BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033829
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZMM5|ZN706_CHICK Zinc finger protein 706 OS=Gallus gallus GN=ZNF706 PE=4 SV=1
Length = 76
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|Q9D115|ZN706_MOUSE Zinc finger protein 706 OS=Mus musculus GN=Znf706 PE=2 SV=1
Length = 76
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|Q9Y5V0|ZN706_HUMAN Zinc finger protein 706 OS=Homo sapiens GN=ZNF706 PE=1 SV=1
Length = 76
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|Q9JKD9|ZBT32_MOUSE Zinc finger and BTB domain-containing protein 32 OS=Mus musculus
GN=Zbtb32 PE=1 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 43 GHAKYECPLCKVTAPDIKSMQIHHDARHP-KLP 74
G A Y CPLC+ P + SMQ H P +LP
Sbjct: 401 GAAPYRCPLCRAGCPSLASMQAHMRGHSPSRLP 433
>sp|Q5M7B7|OPTN_XENLA Optineurin OS=Xenopus laevis GN=optn PE=2 SV=1
Length = 532
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 47 YECPLCKVTAPDIKSMQIH 65
Y CP C +T PD+ ++QIH
Sbjct: 508 YTCPKCNLTVPDMDTLQIH 526
>sp|A1YF22|ZHX1_GORGO Zinc fingers and homeoboxes protein 1 OS=Gorilla gorilla gorilla
GN=ZHX1 PE=3 SV=1
Length = 873
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A2T7S4|ZHX1_PONPY Zinc fingers and homeoboxes protein 1 OS=Pongo pygmaeus GN=ZHX1
PE=3 SV=1
Length = 873
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A2T771|ZHX1_PANTR Zinc fingers and homeoboxes protein 1 OS=Pan troglodytes GN=ZHX1
PE=3 SV=1
Length = 873
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A1YG99|ZHX1_PANPA Zinc fingers and homeoboxes protein 1 OS=Pan paniscus GN=ZHX1 PE=3
SV=1
Length = 873
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|Q9UKY1|ZHX1_HUMAN Zinc fingers and homeoboxes protein 1 OS=Homo sapiens GN=ZHX1 PE=1
SV=1
Length = 873
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|F7EP40|ZNRF1_XENTR E3 ubiquitin-protein ligase znrf1 OS=Xenopus tropicalis GN=znrf1
PE=3 SV=1
Length = 195
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 28 GGKAGMADRTG---REKGGHAKYECPLC-KVTAPDIKSMQIHHDARHPKLPFDEASLV 81
G +A +AD R G H+ + CP+C K APD M P+L +++ L
Sbjct: 89 GSRASLADTLQIAPRWIGAHSGFRCPICSKSVAPDEMEMHFIMCLSKPRLSYNDDVLT 146
>sp|P70121|ZHX1_MOUSE Zinc fingers and homeoboxes protein 1 OS=Mus musculus GN=Zhx1 PE=1
SV=2
Length = 873
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAES 92
YEC C PD+ H D+ HP + + + + N R DA S
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 118
>sp|Q96JM2|ZN462_HUMAN Zinc finger protein 462 OS=Homo sapiens GN=ZNF462 PE=1 SV=3
Length = 2506
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL 80
Y C C T+P+++S+ H+ HP + + A +
Sbjct: 925 YRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMI 958
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 41 KGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFD 76
K G+ Y C LC T ++ ++IH++ H + FD
Sbjct: 1571 KQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFD 1606
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPK 72
Y+C +C +P++ S+ +H+ +HP+
Sbjct: 1030 YDCDVCSFASPNMHSVLVHYQKKHPE 1055
>sp|Q8R515|ZHX1_RAT Zinc fingers and homeoboxes protein 1 OS=Rattus norvegicus GN=Zhx1
PE=2 SV=1
Length = 873
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAES 92
YEC C PD+ H D+ HP + + + + N R DA S
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 118
>sp|O17582|SPR4_CAEEL Suppressor of presenilin protein 4 OS=Caenorhabditis elegans
GN=spr-4 PE=4 SV=2
Length = 1311
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 25 NRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARH 70
+R K+ +A+ T G K+ C LC +A +KS+ HH+ H
Sbjct: 119 SRYESKSSLANHTKMHLGEKRKFACELCDFSASTLKSL-THHNNIH 163
>sp|Q5R923|OPTN_PONAB Optineurin OS=Pongo abelii GN=OPTN PE=2 SV=1
Length = 527
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 GMADRTGREKGGHAKYECPLCKVTAPDIKSMQIH 65
G DR R++ + CP C PDI ++QIH
Sbjct: 488 GAEDRDWRQQRNIPIHSCPKCGEVLPDIDTLQIH 521
>sp|Q6G159|PYRD_BARQU Dihydroorotate dehydrogenase (quinone) OS=Bartonella quintana
(strain Toulouse) GN=pyrD PE=3 SV=1
Length = 362
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 39 REKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLP-FDEASLVNLHAARV---DAESSK 94
RE+ + P+ APD+ ++ A KL FD + N +R D++ S
Sbjct: 198 REQKKKHGFSVPIFLKIAPDLSEKELDDVAEEMKLSDFDGLIVSNTTLSRQGLRDSKLSG 257
Query: 95 PKPGIRGCPVF 105
K G+ GCP+F
Sbjct: 258 EKGGLSGCPLF 268
>sp|Q95KU9|NEMO_BOVIN NF-kappa-B essential modulator OS=Bos taurus GN=IKBKG PE=1 SV=1
Length = 419
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 46 KYECPLCKVTAPDIKSMQIH 65
K+ CP C+ APDI ++QIH
Sbjct: 394 KFCCPKCQYQAPDIDTLQIH 413
>sp|Q96CV9|OPTN_HUMAN Optineurin OS=Homo sapiens GN=OPTN PE=1 SV=2
Length = 577
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 GMADRTGREKGGHAKYECPLCKVTAPDIKSMQIH 65
G DR R++ + CP C PDI ++QIH
Sbjct: 538 GAEDRDWRQQRNIPIHSCPKCGEVLPDIDTLQIH 571
>sp|Q9D0B1|ZN524_MOUSE Zinc finger protein 524 OS=Mus musculus GN=Znf524 PE=2 SV=1
Length = 321
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 39 REKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKL 73
R G Y+CP C+V + +++ H+ +HP+L
Sbjct: 185 RIHSGERPYQCPSCRVRFTEANTLRRHYKRKHPEL 219
>sp|Q2EI20|REST_DANRE RE1-silencing transcription factor OS=Danio rerio GN=rest PE=2 SV=1
Length = 855
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 46 KYECPLCKVTAPDIKSMQIHHDARHP---KLPFDEASLVNLHAARVDAESSKP 95
++ CP+CK A ++Q H +RHP + D S V L R D + + P
Sbjct: 376 QFLCPVCKYAASKKCNLQYHIKSRHPGCKDISMD-VSKVRLRVKRSDGDDASP 427
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,117,571
Number of Sequences: 539616
Number of extensions: 1628569
Number of successful extensions: 4812
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4739
Number of HSP's gapped (non-prelim): 90
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)