BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033826
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEV++IIFS KG+LYEF+SS
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 EMQKTLERYYRYTEERQIDRNGMERYMQ 88
MQ T++RY R+T++R + E MQ
Sbjct: 61 NMQDTIDRYLRHTKDRVSTKPVSEENMQ 88
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 68/75 (90%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +G+LYEF+S+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 EMQKTLERYYRYTEE 75
QKT+ERY YT+E
Sbjct: 61 STQKTIERYRTYTKE 75
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRLYEF+S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 E-MQKTLERYYRYTEERQIDRNGMERYMQVRPLYLNL 96
+QKT++RY YT++ ++ + QV+ L L
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGL 97
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRLYEF+S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 E-MQKTLERYYRYTEERQIDRNGMERYMQVRPLYLNL 96
+QKT++RY YT++ ++ + QV+ L L
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGL 97
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA++IFS + +LYEFSSS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 61 EMQKTLERYYRYTEE 75
+ T+ERY R +E
Sbjct: 61 SIAATIERYQRRIKE 75
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 60 SEMQKTLERYYR 71
S + KT+ERY +
Sbjct: 61 SSIPKTVERYQK 72
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3
SV=1
Length = 264
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI++K+IEN SRQVTFSKRR G+LKKA+ELSVLCDAEVAVI+FS+ G+L+EFSS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 EMQKTLERYYRYTEERQIDRNGMERYMQVRPLYLNLITFEISLGKRQYL 109
M+KTL RY Y + + Q ++L+ EIS+ + ++L
Sbjct: 61 SMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHL 109
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 65/83 (78%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG++++K+IEN +RQVTFSKRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 EMQKTLERYYRYTEERQIDRNGM 83
+ KTLERY Q N +
Sbjct: 61 GITKTLERYQHCCYNAQDSNNAL 83
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RGK+ +++IEN SRQVTF+KRRNG+LKKAYELS+LCDAEVA+++FS GRLY+F SS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 60 SEMQKTLERYYRY 72
S M KTLERY RY
Sbjct: 61 SNMLKTLERYQRY 73
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 68/80 (85%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG +Q+++IEN +RQVTFSKRRNG+LKKA+E+SVLCDA+VA+I+FS KG+LYEFSS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+ LERY RY+ +ER +
Sbjct: 61 SSMEGILERYQRYSFDERAV 80
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 68/80 (85%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG +Q+++IEN +RQVTFSKRRNG+LKKA+E+SVLCDA+VA+I+FS KG+LYEFSS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+ LERY RY+ +ER +
Sbjct: 61 SSMEGILERYQRYSFDERAV 80
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGK+++K+IEN SRQVTF+KRRNG+LKKAYELS+LCDAEVA+IIFS +GRL+EFSSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 E-MQKTLERY 69
M KTLERY
Sbjct: 61 SCMYKTLERY 70
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGK+++K+IEN SRQVTF+KRRNG+LKKAYELS+LCDAEVA+IIFS +GRL+EFSSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 E-MQKTLERY 69
M KTLERY
Sbjct: 61 SCMYKTLERY 70
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFS-S 59
M RGK+++K+IEN SRQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +GRL+EFS S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 60 SEMQKTLERY 69
S M KTLERY
Sbjct: 61 SCMYKTLERY 70
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFS-S 59
M RGK+++K+IEN SRQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +GRL+EFS S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 60 SEMQKTLERY 69
S M KTLERY
Sbjct: 61 SCMYKTLERY 70
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RGK+Q+K+IEN +RQVTFSKRRNG+LKKA+E+SVLCDAEVA I+FS KG+LYE+++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 60 SEMQKTLERYYRYT 73
S M K LERY RY+
Sbjct: 61 SRMDKILERYERYS 74
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 63/69 (91%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 61 EMQKTLERY 69
++ T+ERY
Sbjct: 61 NIRSTIERY 69
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 62/71 (87%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG+++MK+IEN +RQVTFSKRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 61 EMQKTLERYYR 71
++ T+ERY R
Sbjct: 61 GIESTIERYNR 71
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 62/69 (89%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG++++K+IEN +RQVTFSKRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 EMQKTLERY 69
+ KTLE+Y
Sbjct: 61 GINKTLEKY 69
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 58/69 (84%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI +K+I N TSRQVTFSKRRNG+LKKA EL++LCDAEV VIIFS GRLY+FSSS
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 EMQKTLERY 69
M+ +ERY
Sbjct: 61 SMKSVIERY 69
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 63/69 (91%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60
Query: 61 EMQKTLERY 69
++ T+ERY
Sbjct: 61 SVKSTVERY 69
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SEMQKTLERYYR 71
S M KTLERY +
Sbjct: 61 SSMLKTLERYQK 72
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+I+FS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 60 SEMQKTLERYYRYT 73
S M KTLERY R +
Sbjct: 61 SCMNKTLERYQRCS 74
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG
PE=1 SV=2
Length = 252
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE+S++ +
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSV 78
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 79 KGTIERY 85
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 E-MQKTLERYYRYT 73
+ M +TLERY +++
Sbjct: 61 QSMTRTLERYQKFS 74
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE+S++ +
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSV 78
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 79 KGTIERY 85
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba
GN=AGL9 PE=2 SV=1
Length = 254
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SEMQKTLERY 69
S M +TLERY
Sbjct: 61 SSMIRTLERY 70
>sp|O22456|SEP3_ARATH Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3
PE=1 SV=1
Length = 251
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SEMQKTLERY 69
S M +TLERY
Sbjct: 61 SSMLRTLERY 70
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SEMQKTLERYYRYT 73
S M KTL+RY + +
Sbjct: 61 SNMLKTLDRYQKCS 74
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++ +
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 78
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 79 KATIERY 85
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++ +
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 78
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 79 KATIERY 85
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+++FS +GRLYE++++ +
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSV 78
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 79 KATIERY 85
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 63/72 (87%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI++K+IEN SRQVTFSKRR+G+LKKA ELSVLCDAEVAVI+FS+ G+L+E+SS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 EMQKTLERYYRY 72
M++TL RY +
Sbjct: 61 GMKQTLSRYGNH 72
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 61 E-MQKTLERYYRYT 73
+ M KTLE+Y + +
Sbjct: 61 QSMTKTLEKYQKCS 74
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 61 E-MQKTLERYYRYT 73
+ M KTLE+Y + +
Sbjct: 61 QSMTKTLEKYQKCS 74
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA++IFS +GRLYE++++ +
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSV 77
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 78 RGTIERY 84
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGKI +++I+N TSRQVTFSKRRNG+LKKA ELS+LCDAEV +++FS GRLYEFSS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 EMQKTLERYYRYTEE 75
M+ ++RY EE
Sbjct: 61 NMKTVIDRYTNAKEE 75
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 63/69 (91%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
+ RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
Query: 61 EMQKTLERY 69
++ T+ERY
Sbjct: 77 SVKGTIERY 85
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2
SV=1
Length = 247
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K++EN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+I+FS +G+LYEF S+
Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 60 SEMQKTLERY 69
S M KTLERY
Sbjct: 61 SSMLKTLERY 70
>sp|Q42464|AGL9_SOLLC Agamous-like MADS-box protein AGL9 homolog OS=Solanum
lycopersicum GN=TDR5 PE=2 SV=1
Length = 224
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IE +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SS
Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SEMQKTLERY 69
S M KTLERY
Sbjct: 61 SSMLKTLERY 70
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 62/67 (92%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA++IFS +GRLYE++++ +
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSV 77
Query: 63 QKTLERY 69
+ T+ERY
Sbjct: 78 RGTIERY 84
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG++Q+K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+K LERY RY+ ERQ+
Sbjct: 61 SCMEKILERYERYSYAERQL 80
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG++Q+K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+K LERY RY+ ERQ+
Sbjct: 61 SCMEKILERYERYSYAERQL 80
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 63/67 (94%)
Query: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEM 62
RGKI++K+IEN T+RQVTF KRR+G+LKKAYELSVLCDAEVA+++FS +GRLYE+S++ +
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSV 104
Query: 63 QKTLERY 69
++T+ERY
Sbjct: 105 KETIERY 111
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG++Q+K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+K LERY RY+ ERQ+
Sbjct: 61 SCMEKILERYERYSYAERQL 80
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60
M RGK+++K+IEN +RQVTFSKR++G+LKKAYELSVLCDAEV++IIFS G+LYEFS+
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60
Query: 61 EMQKTLERYYRYTEERQIDRNGMERYMQVR 90
+ +T+ERYYR ++ +D + +E +R
Sbjct: 61 GVGRTIERYYR-CKDNLLDNDTLEDTQGLR 89
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SS 59
M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEV++I+FS +G+LYEF S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60
Query: 60 SEMQKTLERYYRYT 73
S M KTLERY + +
Sbjct: 61 SNMLKTLERYQKCS 74
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RGKI++K+IEN TSRQVTF KRRNG+LKKAYEL++LCDAE+A+I+FS +GRLYEFS+
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 60 SEMQKTLERYYRYT 73
+ + T+ERY + +
Sbjct: 61 NSTRSTIERYKKAS 74
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG++Q+K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 60 SEMQKTLERYYRYT-EERQI 78
S M+K LERY RY+ ERQ+
Sbjct: 61 SCMEKILERYERYSYAERQL 80
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 65/73 (89%), Gaps = 1/73 (1%)
Query: 1 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59
M RG++Q+K+IEN +RQVTFSKRR+G+LKKA+E+SVLCDAEVA++IFS KG+L+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60
Query: 60 SEMQKTLERYYRY 72
S M+K LERY RY
Sbjct: 61 SCMEKILERYDRY 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,311,177
Number of Sequences: 539616
Number of extensions: 1190129
Number of successful extensions: 3571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3354
Number of HSP's gapped (non-prelim): 182
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)