Query 033818
Match_columns 111
No_of_seqs 103 out of 1128
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 06:38:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033818.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033818hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03185 GST_C_Tau GST_C family 99.7 2.1E-17 4.6E-22 102.5 10.1 96 6-102 30-125 (126)
2 cd03184 GST_C_Omega GST_C fami 99.7 1.6E-17 3.4E-22 103.4 7.1 96 6-103 27-124 (124)
3 KOG0406 Glutathione S-transfer 99.7 3.3E-16 7.2E-21 106.0 10.5 103 5-108 123-227 (231)
4 cd03201 GST_C_DHAR GST_C famil 99.7 1.5E-16 3.2E-21 99.0 8.1 89 10-101 29-119 (121)
5 cd03190 GST_C_ECM4_like GST_C 99.7 1.2E-16 2.6E-21 101.8 7.8 102 3-105 29-131 (142)
6 cd03198 GST_C_CLIC GST_C famil 99.7 6.8E-16 1.5E-20 97.4 9.2 94 5-101 23-133 (134)
7 cd03203 GST_C_Lambda GST_C fam 99.6 1.1E-15 2.3E-20 94.8 7.8 83 15-101 34-120 (120)
8 TIGR00862 O-ClC intracellular 99.6 5.4E-15 1.2E-19 101.3 10.6 94 7-103 119-231 (236)
9 cd03186 GST_C_SspA GST_N famil 99.6 8.5E-15 1.8E-19 88.6 8.2 77 6-89 30-106 (107)
10 PF00043 GST_C: Glutathione S- 99.6 6.2E-15 1.3E-19 87.2 7.4 73 6-84 23-95 (95)
11 cd03196 GST_C_5 GST_C family, 99.6 1.8E-14 3.9E-19 88.7 7.6 77 8-89 38-114 (115)
12 cd03188 GST_C_Beta GST_C famil 99.6 1.5E-14 3.3E-19 87.9 6.9 75 8-90 40-114 (114)
13 cd03187 GST_C_Phi GST_C family 99.5 3.8E-14 8.3E-19 86.7 7.6 79 6-90 40-118 (118)
14 cd03207 GST_C_8 GST_C family, 99.5 2.4E-14 5.3E-19 86.0 6.6 75 8-91 27-101 (103)
15 cd03209 GST_C_Mu GST_C family, 99.5 4.8E-14 1E-18 87.3 7.4 79 8-93 32-110 (121)
16 cd03178 GST_C_Ure2p_like GST_C 99.5 5.3E-14 1.2E-18 85.6 6.5 78 6-90 35-112 (113)
17 cd03191 GST_C_Zeta GST_C famil 99.5 1.7E-13 3.7E-18 84.5 8.0 73 12-92 45-119 (121)
18 PRK09481 sspA stringent starva 99.5 2.3E-13 4.9E-18 91.5 9.1 84 7-96 123-206 (211)
19 cd03183 GST_C_Theta GST_C fami 99.5 1.8E-13 3.8E-18 85.0 8.0 78 6-90 40-120 (126)
20 cd03210 GST_C_Pi GST_C family, 99.5 1.4E-13 3E-18 85.8 6.6 78 7-91 31-111 (126)
21 PF13410 GST_C_2: Glutathione 99.5 1.6E-13 3.6E-18 76.9 6.2 68 7-79 2-69 (69)
22 cd03182 GST_C_GTT2_like GST_C 99.5 2.4E-13 5.3E-18 83.2 7.4 74 6-86 44-117 (117)
23 cd03180 GST_C_2 GST_C family, 99.5 3.7E-13 7.9E-18 81.3 7.6 70 9-86 41-110 (110)
24 cd03181 GST_C_EFB1gamma GST_C 99.5 1.7E-13 3.6E-18 84.6 6.2 83 6-93 35-117 (123)
25 cd03204 GST_C_GDAP1 GST_C fami 99.5 3.4E-13 7.3E-18 82.7 7.3 76 6-86 24-111 (111)
26 cd03189 GST_C_GTT1_like GST_C 99.5 3.4E-13 7.4E-18 82.8 7.2 69 8-84 51-119 (119)
27 cd03177 GST_C_Delta_Epsilon GS 99.4 3.4E-13 7.3E-18 83.0 6.8 75 9-90 36-110 (118)
28 cd03206 GST_C_7 GST_C family, 99.4 6.5E-13 1.4E-17 79.5 6.6 71 8-86 30-100 (100)
29 PLN02817 glutathione dehydroge 99.4 1.6E-12 3.4E-17 90.6 9.1 86 13-101 173-260 (265)
30 cd03208 GST_C_Alpha GST_C fami 99.4 9.8E-13 2.1E-17 83.3 6.7 70 15-91 43-114 (137)
31 PRK13972 GSH-dependent disulfi 99.4 9.3E-13 2E-17 88.7 6.6 75 8-90 129-203 (215)
32 PLN02378 glutathione S-transfe 99.4 2.1E-12 4.4E-17 87.1 8.0 84 12-98 119-205 (213)
33 PRK10542 glutathionine S-trans 99.4 1.3E-12 2.9E-17 86.8 6.7 73 10-90 123-195 (201)
34 TIGR01262 maiA maleylacetoacet 99.4 2.2E-12 4.7E-17 86.3 7.7 73 12-92 130-204 (210)
35 PLN02473 glutathione S-transfe 99.4 1.4E-12 3E-17 87.6 6.3 77 9-90 133-209 (214)
36 PLN02395 glutathione S-transfe 99.4 1.8E-12 3.9E-17 87.0 6.9 77 9-90 132-208 (215)
37 PRK10357 putative glutathione 99.4 3.9E-12 8.5E-17 84.7 8.1 79 9-93 123-201 (202)
38 PRK11752 putative S-transferas 99.4 2.4E-12 5.2E-17 89.5 6.9 81 10-91 177-257 (264)
39 cd03202 GST_C_etherase_LigE GS 99.3 7.8E-12 1.7E-16 77.9 7.0 68 9-82 56-123 (124)
40 cd03195 GST_C_4 GST_C family, 99.3 6.5E-12 1.4E-16 77.1 6.4 72 8-90 39-111 (114)
41 PTZ00057 glutathione s-transfe 99.3 3.4E-12 7.4E-17 85.5 5.3 73 11-90 123-197 (205)
42 cd03194 GST_C_3 GST_C family, 99.3 1.6E-11 3.4E-16 75.5 7.7 68 12-90 42-112 (114)
43 cd03179 GST_C_1 GST_C family, 99.3 9.9E-12 2.1E-16 74.5 5.9 68 6-81 38-105 (105)
44 cd00299 GST_C_family Glutathio 99.3 2.6E-11 5.7E-16 71.4 7.2 71 5-80 30-100 (100)
45 cd03193 GST_C_Metaxin GST_C fa 99.3 2E-11 4.3E-16 71.5 6.0 71 8-81 16-88 (88)
46 COG0625 Gst Glutathione S-tran 99.2 1.1E-10 2.4E-15 78.3 7.3 74 6-87 126-199 (211)
47 cd03192 GST_C_Sigma_like GST_C 99.2 6.8E-11 1.5E-15 70.9 5.3 69 6-80 34-104 (104)
48 PRK10387 glutaredoxin 2; Provi 99.1 6.3E-11 1.4E-15 79.2 5.0 67 11-87 142-208 (210)
49 cd03200 GST_C_JTV1 GST_C famil 99.1 1.3E-10 2.8E-15 69.4 5.7 58 14-82 38-95 (96)
50 PF14497 GST_C_3: Glutathione 99.1 2.3E-10 4.9E-15 68.4 5.0 66 8-82 32-99 (99)
51 cd03205 GST_C_6 GST_C family, 99.1 6.6E-10 1.4E-14 66.2 6.4 67 6-80 32-98 (98)
52 PRK15113 glutathione S-transfe 99.1 4.3E-10 9.4E-15 75.7 6.0 73 10-93 136-209 (214)
53 TIGR02182 GRXB Glutaredoxin, G 98.9 9.5E-10 2.1E-14 74.0 3.6 67 10-87 140-207 (209)
54 cd03197 GST_C_mPGES2 GST_C fam 98.9 5.3E-09 1.2E-13 66.9 6.2 67 11-82 79-145 (149)
55 cd03211 GST_C_Metaxin2 GST_C f 98.9 1.1E-08 2.5E-13 63.9 7.0 72 8-81 54-126 (126)
56 cd03212 GST_C_Metaxin1_3 GST_C 98.9 8.5E-09 1.8E-13 65.4 6.2 73 8-82 61-134 (137)
57 KOG4420 Uncharacterized conser 98.8 3.2E-08 6.9E-13 68.2 8.5 85 8-97 202-292 (325)
58 KOG1422 Intracellular Cl- chan 98.8 1.7E-08 3.7E-13 67.4 6.9 86 13-101 125-214 (221)
59 KOG0867 Glutathione S-transfer 98.8 3E-08 6.4E-13 67.7 7.3 81 5-90 127-207 (226)
60 PLN02907 glutamate-tRNA ligase 98.7 4.4E-08 9.5E-13 76.4 5.9 66 15-85 94-159 (722)
61 COG0435 ECM4 Predicted glutath 98.7 1.2E-08 2.5E-13 70.9 2.1 86 2-90 196-284 (324)
62 KOG1695 Glutathione S-transfer 98.6 1E-07 2.2E-12 64.2 5.3 72 13-90 125-198 (206)
63 KOG0868 Glutathione S-transfer 98.5 2E-07 4.4E-12 61.1 5.3 76 9-92 130-207 (217)
64 KOG2903 Predicted glutathione 98.4 1.4E-07 3.1E-12 65.1 1.3 87 2-90 194-286 (319)
65 PF14834 GST_C_4: Glutathione 97.9 9E-05 2E-09 45.4 6.3 69 11-90 43-112 (117)
66 KOG4244 Failed axon connection 97.4 7.8E-05 1.7E-09 51.8 1.6 69 12-83 204-273 (281)
67 PF04399 Glutaredoxin2_C: Glut 97.0 0.0031 6.7E-08 39.8 5.5 66 10-86 58-124 (132)
68 KOG3029 Glutathione S-transfer 97.0 0.0014 3E-08 46.3 4.2 64 13-82 290-354 (370)
69 KOG3027 Mitochondrial outer me 96.6 0.0026 5.6E-08 43.1 3.4 72 8-82 174-247 (257)
70 cd03199 GST_C_GRX2 GST_C famil 96.5 0.012 2.6E-07 36.9 5.8 64 12-86 61-125 (128)
71 KOG3028 Translocase of outer m 96.0 0.012 2.6E-07 42.0 4.0 72 9-82 161-233 (313)
72 PF11801 Tom37_C: Tom37 C-term 91.6 0.5 1.1E-05 31.0 4.6 36 16-52 113-152 (168)
73 COG2999 GrxB Glutaredoxin 2 [P 85.8 2 4.3E-05 28.8 4.2 65 12-87 143-208 (215)
74 KOG1147 Glutamyl-tRNA syntheta 74.3 2.9 6.3E-05 32.6 2.4 36 15-51 92-127 (712)
75 KOG1668 Elongation factor 1 be 67.4 2.3 4.9E-05 29.4 0.5 58 17-86 10-67 (231)
76 cd06891 PX_Vps17p The phosphoi 43.3 22 0.00048 22.7 2.0 17 71-87 112-128 (140)
77 PF07182 DUF1402: Protein of u 39.9 39 0.00085 24.0 2.9 35 31-65 172-206 (303)
78 PF07862 Nif11: Nitrogen fixat 29.0 85 0.0019 15.7 3.6 32 71-102 4-38 (49)
79 PHA02776 E7 protein; Provision 20.9 33 0.00071 20.7 0.0 12 35-46 2-13 (101)
80 PF06992 Phage_lambda_P: Repli 20.5 2.6E+02 0.0056 19.5 4.3 37 70-106 100-136 (233)
81 PF00527 E7: E7 protein, Early 20.2 34 0.00074 20.1 0.0 12 36-47 1-12 (92)
No 1
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.75 E-value=2.1e-17 Score=102.52 Aligned_cols=96 Identities=42% Similarity=0.735 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
++..+...+.+.+.++.+ |+.|++++|++|+++|+|||++++.+.++..+....+.+.++.+.+|++.+|.++|.++|+
T Consensus 30 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 108 (126)
T cd03185 30 GEEREKAKEEALEALKVL-EEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEA 108 (126)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccH
Confidence 345556778899999999 9999988999999999999999999998765433334332234579999999999999999
Q ss_pred hhhcCCCHHHHHHHHHH
Q 033818 86 IEENLPNQDEMLVVFKR 102 (111)
Q Consensus 86 ~~~~~~~~~~~~~~~~~ 102 (111)
++++.+..+.+++++++
T Consensus 109 ~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 109 VKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHhCCCHHHHHHHHHh
Confidence 99999999988887764
No 2
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.73 E-value=1.6e-17 Score=103.38 Aligned_cols=96 Identities=23% Similarity=0.433 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCC--CccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcc
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGE--KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQV 83 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~--~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~ 83 (111)
+++.++..+++.+.+..+ |+.|.+ ++|++|+++|+|||++++++.++.......|. .+..+++|+|.+|+++|.++
T Consensus 27 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~-~~~~~~~p~l~~w~~r~~~~ 104 (124)
T cd03184 27 PSDREEKKAELRSALENL-EEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGY-EFPLDRFPKLKKWMDAMKED 104 (124)
T ss_pred cccchhhHHHHHHHHHHH-HHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccc-cCCcccChHHHHHHHHhccC
Confidence 345667888899999999 999974 89999999999999999998887654322221 12346899999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHH
Q 033818 84 PIIEENLPNQDEMLVVFKRR 103 (111)
Q Consensus 84 p~~~~~~~~~~~~~~~~~~~ 103 (111)
|+++.++++.+.++++++.+
T Consensus 105 p~v~~~~~~~~~~~~~~~~~ 124 (124)
T cd03184 105 PAVQAFYTDTEIHAEFLKSY 124 (124)
T ss_pred hHHHHHhCCHHHHHHHHhcC
Confidence 99999999999999988753
No 3
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=3.3e-16 Score=106.03 Aligned_cols=103 Identities=31% Similarity=0.579 Sum_probs=88.7
Q ss_pred cHHHHHHHHHHHHHHHHHhhhcccC-CCccccCCCCcchHHHHHHHHHH-HHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 5 TGQELQNTAKEALEMLQNVEEHGLG-EKKFFNGDNIGLVDLAFGSIVYW-LQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~l~e~~l~-~~~~~~G~~~s~aDi~l~~~~~~-~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
.++..+.+.+++.+.|+.+ |+.|. +++||+|+++|++||+++|.+.+ ........|.+.+..+++|+|.+|.+||.+
T Consensus 123 ~~e~~~~~~~e~~e~l~~l-E~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~ 201 (231)
T KOG0406|consen 123 GGEEQEAAKEELREALKVL-EEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKE 201 (231)
T ss_pred CchHHHHHHHHHHHHHHHH-HHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhc
Confidence 4577888889999999999 99998 88999999999999999977754 444444455555667899999999999999
Q ss_pred chhhhhcCCCHHHHHHHHHHHHHHHh
Q 033818 83 VPIIEENLPNQDEMLVVFKRRREQLV 108 (111)
Q Consensus 83 ~p~~~~~~~~~~~~~~~~~~~~~~~~ 108 (111)
+|++++++++.++++++++.+++...
T Consensus 202 ~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 202 DEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred ChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998754
No 4
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.69 E-value=1.5e-16 Score=98.98 Aligned_cols=89 Identities=17% Similarity=0.368 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHhhhcccCC-CccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 10 QNTAKEALEMLQNVEEHGLGE-KKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~-~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
++..+.+.+.+..+ |..|.+ ++|++|+++|+|||++++.+.++... ..+.|+.. .+.+|+|.+|++||.+||+++
T Consensus 29 ~~~~~~l~~~l~~L-e~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~l~~w~~rl~~rps~~ 105 (121)
T cd03201 29 DGTEQALLDELEAL-EDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTSVKSYMKALFSRESFV 105 (121)
T ss_pred HHHHHHHHHHHHHH-HHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchHHHHHHHHHHCCchhh
Confidence 55667889999999 999974 79999999999999999988766532 22223322 368999999999999999999
Q ss_pred hcCCCHHHHHHHHH
Q 033818 88 ENLPNQDEMLVVFK 101 (111)
Q Consensus 88 ~~~~~~~~~~~~~~ 101 (111)
++.+..+++++.++
T Consensus 106 ~t~~~~~~~~~~~~ 119 (121)
T cd03201 106 KTKAEKEDVIAGWA 119 (121)
T ss_pred hcCCCHHHHHHHhc
Confidence 99999888877664
No 5
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.69 E-value=1.2e-16 Score=101.76 Aligned_cols=102 Identities=15% Similarity=0.246 Sum_probs=80.4
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCCCCCchHHHHHHHhh
Q 033818 3 RSTGQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVSHKFPRLHAWLETFK 81 (111)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~~~~p~l~~w~~r~~ 81 (111)
.++++..+.....+.+.++.+ |+.|.+++|++|+++|+|||++++.+.++... ....+......++||+|.+|++||.
T Consensus 29 ~~~~~~~~~~~~~l~~~l~~L-E~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 107 (142)
T cd03190 29 ATTQEAYDEAVDELFEALDRL-EELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLY 107 (142)
T ss_pred ccCHHHHHHHHHHHHHHHHHH-HHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHh
Confidence 455667777888999999999 99999899999999999999999888765321 1111101111248999999999999
Q ss_pred cchhhhhcCCCHHHHHHHHHHHHH
Q 033818 82 QVPIIEENLPNQDEMLVVFKRRRE 105 (111)
Q Consensus 82 ~~p~~~~~~~~~~~~~~~~~~~~~ 105 (111)
++|+++++.+....+..|++++++
T Consensus 108 ~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 108 QNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred cCchHhhhcCHHHHHHHHHhhcCC
Confidence 999999999888888999988754
No 6
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.67 E-value=6.8e-16 Score=97.38 Aligned_cols=94 Identities=20% Similarity=0.322 Sum_probs=75.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhhcccCC----------------CccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCC
Q 033818 5 TGQELQNTAKEALEMLQNVEEHGLGE----------------KKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVS 67 (111)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~l~e~~l~~----------------~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~ 67 (111)
+++..+...+.+.+.|+.+ |.+|.+ ++|++|+++|+|||.+++.+.++... ....|..+ +
T Consensus 23 ~~~~~e~~~~~l~~~L~~l-d~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i--~ 99 (134)
T cd03198 23 NPALNENLEKGLLKALKKL-DDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEI--P 99 (134)
T ss_pred ChhhhHHHHHHHHHHHHHH-HHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--c
Confidence 3455566677889999999 999975 78999999999999999998877542 11234432 3
Q ss_pred CCCchHHHHHHHhhcchhhhhcCCCHHHHHHHHH
Q 033818 68 HKFPRLHAWLETFKQVPIIEENLPNQDEMLVVFK 101 (111)
Q Consensus 68 ~~~p~l~~w~~r~~~~p~~~~~~~~~~~~~~~~~ 101 (111)
+++|+|.+|++|+.+||+++.+.+..+.++..++
T Consensus 100 ~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 100 ADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred ccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 6899999999999999999999999888776553
No 7
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.64 E-value=1.1e-15 Score=94.80 Aligned_cols=83 Identities=27% Similarity=0.519 Sum_probs=67.0
Q ss_pred HHHHHHHHhhhcccC---CCccccCCCCcchHHHHHHHHHHHHH-HHHHhCccccCCCCCchHHHHHHHhhcchhhhhcC
Q 033818 15 EALEMLQNVEEHGLG---EKKFFNGDNIGLVDLAFGSIVYWLQV-IEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEENL 90 (111)
Q Consensus 15 ~~~~~l~~l~e~~l~---~~~~~~G~~~s~aDi~l~~~~~~~~~-~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~~ 90 (111)
++.+.++.+ |+.|+ +++|++| ++|+|||+++|++.++.. +....|.+. .+++|+|.+|+++|.++|+++++.
T Consensus 34 ~~~~~l~~L-e~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~ 109 (120)
T cd03203 34 EAAAALDYI-ENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTK 109 (120)
T ss_pred HHHHHHHHH-HHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHc
Confidence 456777888 88876 5899999 999999999999877654 223345433 248999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 033818 91 PNQDEMLVVFK 101 (111)
Q Consensus 91 ~~~~~~~~~~~ 101 (111)
++.++++++++
T Consensus 110 ~~~~~~~~~~~ 120 (120)
T cd03203 110 QDPQELLDLAK 120 (120)
T ss_pred CCHHHHHhhhC
Confidence 99999988753
No 8
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.63 E-value=5.4e-15 Score=101.29 Aligned_cols=94 Identities=18% Similarity=0.323 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccC------------------CCccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCC
Q 033818 7 QELQNTAKEALEMLQNVEEHGLG------------------EKKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVS 67 (111)
Q Consensus 7 ~~~~~~~~~~~~~l~~l~e~~l~------------------~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~ 67 (111)
+..+...+++.+.++.+ +++|. +++||.|+++|+|||.++|.+.++... .++.|+++ .
T Consensus 119 ~~~~~~~~~l~~~l~~L-e~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~ 195 (236)
T TIGR00862 119 EANDNLEKGLLKALKKL-DDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDI--P 195 (236)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCc--c
Confidence 34445556688999999 98885 579999999999999999999988763 34556544 5
Q ss_pred CCCchHHHHHHHhhcchhhhhcCCCHHHHHHHHHHH
Q 033818 68 HKFPRLHAWLETFKQVPIIEENLPNQDEMLVVFKRR 103 (111)
Q Consensus 68 ~~~p~l~~w~~r~~~~p~~~~~~~~~~~~~~~~~~~ 103 (111)
+++|+|.+|++++.++|+|+.+.|+++.++..+..-
T Consensus 196 ~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 196 AEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred ccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 699999999999999999999999999988877654
No 9
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.59 E-value=8.5e-15 Score=88.57 Aligned_cols=77 Identities=19% Similarity=0.364 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
++..+...+.+.+.+..+ |+.|++++|++|+++|++||++++.+.++.. .|... ...+|++.+|.++|.++|+
T Consensus 30 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~rpa 102 (107)
T cd03186 30 KKEAEKARKELRESLLAL-APVFAHKPYFMSEEFSLVDCALAPLLWRLPA----LGIEL--PKQAKPLKDYMERVFARDS 102 (107)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHcCCCcccCCCCcHHHHHHHHHHHHHHH----cCCCC--cccchHHHHHHHHHHCCHH
Confidence 455666788899999999 9999999999999999999999988755432 34332 2379999999999999999
Q ss_pred hhhc
Q 033818 86 IEEN 89 (111)
Q Consensus 86 ~~~~ 89 (111)
++.+
T Consensus 103 ~~~~ 106 (107)
T cd03186 103 FQKS 106 (107)
T ss_pred HHHh
Confidence 9875
No 10
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.59 E-value=6.2e-15 Score=87.22 Aligned_cols=73 Identities=23% Similarity=0.520 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcch
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVP 84 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p 84 (111)
++.++....++.+.++.+ ++.|.+++|++|+++|+||+++++.+.|+... +.... .++||+|.+|.+||.++|
T Consensus 23 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVL-EKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 346677788899999999 99999999999999999999999999987653 32222 268999999999999998
No 11
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=1.8e-14 Score=88.69 Aligned_cols=77 Identities=25% Similarity=0.427 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
+.+...+.+.+.+..+ |+.|++++|++|+++|+|||++++++.++... ....++.+++|+|.+|.+++.++|+++
T Consensus 38 ~~~~~~~~i~~~l~~l-e~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~----~~~~~~~~~~P~L~~w~~r~~~rpa~~ 112 (115)
T cd03196 38 SEEEYRQQAEAFLKDL-EARLQQHSYLLGDKPSLADWAIFPFVRQFAHV----DPKWFDQSPYPRLRRWLNGFLASPLFS 112 (115)
T ss_pred cHHHHHHHHHHHHHHH-HHHHccCCccCCCCccHHHHHHHHHHHHHHHh----hhcccCcccCHHHHHHHHHHHcChHHH
Confidence 4666778899999999 99999889999999999999999887765431 111122358999999999999999998
Q ss_pred hc
Q 033818 88 EN 89 (111)
Q Consensus 88 ~~ 89 (111)
++
T Consensus 113 ~~ 114 (115)
T cd03196 113 KI 114 (115)
T ss_pred hh
Confidence 75
No 12
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.56 E-value=1.5e-14 Score=87.92 Aligned_cols=75 Identities=19% Similarity=0.330 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
..+...+.+.+.++.+ |+.|++++|++|+++|+|||.+++.+.++.. .+ ++.+++|++.+|.++|.++|+++
T Consensus 40 ~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~w~~~~~~~p~~k 111 (114)
T cd03188 40 VKAAARERLAARLAYL-DAQLAGGPYLLGDRFSVADAYLFVVLRWAPG----VG---LDLSDWPNLAAYLARVAARPAVQ 111 (114)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCcchHHHHHHHHHHHHhh----cC---CChhhChHHHHHHHHHHhCHHhH
Confidence 3455667889999999 9999988999999999999999998877643 22 22347999999999999999998
Q ss_pred hcC
Q 033818 88 ENL 90 (111)
Q Consensus 88 ~~~ 90 (111)
+++
T Consensus 112 ~~~ 114 (114)
T cd03188 112 AAL 114 (114)
T ss_pred hhC
Confidence 753
No 13
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.54 E-value=3.8e-14 Score=86.73 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
+...+.....+.+.++.+ |+.|++++|++|+++|+|||++++++.++... +.. ...+++|++.+|.+++.++|+
T Consensus 40 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~-~~~~~~p~l~~~~~~~~~~p~ 113 (118)
T cd03187 40 EAVVEENEEKLKKVLDVY-EARLSKSKYLAGDSFTLADLSHLPYLQYLMAT----PFA-KLFDSRPHVKAWWEDISARPA 113 (118)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHcccCcccCCCCccHHHHHHHHHHHHHHHc----cch-hhhhcCchHHHHHHHHHhCHH
Confidence 344555677899999999 99999899999999999999999888776421 111 113479999999999999999
Q ss_pred hhhcC
Q 033818 86 IEENL 90 (111)
Q Consensus 86 ~~~~~ 90 (111)
+++++
T Consensus 114 ~~~~~ 118 (118)
T cd03187 114 WKKVL 118 (118)
T ss_pred HHhhC
Confidence 98753
No 14
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=2.4e-14 Score=86.01 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
..+...+++.+.++.+ |++|++++|++|+++|+|||++++.+.|+.. .+ . .+.+|+|++|.+++.++|+++
T Consensus 27 ~~~~~~~~~~~~l~~l-e~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~----~~--~--~~~~p~l~~w~~~~~~~p~~~ 97 (103)
T cd03207 27 ARMAGFGSYDDVLAAL-EQALAKGPYLLGERFTAADVLVGSPLGWGLQ----FG--L--LPERPAFDAYIARITDRPAFQ 97 (103)
T ss_pred hhhhhhhhHHHHHHHH-HHHHccCCcccCCccCHHHHHHHHHHHHHHH----cC--C--CCCChHHHHHHHHHHcCHHHH
Confidence 4555677899999999 9999988999999999999999999988753 12 2 247999999999999999999
Q ss_pred hcCC
Q 033818 88 ENLP 91 (111)
Q Consensus 88 ~~~~ 91 (111)
.+..
T Consensus 98 ~~~~ 101 (103)
T cd03207 98 RAAA 101 (103)
T ss_pred HHhc
Confidence 8764
No 15
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.53 E-value=4.8e-14 Score=87.26 Aligned_cols=79 Identities=22% Similarity=0.358 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
..+...+.+...+..+ |++|.+++|++|+++|+||+++++++.|+... +... .+.||+|.+|.+|+.++|+++
T Consensus 32 ~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~----~~~~--~~~~P~l~~~~~rv~~~p~vk 104 (121)
T cd03209 32 LKPDYLAKLPDKLKLF-SDFLGDRPWFAGDKITYVDFLLYEALDQHRIF----EPDC--LDAFPNLKDFLERFEALPKIS 104 (121)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh----Cccc--cccChHHHHHHHHHHHCHHHH
Confidence 3444566788899999 99998889999999999999999888887542 2222 348999999999999999999
Q ss_pred hcCCCH
Q 033818 88 ENLPNQ 93 (111)
Q Consensus 88 ~~~~~~ 93 (111)
+++...
T Consensus 105 ~~~~~~ 110 (121)
T cd03209 105 AYMKSD 110 (121)
T ss_pred HHHhcc
Confidence 976443
No 16
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.51 E-value=5.3e-14 Score=85.62 Aligned_cols=78 Identities=22% Similarity=0.455 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
+...+.....+.+.++.+ |+.|++++|++|+++|++||++++.+.+.... +... .+.+|++.+|.++|.++|+
T Consensus 35 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~ 107 (113)
T cd03178 35 PYAIERYTNEAKRLYGVL-DKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI----GIDD--LDDFPNVKRWLDRIAARPA 107 (113)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHccCCcccCCCCCeeeeeHHHHHHHHHhc----cccc--hhhchHHHHHHHHHhhCHH
Confidence 334556677889999999 99999889999999999999999888876532 2221 3579999999999999999
Q ss_pred hhhcC
Q 033818 86 IEENL 90 (111)
Q Consensus 86 ~~~~~ 90 (111)
++++.
T Consensus 108 ~~~~~ 112 (113)
T cd03178 108 VQRGL 112 (113)
T ss_pred HHHhc
Confidence 99864
No 17
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.50 E-value=1.7e-13 Score=84.51 Aligned_cols=73 Identities=22% Similarity=0.278 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhhhcccC--CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhc
Q 033818 12 TAKEALEMLQNVEEHGLG--EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEEN 89 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~--~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~ 89 (111)
..+.+.+.++.+ |+.|. +++|++|+++|+|||++++.+.|+.. .+. +.+.+|+|.+|++++.++|+++++
T Consensus 45 ~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~~~~ 116 (121)
T cd03191 45 YRHWIARGFAAL-EKLLAQTAGKFCFGDEPTLADICLVPQVYNARR----FGV---DLSPYPTIARINEACLELPAFQAA 116 (121)
T ss_pred HHHHHHHHHHHH-HHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHH----hCC---CcccCcHHHHHHHHHHhChhHHHh
Confidence 445688999999 99997 45899999999999999998887653 232 235899999999999999999998
Q ss_pred CCC
Q 033818 90 LPN 92 (111)
Q Consensus 90 ~~~ 92 (111)
.+.
T Consensus 117 ~~~ 119 (121)
T cd03191 117 HPD 119 (121)
T ss_pred CcC
Confidence 764
No 18
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.49 E-value=2.3e-13 Score=91.53 Aligned_cols=84 Identities=19% Similarity=0.326 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 7 QELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 7 ~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
+..+...+.+.+.+..+ +++|.+++|++|+++|+|||++++.+.++.. .|.+.. .+.+|+|.+|.+|+.++|++
T Consensus 123 ~~~~~~~~~l~~~l~~l-e~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~----~~~~~~-~~~~p~l~~w~~~~~~rp~~ 196 (211)
T PRK09481 123 SEADAARKQLREELLAI-APVFGEKPYFMSEEFSLVDCYLAPLLWRLPV----LGIELS-GPGAKELKGYMTRVFERDSF 196 (211)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhccCCcccCCCccHHHHHHHHHHHHHHh----cCCCCC-CCCChhHHHHHHHHhccHHH
Confidence 44556667788899999 9999989999999999999999988866543 243322 24799999999999999999
Q ss_pred hhcCCCHHHH
Q 033818 87 EENLPNQDEM 96 (111)
Q Consensus 87 ~~~~~~~~~~ 96 (111)
++++.+.+.-
T Consensus 197 ~~~~~~~~~~ 206 (211)
T PRK09481 197 LASLTEAERE 206 (211)
T ss_pred HHHcCHHHHH
Confidence 9988765543
No 19
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.49 E-value=1.8e-13 Score=84.99 Aligned_cols=78 Identities=24% Similarity=0.421 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc--
Q 033818 6 GQELQNTAKEALEMLQNVEEHG-LGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ-- 82 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~-l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~-- 82 (111)
++..+...+.+.+.++.+ |+. +++++|++|+++|+|||++++.+.+... .+.+. .+.+|+|.+|.+++.+
T Consensus 40 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~~ 112 (126)
T cd03183 40 PEKVKKAEENLEESLDLL-ENYFLKDKPFLAGDEISIADLSAVCEIMQPEA----AGYDV--FEGRPKLAAWRKRVKEAG 112 (126)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh----cCCcc--cccCchHHHHHHHHHHhc
Confidence 445556677899999999 987 4567999999999999999988766543 23222 3589999999999999
Q ss_pred chhhhhcC
Q 033818 83 VPIIEENL 90 (111)
Q Consensus 83 ~p~~~~~~ 90 (111)
+|++++..
T Consensus 113 ~p~~~~~~ 120 (126)
T cd03183 113 NPLFDEAH 120 (126)
T ss_pred chhHHHHH
Confidence 99998853
No 20
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.48 E-value=1.4e-13 Score=85.82 Aligned_cols=78 Identities=24% Similarity=0.324 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccC---CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcc
Q 033818 7 QELQNTAKEALEMLQNVEEHGLG---EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQV 83 (111)
Q Consensus 7 ~~~~~~~~~~~~~l~~l~e~~l~---~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~ 83 (111)
..++...+.+.+.+..+ |+.|. +++|++|+++|+||+++++.+.|+... +... .+.+|+|.+|++||.++
T Consensus 31 ~~~~~~~~~~~~~l~~l-e~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~----~~~~--~~~~P~l~~~~~rv~~~ 103 (126)
T cd03210 31 AGKDDYIKDLPEQLKPF-EKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL----APGC--LDAFPLLKAFVERLSAR 103 (126)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh----ChHh--hhcChHHHHHHHHHHhC
Confidence 34556667788999999 99996 358999999999999999988887532 1112 34899999999999999
Q ss_pred hhhhhcCC
Q 033818 84 PIIEENLP 91 (111)
Q Consensus 84 p~~~~~~~ 91 (111)
|+++++++
T Consensus 104 p~v~~~~~ 111 (126)
T cd03210 104 PKLKAYLE 111 (126)
T ss_pred cHHHHHHh
Confidence 99998764
No 21
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.48 E-value=1.6e-13 Score=76.90 Aligned_cols=68 Identities=24% Similarity=0.491 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHH
Q 033818 7 QELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLET 79 (111)
Q Consensus 7 ~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r 79 (111)
..+++..+++.+.++.+ |..|.+++|++|+++|++||.+++.+.++... +......+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~l-e~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~----~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDAL-EDHLADGPFLFGDRPSLADIALAPFLWRLRFV----GPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHTTSSBTTBSS--HHHHHHHHHHHHHHHC----THTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHh----CcCcCccccCHHHHHHHhC
Confidence 45678889999999999 99999999999999999999999999888653 2111113589999999987
No 22
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.47 E-value=2.4e-13 Score=83.17 Aligned_cols=74 Identities=16% Similarity=0.325 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
++..++..+.+.+.++.+ |+.|++++|++|+++|++||++++++.|+.. .+.+. ...+|+|.+|.+++.++|+
T Consensus 44 ~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~p~ 116 (117)
T cd03182 44 PEWGERSKARAADFLAYL-DTRLAGSPYVAGDRFTIADITAFVGLDFAKV----VKLRV--PEELTHLRAWYDRMAARPS 116 (117)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCCcccCCCCCHHHHHHHHHhHHHHh----cCCCC--ccccHHHHHHHHHHHhccC
Confidence 344566778899999999 9999888999999999999999999988654 23322 3489999999999999997
Q ss_pred h
Q 033818 86 I 86 (111)
Q Consensus 86 ~ 86 (111)
+
T Consensus 117 ~ 117 (117)
T cd03182 117 A 117 (117)
T ss_pred C
Confidence 4
No 23
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.46 E-value=3.7e-13 Score=81.32 Aligned_cols=70 Identities=16% Similarity=0.399 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
.+...+.+.+.++.+ |+.|.+++|++|+++|+|||++++++..... .+ ...+++|+|.+|.++|.++|++
T Consensus 41 ~~~~~~~~~~~l~~l-E~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 41 IAASLAAWAKLMAIL-DAQLAGRPYLAGDRFTLADIPLGCSAYRWFE----LP---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHH-HHHhCCCCcccCCCCCHHHHHHHHHHHHHHH----cc---cccccCchHHHHHHHHHhCCCC
Confidence 445677899999999 9999988999999999999999888742221 11 1245899999999999999975
No 24
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.46 E-value=1.7e-13 Score=84.57 Aligned_cols=83 Identities=17% Similarity=0.319 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
+...+...+.+.+.++.+ |+.|.+++|++|+++|++||++++.+.|+... ..+... .+.+|++.+|.+++.++|+
T Consensus 35 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~--~~~~~~--~~~~p~l~~w~~~~~~~p~ 109 (123)
T cd03181 35 KKSVEAALEELDRVLGVL-EERLLKRTYLVGERLTLADIFVAGALLLGFTY--VFDKEW--RAKYPNVTRWFNTVVNQPI 109 (123)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHccCceeccCCccHHHHHHHHHHHHHHHH--HcCHHH--HHhChHHHHHHHHHHcCHH
Confidence 445666778899999999 99999889999999999999999988886431 111111 2479999999999999999
Q ss_pred hhhcCCCH
Q 033818 86 IEENLPNQ 93 (111)
Q Consensus 86 ~~~~~~~~ 93 (111)
++++.++.
T Consensus 110 ~~~~~~~~ 117 (123)
T cd03181 110 FKAVFGEV 117 (123)
T ss_pred HHHHcCCC
Confidence 99987543
No 25
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.46 E-value=3.4e-13 Score=82.68 Aligned_cols=76 Identities=25% Similarity=0.349 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCC----------ccccCCCCcchHHHHHHHHHHHHHHHHHhCcccc--CCCCCchH
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEK----------KFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIF--VSHKFPRL 73 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~----------~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~--~~~~~p~l 73 (111)
.+-.+....++...+..+ |++|.++ +|++|+++|+|||++++.+.|+... +.... ....||+|
T Consensus 24 ~~~i~~~~~~l~~~l~~L-E~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l 98 (111)
T cd03204 24 VEYLKKILDELEMVLDQV-EQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNL 98 (111)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHH
Confidence 345566778899999999 9999754 5999999999999999999887542 22110 02479999
Q ss_pred HHHHHHhhcchhh
Q 033818 74 HAWLETFKQVPII 86 (111)
Q Consensus 74 ~~w~~r~~~~p~~ 86 (111)
.+|++||.+||++
T Consensus 99 ~~w~~rv~aRpsf 111 (111)
T cd03204 99 EAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999975
No 26
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.46 E-value=3.4e-13 Score=82.80 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcch
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVP 84 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p 84 (111)
..+.....+.+.++.+ |+.|++++|++|+++|+|||++++.+.|+.. .+. ..+.+|+|.+|++++.++|
T Consensus 51 ~~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 51 LAGFINPELKKHLDFL-EDRLAKKGYFVGDKLTAADIMMSFPLEAALA----RGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHhHHHHHHHHHH-HHHHccCCCCCCCCCCHHHHHHHHHHHHHHH----cCc---ccccCchHHHHHHHHhcCC
Confidence 3344556789999999 9999989999999999999999988888653 222 2458999999999999986
No 27
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.45 E-value=3.4e-13 Score=82.97 Aligned_cols=75 Identities=27% Similarity=0.429 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
.+...+++.+.++.+ |+.|.+++|++|+++|++|+++++++.|+... .+ ++...+|+|.+|.++|.++|++++
T Consensus 36 ~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~---~~~~~~p~l~~w~~~~~~~p~~~~ 108 (118)
T cd03177 36 PEEKLDKLEEALDFL-ETFLEGSDYVAGDQLTIADLSLVATVSTLEAL---LP---LDLSKYPNVRAWLERLKALPPYEE 108 (118)
T ss_pred CHHHHHHHHHHHHHH-HHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh---cC---CChhhCchHHHHHHHHHcccchHH
Confidence 445667889999999 99998889999999999999999999887531 22 223479999999999999999998
Q ss_pred cC
Q 033818 89 NL 90 (111)
Q Consensus 89 ~~ 90 (111)
..
T Consensus 109 ~~ 110 (118)
T cd03177 109 AN 110 (118)
T ss_pred HH
Confidence 54
No 28
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.42 E-value=6.5e-13 Score=79.51 Aligned_cols=71 Identities=20% Similarity=0.368 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
..+....++.+.++.+ |+.|++++|++|+++|+|||.+++++.+... .+ +..+++|+|.+|.+++.++|++
T Consensus 30 ~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLL-EEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GG---VDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHH-HHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cC---CChhhCcHHHHHHHHHHhCcCC
Confidence 4556778899999999 9999989999999999999999887765432 12 2245899999999999999975
No 29
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.42 E-value=1.6e-12 Score=90.57 Aligned_cols=86 Identities=14% Similarity=0.357 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhhhcccC-CCccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCCCCCchHHHHHHHhhcchhhhhcC
Q 033818 13 AKEALEMLQNVEEHGLG-EKKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVSHKFPRLHAWLETFKQVPIIEENL 90 (111)
Q Consensus 13 ~~~~~~~l~~l~e~~l~-~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~~ 90 (111)
.+.+.+.+..+ |+.|. +++|++|+++|+|||++++.+.++... ..+.++.+ .+++|+|.+|++++.++|+++.+.
T Consensus 173 ~~~l~~~l~~L-E~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~ 249 (265)
T PLN02817 173 EQALLDELTSF-DDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTR 249 (265)
T ss_pred HHHHHHHHHHH-HHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhhcC
Confidence 35677889999 99997 479999999999999999998876532 22223322 358999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 033818 91 PNQDEMLVVFK 101 (111)
Q Consensus 91 ~~~~~~~~~~~ 101 (111)
+..+.+++.++
T Consensus 250 ~~~~~~~~~~~ 260 (265)
T PLN02817 250 ALPEDVIAGWR 260 (265)
T ss_pred CCHHHHHHHhH
Confidence 88877777655
No 30
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.40 E-value=9.8e-13 Score=83.32 Aligned_cols=70 Identities=17% Similarity=0.323 Sum_probs=57.7
Q ss_pred HHHHHHHHhhhcccC--CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhcCC
Q 033818 15 EALEMLQNVEEHGLG--EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEENLP 91 (111)
Q Consensus 15 ~~~~~l~~l~e~~l~--~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~~~ 91 (111)
.+...+..+ |+.|. +++|++|+++|+||+++++.+.|+... +... .+.||+|.+|++|+.++|++++++.
T Consensus 43 ~~~~~l~~l-E~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~----~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVF-EKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL----DPSL--LSDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHH-HHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh----chhh--hccChHHHHHHHHHHcCHHHHHHHh
Confidence 346889999 99997 678999999999999999998887542 1112 3489999999999999999998653
No 31
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.39 E-value=9.3e-13 Score=88.68 Aligned_cols=75 Identities=16% Similarity=0.298 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
..+...+.+.+.+..+ |++|.+++|++|+++|+|||++++.+..... .+ ++.++||+|.+|+++|.++|+++
T Consensus 129 ~~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~---~~~~~~P~l~~w~~r~~~rp~~~ 200 (215)
T PRK13972 129 AIERYQVETQRLYHVL-NKRLENSPWLGGENYSIADIACWPWVNAWTR----QR---IDLAMYPAVKNWHERIRSRPATG 200 (215)
T ss_pred HHHHHHHHHHHHHHHH-HHHhccCccccCCCCCHHHHHHHHHHHHHhh----cC---CcchhCHHHHHHHHHHHhCHHHH
Confidence 3445566788899999 9999988999999999999998876632211 12 22458999999999999999998
Q ss_pred hcC
Q 033818 88 ENL 90 (111)
Q Consensus 88 ~~~ 90 (111)
+++
T Consensus 201 ~~~ 203 (215)
T PRK13972 201 QAL 203 (215)
T ss_pred HHH
Confidence 865
No 32
>PLN02378 glutathione S-transferase DHAR1
Probab=99.39 E-value=2.1e-12 Score=87.13 Aligned_cols=84 Identities=21% Similarity=0.425 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhhhcccC--CCccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 12 TAKEALEMLQNVEEHGLG--EKKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~--~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
..+.+.+.+..+ |++|. +++|++|+++|+|||++++.+.++... ..+.+... .++||+|.+|+++|.++|++++
T Consensus 119 ~~~~~~~~l~~l-e~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~ 195 (213)
T PLN02378 119 SEHALLVELEAL-ENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFEK 195 (213)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCeec
Confidence 345677889999 99997 579999999999999999998776532 11222222 3589999999999999999999
Q ss_pred cCCCHHHHHH
Q 033818 89 NLPNQDEMLV 98 (111)
Q Consensus 89 ~~~~~~~~~~ 98 (111)
+.+.....+.
T Consensus 196 ~~~~~~~~~~ 205 (213)
T PLN02378 196 TKTEEKYVIS 205 (213)
T ss_pred ccCChHHHHH
Confidence 9877766544
No 33
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.38 E-value=1.3e-12 Score=86.79 Aligned_cols=73 Identities=14% Similarity=0.328 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhc
Q 033818 10 QNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEEN 89 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~ 89 (111)
....+.+.+.++.+ |+.|++++|++|+++|+|||++++++.|+.. .+. +.+.+|+|.+|.+++.++|+++++
T Consensus 123 ~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~k~~ 194 (201)
T PRK10542 123 PTVRAQLEKKFQYV-DEALADEQWICGQRFTIADAYLFTVLRWAYA----VKL---NLEGLEHIAAYMQRVAERPAVAAA 194 (201)
T ss_pred HHHHHHHHHHHHHH-HHHhcCCCeeeCCCCcHHhHHHHHHHHHhhc----cCC---CcccchHHHHHHHHHHcCHHHHHH
Confidence 44556788999999 9999988999999999999999988877643 232 235799999999999999999987
Q ss_pred C
Q 033818 90 L 90 (111)
Q Consensus 90 ~ 90 (111)
+
T Consensus 195 ~ 195 (201)
T PRK10542 195 L 195 (201)
T ss_pred H
Confidence 5
No 34
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.38 E-value=2.2e-12 Score=86.31 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhhhcccCC--CccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhc
Q 033818 12 TAKEALEMLQNVEEHGLGE--KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEEN 89 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~~--~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~ 89 (111)
..+.+.+.++.+ |++|.+ ++|++|+++|+|||++++.+.++.. .+ ++.++||+|.+|+++|.++|+++++
T Consensus 130 ~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~----~~---~~~~~~p~l~~~~~~~~~rp~~~~~ 201 (210)
T TIGR01262 130 YQHWISKGFAAL-EALLQPHAGAFCVGDTPTLADLCLVPQVYNAER----FG---VDLTPYPTLRRIAAALAALPAFQRA 201 (210)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHH----cC---CCcccchHHHHHHHHHhcCHHHHHh
Confidence 445688999999 999974 5699999999999999998877643 12 1235899999999999999999998
Q ss_pred CCC
Q 033818 90 LPN 92 (111)
Q Consensus 90 ~~~ 92 (111)
.++
T Consensus 202 ~~~ 204 (210)
T TIGR01262 202 HPE 204 (210)
T ss_pred Ccc
Confidence 754
No 35
>PLN02473 glutathione S-transferase
Probab=99.37 E-value=1.4e-12 Score=87.62 Aligned_cols=77 Identities=14% Similarity=0.267 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
.+...+.+.+.++.+ |+.|++++|++|+++|+|||++++.+.|........ .. .+++|+|.+|.+|+.++|++++
T Consensus 133 ~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~--~~--~~~~P~l~~w~~~~~~~p~~~~ 207 (214)
T PLN02473 133 VEELKVKFDKVLDVY-ENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLS--GL--VTSRENLNRWWNEISARPAWKK 207 (214)
T ss_pred HHHHHHHHHHHHHHH-HHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccH--HH--HhcCHHHHHHHHHHhcChhhHH
Confidence 344556788899999 999998899999999999999999887754311101 11 2489999999999999999998
Q ss_pred cC
Q 033818 89 NL 90 (111)
Q Consensus 89 ~~ 90 (111)
+.
T Consensus 208 ~~ 209 (214)
T PLN02473 208 LM 209 (214)
T ss_pred HH
Confidence 65
No 36
>PLN02395 glutathione S-transferase
Probab=99.37 E-value=1.8e-12 Score=87.03 Aligned_cols=77 Identities=22% Similarity=0.398 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
.+...+.+.+.+..+ |+.|++++|++|+++|+|||++++++.++... .+. ....+.+|+|.+|.+++.++|++++
T Consensus 132 ~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~---~~~-~~~~~~~p~L~~w~~~~~~rp~~k~ 206 (215)
T PLN02395 132 IKESEEKLAKVLDVY-EARLSKSKYLAGDFVSLADLAHLPFTEYLVGP---IGK-AYLIKDRKHVSAWWDDISSRPAWKE 206 (215)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCccccCCCcCHHHHHHHHHHHHHhcc---cch-hhhhccCchHHHHHHHHHcChHHHH
Confidence 445567788999999 99999889999999999999998877665320 010 1113479999999999999999998
Q ss_pred cC
Q 033818 89 NL 90 (111)
Q Consensus 89 ~~ 90 (111)
++
T Consensus 207 ~~ 208 (215)
T PLN02395 207 VL 208 (215)
T ss_pred HH
Confidence 75
No 37
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.36 E-value=3.9e-12 Score=84.70 Aligned_cols=79 Identities=19% Similarity=0.202 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
.+...+.+...++.+ |++|.+++ ++|+++|+|||++++.+.|+.... .+... ..++|++.+|++|+.++|++++
T Consensus 123 ~~~~~~~l~~~l~~l-e~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~~~~~i~~rp~~~~ 196 (202)
T PRK10357 123 LLRQREKINRSLDAL-EGYLVDGT-LKTDTVNLATIAIACAVGYLNFRR--VAPGW--CVDRPHLVKLVENLFQRESFAR 196 (202)
T ss_pred HHHHHHHHHHHHHHH-HHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcc--cCcch--hhcChHHHHHHHHHhcChhhhh
Confidence 345567788999999 99998777 999999999999999988875310 11111 2479999999999999999999
Q ss_pred cCCCH
Q 033818 89 NLPNQ 93 (111)
Q Consensus 89 ~~~~~ 93 (111)
+.|+.
T Consensus 197 ~~~~~ 201 (202)
T PRK10357 197 TEPPK 201 (202)
T ss_pred cCCCC
Confidence 98764
No 38
>PRK11752 putative S-transferase; Provisional
Probab=99.36 E-value=2.4e-12 Score=89.52 Aligned_cols=81 Identities=15% Similarity=0.229 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhc
Q 033818 10 QNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEEN 89 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~ 89 (111)
+....++.+.|+.+ |++|.+++||+|+++|+|||++++++.++.....+.....++.+.||++.+|+++|.++|+++++
T Consensus 177 ~~~~~~~~~~L~~l-e~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~ 255 (264)
T PRK11752 177 NRFTMEAKRQLDVL-DKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRG 255 (264)
T ss_pred HHHHHHHHHHHHHH-HHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHH
Confidence 34455678899999 99999889999999999999998887765421000111112345899999999999999999987
Q ss_pred CC
Q 033818 90 LP 91 (111)
Q Consensus 90 ~~ 91 (111)
..
T Consensus 256 ~~ 257 (264)
T PRK11752 256 RI 257 (264)
T ss_pred Hh
Confidence 54
No 39
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.32 E-value=7.8e-12 Score=77.90 Aligned_cols=68 Identities=12% Similarity=0.194 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
.+...+.+.+.++.+ ++.|++++|++|+++|+||+++++.+.|+... .+... .+++|++.+|.+||.+
T Consensus 56 ~~~~~~~~~~~l~~l-~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPL-RATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHH-HHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhc
Confidence 456677899999999 99999999999999999999999888887541 23222 3589999999999976
No 40
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.32 E-value=6.5e-12 Score=77.13 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHhhhcccC-CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLG-EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~-~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
..+...+++.+.++.+ |..+. +++|++| ++|+||+++++++.|+.. .|.++ . |++.+|.+||.+||++
T Consensus 39 ~~~~~~~~~~~~~~~l-e~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~----~g~~l----~-p~l~ay~~r~~~rPa~ 107 (114)
T cd03195 39 LSEAAQAAAEKLIAVA-EALLPPGAANLFG-EWCIADTDLALMLNRLVL----NGDPV----P-ERLRDYARRQWQRPSV 107 (114)
T ss_pred CCHHHHHHHHHHHHHH-HHHHhcCCCcccC-CccHHHHHHHHHHHHHHH----cCCCC----C-HHHHHHHHHHHCCHHH
Confidence 3456777888899999 99985 5589999 599999999999998865 34332 2 9999999999999999
Q ss_pred hhcC
Q 033818 87 EENL 90 (111)
Q Consensus 87 ~~~~ 90 (111)
++..
T Consensus 108 ~~~~ 111 (114)
T cd03195 108 QAWL 111 (114)
T ss_pred HHHH
Confidence 9865
No 41
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.31 E-value=3.4e-12 Score=85.50 Aligned_cols=73 Identities=23% Similarity=0.230 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhhcccCC--CccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 11 NTAKEALEMLQNVEEHGLGE--KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 11 ~~~~~~~~~l~~l~e~~l~~--~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
...+.+.+.+..+ |+.|++ ++|++|+++|+||+++++++.++... .+ .+.+.||+|.+|.+|+.++|++++
T Consensus 123 ~~~~~~~~~l~~l-e~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~---~~l~~~P~l~~~~~r~~~~P~~k~ 195 (205)
T PTZ00057 123 FLNEELPKWSGYF-ENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK---YP---NSLKNFPLLKAHNEFISNLPNIKN 195 (205)
T ss_pred HHHHHHHHHHHHH-HHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh---Ch---hhhccChhHHHHHHHHHhChHHHH
Confidence 3446678889999 999964 48999999999999999888776421 11 223589999999999999999999
Q ss_pred cC
Q 033818 89 NL 90 (111)
Q Consensus 89 ~~ 90 (111)
++
T Consensus 196 y~ 197 (205)
T PTZ00057 196 YI 197 (205)
T ss_pred HH
Confidence 75
No 42
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=1.6e-11 Score=75.50 Aligned_cols=68 Identities=18% Similarity=0.303 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhhccc---CCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 12 TAKEALEMLQNVEEHGL---GEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l---~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
..+.+.+.+..+ +..+ ++++|++|+ +|+||+++++++.|... .+ ++ ..|+|.+|.+|+.++|++++
T Consensus 42 ~~~~~~~~~~~l-e~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~----~~---~~--~~P~l~~~~~rv~~rPsv~~ 110 (114)
T cd03194 42 VQADIARIEAIW-AECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT----YG---LP--LSPAAQAYVDALLAHPAMQE 110 (114)
T ss_pred HHHHHHHHHHHH-HHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH----cC---CC--CCHHHHHHHHHHHCCHHHHH
Confidence 334444555555 5544 467899999 99999999988888753 23 22 23999999999999999998
Q ss_pred cC
Q 033818 89 NL 90 (111)
Q Consensus 89 ~~ 90 (111)
.+
T Consensus 111 ~~ 112 (114)
T cd03194 111 WI 112 (114)
T ss_pred HH
Confidence 64
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.28 E-value=9.9e-12 Score=74.48 Aligned_cols=68 Identities=22% Similarity=0.401 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFK 81 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~ 81 (111)
++..+...+++.+.++.+ |..|++++|++|+++|+|||++++++.|+.. .+ ++...+|+|.+|.+++.
T Consensus 38 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~g~~~slaDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVL-EAHLAGRDFLVGDALTIADIALAAYTHVADE----GG---FDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHccCccccCCCCCHHHHHHHHHHHhccc----cC---CChHhCccHHHHHHhhC
Confidence 445566778899999999 9999888999999999999999998888643 22 22357999999999874
No 44
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.27 E-value=2.6e-11 Score=71.45 Aligned_cols=71 Identities=24% Similarity=0.556 Sum_probs=57.6
Q ss_pred cHHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHh
Q 033818 5 TGQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETF 80 (111)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~ 80 (111)
.++..+...+.+.+.++.+ ++.|++++|++|+++|+||+++++++.|+.......+ . .+.+|++.+|.++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~l-~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 30 DEAALEEAREELAAALAAL-EKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--h--hccCccHHHHHHhC
Confidence 3556777788899999999 9999989999999999999999999998875321111 1 34799999999885
No 45
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.26 E-value=2e-11 Score=71.49 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccc--cCCCCCchHHHHHHHhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKI--FVSHKFPRLHAWLETFK 81 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~--~~~~~~p~l~~w~~r~~ 81 (111)
.+.+..+++.+.++.+ |+.|++++|++|+++|++||++++.+.++... . .+... ...+++|+|.+|.+|+.
T Consensus 16 ~~~~~~~~~~~~l~~l-e~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~-~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 16 LTREIYSLAKKDLKAL-SDLLGDKKFFFGDKPTSLDATVFGHLASILYA-P-LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-C-CCChHHHHHHHhCcHHHHHHHHhC
Confidence 3445677888999999 99999999999999999999999988776431 0 00000 01247999999999973
No 46
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=1.1e-10 Score=78.34 Aligned_cols=74 Identities=23% Similarity=0.481 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
....+.....+...++.+ +..|.+++|++|+++|+||+.+++.+.++.. .+.. .+.+|++.+|.+|+.++|+
T Consensus 126 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~----~~~~---~~~~p~l~~w~~r~~~rp~ 197 (211)
T COG0625 126 EAALEAARAEIRALLALL-EALLADGPYLAGDRFTIADIALAPLLWRLAL----LGEE---LADYPALKAWYERVLARPA 197 (211)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCCCHHHHHHHHHHHHhhh----cCcc---cccChHHHHHHHHHHcCCc
Confidence 445666778899999999 9999999999999999999999998888543 1221 2579999999999999999
Q ss_pred hh
Q 033818 86 IE 87 (111)
Q Consensus 86 ~~ 87 (111)
++
T Consensus 198 ~~ 199 (211)
T COG0625 198 FR 199 (211)
T ss_pred hh
Confidence 54
No 47
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.16 E-value=6.8e-11 Score=70.94 Aligned_cols=69 Identities=22% Similarity=0.346 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCC--CccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGE--KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETF 80 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~--~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~ 80 (111)
++.+....+.+.+.+..+ ++.|.+ ++|++|+++|+||+++++++.++... +... ..+.+|++.+|.+++
T Consensus 34 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKL-EKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL----DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHH-HHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh----Cchh-hHHhChhHHHHHHhC
Confidence 445556677788999999 999976 89999999999999999999887542 2211 134799999999885
No 48
>PRK10387 glutaredoxin 2; Provisional
Probab=99.15 E-value=6.3e-11 Score=79.20 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhh
Q 033818 11 NTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIE 87 (111)
Q Consensus 11 ~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~ 87 (111)
...+.+.+.++.+ +++|++ +|++|+++|+||+++++.+.|+... .+ ++ .+|+|.+|++||.++|++.
T Consensus 142 ~~~~~~~~~l~~l-e~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~~--~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 142 GLIKEINADLRAL-DPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KG---IE--WPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHH-HHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cC---CC--CCHHHHHHHHHHHHHhCCC
Confidence 4567788999999 999986 9999999999999999988886531 11 22 4699999999999999863
No 49
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.14 E-value=1.3e-10 Score=69.42 Aligned_cols=58 Identities=19% Similarity=0.389 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 14 KEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 14 ~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
+++.+.++.+ |++|.+++|++|+++|+|||++++.+.+. + +..+.+|++.+|.+||.+
T Consensus 38 ~~~~~~l~~l-e~~L~~~~fl~Gd~~tiADi~l~~~l~~~-------~---~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRAL-NSALGRSPWLVGSEFTVADIVSWCALLQT-------G---LASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHH-HHHHcCCCccCCCCCCHHHHHHHHHHHHc-------c---cccccChHHHHHHHHHHh
Confidence 4566788999 99999999999999999999998876542 2 123479999999999975
No 50
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.09 E-value=2.3e-10 Score=68.37 Aligned_cols=66 Identities=26% Similarity=0.381 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCc--cccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~--~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
..+...+++.+.+..+ +++|++.+ |++|+++|+||+++++.+..+. +. .++ +++|+|.+|++||.+
T Consensus 32 ~~~~~~~~~~~~l~~l-~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~------~~-~~~-~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKIL-EKHLAERGGDFLVGDKPTLADIAVFGFLASLR------WA-DFP-KDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHTSSSSSSSSS--HHHHHHHHHHHHHH------CC-HHT-TTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHH-HHHHHcCCCeeecCCCCCHHHHHHHHHHHHHh------hc-ccc-cccHHHHHHHHhhcC
Confidence 4455567788999999 99997554 9999999999999887664332 11 121 589999999999974
No 51
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.07 E-value=6.6e-10 Score=66.23 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHh
Q 033818 6 GQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETF 80 (111)
Q Consensus 6 ~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~ 80 (111)
++..+.....+.+.+..+ |+.|.+++| +++|+|||++++.+.|..... .+.. ..+++|+|.+|.+||
T Consensus 32 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~--~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDAL-EAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLD--WRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcc--hhhhChHHHHHHHhC
Confidence 345566678899999999 999988888 899999999999998875310 1211 135899999999986
No 52
>PRK15113 glutathione S-transferase; Provisional
Probab=99.06 E-value=4.3e-10 Score=75.73 Aligned_cols=73 Identities=15% Similarity=0.092 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhhcccCC-CccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 10 QNTAKEALEMLQNVEEHGLGE-KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~-~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
+...+.+.+.+..+ |++|++ ++|++|+ +|+|||++++++.|+.. .+. +. .|+|.+|.+|+.++|++++
T Consensus 136 ~~~~~~~~~~l~~l-e~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~----~~~---~~--~p~l~~~~~r~~~rp~~~~ 204 (214)
T PRK15113 136 EAGKAAAEKLFAVA-ERLLAPGQPNLFGE-WCIADTDLALMLNRLVL----HGD---EV--PERLADYATFQWQRASVQR 204 (214)
T ss_pred HHHHHHHHHHHHHH-HHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH----cCC---CC--CHHHHHHHHHHhcCHHHHH
Confidence 45667788999999 999974 5799996 99999999998877643 222 11 2999999999999999999
Q ss_pred cCCCH
Q 033818 89 NLPNQ 93 (111)
Q Consensus 89 ~~~~~ 93 (111)
+....
T Consensus 205 ~~~~~ 209 (214)
T PRK15113 205 WLALS 209 (214)
T ss_pred HHHHh
Confidence 76443
No 53
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.92 E-value=9.5e-10 Score=73.99 Aligned_cols=67 Identities=13% Similarity=0.249 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCc-hHHHHHHHhhcchhhh
Q 033818 10 QNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFP-RLHAWLETFKQVPIIE 87 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p-~l~~w~~r~~~~p~~~ 87 (111)
++..+.+.+.++.+ +++|++++|++| ++|+||+++++.+.|+... + .+ ++| +|.+|++||.+++.+.
T Consensus 140 ~~~~~~~~~~l~~l-e~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~----~--~~---~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 140 PGLLEEINADLEEL-DKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV----A--GI---NWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHH-HHHHhCccccCC-CCCHHHHHHHHHhcCeeee----c--CC---CCChHHHHHHHHHHHHhCCC
Confidence 34567788999999 999999999955 6999999999988776431 1 11 367 9999999999998763
No 54
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.90 E-value=5.3e-09 Score=66.95 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 11 NTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 11 ~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
..++.+.+.+...++....+++|++|+++|+||+.+++++..+..+ .++. +..++|++.+|++||.+
T Consensus 79 D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 79 DVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---cccc--chhhCcCHHHHHHHHHH
Confidence 3455566666554244345678999999999999998888766542 2321 34489999999999976
No 55
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.87 E-value=1.1e-08 Score=63.86 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHH-HHHhCccccCCCCCchHHHHHHHhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVI-EDVVGVKIFVSHKFPRLHAWLETFK 81 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~g~~~~~~~~~p~l~~w~~r~~ 81 (111)
..++..+...+.++.+ +..|++++||+||++|.+|+.+++.+.++... ..-.+.... ..+||+|.+|.+||.
T Consensus 54 ~~ee~~~~~~~~l~aL-s~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQAL-SQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhcC
Confidence 3455666778899999 99999999999999999999998887665321 000011111 247999999999973
No 56
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.86 E-value=8.5e-09 Score=65.37 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHH-HHhCccccCCCCCchHHHHHHHhhc
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIE-DVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~-~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
..++..++..+.++.+ ++.|++++||+|+++|.+|+.+++.+..+.... ...+... ....+|+|.+|.+||.+
T Consensus 61 ~~~~~~~~a~~~l~~l-~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLL-SQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHH-HHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 4566677788899999 999999999999999999999987765543200 0000001 13479999999999875
No 57
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.83 E-value=3.2e-08 Score=68.24 Aligned_cols=85 Identities=20% Similarity=0.337 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhhhcccCC----CccccCCCCcchHHHHHHHHHHHHHHHHHhCccc--cCCCCCchHHHHHHHhh
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGE----KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKI--FVSHKFPRLHAWLETFK 81 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~----~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~--~~~~~~p~l~~w~~r~~ 81 (111)
...+...++...|+.. |..|.+ .+|++|+.+|+||+.+++++.++..+ |++. +.-...|+|..|++|+.
T Consensus 202 ~lkkild~l~~~Ld~V-EteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~L----g~e~~yw~~gsrpnle~Yf~rvr 276 (325)
T KOG4420|consen 202 YLKKILDELAMVLDQV-ETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFL----GLEKKYWEDGSRPNLESYFERVR 276 (325)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhhccccceeeccccchHHHHHHHHHHHHHHHc----ccHHHhcccCCCccHHHHHHHHH
Confidence 4455566677777777 777764 78999999999999999999887642 3221 21225799999999999
Q ss_pred cchhhhhcCCCHHHHH
Q 033818 82 QVPIIEENLPNQDEML 97 (111)
Q Consensus 82 ~~p~~~~~~~~~~~~~ 97 (111)
.|+++++++++.-...
T Consensus 277 rR~sf~kvlg~~fnil 292 (325)
T KOG4420|consen 277 RRFSFRKVLGDIFNIL 292 (325)
T ss_pred hhhHHHHhhhhHHHHH
Confidence 9999999987665443
No 58
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.83 E-value=1.7e-08 Score=67.40 Aligned_cols=86 Identities=17% Similarity=0.341 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhhhcccCC---CccccCCCCcchHHHHHHHHHHHHH-HHHHhCccccCCCCCchHHHHHHHhhcchhhhh
Q 033818 13 AKEALEMLQNVEEHGLGE---KKFFNGDNIGLVDLAFGSIVYWLQV-IEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEE 88 (111)
Q Consensus 13 ~~~~~~~l~~l~e~~l~~---~~~~~G~~~s~aDi~l~~~~~~~~~-~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~ 88 (111)
-+.+...+..| +.+|+. ++|+.||++|.+||.+.|=+..+.. ..++.++++ ++.++++.+|++.+-++.++..
T Consensus 125 e~~Ll~~L~~L-d~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~ 201 (221)
T KOG1422|consen 125 EKALLKELEKL-DDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI--PASLTGVWRYLKNAYARDEFTN 201 (221)
T ss_pred HHHHHHHHHHH-HHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC--chhhhHHHHHHHHHHhHHHhhc
Confidence 34567788999 999973 8999999999999999999998876 344566665 5689999999999999999999
Q ss_pred cCCCHHHHHHHHH
Q 033818 89 NLPNQDEMLVVFK 101 (111)
Q Consensus 89 ~~~~~~~~~~~~~ 101 (111)
+-|.+.+++.-+.
T Consensus 202 tcp~d~ei~~~y~ 214 (221)
T KOG1422|consen 202 TCPADQEIILAYA 214 (221)
T ss_pred CCchHHHHHHhhh
Confidence 9988887766544
No 59
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.79 E-value=3e-08 Score=67.69 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=64.8
Q ss_pred cHHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcch
Q 033818 5 TGQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVP 84 (111)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p 84 (111)
+.........++...+..+ |++|.++.|+.|+++|+||+.+.+.+..+.. .. .+ ..+..++|++.+|++++.++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~-e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~-~~-~~--~~~~~~~p~v~~W~~~~~~~P 201 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNL-ERFLKTQVYLAGDQLTLADLSLASTLSQFQG-KF-AT--EKDFEKYPKVARWYERIQKRP 201 (226)
T ss_pred cchhhHHHHHHHHHHHHHH-HHHHccCCcccCCcccHHHHHHhhHHHHHhH-hh-hh--hhhhhhChHHHHHHHHHHhCc
Confidence 3445566778899999999 9999999999999999999999888877632 11 11 123568999999999999999
Q ss_pred hhhhcC
Q 033818 85 IIEENL 90 (111)
Q Consensus 85 ~~~~~~ 90 (111)
+.++..
T Consensus 202 ~~~e~~ 207 (226)
T KOG0867|consen 202 AYEEAN 207 (226)
T ss_pred cHHHHH
Confidence 987754
No 60
>PLN02907 glutamate-tRNA ligase
Probab=98.67 E-value=4.4e-08 Score=76.40 Aligned_cols=66 Identities=18% Similarity=0.209 Sum_probs=51.1
Q ss_pred HHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchh
Q 033818 15 EALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPI 85 (111)
Q Consensus 15 ~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~ 85 (111)
++...++.+ |.+|.+++|++|+++|+|||++++.+..... ...+.. ....||+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~L-E~~L~~rtYLvGd~lTLADIaL~~~L~~~~~--~~~~~~--~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYV-DGYLASRTFLVGYSLTIADIAIWSGLAGSGQ--RWESLR--KSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHH-HHHhccCCeecCCCCCHHHHHHHHHHHhhhh--hhhccc--ccccCHHHHHHHHHHHhCCC
Confidence 456678999 9999989999999999999999887754311 001111 13589999999999999999
No 61
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=1.2e-08 Score=70.86 Aligned_cols=86 Identities=20% Similarity=0.430 Sum_probs=71.6
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHH-HHH--hCccccCCCCCchHHHHHH
Q 033818 2 FRSTGQELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVI-EDV--VGVKIFVSHKFPRLHAWLE 78 (111)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~--~g~~~~~~~~~p~l~~w~~ 78 (111)
|++.++.-++....+-+.|+.+ |..|+++.|++||++|-||+-+++.+.+++.. ... .+...+ .+||+|..|..
T Consensus 196 FA~tq~aYeea~~~lF~~Ld~l-E~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI--~dypnL~~yLr 272 (324)
T COG0435 196 FATTQEAYEEAVKKLFEALDKL-EQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRI--RDYPNLWGYLR 272 (324)
T ss_pred ccchHHHHHHHHHHHHHHHHHH-HHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchh--hcCchHHHHHH
Confidence 5778889999999999999999 99999999999999999999999988877642 110 122223 36999999999
Q ss_pred HhhcchhhhhcC
Q 033818 79 TFKQVPIIEENL 90 (111)
Q Consensus 79 r~~~~p~~~~~~ 90 (111)
.+-+.|++..+.
T Consensus 273 ~LYq~pg~~~T~ 284 (324)
T COG0435 273 DLYQLPGFAETV 284 (324)
T ss_pred HHhcCccccccc
Confidence 999999999875
No 62
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=1e-07 Score=64.24 Aligned_cols=72 Identities=22% Similarity=0.358 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhhcccC--CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhcC
Q 033818 13 AKEALEMLQNVEEHGLG--EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEENL 90 (111)
Q Consensus 13 ~~~~~~~l~~l~e~~l~--~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~~ 90 (111)
.......++.+ ++.|. ++.|++||++|+||++++..+..+... ..... .+.+|+|.++.+++.++|.+++.+
T Consensus 125 ~Pa~~~~~~~~-~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i 198 (206)
T KOG1695|consen 125 LPAKPKYFKIL-EKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKKYL 198 (206)
T ss_pred ccchHHHHHHH-HHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHHHH
Confidence 34556778888 88886 568999999999999998877766541 11222 347899999999999999999865
No 63
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=2e-07 Score=61.13 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHhhhcccC--CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 9 LQNTAKEALEMLQNVEEHGLG--EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~--~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
.......+.+++..+ |+.|. .|.|-+||++|+||+.+.+.+.-...+ .++.+.||.+.+..+.+.+.|+|
T Consensus 130 ~~W~q~~ItkGF~AL-EklL~~~aGkycvGDevtiADl~L~pqv~nA~rf-------~vdl~PYPti~ri~e~l~elpaF 201 (217)
T KOG0868|consen 130 DQWAQHFITKGFTAL-EKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRF-------HVDLTPYPTITRINEELAELPAF 201 (217)
T ss_pred hHHHHHHHHHhHHHH-HHHHHHccCCcccCceeehhhhccchhhhhhhhc-------cccCCcCchHHHHHHHHHhCHHH
Confidence 444555678999999 99995 589999999999999999988776542 14567899999999999999999
Q ss_pred hhcCCC
Q 033818 87 EENLPN 92 (111)
Q Consensus 87 ~~~~~~ 92 (111)
+.+-|+
T Consensus 202 q~ahP~ 207 (217)
T KOG0868|consen 202 QAAHPD 207 (217)
T ss_pred HhcCCC
Confidence 987654
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=1.4e-07 Score=65.06 Aligned_cols=87 Identities=20% Similarity=0.432 Sum_probs=68.4
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhhcccCCCc--cccCCCCcchHHHHHHHHHHHHHH-HHHh--CccccCCCCCchHHHH
Q 033818 2 FRSTGQELQNTAKEALEMLQNVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVI-EDVV--GVKIFVSHKFPRLHAW 76 (111)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~l~e~~l~~~~--~~~G~~~s~aDi~l~~~~~~~~~~-~~~~--g~~~~~~~~~p~l~~w 76 (111)
|+.+++.-+....++-+.|+.+ |..|+++. |++|+++|-|||-|++.+.+++.. .... ....+ .++||+|..|
T Consensus 194 FA~~~e~Ye~~V~~lfe~LDr~-E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l~~~ 271 (319)
T KOG2903|consen 194 FAEKQEAYEEEVNQLFEALDRC-EDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNLHNW 271 (319)
T ss_pred cccccchHHHHHHHHHHHHHHH-HHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHHHHH
Confidence 5677888888889999999999 99998655 899999999999999888776542 1111 11112 4589999999
Q ss_pred HHHhhc-chhhhhcC
Q 033818 77 LETFKQ-VPIIEENL 90 (111)
Q Consensus 77 ~~r~~~-~p~~~~~~ 90 (111)
.+++-. .|++..+.
T Consensus 272 lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 272 LKNIYWNIPGFSSTT 286 (319)
T ss_pred HHHHHhhccchhhcc
Confidence 999977 89998875
No 65
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.86 E-value=9e-05 Score=45.42 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhhcccC-CCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhhhhc
Q 033818 11 NTAKEALEMLQNVEEHGLG-EKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPIIEEN 89 (111)
Q Consensus 11 ~~~~~~~~~l~~l~e~~l~-~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~~~~ 89 (111)
.+.....+.+... ++.+. +++|+.| ..||||..+++++.++.. .|.. ++ +.+..|.++.-++|++++.
T Consensus 43 ~a~~~a~kL~~~a-~~ll~~g~~~LFG-ewsIAD~dlA~ml~Rl~~----~gd~-vP----~~l~~Ya~~qwqrpsVQ~W 111 (117)
T PF14834_consen 43 AAQAAAQKLIAVA-ERLLADGGPNLFG-EWSIADADLALMLNRLVT----YGDP-VP----ERLADYAERQWQRPSVQRW 111 (117)
T ss_dssp HHHHHHHHHHHHH-HHHTTT--SSTTS-S--HHHHHHHHHHHHHHT----TT---------HHHHHHHHHHHT-HHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhccCCCCccc-cchHHHHHHHHHHHHHHH----cCCC-CC----HHHHHHHHHHHCCHHHHHH
Confidence 3445556667777 77776 5789988 799999999999987753 2321 21 5899999999999999986
Q ss_pred C
Q 033818 90 L 90 (111)
Q Consensus 90 ~ 90 (111)
+
T Consensus 112 l 112 (117)
T PF14834_consen 112 L 112 (117)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.40 E-value=7.8e-05 Score=51.76 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHH-hCccccCCCCCchHHHHHHHhhcc
Q 033818 12 TAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDV-VGVKIFVSHKFPRLHAWLETFKQV 83 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~-~g~~~~~~~~~p~l~~w~~r~~~~ 83 (111)
..+.+++-++.+ +..|++.+|+.||++|-+|+.++.-+.-+.- + + .....+-.+++|+|..|.+|+++.
T Consensus 204 i~ell~rDlr~i-~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P-~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 204 IDELLHRDLRAI-SDYLGDKKFLFGDKITPADATVFGQLAQVYY-P-FRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHH-HHHhCCCccccCCCCCcceeeehhhhhheec-c-CCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 445567788889 9999999999999999999987654432111 1 0 001111135899999999998763
No 67
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.97 E-value=0.0031 Score=39.78 Aligned_cols=66 Identities=15% Similarity=0.318 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCC-chHHHHHHHhhcchhh
Q 033818 10 QNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKF-PRLHAWLETFKQVPII 86 (111)
Q Consensus 10 ~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~-p~l~~w~~r~~~~p~~ 86 (111)
++...++...|..+ +..+...... ++++|+-||.+++.++-+... .|. .| |++.+|+++|.+.-.+
T Consensus 58 ~~~i~~l~~~L~~L-e~ll~~~~~~-n~~LS~dDi~lFp~LR~Ltiv---kgi------~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEEL-EPLLASPNAV-NGELSIDDIILFPILRSLTIV---KGI------QWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHH-HHH-SCTTBT-TSS--HHHHHHHHHHHHHCTC---TTS---------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHH-HHHhcccccc-CCCCCHHHHHHHHHHhhhhhc---cCC------cCCHHHHHHHHHHHHHcCC
Confidence 44556777788888 8888744444 449999999999988765431 232 34 6999999999876554
No 68
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=96.97 E-value=0.0014 Score=46.28 Aligned_cols=64 Identities=11% Similarity=0.220 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhhccc-CCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 13 AKEALEMLQNVEEHGL-GEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 13 ~~~~~~~l~~l~e~~l-~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
++++.++.+.. -..+ .+.+|++|+++++||+.++-++..+.++..+.. .+ ....+..|.-+|.+
T Consensus 290 Re~lydA~d~W-vaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd--~~---q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 290 REHLYDAADQW-VAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKD--CL---QNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHH-HHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHH--HH---hcchHHHHHHHHHH
Confidence 44444444444 3334 468999999999999999988888776543322 22 34688999988865
No 69
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.63 E-value=0.0026 Score=43.05 Aligned_cols=72 Identities=15% Similarity=0.272 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHH--HHHHhCccccCCCCCchHHHHHHHhhc
Q 033818 8 ELQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQV--IEDVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 8 ~~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~--~~~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
+.++..+++...++.| ...|+..+||.|+++|-+|..++--+..+.. ++...-.+. ...||+|..+..|+.+
T Consensus 174 ~~DqVie~vdkc~~aL-sa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~--lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 174 TMDQVIEQVDKCCRAL-SAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI--LKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cHHHHHHHHHHHHHHH-HHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH--HHHhHHHHHHHHHHHH
Confidence 3456677788889999 9999999999999999999987544443222 110000001 2478888888888765
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.54 E-value=0.012 Score=36.92 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCC-chHHHHHHHhhcchhh
Q 033818 12 TAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKF-PRLHAWLETFKQVPII 86 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~-p~l~~w~~r~~~~p~~ 86 (111)
...++...|..+ +..+.... ..++.+|+-||.++|.++-+... .|. .+ |++.+|+++|.+.-.|
T Consensus 61 ~i~~l~~~L~~l-~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt~v---kgi------~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 61 YIAALNALLEEL-DPLILSSE-AVNGQLSTDDIILFPILRNLTLV---KGL------VFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHH-HHHHcCcc-ccCCcCCHHHHHHHHHHhhhhhh---cCC------CCCHHHHHHHHHHHHHhCC
Confidence 345566667777 77774333 35668999999999988766542 342 33 6999999999876543
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.96 E-value=0.012 Score=41.95 Aligned_cols=72 Identities=22% Similarity=0.236 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHH-HHhCccccCCCCCchHHHHHHHhhc
Q 033818 9 LQNTAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIE-DVVGVKIFVSHKFPRLHAWLETFKQ 82 (111)
Q Consensus 9 ~~~~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~-~~~g~~~~~~~~~p~l~~w~~r~~~ 82 (111)
.++....-.+++..+ .+.|++..||.||++|-.|..++..+..+...+ ....... -...+++|.++.+++.+
T Consensus 161 e~~i~~~Aska~~~L-S~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~-~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 161 EDQIYKDASKALNLL-STLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQV-HLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHH-HHHhcchHHHHHHHHHH
Confidence 344455667888999 999999999999999999999887776532210 0000000 01237999999999875
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=91.61 E-value=0.5 Score=30.97 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=28.6
Q ss_pred HHHHHHHhhhcccCCC---ccccCCC-CcchHHHHHHHHHH
Q 033818 16 ALEMLQNVEEHGLGEK---KFFNGDN-IGLVDLAFGSIVYW 52 (111)
Q Consensus 16 ~~~~l~~l~e~~l~~~---~~~~G~~-~s~aDi~l~~~~~~ 52 (111)
-.+.+..+ ++.|++. .|+.|+. +|-+||.++..+..
T Consensus 113 a~~~l~~L-~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l 152 (168)
T PF11801_consen 113 AMECLSLL-EELLGEWEEARYFFGDSKPSSLDCLAFAYLAL 152 (168)
T ss_pred HHHHHHHH-HHHHhhccccccccCCCCCCHHHHHHHHHHHH
Confidence 45678888 8888876 8888877 99999998765554
No 73
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=85.82 E-value=2 Score=28.78 Aligned_cols=65 Identities=11% Similarity=0.208 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCc-hHHHHHHHhhcchhhh
Q 033818 12 TAKEALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFP-RLHAWLETFKQVPIIE 87 (111)
Q Consensus 12 ~~~~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p-~l~~w~~r~~~~p~~~ 87 (111)
....+...++.+ ++.+.+.. -..+.+|+=||.++|+++-+... .|. ++| ++..|+.+|.+...+.
T Consensus 143 ~~~~i~~dl~~l-~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~v---~gi------~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 143 YLKRIQADLRAL-DKLIVGPS-AVNGELSEDDILVFPLLRNLTLV---AGI------QWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHH-HHHhcCcc-hhccccchhhhhhhHHhccceec---ccC------CCcHHHHHHHHHHHHhhCcc
Confidence 345566777777 77776544 34457999999999988754321 232 455 8999999998765443
No 74
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=74.28 E-value=2.9 Score=32.65 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhcccCCCccccCCCCcchHHHHHHHHH
Q 033818 15 EALEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVY 51 (111)
Q Consensus 15 ~~~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~ 51 (111)
++...+..+ +..|.-..|++|..+|+||++++..+.
T Consensus 92 ~~s~~~~~l-d~~l~~~t~lvg~sls~Ad~aiw~~l~ 127 (712)
T KOG1147|consen 92 EISSSLSEL-DKFLVLRTFLVGNSLSIADFAIWGALH 127 (712)
T ss_pred HHHHHHHHH-HhhhhHHHHhhccchhHHHHHHHHHHh
Confidence 456677778 888877889999999999999877664
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=67.37 E-value=2.3 Score=29.40 Aligned_cols=58 Identities=16% Similarity=0.272 Sum_probs=41.6
Q ss_pred HHHHHHhhhcccCCCccccCCCCcchHHHHHHHHHHHHHHHHHhCccccCCCCCchHHHHHHHhhcchhh
Q 033818 17 LEMLQNVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIFVSHKFPRLHAWLETFKQVPII 86 (111)
Q Consensus 17 ~~~l~~l~e~~l~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~~~~~~p~l~~w~~r~~~~p~~ 86 (111)
...++.+ +.+|.+.+|..|..++-.|+.++..+. .+. ....+++..+|+..+.+....
T Consensus 10 ~~glk~l-~~sLA~ks~~~g~~~s~edv~vf~al~----------~ep-~s~~~v~~~~w~~~l~a~~~~ 67 (231)
T KOG1668|consen 10 PAGLKKL-NKSLAEKSYIEGYQLSKEDVVVFAALG----------VEP-QSARLVNAERWYSKLEALLRL 67 (231)
T ss_pred hhhhhhh-hHhhhcccCCCCCCcccccceeehhcc----------cCc-chhhhhHHHHHHHHHHHHHHH
Confidence 4677888 999999999999999999998764331 111 133678888888777665443
No 76
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=43.28 E-value=22 Score=22.68 Aligned_cols=17 Identities=24% Similarity=0.557 Sum_probs=14.0
Q ss_pred chHHHHHHHhhcchhhh
Q 033818 71 PRLHAWLETFKQVPIIE 87 (111)
Q Consensus 71 p~l~~w~~r~~~~p~~~ 87 (111)
-.|+.|++|+..+|.+.
T Consensus 112 ~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 112 ANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHhCChhhc
Confidence 56889999999999554
No 77
>PF07182 DUF1402: Protein of unknown function (DUF1402); InterPro: IPR009842 This family consists of several hypothetical bacterial proteins of around 310 residues in length. Members of this family seem to be found exclusively in Agrobacterium, Rhizobium and Brucella species. The function of this family is unknown.
Probab=39.86 E-value=39 Score=24.00 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=22.6
Q ss_pred CccccCCCCcchHHHHHHHHHHHHHHHHHhCcccc
Q 033818 31 KKFFNGDNIGLVDLAFGSIVYWLQVIEDVVGVKIF 65 (111)
Q Consensus 31 ~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~g~~~~ 65 (111)
+||+.|+.+++.-|.=+..+...+......|..-+
T Consensus 172 QPfyAGQTFGLGQinPLTAL~~tD~V~~~Sg~~kL 206 (303)
T PF07182_consen 172 QPFYAGQTFGLGQINPLTALMMTDMVSRVSGYPKL 206 (303)
T ss_pred ccccccccccccccChhHHHHHHHHHHhccCCccC
Confidence 68999999999998755555444443333444333
No 78
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=29.01 E-value=85 Score=15.67 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=23.1
Q ss_pred chHHHHHHHhhcchhhhhc---CCCHHHHHHHHHH
Q 033818 71 PRLHAWLETFKQVPIIEEN---LPNQDEMLVVFKR 102 (111)
Q Consensus 71 p~l~~w~~r~~~~p~~~~~---~~~~~~~~~~~~~ 102 (111)
..+.++++++.+.|.++.- ..+.+.++++.+.
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~lA~~ 38 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKACQNPEEVVALARE 38 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHHH
Confidence 4578889999999988873 2466777766543
No 79
>PHA02776 E7 protein; Provisional
Probab=20.89 E-value=33 Score=20.70 Aligned_cols=12 Identities=25% Similarity=0.493 Sum_probs=10.8
Q ss_pred cCCCCcchHHHH
Q 033818 35 NGDNIGLVDLAF 46 (111)
Q Consensus 35 ~G~~~s~aDi~l 46 (111)
.|.++|+-||++
T Consensus 2 ~G~~pTl~DIvL 13 (101)
T PHA02776 2 HGKHPTLKDIVL 13 (101)
T ss_pred CCCCCcHhHeee
Confidence 589999999997
No 80
>PF06992 Phage_lambda_P: Replication protein P; InterPro: IPR009731 This family consists of several Bacteriophage lambda replication protein P like proteins. The bacteriophage lambda P protein promoters replication of the phage chromosome by recruiting a key component of the cellular replication machinery to the viral origin. Specifically, P protein delivers one or more molecules of Escherichia coli DnaB helicase to a nucleoprotein structure formed by the lambda O initiator at the lambda replication origin [].; GO: 0006270 DNA-dependent DNA replication initiation
Probab=20.50 E-value=2.6e+02 Score=19.55 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=29.4
Q ss_pred CchHHHHHHHhhcchhhhhcCCCHHHHHHHHHHHHHH
Q 033818 70 FPRLHAWLETFKQVPIIEENLPNQDEMLVVFKRRREQ 106 (111)
Q Consensus 70 ~p~l~~w~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~ 106 (111)
+|..-+++.-|...+...--+|+.+++.+.+.++...
T Consensus 100 ~PS~GqFI~WCk~~~~~~lGLP~~del~~~~~~y~~~ 136 (233)
T PF06992_consen 100 WPSPGQFIAWCKPGDYEALGLPSVDELYQRYKRYCRY 136 (233)
T ss_pred CCChhHHHHHHhcchHHhcCCCCHHHHHHHHHHHHHH
Confidence 5888888888888877666788999888887776654
No 81
>PF00527 E7: E7 protein, Early protein; InterPro: IPR000148 This family includes the E7 oncoprotein from various papillomaviruses []. Along with E5 and E6 their activities seem to be especially important for viral oncogenesis. E5 is located at the cell surface and reduces cell gap-gap junction communication. In cervical cancer E5 is expressed in earlier stages of neoplastic transformation of the cervical epithelium during viral infection. The role of E7 is less well understood but it has been shown to impede growth arrest signals in both NIH 3T3 cells and HFKs and that this correlates with elevated cdc25A gene expression. This deregulation of cdc25A is linked to disruption of cell cycle arrest [].; GO: 0003677 DNA binding, 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2F8B_A 2EWL_A 2B9D_A.
Probab=20.24 E-value=34 Score=20.09 Aligned_cols=12 Identities=25% Similarity=0.429 Sum_probs=0.0
Q ss_pred CCCCcchHHHHH
Q 033818 36 GDNIGLVDLAFG 47 (111)
Q Consensus 36 G~~~s~aDi~l~ 47 (111)
|+++|+-||++-
T Consensus 1 G~~ptl~DIvL~ 12 (92)
T PF00527_consen 1 GKEPTLKDIVLE 12 (92)
T ss_dssp ------------
T ss_pred CCCCccccEEee
Confidence 678999999873
Done!