EEEEEEEeCCCCCCCCCcceee
Q 033815 11 TFKLTLQFTEDYPNKPPTVRFV 32 (111)
Q Consensus 11 ~f~~~i~~p~~YP~~pP~i~f~ 32 (111)
.+.+.|.+|.+||..+|.+...
T Consensus 57 ~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 57 PLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp EEEEEEEECSSTTSSCCCCCCC
T ss_pred EEEEEEECCCCCCCCCCeEEEE
Confidence 6788999999999999998654
No 60
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.06 E-value=0.29 Score=31.63 Aligned_cols=24 Identities=25% Similarity=0.365 Sum_probs=20.2
Q ss_pred EEEEEEEeCCCCCCCCCcceeecc
Q 033815 11 TFKLTLQFTEDYPNKPPTVRFVSR 34 (111)
Q Consensus 11 ~f~~~i~~p~~YP~~pP~i~f~t~ 34 (111)
.+.+.|.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 577889999999999999976543
No 61
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.04 E-value=0.077 Score=33.75 Aligned_cols=23 Identities=26% Similarity=0.584 Sum_probs=19.7
Q ss_pred EEEEEEEeCCCCCCCCCcceeec
Q 033815 11 TFKLTLQFTEDYPNKPPTVRFVS 33 (111)
Q Consensus 11 ~f~~~i~~p~~YP~~pP~i~f~t 33 (111)
...+.+.+|++||..+|.|...+
T Consensus 63 ~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 63 SITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp EEEEEEECCSSTTSSCCEEEEEC
T ss_pred EEEEEEECCCCCCCCCCeEEEec
Confidence 56788899999999999997654
No 62
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.98 E-value=0.076 Score=33.29 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=20.6
Q ss_pred CEEEEEEEeCCCCCCCCCcceeec
Q 033815 10 GTFKLTLQFTEDYPNKPPTVRFVS 33 (111)
Q Consensus 10 g~f~~~i~~p~~YP~~pP~i~f~t 33 (111)
-.+.+.|.+|++||..+|.|...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 367788999999999999997765
No 63
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=92.10 E-value=0.089 Score=33.32 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=19.9
Q ss_pred CEEEEEEEeCCCCCCCCCcceee
Q 033815 10 GTFKLTLQFTEDYPNKPPTVRFV 32 (111)
Q Consensus 10 g~f~~~i~~p~~YP~~pP~i~f~ 32 (111)
-.+.+.|.+|++||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 36789999999999999999774
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=85.92 E-value=0.15 Score=31.73 Aligned_cols=31 Identities=10% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCCCCcCHHHHHHHHHCHHHHHHHHHHHHHH
Q 033815 76 NPNSPANSEAARMFSENKREYNRRVREIVEQ 106 (111)
Q Consensus 76 ~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~ 106 (111)
....|.+.++|++|+++++.|.+.|+.|+.-
T Consensus 22 ~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~ 52 (108)
T 2cwb_A 22 TTTEAVDAATAEKVFKQYANDNGVDGEWTYD 52 (108)
T ss_dssp -------------------------------
T ss_pred ccCCchhHHHHHHHHhchhcccccccccccc
Confidence 4467999999999999999999999999843
No 65
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=58.46 E-value=10 Score=29.61 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=24.9
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTAD 111 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 111 (111)
-+|+..+..+|++.|.++|++...++.+.|
T Consensus 277 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 306 (552)
T 2fkn_A 277 LDEADRLRQDTPELYVRLAKQSMKKHVEAM 306 (552)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 467777888899999999999998877654
No 66
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=58.09 E-value=10 Score=29.54 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=24.9
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTAD 111 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 111 (111)
-+|+..+..+|++.|.++|++...++.+.|
T Consensus 276 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 305 (551)
T 1x87_A 276 LDEAAELRARDPKQYIARAKQSIAAHVRAM 305 (551)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 467777888899999999999998877654
No 67
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=57.83 E-value=10 Score=29.55 Aligned_cols=30 Identities=3% Similarity=-0.117 Sum_probs=25.0
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 033815 82 NSEAARMFSENKREYNRRVREIVEQSWTAD 111 (111)
Q Consensus 82 n~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 111 (111)
-+|+..+..+|++.|.++|++...++.+.|
T Consensus 281 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv~Am 310 (557)
T 1uwk_A 281 WEQYRDRAQTEPAAVVKAAKQSMAVHVQAM 310 (557)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 467777888899999999999998877654
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.40 E-value=31 Score=23.49 Aligned_cols=25 Identities=12% Similarity=0.361 Sum_probs=21.0
Q ss_pred CCCEEEEEEEeCCCCCC-----CCCcceee
Q 033815 8 PSGTFKLTLQFTEDYPN-----KPPTVRFV 32 (111)
Q Consensus 8 ~gg~f~~~i~~p~~YP~-----~pP~i~f~ 32 (111)
+.|.|.|+-..|--||. .||-|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 57999999999999998 67777665
No 69
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=31.56 E-value=46 Score=20.59 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=19.6
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHHh
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQSL 71 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 71 (111)
||++|+|-.......+....++.+++..|++|
T Consensus 125 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 125 IDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 67888886544434444444677777777654
No 70
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=30.17 E-value=34 Score=21.26 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=19.7
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHHhh
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQSLL 72 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll 72 (111)
||++|+|-............+..+++..|+.++
T Consensus 139 iD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 139 IDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp ECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred EcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 467888876544333333445677777777653
No 71
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=29.09 E-value=79 Score=17.61 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=25.3
Q ss_pred CCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 033815 79 SPANSEAARMFSENKREYNRRVREIVEQSWTA 110 (111)
Q Consensus 79 ~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 110 (111)
+.++.+++....++-+...+.+-+.+.+++.+
T Consensus 22 ~~lsddaa~~LA~dvEyr~~eI~qeA~kfmrH 53 (70)
T 1taf_B 22 GSLSDDAAKELAEDVSIKLKRIVQDAAKFMNH 53 (70)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35889999999998888888887777776654
No 72
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=29.02 E-value=65 Score=17.50 Aligned_cols=20 Identities=10% Similarity=0.273 Sum_probs=17.8
Q ss_pred cCHHHHHHHHHCHHHHHHHH
Q 033815 81 ANSEAARMFSENKREYNRRV 100 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~ 100 (111)
.|++.+.+..+|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68999999999999998865
No 73
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=26.55 E-value=53 Score=20.12 Aligned_cols=33 Identities=6% Similarity=0.116 Sum_probs=20.5
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHHhh
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQSLL 72 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll 72 (111)
||++|+|-.......+....++.+++..|..++
T Consensus 134 id~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 134 LDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp ECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred EcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 467888866544333444445677777777665
No 74
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=26.16 E-value=75 Score=19.81 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=19.8
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHHhh
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQSLL 72 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll 72 (111)
||++|+|-.........-.-++.++|..|+.+.
T Consensus 127 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 127 VKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp ECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 577888865433333322335778887777664
No 75
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=25.82 E-value=66 Score=18.15 Aligned_cols=21 Identities=10% Similarity=0.265 Sum_probs=18.8
Q ss_pred cCHHHHHHHHHCHHHHHHHHH
Q 033815 81 ANSEAARMFSENKREYNRRVR 101 (111)
Q Consensus 81 ~n~~~~~~~~~~~~~f~~~~~ 101 (111)
.|++.+.+...|+++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 789999999999999998763
No 76
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=25.71 E-value=55 Score=22.29 Aligned_cols=37 Identities=14% Similarity=-0.024 Sum_probs=23.5
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHHhhcCCC
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 76 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~ 76 (111)
||++|.|-...+.......-+..++|..|+.+....-
T Consensus 143 ID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~ 179 (224)
T 3keb_A 143 ADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAM 179 (224)
T ss_dssp ECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC-
T ss_pred EcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhccc
Confidence 5678888764444444444567888888887765433
No 77
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=25.56 E-value=33 Score=15.07 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=7.9
Q ss_pred CCCCcceeecccccc
Q 033815 24 NKPPTVRFVSRMFHP 38 (111)
Q Consensus 24 ~~pP~i~f~t~i~Hp 38 (111)
...|.-.|..+.|||
T Consensus 5 mtlpenyfserpyhp 19 (26)
T 2jrw_A 5 MTLPENYFSERPYHP 19 (26)
T ss_dssp CCCSSSSCCSSSCCS
T ss_pred cccchhhcccCCCCC
Confidence 334444455556665
No 78
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=25.53 E-value=38 Score=18.16 Aligned_cols=11 Identities=27% Similarity=0.712 Sum_probs=8.6
Q ss_pred EEEEeCCCCCC
Q 033815 14 LTLQFTEDYPN 24 (111)
Q Consensus 14 ~~i~~p~~YP~ 24 (111)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 56678999984
No 79
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=25.16 E-value=21 Score=23.99 Aligned_cols=55 Identities=18% Similarity=0.332 Sum_probs=33.8
Q ss_pred CCEEEEEEEeCCCCCCCCCcceeecc--cccceeeCCCcEeecCccccCCCcccHHHHHHHH
Q 033815 9 SGTFKLTLQFTEDYPNKPPTVRFVSR--MFHPNIYADGSICLDILQNQWSPIYDVAAILTSI 68 (111)
Q Consensus 9 gg~f~~~i~~p~~YP~~pP~i~f~t~--i~HpnV~~~G~icl~~l~~~W~p~~~i~~il~~i 68 (111)
|..-.+.|.+.+..|...|.++|.-+ ..+|. +-+++---..|.+..++.+=|..|
T Consensus 123 g~~vsl~i~vdP~~P~~lPe~~FlG~~~~v~~l-----r~~~~~nl~~Wd~~~~i~~NL~~i 179 (186)
T 3zqs_A 123 GNNVSINIEVDPRHPTMLPECFFLGADHVVKPL-----GIKLSRNIHLWDPENSVLQNLKDV 179 (186)
T ss_dssp ETTEEEEEECCTTSTTSCCEEEEEECHHHHHHH-----HHHHHHHGGGCCTTSCHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCcCCceEEECChHHHHHH-----HHHHhhhHhhcCCCCCHHHHHHHH
Confidence 33456788889999999999999844 22222 011100014699988876555443
No 80
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=24.42 E-value=1e+02 Score=17.43 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=26.4
Q ss_pred CCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 033815 76 NPNSPANSEAARMFSENKREYNRRVREIVEQSWT 109 (111)
Q Consensus 76 ~~~~p~n~~~~~~~~~~~~~f~~~~~~~~~~~~~ 109 (111)
++...+++++..+..+=-+.|...|-..+-+-|+
T Consensus 19 dp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 19 DPNEQLDEDVEEMLLQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566788998888888888888888777666655
No 81
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=22.80 E-value=30 Score=19.99 Aligned_cols=11 Identities=55% Similarity=1.153 Sum_probs=9.2
Q ss_pred CCCCCCCccee
Q 033815 21 DYPNKPPTVRF 31 (111)
Q Consensus 21 ~YP~~pP~i~f 31 (111)
.||..||+|..
T Consensus 70 t~Pn~Pp~V~~ 80 (84)
T 1f53_A 70 TYPNRPPKVNS 80 (84)
T ss_dssp CCSSSCCCCCB
T ss_pred ecCCCCCcccE
Confidence 68999999865
No 82
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=21.21 E-value=43 Score=23.31 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=21.0
Q ss_pred CCCEEEEEEEeCCCCC-------CCCCcceee
Q 033815 8 PSGTFKLTLQFTEDYP-------NKPPTVRFV 32 (111)
Q Consensus 8 ~gg~f~~~i~~p~~YP-------~~pP~i~f~ 32 (111)
+.|.|.|+-.+|--|| +.||-|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 5799999999999998 467777765
No 83
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=21.04 E-value=9.1 Score=24.60 Aligned_cols=56 Identities=14% Similarity=0.254 Sum_probs=29.8
Q ss_pred ccceeeCCCcEeecCccccCCCccc--HHHHHHHHHHhhcCCCCCCC--cCHHHHHHHHH
Q 033815 36 FHPNIYADGSICLDILQNQWSPIYD--VAAILTSIQSLLCDPNPNSP--ANSEAARMFSE 91 (111)
Q Consensus 36 ~HpnV~~~G~icl~~l~~~W~p~~~--i~~il~~i~~ll~~p~~~~p--~n~~~~~~~~~ 91 (111)
|.-+++..|++-+--....|+|..| +..-|..-..+|.....++| .|+.-++.|.+
T Consensus 67 W~v~l~~pGkvtitgtsQ~WTPDLT~LMTRQlLeP~~~Fwr~~~~~~~~c~EADaqEFGE 126 (162)
T 1f35_A 67 WNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGE 126 (162)
T ss_dssp EEEEESSSEEEEEEEBCTTCCTTTCCCBGGGBCSSCEEEEECTTCCCEEECHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEeeccccCcchHHHHHhcccchhhhhhhcccCCcccchhhhHHHHHH
Confidence 3334456788877666677999765 32222222233333334455 55555555543
No 84
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=20.76 E-value=98 Score=18.89 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=19.0
Q ss_pred eeCCCcEeecCccccCCCcccHHHHHHHHHH
Q 033815 40 IYADGSICLDILQNQWSPIYDVAAILTSIQS 70 (111)
Q Consensus 40 V~~~G~icl~~l~~~W~p~~~i~~il~~i~~ 70 (111)
||++|+|-...........-++.+++..|+.
T Consensus 132 iD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 132 LDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp ECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred EcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 4678988665544333334456777777664
No 85
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=20.33 E-value=46 Score=24.12 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=14.7
Q ss_pred CCCEEEEEEEeCCCCC
Q 033815 8 PSGTFKLTLQFTEDYP 23 (111)
Q Consensus 8 ~gg~f~~~i~~p~~YP 23 (111)
+.|.|.|+-..|--||
T Consensus 187 ~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYG 202 (312)
T ss_dssp TTSEEEEEEECCCCEE
T ss_pred CCceEEEEEECcCccc
Confidence 5799999999999998
Done!