Citrus Sinensis ID: 033837

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Secondary Structure (PSIPRED)
cccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccEEEEEEcccEEccccccccccccccccccccccccccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccEccccccHHEEEcccccccccEEEEcccEEEEccccEEcEEcccHccccHHHHHccccccEEEEEcc
Coil and Loop (DISEMBL)
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKhgvmhhdlnpkkilfvnkkksfslkAIDFglsvffrprEQFNELVGSLYYMALEVLKrnygpevdvwsml
Flexible Loop (DISEMBL)
mklceegelvdrivakghyTERVAAAVMKTIVEVVQVCHKHgvmhhdlnpkkILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKrnygpevdvwSML
Low Complexity Region (SEG)
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Disordered region (IsUnstruct)
*******ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVW***
Disordered Region (DISOPRED)
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Disordered Region (DISEMBL)
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Disordered Region (DISPRO)
**LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
Q38873	535	Calcium-dependent protein	yes	no	0.981	0.201	0.777	4e-47
Q42438	533	Calcium-dependent protein	no	no	0.981	0.202	0.768	1e-46
Q6NLQ6	538	Calcium-dependent protein	no	no	0.981	0.200	0.777	6e-46
Q8W4I7	528	Calcium-dependent protein	no	no	0.981	0.204	0.731	2e-44
P93759	530	Calcium-dependent protein	no	no	0.981	0.203	0.731	3e-44
Q9SSF8	541	Calcium-dependent protein	no	no	0.981	0.199	0.712	1e-41
Q9SIQ7	582	Calcium-dependent protein	no	no	0.981	0.185	0.675	2e-41
Q9M9V8	545	Calcium-dependent protein	no	no	0.981	0.198	0.703	1e-38
Q9FMP5	528	Calcium-dependent protein	no	no	0.990	0.206	0.587	4e-36
Q3E9C0	523	Calcium-dependent protein	no	no	0.990	0.208	0.559	5e-35

>sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1

 Score =  186 bits (472), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTIVEVVQ+CHK GVMH DL P+  LF NKK+
Sbjct: 137 MELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKE 196

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P EQFNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct: 197 TSALKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEIDVWS 244

May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q42438|CDPK8_ARATH Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 135 MELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKE 194

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P E FNE+VGS YYMA EVL+RNYGPEVD+WS
Sbjct: 195 TSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWS 242

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6NLQ6|CDPKW_ARATH Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1

 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 94/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAV KTI+EVVQVCHKHGVMH DL P+  LF NKK+
Sbjct: 141 MELCEGGELFDRIVARGHYTERAAAAVTKTIMEVVQVCHKHGVMHRDLKPENFLFGNKKE 200

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P E+FNE+VGS YYMA EVLKRNYGPEVD+WS
Sbjct: 201 TAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWS 248

May play a role in signal transduction pathways that involve calcium as a second messenger. Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway. Phosphorylates ABA-responsive transcription factor ABF4 in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8W4I7|CDPKD_ARATH Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 93/108 (86%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AA V KTIVEVVQ+CHKHGV+H DL P+  LF NKK+
Sbjct: 132 MELCEGGELFDRIVARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKE 191

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLS+FF+P E+F+E+VGS YYMA EVLKRNYGPE+D+WS
Sbjct: 192 NSPLKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWS 239

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93759|CDPKE_ARATH Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1

 Score =  176 bits (447), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AA+V+KTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 132 MELCEGGELFDRIVARGHYTERAAASVIKTIIEVVQMCHKHGVMHRDLKPENFLFANKKE 191

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + SLKAIDFGLSVFF+P E+FNE+VGS YYMA EVL+R+YG E+D+WS
Sbjct: 192 TASLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLRRSYGQEIDIWS 239

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSF8|CDPKU_ARATH Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1

 Score =  168 bits (425), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/108 (71%), Positives = 90/108 (83%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AA V +TI EVV++CH +GVMH DL P+  LF NKK+
Sbjct: 137 MELCEGGELFDRIVARGHYTERAAATVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKE 196

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSV F+P E+F E+VGS YYMA EVLKRNYGPEVDVWS
Sbjct: 197 NSALKAIDFGLSVLFKPGERFTEIVGSPYYMAPEVLKRNYGPEVDVWS 244

May play a role in signal transduction pathways that involve calcium as a second messenger. May be a positive regulator controlling stress signal transduction. Acts as a calcium sensor involved in the hormone-signaling pathways.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SIQ7|CDPKO_ARATH Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 73/108 (67%), Positives = 92/108 (85%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M++CE GEL DRIV++GHYTER AA+V KTI+EVV+VCH+HGV+H DL P+  LF N  +
Sbjct: 144 MEICEGGELFDRIVSRGHYTERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTE 203

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLS+FF+P ++FNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct: 204 TAQLKAIDFGLSIFFKPAQRFNEIVGSPYYMAPEVLRRNYGPEIDVWS 251

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M9V8|CDPKA_ARATH Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 89/108 (82%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAV +TI EVV +CH +GVMH DL P+  LF NKK+
Sbjct: 141 MELCEGGELFDRIVARGHYTERAAAAVARTIAEVVMMCHSNGVMHRDLKPENFLFANKKE 200

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P ++F E+VGS YYMA EVLKR+YGP VDVWS
Sbjct: 201 NSPLKAIDFGLSVFFKPGDKFTEIVGSPYYMAPEVLKRDYGPGVDVWS 248

May play a role in signal transduction pathways that involve calcium as a second messenger. May be a positive regulator controlling stress signal transduction.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1

 Score =  149 bits (377), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 85/109 (77%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LC  GEL DRI+AKGHY+ER AA++++TIV++V  CH  GV+H DL P+  L +NK +
Sbjct: 151 MELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDE 210

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           +  LKA DFGLSVF++P E F ++VGS YY+A EVLKR YGPE D+WS+
Sbjct: 211 NSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSI 259

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 85/109 (77%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LC  GEL DRI+AKGHY+ER AA++++TIV+++  CH  GV+H DL P+  L ++K +
Sbjct: 146 MELCAGGELFDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDE 205

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           +  LKA DFGLSVF++P E F ++VGS YY+A EVL+R YGPE D+WS+
Sbjct: 206 NSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSI 254

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
18416872	535	calmodulin-domain protein kinase 7 [Arab	0.981	0.201	0.777	2e-45
297811393	535	calmodulin-domain protein kinase 7 [Arab	0.981	0.201	0.777	3e-45
373089193	532	calcium-dependent protein kinase [Morus	0.981	0.203	0.796	5e-45
297812129	533	calcium-dependent protein kinase 19 [Ara	0.981	0.202	0.768	5e-45
15239742	533	calcium-dependent protein kinase 19 [Ara	0.981	0.202	0.768	6e-45
337729587	530	calcium-dependent protein kinase [Hevea	0.981	0.203	0.787	6e-45
110742404	478	calcium-dependent protein kinase [Arabid	0.981	0.225	0.768	6e-45
255577483	529	calcium-dependent protein kinase, putati	0.981	0.204	0.787	9e-45
224104161	533	predicted protein [Populus trichocarpa]	0.981	0.202	0.777	9e-45
255544870	536	calcium-dependent protein kinase, putati	0.981	0.201	0.787	1e-44

>gi|18416872|ref|NP_568281.1| calmodulin-domain protein kinase 7 [Arabidopsis thaliana] gi|75319419|sp|Q38873.1|CDPK7_ARATH RecName: Full=Calcium-dependent protein kinase 7; AltName: Full=Calmodulin-domain protein kinase CDPK isoform 7 gi|13605617|gb|AAK32802.1|AF361634_1 AT5g19450/F7K24_200 [Arabidopsis thaliana] gi|1399277|gb|AAB03247.1| calmodulin-domain protein kinase CDPK isoform 7 [Arabidopsis thaliana] gi|14586378|emb|CAC42909.1| calcium-dependent protein kinase-like protein [Arabidopsis thaliana] gi|332004432|gb|AED91815.1| calmodulin-domain protein kinase 7 [Arabidopsis thaliana]

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTIVEVVQ+CHK GVMH DL P+  LF NKK+
Sbjct: 137 MELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKE 196

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P EQFNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct: 197 TSALKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEIDVWS 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811393|ref|XP_002873580.1| calmodulin-domain protein kinase 7 [Arabidopsis lyrata subsp. lyrata] gi|297319417|gb|EFH49839.1| calmodulin-domain protein kinase 7 [Arabidopsis lyrata subsp. lyrata]

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 94/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTIVEVVQ+CHK GVMH DL P+  LF NKK+
Sbjct: 137 MELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKE 196

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P EQFNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct: 197 TSPLKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEIDVWS 244

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373089193|gb|AEY55359.1| calcium-dependent protein kinase [Morus alba var. multicaulis]

 Score =  184 bits (468), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/108 (79%), Positives = 94/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTIVEVVQ CH+HGVMH DL P+  LF NKK+
Sbjct: 134 MELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQNCHEHGVMHRDLKPENFLFANKKE 193

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P EQFNE+VGS YYMA EVLKRNYGPEVDVWS
Sbjct: 194 NSPLKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLKRNYGPEVDVWS 241

Source: Morus alba var. multicaulis

Species: Morus alba

Genus: Morus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812129|ref|XP_002873948.1| calcium-dependent protein kinase 19 [Arabidopsis lyrata subsp. lyrata] gi|297319785|gb|EFH50207.1| calcium-dependent protein kinase 19 [Arabidopsis lyrata subsp. lyrata]

 Score =  184 bits (467), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 135 MELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKE 194

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P E FNE+VGS YYMA EVL+RNYGPEVD+WS
Sbjct: 195 TSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWS 242

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239742|ref|NP_197446.1| calcium-dependent protein kinase 19 [Arabidopsis thaliana] gi|30687323|ref|NP_850853.1| calcium-dependent protein kinase 19 [Arabidopsis thaliana] gi|75319668|sp|Q42438.1|CDPK8_ARATH RecName: Full=Calcium-dependent protein kinase 8; AltName: Full=Calcium-dependent protein kinase isoform CDPK19; Short=AtCDPK19 gi|836942|gb|AAA67655.1| calcium-dependent protein kinase [Arabidopsis thaliana] gi|836948|gb|AAA67658.1| calcium-dependent protein kinase [Arabidopsis thaliana] gi|332005325|gb|AED92708.1| calcium-dependent protein kinase 19 [Arabidopsis thaliana] gi|332005326|gb|AED92709.1| calcium-dependent protein kinase 19 [Arabidopsis thaliana]

 Score =  184 bits (467), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 135 MELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKE 194

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P E FNE+VGS YYMA EVL+RNYGPEVD+WS
Sbjct: 195 TSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWS 242

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|337729587|gb|AEI70328.1| calcium-dependent protein kinase [Hevea brasiliensis]

 Score =  184 bits (467), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 85/108 (78%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAV KTIVEVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 133 MELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKE 192

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P E+FNE+VGS YYMA EVLKRNYGPEVDVWS
Sbjct: 193 TAALKAIDFGLSVFFKPGEKFNEIVGSPYYMAPEVLKRNYGPEVDVWS 240

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110742404|dbj|BAE99123.1| calcium-dependent protein kinase [Arabidopsis thaliana]

 Score =  184 bits (467), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVMKTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 80  MELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKE 139

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +LKAIDFGLSVFF+P E FNE+VGS YYMA EVL+RNYGPEVD+WS
Sbjct: 140 TSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWS 187

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577483|ref|XP_002529620.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223530905|gb|EEF32765.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  184 bits (466), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 85/108 (78%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIV++GHYTER AAAV KTIVEVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 132 MELCEGGELFDRIVSRGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKE 191

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           S +LKAIDFGLSVFF+P E+FNE+VGS YYMA EVLKRNYGPEVDVWS
Sbjct: 192 SAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDVWS 239

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104161|ref|XP_002313342.1| predicted protein [Populus trichocarpa] gi|222849750|gb|EEE87297.1| predicted protein [Populus trichocarpa]

 Score =  183 bits (465), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVM+TIVEVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 138 MELCEGGELFDRIVARGHYTERAAAAVMRTIVEVVQMCHKHGVMHRDLKPENFLFANKKE 197

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P E+FNE+VGS YYMA E+LKRNYGPEVDVWS
Sbjct: 198 TAVLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEILKRNYGPEVDVWS 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544870|ref|XP_002513496.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223547404|gb|EEF48899.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 85/108 (78%), Positives = 95/108 (87%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LCE GEL DRIVA+GHYTER AAAVM+TIVEVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct: 141 MELCEGGELFDRIVARGHYTERAAAAVMRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKE 200

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +  LKAIDFGLSVFF+P E+FNE+VGS YYMA EVLKRNYGPEVDVWS
Sbjct: 201 TAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDVWS 248

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:505006616	535	CPK7 "calmodulin-domain protei	0.981	0.201	0.777	9.3e-43
TAIR|locus:2150230	533	CDPK19 "calcium-dependent prot	0.981	0.202	0.768	1.5e-42
TAIR|locus:2103498	538	CPK32 "calcium-dependent prote	0.981	0.200	0.777	4e-42
TAIR|locus:2054386	530	CPK14 "calcium-dependent prote	0.981	0.203	0.731	5.9e-41
TAIR|locus:2074338	528	CPK13 "calcium-dependent prote	0.981	0.204	0.731	7.5e-41
TAIR|locus:2027227	541	CPK30 "calcium-dependent prote	0.981	0.199	0.712	2.1e-38
TAIR|locus:2061290	582	CPK24 "AT2G31500" [Arabidopsis	0.981	0.185	0.675	3.4e-38
TAIR|locus:2011201	545	CDPK1 "calcium-dependent prote	0.981	0.198	0.703	8.9e-38
TAIR|locus:2177023	528	CPK17 "calcium-dependent prote	0.990	0.206	0.587	2e-33
TAIR|locus:2150225	523	CPK34 "AT5G19360" [Arabidopsis	0.990	0.208	0.559	2.2e-32

TAIR|locus:505006616 CPK7 "calmodulin-domain protein kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 84/108 (77%), Positives = 95/108 (87%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AAAVMKTIVEVVQ+CHK GVMH DL P+  LF NKK+
Sbjct:   137 MELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKE 196

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             + +LKAIDFGLSVFF+P EQFNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct:   197 TSALKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEIDVWS 244

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150230 CDPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 83/108 (76%), Positives = 95/108 (87%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AAAVMKTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct:   135 MELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKE 194

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             + +LKAIDFGLSVFF+P E FNE+VGS YYMA EVL+RNYGPEVD+WS
Sbjct:   195 TSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWS 242

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2103498 CPK32 "calcium-dependent protein kinase 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 84/108 (77%), Positives = 94/108 (87%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AAAV KTI+EVVQVCHKHGVMH DL P+  LF NKK+
Sbjct:   141 MELCEGGELFDRIVARGHYTERAAAAVTKTIMEVVQVCHKHGVMHRDLKPENFLFGNKKE 200

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             +  LKAIDFGLSVFF+P E+FNE+VGS YYMA EVLKRNYGPEVD+WS
Sbjct:   201 TAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWS 248

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2054386 CPK14 "calcium-dependent protein kinase 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 79/108 (73%), Positives = 95/108 (87%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AA+V+KTI+EVVQ+CHKHGVMH DL P+  LF NKK+
Sbjct:   132 MELCEGGELFDRIVARGHYTERAAASVIKTIIEVVQMCHKHGVMHRDLKPENFLFANKKE 191

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             + SLKAIDFGLSVFF+P E+FNE+VGS YYMA EVL+R+YG E+D+WS
Sbjct:   192 TASLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLRRSYGQEIDIWS 239

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2074338 CPK13 "calcium-dependent protein kinase 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 79/108 (73%), Positives = 93/108 (86%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AA V KTIVEVVQ+CHKHGV+H DL P+  LF NKK+
Sbjct:   132 MELCEGGELFDRIVARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKE 191

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             +  LKAIDFGLS+FF+P E+F+E+VGS YYMA EVLKRNYGPE+D+WS
Sbjct:   192 NSPLKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWS 239

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2027227 CPK30 "calcium-dependent protein kinase 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 77/108 (71%), Positives = 90/108 (83%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AA V +TI EVV++CH +GVMH DL P+  LF NKK+
Sbjct:   137 MELCEGGELFDRIVARGHYTERAAATVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKE 196

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             + +LKAIDFGLSV F+P E+F E+VGS YYMA EVLKRNYGPEVDVWS
Sbjct:   197 NSALKAIDFGLSVLFKPGERFTEIVGSPYYMAPEVLKRNYGPEVDVWS 244

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

TAIR|locus:2061290 CPK24 "AT2G31500" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 73/108 (67%), Positives = 92/108 (85%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M++CE GEL DRIV++GHYTER AA+V KTI+EVV+VCH+HGV+H DL P+  LF N  +
Sbjct:   144 MEICEGGELFDRIVSRGHYTERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTE 203

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             +  LKAIDFGLS+FF+P ++FNE+VGS YYMA EVL+RNYGPE+DVWS
Sbjct:   204 TAQLKAIDFGLSIFFKPAQRFNEIVGSPYYMAPEVLRRNYGPEIDVWS 251

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:1901979 "regulation of inward rectifier potassium channel activity" evidence=IDA

TAIR|locus:2011201 CDPK1 "calcium-dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 76/108 (70%), Positives = 89/108 (82%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LCE GEL DRIVA+GHYTER AAAV +TI EVV +CH +GVMH DL P+  LF NKK+
Sbjct:   141 MELCEGGELFDRIVARGHYTERAAAAVARTIAEVVMMCHSNGVMHRDLKPENFLFANKKE 200

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             +  LKAIDFGLSVFF+P ++F E+VGS YYMA EVLKR+YGP VDVWS
Sbjct:   201 NSPLKAIDFGLSVFFKPGDKFTEIVGSPYYMAPEVLKRDYGPGVDVWS 248

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 64/109 (58%), Positives = 85/109 (77%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LC  GEL DRI+AKGHY+ER AA++++TIV++V  CH  GV+H DL P+  L +NK +
Sbjct:   151 MELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDE 210

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
             +  LKA DFGLSVF++P E F ++VGS YY+A EVLKR YGPE D+WS+
Sbjct:   211 NSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSI 259

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 2.2e-32, P = 2.2e-32
 Identities = 61/109 (55%), Positives = 85/109 (77%)

Query:     1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             M+LC  GEL DRI+AKGHY+ER AA++++TIV+++  CH  GV+H DL P+  L ++K +
Sbjct:   146 MELCAGGELFDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDE 205

Query:    61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
             +  LKA DFGLSVF++P E F ++VGS YY+A EVL+R YGPE D+WS+
Sbjct:   206 NSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSI 254

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0004672 "protein kinase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q38873	CDPK7_ARATH	2, ., 7, ., 1, 1, ., 1	0.7777	0.9818	0.2018	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	110
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-28
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-27
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-21
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-20
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-15
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-14
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-13
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-12
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-12
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-12
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-11
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-11
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-11
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-11
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-11
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-10
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-10
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-10
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-10
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-10
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-10
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-10
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-10
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-09
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-08
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-08
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	9e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-07
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-07
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-07
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-07
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	7e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	7e-07
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-07
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-06
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-06
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-06
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	8e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	9e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-05
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	5e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	8e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	8e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	9e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	9e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-04
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	3e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-04
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	3e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	4e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	5e-04
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	7e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-04
PRK01723	239	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-ac	7e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	8e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.001
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.002
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	0.002
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.002
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.002
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.003
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.003
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.004
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	0.004
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.004
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	0.004
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  101 bits (254), Expect = 7e-28
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ CE G+L D +  +G  +E  A   ++ I+  ++  H  G++H DL P+ IL      
Sbjct: 76  MEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDED-- 133

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFGL+    P E+    VG+  YMA EVL    YG  VD+WS+
Sbjct: 134 -GHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSL 182

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  100 bits (251), Expect = 2e-27
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ CE G+L D +   G  +E  A  +   I+  ++  H +G++H DL P+ IL      
Sbjct: 77  MEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDEN-- 134

Query: 61  SFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
              +K  DFGL+    +        VG+ +YMA EVL     YGP+VDVWS+
Sbjct: 135 -GVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 84.2 bits (209), Expect = 2e-21
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ CE G L D +    G  +E     ++  I+E ++  H +G++H DL P+ IL     
Sbjct: 70  MEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL--DS 127

Query: 60  KSFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
            +  +K  DFGLS      +     +VG+  YMA EVL     Y  + D+WS+
Sbjct: 128 DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSL 180

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 81.9 bits (203), Expect = 3e-20
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ C  G L D + +     TE   A V K +++ ++  H +G++H D+    IL     
Sbjct: 76  MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---T 132

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
               +K IDFGLS      +  N +VG+ Y+MA EV+    Y  + D+WS+
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSL 183

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 69.6 bits (171), Expect = 1e-15
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE 79
            E    + M+ +++ V   H +G+MH DL P  +L         LK  DFGL+  F   E
Sbjct: 97  PEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG---VLKIADFGLARLFSEEE 153

Query: 80  --QFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
              ++  V + +Y A E+L   R Y P VD+W+
Sbjct: 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C  G L + +       E V       ++E +   H HG++H D+ P  I       
Sbjct: 78  MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---H 134

Query: 61  SFSLKAIDFGLSVFF-----RPREQFNELVGSLYYMALEVLKRN----YGPEVDVWSM 109
           +  +K  DFG +V          E+   L G+  YMA EV+       +G   D+WS+
Sbjct: 135 NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSL 192

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 65.9 bits (159), Expect = 5e-14
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 16/123 (13%)

Query: 1   MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+  + G L D +   G     +E  A  ++  I+  ++  H  G++H D+ P+ IL   
Sbjct: 77  MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL-- 134

Query: 58  KKKSFSLKAIDFGLSVFFR-------PREQFNELVGSLYYMALEVLK----RNYGPEVDV 106
            +    +K IDFGL+                +  VG+  YMA EVL            D+
Sbjct: 135 DRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI 194

Query: 107 WSM 109
           WS+
Sbjct: 195 WSL 197

Length = 384

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR 76
           G   E VA   +  IV  ++  H +G++H DL P  IL      +  LK  DFGLS    
Sbjct: 88  GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGL 144

Query: 77  PREQFN---------ELVGSLYYMALEV-LKRNYGPEVDVWSM 109
            R Q N          +VG+  Y+A EV L + +   VD WS+
Sbjct: 145 VRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSL 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    G L   +   G   E V     + I+E +   H +G++H D+    IL  +   
Sbjct: 80  LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV 139

Query: 61  SFSLKAIDFGLSVFF---RPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG +         E    + G+ Y+MA EV++   YG   D+WS+
Sbjct: 140 ---VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSL 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ--FNEL 84
            MK ++E +Q  H +G++H D+    IL  N      LK  DFGL+  +  R    +   
Sbjct: 105 YMKQLLEGLQYLHSNGILHRDIKGSNILINND---GVLKLADFGLARPYTKRNSADYTNR 161

Query: 85  VGSLYYMALEVL--KRNYGPEVDVWS 108
           V +L+Y   E+L     YGPEVD+WS
Sbjct: 162 VITLWYRPPELLLGATRYGPEVDMWS 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   A V   +++ +   H  GV+H D+    IL      
Sbjct: 95  MEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TS 150

Query: 61  SFSLKAIDFG----LSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG    +S    PR +   LVG+ Y+MA EV+ R  YG EVD+WS+
Sbjct: 151 DGRVKLSDFGFCAQVSKEV-PRRK--SLVGTPYWMAPEVISRLPYGTEVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV-FFRPR 78
            E   A V + +++ ++  H   V+H D+    IL ++K    S+K  DFG +    + +
Sbjct: 114 NEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNIL-LSKDG--SVKLADFGFAAQLTKEK 170

Query: 79  EQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            + N +VG+ Y+MA EV+KR  YGP+VD+WS
Sbjct: 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWS 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 60.4 bits (146), Expect = 3e-12
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 96  MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR 154

Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 155 ---VKLSDFGFCAQVSKEVPRRK--SLVGTPYWMAPELISRLPYGPEVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 60.2 bits (146), Expect = 4e-12
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL 96
           CHKHGVMH DL P+ +L V+K+K   LK  D GL   F  P + +   + +L+Y A EVL
Sbjct: 126 CHKHGVMHRDLKPQNLL-VDKQKGL-LKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVL 183

Query: 97  --KRNYGPEVDVWSM 109
               +Y   VD+WS+
Sbjct: 184 LGSTHYSTPVDIWSV 198

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 60.1 bits (146), Expect = 6e-12
 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 15  AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF 74
             G  +E  A   M  + E V   H+ G +H DL P+  L      S  +K  DFGLS  
Sbjct: 94  NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKG 150

Query: 75  FRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
                  N +VGS  YMA EVL+ + Y   VD WS+
Sbjct: 151 IVTYA--NSVVGSPDYMAPEVLRGKGYDFTVDYWSL 184

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 57.8 bits (139), Expect = 3e-11
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL      
Sbjct: 96  MEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GM 151

Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 3e-11
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 18  HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFR 76
              E +  + +  +++ +  CH HG++H DL P+ +L         LK  DFGL+  F  
Sbjct: 94  GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGS 150

Query: 77  PREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           P   +   V + +Y A E+L   + Y   VD+WS
Sbjct: 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWS 184

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 1   MKLCEEGELVD---RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M     G L+D       +G   E + A V+K +++ ++  H +G +H D+    IL   
Sbjct: 78  MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE 137

Query: 58  KKKSFSLKAIDFGLSVFF-----RPREQFNELVGSLYYMALEVLK--RNYGPEVDVWS 108
                S+K  DFG+S        R R+     VG+  +MA EV++    Y  + D+WS
Sbjct: 138 DG---SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWS 192

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 57.6 bits (139), Expect = 4e-11
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL      
Sbjct: 95  MEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GM 150

Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 57.1 bits (139), Expect = 5e-11
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL 96
           CH H ++H DL P+ IL +N+     LK  DFGL+  F  P   +   V +L+Y A E+L
Sbjct: 114 CHSHRILHRDLKPQNIL-INRDG--VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEIL 170

Query: 97  --KRNYGPEVDVWSM 109
              ++Y   VD+WS+
Sbjct: 171 LGSKHYSTAVDIWSV 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 57.1 bits (138), Expect = 5e-11
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 7/95 (7%)

Query: 18  HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP 77
           H++E    + MK ++E +  CHK   +H D+    IL  NK +   +K  DFGL+  +  
Sbjct: 112 HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNS 168

Query: 78  REQ--FNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            E   +   V +L+Y   E+L  +  YGP +DVWS
Sbjct: 169 EESRPYTNKVITLWYRPPELLLGEERYGPAIDVWS 203

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL   +  +G ++E  A      IV  ++  H  G+++ DL P+ IL      
Sbjct: 72  LEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DA 128

Query: 61  SFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFGL+        + N   G+  Y+A EVL    YG  VD WS+
Sbjct: 129 DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSL 179

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPREQFNEL 84
           + M   +  ++  H + ++H DL P  +L  +      LK  DFGL+  F  P  +    
Sbjct: 106 SYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV---LKLADFGLARSFGSPNRKMTHQ 162

Query: 85  VGSLYYMALEVL--KRNYGPEVDVWSM 109
           V + +Y A E+L   R+YG  VD+WS+
Sbjct: 163 VVTRWYRAPELLFGARHYGVGVDMWSV 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)

Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE 79
           +E V  +++  I++ +   HKHG  H DL P+ +L         +K  DFGL+   R R 
Sbjct: 97  SESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG---PEVVKIADFGLAREIRSRP 153

Query: 80  QFNELVGSLYYMALEVLKR--NYGPEVDVWSM 109
            + + V + +Y A E+L R  +Y   VD+W++
Sbjct: 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWAL 185

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L   +  K  ++E      +  IV  ++  H  G++H D+ P  IL   +     +  
Sbjct: 85  GDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH---VHI 141

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
            DF ++    P        G+  YMA EVL R  Y   VD WS+
Sbjct: 142 TDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSL 185

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPREQFNELVG 86
           M  ++  V   H + ++H DL    +L  N+     LK  DFGL+  +  P + + +LV 
Sbjct: 112 MLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVV 168

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y A E+L   + Y   +D+WS
Sbjct: 169 TLWYRAPELLLGAKEYSTAIDMWS 192

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 56.0 bits (135), Expect = 1e-10
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQ 80
           R+    +  I+  +  CH H V+H DL P+ +L    +++ +LK  DFGL+  F  P   
Sbjct: 102 RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI--DRRTNALKLADFGLARAFGIPVRT 159

Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
           F   V +L+Y A E+L   R+Y   VD+WS+
Sbjct: 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSV 190

Length = 294

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 55.2 bits (133), Expect = 3e-10
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL 96
           CH++ V+H DL P+ +L +NK+    LK  DFGL+  F  P   F+  V +L+Y A +VL
Sbjct: 116 CHENRVLHRDLKPQNLL-INKRG--ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVL 172

Query: 97  --KRNYGPEVDVWS 108
              R Y   +D+WS
Sbjct: 173 LGSRTYSTSIDIWS 186

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ +   H + V+H D+    IL      
Sbjct: 95  MEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GM 150

Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.7 bits (131), Expect = 4e-10
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   A V  +++  +   H  GV+H D+    IL  +  +
Sbjct: 98  MEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR 156

Query: 61  SFSLKAIDFGL-SVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG  +   +   +   LVG+ Y+MA EV+ R  YG EVD+WS+
Sbjct: 157 ---IKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 204

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 54.3 bits (130), Expect = 5e-10
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ ++  H + V+H D+    +L      
Sbjct: 95  MEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG- 152

Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 153 --SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 54.3 bits (130), Expect = 6e-10
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  + G L D IV++    E   A V +++++ +   H  GV+H D+    IL     +
Sbjct: 97  MEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR 155

Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG         P+ +   LVG+ Y+MA EV+ R  YG EVD+WS+
Sbjct: 156 ---VKLSDFGFCAQISKDVPKRK--SLVGTPYWMAPEVISRTPYGTEVDIWSL 203

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           +  +++ +  CH H V+H DL P+ +L ++++   +LK  DFGL+  F  P   +   V 
Sbjct: 105 LYQLLQGIAYCHSHRVLHRDLKPQNLL-IDREG--ALKLADFGLARAFGVPVRTYTHEVV 161

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y A E+L   R Y   VD+WS
Sbjct: 162 TLWYRAPEILLGSRQYSTPVDIWS 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 24  AAAVMKTIVEVVQV---CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF--RPR 78
             AV   I +++Q    CH H ++H D+ P+ IL     +S  LK  DFG +     RP 
Sbjct: 99  PDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPA 155

Query: 79  EQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
               + V + +Y A E+L    NYG  VDVW+
Sbjct: 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWA 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRI----VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           M+  + G+L  +I         + E         +   ++  H   ++H D+ P+ I   
Sbjct: 78  MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL- 136

Query: 57  NKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWSM 109
               +  +K  DFG+S            +VG+ YY++ E+ +   Y  + D+WS+
Sbjct: 137 --TSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSL 189

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 7e-09
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 1   MKLCEEG---ELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           M+LC  G   +LV  +  KG    E   A +++  +  +   H++ V+H D+  + IL  
Sbjct: 88  MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147

Query: 57  NKKKSFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVLKRNYGPEV------DVWSM 109
              K+  +K +DFG+S        + N  +G+ Y+MA EV+  +  P+       DVWS+
Sbjct: 148 ---KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSL 204

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIV--AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+    G L D+IV      + E +    +  IV  V   HK G++H D+   K L +  
Sbjct: 78  MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDI---KTLNIFL 134

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNE-LVGSLYYMALEVLK-RNYGPEVDVWSM 109
            K+  +K  DFG+S          E +VG+ YYM+ E+ +   Y  + D+W++
Sbjct: 135 TKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++  E G L   I   G + E + A  +  +++ +   H+ GV+H D+    IL     K
Sbjct: 78  LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TK 134

Query: 61  SFSLKAIDFGLSVFFRP-REQFNELVGSLYYMALEVLKRNYGPEV--DVWS 108
              +K  DFG++       +    +VG+ Y+MA EV+    G     D+WS
Sbjct: 135 DGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVI-EMSGASTASDIWS 184

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 9/73 (12%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLK 97
           H  GV+H DL P  IL +N  ++  LK  DFGL+   R ++ Q    V + YY A E++ 
Sbjct: 125 HSAGVVHRDLKPSNIL-IN--ENCDLKICDFGLA---RIQDPQMTGYVSTRYYRAPEIML 178

Query: 98  --RNYGPEVDVWS 108
             + Y  EVD+WS
Sbjct: 179 TWQKYDVEVDIWS 191

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
            ++ V  CHKH  +H D+ P+ IL     K   +K  DFG + +   P + + + V + +
Sbjct: 109 TLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGDDYTDYVATRW 165

Query: 90  YMALEVL--KRNYGPEVDVWS 108
           Y A E+L     YGP VDVW+
Sbjct: 166 YRAPELLVGDTQYGPPVDVWA 186

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 35  VQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMAL 93
           +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+Y A 
Sbjct: 113 LAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 169

Query: 94  EVL--KRNYGPEVDVWSM 109
           E+L   + Y   VD+WS+
Sbjct: 170 EILLGCKYYSTAVDIWSL 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 25/130 (19%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL+  I   G   E+        I+  ++  H  G++H DL P+ IL      
Sbjct: 81  LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH 140

Query: 61  SFSLKAIDFGLSVFF---------------------RPREQFNELVGSLYYMALEVLKRN 99
              +K  DFG +                        + R +F   VG+  Y++ E+L   
Sbjct: 141 ---IKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK 197

Query: 100 Y-GPEVDVWS 108
             G   D+W+
Sbjct: 198 PAGKSSDLWA 207

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 7e-08
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 15/116 (12%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+  E G +  R + K G   E+  + +++ ++  ++  HK GV+H D+    IL  N  
Sbjct: 81  MEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG 138

Query: 60  KSFSLKAIDFGLSVFF----RPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
               +K  DFG++         R  F   VG+ Y+MA EV+   + Y  + D+WS+
Sbjct: 139 N---VKLCDFGVAALLNQNSSKRSTF---VGTPYWMAPEVITEGKYYDTKADIWSL 188

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M+ ++  V   H H ++H DL P+ IL V       +K  DFGL+  +        +V 
Sbjct: 112 LMRQLLRGVDFLHSHRIVHRDLKPQNIL-VTSDG--QVKIADFGLARIYSFEMALTSVVV 168

Query: 87  SLYYMALEVLKRN-YGPEVDVWS 108
           +L+Y A EVL ++ Y   VD+WS
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWS 191

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C  GEL   +  +G + E  A   +  +V   +  H  G+++ DL P+ +L ++   
Sbjct: 72  MEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLL-LDSNG 130

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWS 108
              +K +DFG +   +  ++     G+  Y+A E+ L + Y   VD WS
Sbjct: 131 --YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWS 177

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 48.2 bits (115), Expect = 9e-08
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 23  VAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQF 81
           +  + M  +++ +  CH H V+H DL P+ +L +NK     LK  DFGL+  F  P   +
Sbjct: 100 IVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLL-INKNG--ELKLADFGLARAFGIPVRCY 156

Query: 82  NELVGSLYYMALEVL--KRNYGPEVDVWS 108
           +  V +L+Y   +VL   + Y   +D+WS
Sbjct: 157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +  + H+TE      +  IV  +   H+ G+++ D+  + IL         +  
Sbjct: 90  GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVL 146

Query: 67  IDFGLSVFFRPREQF--NELVGSLYYMALEVLKR---NYGPEVDVWSM 109
            DFGLS  F   E+       G++ YMA EV++     +   VD WS+
Sbjct: 147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSL 194

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 11/117 (9%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++ C+ G L   ++      TE     V + ++E +   H H V+H DL    IL     
Sbjct: 81  IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT--- 137

Query: 60  KSFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
               +K  DFG+S       ++ +  +G+ Y+MA EV+         Y  + D+WS+
Sbjct: 138 LDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M  ++  +   H H V+H DL P+ IL  +   S  +K  DFGL+  +  +     +V 
Sbjct: 115 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVV 171

Query: 87  SLYYMALEV-LKRNYGPEVDVWSM 109
           +L+Y A EV L+ +Y   VD+WS+
Sbjct: 172 TLWYRAPEVLLQSSYATPVDLWSV 195

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           I++ +  CH   V+H DL P+ +L  NK     +K  DFGL+  F  P   +   V +L+
Sbjct: 110 ILQGILFCHSRRVLHRDLKPQNLLIDNKG---VIKLADFGLARAFGIPVRVYTHEVVTLW 166

Query: 90  YMALEVL--KRNYGPEVDVWSM 109
           Y A EVL     Y   VD+WS+
Sbjct: 167 YRAPEVLLGSPRYSTPVDIWSI 188

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 1   MKLCEEGELVDRI----VAKGHYTERVAAAVMKTIVEVVQVCH-----KHGVMHHDLNPK 51
           M+ CE G+L   I      + +  E     ++  ++  +  CH      + V+H DL P 
Sbjct: 80  MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPA 139

Query: 52  KILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWS 108
            I         ++K  DFGL+        F    VG+ YYM+ E L    Y  + D+WS
Sbjct: 140 NIFLDANN---NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWS 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRP----REQ 80
            VMK ++  +   H++ ++H D+    IL     K   LK  DFGL+  F         +
Sbjct: 123 KVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARAFSLSKNSKPNR 179

Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           +   V +L+Y   E+L  +R+YGP +D+W 
Sbjct: 180 YTNRVVTLWYRPPELLLGERDYGPPIDMWG 209

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 20/120 (16%)

Query: 6   EGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK 65
             +L   +  K   TE     ++  I+  + V HK   MH DL+P  I F+N K     K
Sbjct: 103 ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANI-FINSKG--ICK 159

Query: 66  AIDFGLSVFF---------------RPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
             DFGL+  +               + RE+    V +L+Y A E+L     Y   VD+WS
Sbjct: 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS 219

Length = 335

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (110), Expect = 4e-07
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +  +G ++E  A   +  +V  ++  HK+ +++ DL P+ IL      +  +  
Sbjct: 81  GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIAL 137

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            DFGLS       +  N   G+  Y+A EVL  ++ Y   VD WS+
Sbjct: 138 CDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSL 183

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)

Query: 35  VQVC------HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGS 87
           VQ+C      H   +MH D+ P  + F+       +K  D GL  FF  +    + LVG+
Sbjct: 113 VQLCSALEHMHSKRIMHRDIKPANV-FITATG--VVKLGDLGLGRFFSSKTTAAHSLVGT 169

Query: 88  LYYMALEVLKRN-YGPEVDVWSM 109
            YYM+ E +  N Y  + D+WS+
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 45.5 bits (107), Expect = 6e-07
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 1   MKLCEEGELVDRIV-AKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G + D I   KG+   E   A + + I+  +   H+H V+H D+  + +L    
Sbjct: 88  MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147

Query: 59  KKSFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVLKRNYGPEV------DVWSM 109
            +   +K +DFG+S    R   + N  +G+ Y+MA EV+  +  P+       D+WS+
Sbjct: 148 AE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 202

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.5 bits (108), Expect = 6e-07
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS---V 73
           G + E V     + I+  ++  H    +H D+    IL         +K  DFG++   V
Sbjct: 97  GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG---VVKLADFGMAKQVV 153

Query: 74  FFRPREQFNELVGSLYYMALEVLKR--NYGPEVDVWSM 109
            F   + F    GS Y+MA EV+ +   YG   D+WS+
Sbjct: 154 EFSFAKSF---KGSPYWMAPEVIAQQGGYGLAADIWSL 188

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 45.6 bits (108), Expect = 7e-07
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 11/101 (10%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS---- 72
           G + E +    ++ I++ +   H  G++H D+    IL  NK     +K  DFG+S    
Sbjct: 101 GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG---IKISDFGISKKLE 157

Query: 73  ---VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +  +       L GS+++MA EV+K+  Y  + D+WS+
Sbjct: 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSL 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 45.3 bits (107), Expect = 7e-07
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M+  +  +   H + ++H DL P+ IL  +  +   +K  DFGL+  +  +     +V 
Sbjct: 113 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ---VKLADFGLARIYSCQMALTPVVV 169

Query: 87  SLYYMALEV-LKRNYGPEVDVWS 108
           +L+Y A EV L+  Y   VD+WS
Sbjct: 170 TLWYRAPEVLLQSTYATPVDMWS 192

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 8e-07
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 16/118 (13%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G + D++ A G  TE V     + I+E V+  H + ++H D+    IL   +  
Sbjct: 83  MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL---RDS 139

Query: 61  SFSLKAIDFGLSVFFRPREQ--------FNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           + ++K  DFG S     R Q           + G+ Y+M+ EV+    YG + DVWS+
Sbjct: 140 AGNVKLGDFGAS----KRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSV 193

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 45.2 bits (107), Expect = 9e-07
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +  +G + E  A   +  I   ++  H+ G+++ DL P+ IL         +K 
Sbjct: 85  GELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKL 141

Query: 67  IDFGLSVFFRPREQFNE------LVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFGL      +E  +E        G++ YMA E+L R+ +G  VD WS+
Sbjct: 142 TDFGLC-----KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSL 186

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G + D++ + G  TE V     + I+E V   H + ++H D+    IL   +  
Sbjct: 85  MEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANIL---RDS 141

Query: 61  SFSLKAIDFG----LSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
             ++K  DFG    L            + G+ Y+M+ EV+    YG + D+WS+
Sbjct: 142 VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSV 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVGSLY 89
           I+  ++ CH H ++H D+ P+ IL     +S  +K  DFG +     P E + + V + +
Sbjct: 109 ILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYTDYVATRW 165

Query: 90  YMALEVLKRN--YGPEVDVWSM 109
           Y A E+L  +  YG  VD+W++
Sbjct: 166 YRAPELLVGDTKYGRAVDIWAV 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 1   MKLCEEGELVD--RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G + D  +I  K   TE   AA++   ++ ++  H +  +H D+    IL +N+
Sbjct: 77  MEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNIL-LNE 134

Query: 59  KKSFSLKAIDFGLS--VFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
           +     K  DFG+S  +     ++ N ++G+ ++MA EV++   Y  + D+WS+
Sbjct: 135 EGQ--AKLADFGVSGQLTDTMAKR-NTVIGTPFWMAPEVIQEIGYNNKADIWSL 185

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G + D++ A G  TE V     + I++ V   H + ++H D+    IL   +  + ++K 
Sbjct: 91  GSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANIL---RDSAGNVKL 147

Query: 67  IDFGLS----VFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            DFG S               + G+ Y+M+ EV+    YG + DVWS+
Sbjct: 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSV 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 34/101 (33%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-------------------------- 72
           HK G +H D+ P  IL         +K  DFGL                           
Sbjct: 118 HKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVL 174

Query: 73  VFFRPREQ----FNELVGSLYYMALEVLKR-NYGPEVDVWS 108
           V  R  +Q     N  VG+  Y+A EVL+   YG E D WS
Sbjct: 175 VRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWS 215

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 23/120 (19%)

Query: 1   MKLCEEGELVDRI--VAKGHYTERVAAAVMKTIVEVVQ----VCHKHGVMHHDLNPKKIL 54
           M+  + G L D+I    +G   ER+     K  V V++    +  KH ++H D+ P  IL
Sbjct: 78  MEYMDGGSL-DKILKEVQGRIPERILG---KIAVAVLKGLTYLHEKHKIIHRDVKPSNIL 133

Query: 55  FVNKKKSFSLKAIDFGLSVFFRPREQFNEL----VGSLYYMALEVLKRN-YGPEVDVWSM 109
            VN +     K  DFG+S      +  N L    VG+  YMA E ++ N Y  + D+WS+
Sbjct: 134 -VNSRGQI--KLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSL 185

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 43.5 bits (102), Expect = 4e-06
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G + D++ A G  TE V     + I+E +   H + ++H D+    IL   +  
Sbjct: 85  MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANIL---RDS 141

Query: 61  SFSLKAIDFG----LSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           + ++K  DFG    L            + G+ Y+M+ EV+    YG + DVWS+
Sbjct: 142 AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSL 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 43.1 bits (101), Expect = 5e-06
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 12/118 (10%)

Query: 1   MKLCEEGELVDRIV-AKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G + D +   KG+   E   A + + I+  +   H H V+H D+  + +L    
Sbjct: 98  MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157

Query: 59  KKSFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVLKRNYGPEV------DVWSM 109
            +   +K +DFG+S    R   + N  +G+ Y+MA EV+  +  P+       D+WS+
Sbjct: 158 AE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSL 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 43.1 bits (101), Expect = 5e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 14/108 (12%)

Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L + G + ++I+ K      V+ AV+K +  + +   KH +MH D+ P  IL VN +   
Sbjct: 94  LKKAGRIPEQILGK------VSIAVIKGLTYLRE---KHKIMHRDVKPSNIL-VNSRG-- 141

Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 142 EIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 188

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.8 bits (101), Expect = 6e-06
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 27/123 (21%)

Query: 1   MKLCEEGELVDRIVAK-----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF 55
           M+ CE G L D I  K     G   E+V   + +++++ +   H   ++H D+ P  IL 
Sbjct: 80  MEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL 138

Query: 56  VNKKKSFSLKAIDFGLSVFFRPREQFNELVGSL--------YYMALEVLK-RNYGPEVDV 106
             K +   +K  DFG+S          ELV SL        +YMA E ++ + Y    DV
Sbjct: 139 TRKGQ---VKLCDFGVS---------GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDV 186

Query: 107 WSM 109
           WS+
Sbjct: 187 WSL 189

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 42.5 bits (100), Expect = 8e-06
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 1   MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHG-VMHHDLNPKKILF 55
           M L E   L +   +    K  +TE     +   +V  ++  HK   ++H DL P  I+ 
Sbjct: 88  MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147

Query: 56  VNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               K   +   DFGL+   +P  +   +VG++ Y   E++K   YG + DVW+
Sbjct: 148 GEDDK---VTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWA 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 42.7 bits (100), Expect = 8e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF 81
           +V+ AV++ +  + +   KH +MH D+ P  IL VN +    +K  DFG+S         
Sbjct: 107 KVSIAVLRGLAYLRE---KHQIMHRDVKPSNIL-VNSRG--EIKLCDFGVSGQL-IDSMA 159

Query: 82  NELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSM 188

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +V  V+  H+ G++H D+ P+ +L         LK  DFGLS   R   +  + VG+  Y
Sbjct: 106 VVLGVEDLHQRGIIHRDIKPENLLIDQTGH---LKLTDFGLS---RNGLENKKFVGTPDY 159

Query: 91  MALEVLKRNYGPE-VDVWSM 109
           +A E +      +  D WS+
Sbjct: 160 LAPETILGVGDDKMSDWWSL 179

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 9/75 (12%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN---ELVGSLYYMALEV 95
           H  G++H D+ P  +L VN   +  LK  DFGL+    P E  +   E+V + YY A E+
Sbjct: 120 HSAGILHRDIKPGNLL-VNS--NCVLKICDFGLARVEEPDESKHMTQEVV-TQYYRAPEI 175

Query: 96  L--KRNYGPEVDVWS 108
           L   R+Y   VD+WS
Sbjct: 176 LMGSRHYTSAVDIWS 190

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 18/118 (15%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH----KHGVMHHDLNPKKILFV 56
           M  C + +L+ RI  +G   E +     K  V +V+  H    KHGV+H D+ P  IL  
Sbjct: 96  MSTCLD-KLLKRI--QGPIPEDILG---KMTVAIVKALHYLKEKHGVIHRDVKPSNILL- 148

Query: 57  NKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-----KRNYGPEVDVWSM 109
               S ++K  DFG+S      +      G   YMA E +        Y    DVWS+
Sbjct: 149 --DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSL 204

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 1   MKLCEE--GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ CE+    L+D +     ++E     +M  ++  +Q  H++ ++H DL    +L  +K
Sbjct: 87  MEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDK 144

Query: 59  KKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
                LK  DFGL+  +  P +     V +L+Y A E+L     Y   +D+W+
Sbjct: 145 G---CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWA 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE----QFNELVGSLYYMALE 94
           H   V+H DL P  IL VN   +  LK  DFGL+    P E       E V + +Y A E
Sbjct: 120 HSANVIHRDLKPSNIL-VNS--NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPE 176

Query: 95  VL--KRNYGPEVDVWS 108
           +L     Y   +D+WS
Sbjct: 177 LLLSSSRYTKAIDIWS 192

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-----VFFRPREQFNELVGSLYYMAL 93
           H   V+H DL P  +L VN      LK  DFGL+               E V + +Y A 
Sbjct: 122 HSANVLHRDLKPGNLL-VN--ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAP 178

Query: 94  EVL--KRNYGPEVDVWS 108
           E++   ++Y   +DVWS
Sbjct: 179 EIMLSFQSYTKAIDVWS 195

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL 84
           AA+    ++ +   H H ++H D+    IL     +   +K  DFG +    P    N  
Sbjct: 128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ---VKLADFGSASIASPA---NSF 181

Query: 85  VGSLYYMALEVL----KRNYGPEVDVWSM 109
           VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 182 VGTPYWMAPEVILAMDEGQYDGKVDVWSL 210

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 41.0 bits (96), Expect = 2e-05
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 12/102 (11%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR 76
             + E +A   +  +V  +   H+ G +H D+ P+ +L     ++  +K  DFG +    
Sbjct: 97  DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLT 153

Query: 77  PREQFNEL--VGSLYYMALEVL-------KRNYGPEVDVWSM 109
             +  N    VG+  Y+A EVL       K  YG E D WS+
Sbjct: 154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSL 195

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 140 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 196

Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 197 MGYKENVDIWSV 208

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV-FFRPR 78
           TE     V K  +E +   H++ ++H DL    ILF        +K  DFG+S    R  
Sbjct: 101 TEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRTI 157

Query: 79  EQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
           ++ +  +G+ Y+MA EV+       R Y  + DVWS+
Sbjct: 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           I+  +  CH+  V+H DL P+ +L +N++    LK  DFGL+     P + ++  V +L+
Sbjct: 113 ILRGLAYCHRRKVLHRDLKPQNLL-INERG--ELKLADFGLARAKSVPTKTYSNEVVTLW 169

Query: 90  YMALEVL--KRNYGPEVDVWSM 109
           Y   +VL     Y  ++D+W +
Sbjct: 170 YRPPDVLLGSSEYSTQIDMWGV 191

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 10/88 (11%)

Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP----REQF 81
           A+ ++++  +Q  H++ ++H D+  + I F+N      L   DFG + F  P      ++
Sbjct: 186 AIERSVLRAIQYLHENRIIHRDIKAENI-FINHPGDVCLG--DFGAACF--PVDINANKY 240

Query: 82  NELVGSLYYMALEVLKRN-YGPEVDVWS 108
               G++   A E+L R+ YGP VD+WS
Sbjct: 241 YGWAGTIATNAPELLARDPYGPAVDIWS 268

Length = 391

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 136 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 193 MGYKENVDIWSV 204

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 39.6 bits (92), Expect = 7e-05
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 35  VQVC------HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ-FNELVGS 87
           VQ+C      H   VMH D+ P  +       +  +K  D GL  FF  +    + LVG+
Sbjct: 113 VQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGT 169

Query: 88  LYYMALEVLKRN-YGPEVDVWSM 109
            YYM+ E +  N Y  + D+WS+
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 14  VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV 73
           V K    E   AAV    ++ +   H H ++H D+    IL         +K  DFG + 
Sbjct: 107 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL---VKLGDFGSAS 163

Query: 74  FFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              P    N  VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 164 IMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL 84
           AA+    ++ +   H H ++H D+    IL     +   +K  DFG +    P    N  
Sbjct: 124 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ---VKLADFGSASKSSPA---NSF 177

Query: 85  VGSLYYMALEVL----KRNYGPEVDVWSM 109
           VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSL 206

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 8e-05
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 12/114 (10%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C  G  +D ++  G   E   A +++ ++  ++  H+ G +H D+    IL     +
Sbjct: 78  MEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SE 133

Query: 61  SFSLKAIDFG----LSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG    L+     R  F   VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 134 EGDVKLADFGVSGQLTSTMSKRNTF---VGTPFWMAPEVIKQSGYDEKADIWSL 184

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG--LSVFFRPREQFNELVGSLYYMALEVL 96
           H++G+ H D+ P+ IL     K   LK  DFG    ++ +P   + E + + +Y A E L
Sbjct: 117 HRNGIFHRDIKPENILI----KDDILKLADFGSCRGIYSKP--PYTEYISTRWYRAPECL 170

Query: 97  KRN--YGPEVDVWS 108
             +  YGP++D+W+
Sbjct: 171 LTDGYYGPKMDIWA 184

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 39.6 bits (92), Expect = 9e-05
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 39.6 bits (92), Expect = 9e-05
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL 96
           CH+  V+H DL P+ +L +N++    LK  DFGL+     P + ++  V +L+Y   ++L
Sbjct: 120 CHRRKVLHRDLKPQNLL-INERG--ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDIL 176

Query: 97  --KRNYGPEVDVWSM 109
               +Y  ++D+W +
Sbjct: 177 LGSTDYSTQIDMWGV 191

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 9/59 (15%)

Query: 17  GHYTERVAAAVMKTIVEVV---QVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS 72
           G++ E +A   +K I EV       H+HG++H DL P  +L  N+     +K  DFGLS
Sbjct: 99  GYFDEEMA---VKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGH---IKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GE+   +  + +++E         I+  ++  HK G+++ D+  + IL  ++     +  
Sbjct: 90  GEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGH---VVL 146

Query: 67  IDFGLSVFF--RPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            DFGLS  F    +E+     G++ YMA E++  K  +G  VD WS+
Sbjct: 147 TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSL 193

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 135 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 191

Query: 98  RNYGPEVDVWS 108
             Y   VD+WS
Sbjct: 192 MGYKENVDIWS 202

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 23/98 (23%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP---------- 77
           M  ++E +   H++ ++H D+    IL  N+     LK  DFGL+   RP          
Sbjct: 121 MLQLLEGINYLHENHILHRDIKAANILIDNQG---ILKIADFGLA---RPYDGPPPNPKG 174

Query: 78  -----REQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
                  ++  LV + +Y   E+L  +R Y   VD+W 
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWG 212

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 35  VQVC------HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGS 87
           VQ+C      H   VMH D+ P  +       +  +K  D GL  FF  +    + LVG+
Sbjct: 113 VQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGT 169

Query: 88  LYYMALEVLKRN-YGPEVDVWSM 109
            YYM+ E +  N Y  + D+WS+
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C  G L D     G  +E   A V +  ++ +   H  G MH D+    IL  +   
Sbjct: 85  MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH 144

Query: 61  SFSLKAIDFGLS----VFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG+S         R+ F   +G+ Y+MA EV     K  Y    D+W++
Sbjct: 145 ---VKLADFGVSAQITATIAKRKSF---IGTPYWMAPEVAAVERKGGYNQLCDIWAV 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 18/94 (19%)

Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF 81
           +++ AV++ +  + +   KH +MH D+ P  IL VN +    +K  DFG+S       Q 
Sbjct: 103 KISIAVLRGLTYLRE---KHKIMHRDVKPSNIL-VNSRG--EIKLCDFGVS------GQL 150

Query: 82  -----NELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                N  VG+  YM+ E L+   Y  + D+WS+
Sbjct: 151 IDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSL 184

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 14/107 (13%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D       YT        K I+E ++  H + ++H D+    +L VN   S  +K 
Sbjct: 101 GPLKDNEQTIIFYT--------KQILEGLKYLHDNQIVHRDIKGDNVL-VNTY-SGVVKI 150

Query: 67  IDFGLSVFFRPREQFNE-LVGSLYYMALEVLK---RNYGPEVDVWSM 109
            DFG S          E   G+L YMA EV+    R YG   D+WS+
Sbjct: 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSL 197

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRI-VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ C  G L D   V +G  +E   A V +  ++ +   H+ G +H D+    IL     
Sbjct: 79  MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT--- 135

Query: 60  KSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
           +   +K  DFG+S        +    +G+ Y+MA EV     K  Y  + D+W++
Sbjct: 136 EDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWAL 190

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 12/78 (15%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL----SVFFRPREQFNELVGSLYYMAL 93
           CHK  ++H DL P+ +L +N+K    LK  DFGL    SV   P + ++  V +L+Y   
Sbjct: 119 CHKRKILHRDLKPQNLL-INEKG--ELKLADFGLARAKSV---PTKTYSNEVVTLWYRPP 172

Query: 94  EVL--KRNYGPEVDVWSM 109
           +VL     Y   +D+W +
Sbjct: 173 DVLLGSTEYSTPIDMWGV 190

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL 84
           AA+    ++ +   H H  +H D+    IL        ++K  DFG +    P   F   
Sbjct: 118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG---TVKLADFGSASLVSPANSF--- 171

Query: 85  VGSLYYMALEVL----KRNYGPEVDVWSM 109
           VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 20/95 (21%)

Query: 32  VEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF--------------RP 77
           V  ++  H +G++H DL P  +L  +      +K  DFGLS                 + 
Sbjct: 111 VLALEYLHNYGIVHRDLKPDNLLITSMGH---IKLTDFGLSKIGLMSLTTNLYEGHIEKD 167

Query: 78  REQF--NELVGSLYYMALEV-LKRNYGPEVDVWSM 109
             +F   ++ G+  Y+A EV L++ YG  VD W+M
Sbjct: 168 TREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAM 202

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK- 97
           H   ++H DL  + IL ++K K   +K  DFG+S     + +   +VG+  Y++ E+ + 
Sbjct: 118 HTKLILHRDLKTQNIL-LDKHKMV-VKIGDFGISKILSSKSKAYTVVGTPCYISPELCEG 175

Query: 98  RNYGPEVDVWSM 109
           + Y  + D+W++
Sbjct: 176 KPYNQKSDIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 12/76 (15%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL----SVFFRPREQFNELVGSLYYMAL 93
           CH+  V+H DL P+ +L   + +   LK  DFGL    SV   P + ++  V +L+Y   
Sbjct: 119 CHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSV---PSKTYSNEVVTLWYRPP 172

Query: 94  EVL--KRNYGPEVDVW 107
           +VL     Y   +D+W
Sbjct: 173 DVLLGSTEYSTSLDMW 188

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 15/102 (14%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR 76
           G + E++     + ++E +   H  G++H DL    +L          K  DFG+S   +
Sbjct: 103 GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGIS---K 156

Query: 77  PRE------QFNELVGSLYYMALEVL---KRNYGPEVDVWSM 109
             +      Q   + GS+++MA EV+    + Y  +VD+WS+
Sbjct: 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSL 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFGLSVFF----RPREQ 80
           +++  I++ +   H + V+H DL P  IL + +  +   +K  D G +  F    +P   
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171

Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            + +V + +Y A E+L   R+Y   +D+W++
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAI 202

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF 81
             A  + K I+E ++  H   ++H D+  + I F+N      +   D G + F      F
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENI-FINDVDQVCIG--DLGAAQFPVVAPAF 213

Query: 82  NELVGSLYYMALEVLKRN-YGPEVDVWS 108
             L G++   A EVL R+ Y  + D+WS
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWS 241

Length = 357

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFGLSVFF----RPREQ 80
           +++  I++ +   H + V+H DL P  IL + +  +   +K  D G +  F    +P   
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171

Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            + +V + +Y A E+L   R+Y   +D+W++
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAI 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 3e-04
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 9/93 (9%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G+L+  ++    ++E V    M   V  ++  HK G +H D+ P  IL     +
Sbjct: 80  MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DR 136

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMAL 93
              +K  DFGLS  F  +        S YY  L
Sbjct: 137 GGHIKLSDFGLSTGFHKQHD------SAYYQKL 163

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP--REQFNELVGSL 88
           +++ +  CHK+ ++H D+ P+ +L  +      LK  DFG +          + E V + 
Sbjct: 109 LIKAIHWCHKNDIVHRDIKPENLLISHND---VLKLCDFGFARNLSEGSNANYTEYVATR 165

Query: 89  YYMALE-VLKRNYGPEVDVWSM 109
           +Y + E +L   YG  VD+WS+
Sbjct: 166 WYRSPELLLGAPYGKAVDMWSV 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 17  GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV--- 73
           G + E V     + ++  +   H++ ++H D+    +L  +  +   L+  DFG +    
Sbjct: 98  GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLA 155

Query: 74  --FFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
                  E   +L+G++ +MA EVL+   YG   DVWS+
Sbjct: 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSV 194

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVL- 96
           H   V+H DL P  +L +N      LK  DFGL+     +  F  E V + +Y A E+L 
Sbjct: 125 HSANVLHRDLKPSNLL-LNAN--CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLL 181

Query: 97  -KRNYGPEVDVWS 108
               Y   +DVWS
Sbjct: 182 NCSEYTTAIDVWS 194

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEV 95
           H  G++H DL P  I  VN  +   LK +DFGL+     R   +E+   V + +Y A E+
Sbjct: 135 HSAGIIHRDLKPSNIA-VN--EDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEI 186

Query: 96  L--KRNYGPEVDVWS 108
           +    +Y   VD+WS
Sbjct: 187 MLNWMHYNQTVDIWS 201

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 6/104 (5%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +   G ++          IV  ++  H   +++ DL P+ IL     K   +K 
Sbjct: 86  GELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKL 142

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG +   R R     L G+  Y+A EV++   +   VD W++
Sbjct: 143 TDFGFAKKLRDRTW--TLCGTPEYLAPEVIQSKGHNKAVDWWAL 184

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 14/95 (14%)

Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           E+  RI       +++   +MK ++  ++  H+HG+ H D+ P+ I+     + +    I
Sbjct: 115 EIFKRIKC---KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY---II 168

Query: 68  DFGLSVFF--------RPREQFNELVGSLYYMALE 94
           D+G++  F          +EQ +   G+LYY  L+
Sbjct: 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD 203

Length = 294

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 35  VQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-EQFNELVGSLYYMAL 93
           V   H+  ++H DL  K I   N      LK  DFG+S       +      G+ YYM+ 
Sbjct: 119 VHYMHQRRILHRDLKAKNIFLKNN----LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSP 174

Query: 94  EVLK-RNYGPEVDVWSM 109
           E LK + Y  + D+WS+
Sbjct: 175 EALKHQGYDSKSDIWSL 191

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 16/116 (13%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + G L DRI  K G     +   +   +VE +  + + H +MH D+ P  IL  ++
Sbjct: 82  MEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR 140

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNEL----VGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   +K  DFG+S      E  N +    VG+  YM+ E ++   Y  + DVWS+
Sbjct: 141 GQ---IKLCDFGVS-----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSL 188

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ---F 81
            AV + ++  +   H  G++H D+  + +  VN  +   L   DFG + F R        
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTENV-LVNGPEDICLG--DFGAACFARGSWSTPFH 319

Query: 82  NELVGSLYYMALEVLKRN-YGPEVDVWS 108
             + G++   A EVL  + Y P VD+WS
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWS 347

Length = 461

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 20/83 (24%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN---------ELVGSLY 89
           H   V H DL PK IL     K   LK  DFGL+     R  FN         + V + +
Sbjct: 120 HTANVFHRDLKPKNILANADCK---LKICDFGLA-----RVAFNDTPTAIFWTDYVATRW 171

Query: 90  YMALEV---LKRNYGPEVDVWSM 109
           Y A E+       Y P +D+WS+
Sbjct: 172 YRAPELCGSFFSKYTPAIDIWSI 194

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 13  IVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS 72
           ++  G   E   A +++ I++ +   H    +H D+    +L     +   +K  DFG++
Sbjct: 92  LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVA 148

Query: 73  VFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                 + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG 70
           ++   +M+ I+  +   H  G++H D+ P+ I+F     SF  K ID G
Sbjct: 255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSF--KIIDLG 301

Length = 566

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G+L+  I   G + E  A      IV  +Q  H+ G+++ DL    +L      
Sbjct: 75  MEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DS 131

Query: 61  SFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              +K  DFG+           +   G+  Y+A E+L  + YGP VD W++
Sbjct: 132 EGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWAL 182

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|234975 PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDF 69
           H  GV H DLN   IL     K F L  IDF
Sbjct: 159 HDAGVYHADLNAHNILLDPDGK-FWL--IDF 186

Length = 239

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+++  ++  G + E +A   +  +   V+  HK G +H D+ P  IL     +   +K 
Sbjct: 86  GDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKL 142

Query: 67  IDFGLSVFFR 76
            DFGL   FR
Sbjct: 143 TDFGLCTGFR 152

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.6 bits (84), Expect = 9e-04
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 13  IVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS 72
           ++  G   E   A +++ I++ +   H    +H D+    +L   +     +K  DFG++
Sbjct: 92  LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG---DVKLADFGVA 148

Query: 73  VFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                 + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSL 187

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +  +  + E+        IV  ++  HK G+++ D+  + IL      +  +  
Sbjct: 90  GELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVL 146

Query: 67  IDFGLSVFF--RPREQFNELVGSLYYMALEVLK---RNYGPEVDVWSM 109
            DFGLS  F     E+     G++ YMA ++++     +   VD WSM
Sbjct: 147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSM 194

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 14/117 (11%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C  G L D     G  +E   A V +  ++ +   H  G MH D+    IL  +   
Sbjct: 85  MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG- 143

Query: 61  SFSLKAIDFG----LSVFFRPREQFNELVGSLYYMALEV--LKRN--YGPEVDVWSM 109
              +K  DFG    ++     R+ F   +G+ Y+MA EV  +++N  Y    D+W++
Sbjct: 144 --DVKLADFGVAAKITATIAKRKSF---IGTPYWMAPEVAAVEKNGGYNQLCDIWAV 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIV-AKGHY-TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M  CE G+L  ++   KG    E         I   +Q  H+  ++H DL  + +     
Sbjct: 79  MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT-- 136

Query: 59  KKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
            ++  +K  D G++ V     +  + L+G+ YYM+ E+   + Y  + DVW++
Sbjct: 137 -RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWAL 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK- 97
           H+   ++ DL P+ IL  +      ++  D GL+V     E     VG++ YMA EVL  
Sbjct: 119 HRENTVYRDLKPENILLDDYGH---IRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN 175

Query: 98  RNYGPEVDVWSM 109
           + Y    D W +
Sbjct: 176 QRYTLSPDYWGL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 36.0 bits (83), Expect = 0.002
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 13/76 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG---SLYYMALEV 95
           H  G++H DL P   L VN  +   LK +DFGL+     R    E+ G   + +Y A EV
Sbjct: 134 HSAGIIHRDLKPGN-LAVN--EDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEV 185

Query: 96  LKR--NYGPEVDVWSM 109
           +    +Y   VD+WS+
Sbjct: 186 ILNWMHYNQTVDIWSV 201

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 10/96 (10%)

Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           E+ A      +V  +   H  G +H D+ P  +L     KS  LK  DFG  +       
Sbjct: 141 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM 197

Query: 81  F--NELVGSLYYMALEVLKRN-----YGPEVDVWSM 109
              +  VG+  Y++ EVLK       YG E D WS+
Sbjct: 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 233

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 39  HKHGVMHHDLNPKKILFV-NKKKSFSLKAIDFGLSVFFR-PREQF---NELVGSLYYMAL 93
           H + V+H DL P  IL +    +   +K  D GL+  F  P +     + +V +++Y A 
Sbjct: 125 HSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184

Query: 94  EVL--KRNYGPEVDVWS 108
           E+L   R+Y   +D+W+
Sbjct: 185 ELLLGARHYTKAIDIWA 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE----QFNELVGSLYYMALE 94
           H   V+H DL P  +L +N   +  LK  DFGL+    P         E V + +Y A E
Sbjct: 123 HSANVLHRDLKPSNLL-LN--TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPE 179

Query: 95  VL--KRNYGPEVDVWS 108
           ++   + Y   +D+WS
Sbjct: 180 IMLNSKGYTKAIDIWS 195

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+++  ++  G + E +A   +  +   ++  HK G +H D+ P  IL     +   +K 
Sbjct: 86  GDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKL 142

Query: 67  IDFGLSVFFR 76
            DFGL   FR
Sbjct: 143 TDFGLCTGFR 152

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 35.3 bits (82), Expect = 0.002
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF 74
             E     +++ +  +V   HK G++H DL    I+    +  F    IDFGL  F
Sbjct: 89  ALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGRIYF----IDFGLGEF 140

Length = 204

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRI-VAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C+ G+L+ +I + +G  + E         +   VQ  H+  V+H D+  K I     
Sbjct: 77  MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN 136

Query: 59  KKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
            K   +K  DFG + +   P       VG+ YY+  E+ +   Y  + D+WS+
Sbjct: 137 GK---VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSL 186

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           I+  ++  H   ++H DL P   L VN  +   LK +DFGL+      ++    V + +Y
Sbjct: 129 ILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLAR--HTDDEMTGYVATRWY 183

Query: 91  MALEVLKR--NYGPEVDVWSM 109
            A E++    +Y   VD+WS+
Sbjct: 184 RAPEIMLNWMHYNQTVDIWSV 204

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           ++  +Q  H+  ++H DL    IL V    +  +K  D G+S   +        +G+ +Y
Sbjct: 112 LLRGLQALHEQKILHRDLKSANILLVA---NDLVKIGDLGISKVLKKN-MAKTQIGTPHY 167

Query: 91  MALEVLK-RNYGPEVDVWSM 109
           MA EV K R Y  + D+WS+
Sbjct: 168 MAPEVWKGRPYSYKSDIWSL 187

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 23  VAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN 82
           V   VM+ ++  ++  H+ G++H D+ P+ +L     +   +K IDFG +V       FN
Sbjct: 310 VIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ---VKIIDFGAAVDMCTGINFN 366

Query: 83  ELVGSL 88
            L G L
Sbjct: 367 PLYGML 372

Length = 507

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 13/76 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSL---YYMALEV 95
           H  G++H DL P   L VN+     LK +DFGL+     R+  +E+ G +   +Y A EV
Sbjct: 135 HAAGIIHRDLKPGN-LAVNED--CELKILDFGLA-----RQTDSEMTGYVVTRWYRAPEV 186

Query: 96  LKR--NYGPEVDVWSM 109
           +    +Y   VD+WS+
Sbjct: 187 ILNWMHYTQTVDIWSV 202

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+++  ++    + E +A   +  +   ++  HK G +H D+ P  IL         +K 
Sbjct: 86  GDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKL 142

Query: 67  IDFGLSVFFR 76
            DFGL   FR
Sbjct: 143 TDFGLCTGFR 152

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR 98
           H+  +++ DL P+ +L  +     +++  D GL+V  +  ++     G+  YMA EVL+ 
Sbjct: 112 HQRRIVYRDLKPENVLLDDHG---NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQG 168

Query: 99  N-YGPEVDVWSM 109
             Y   VD +++
Sbjct: 169 EVYDFSVDWFAL 180

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 34.5 bits (80), Expect = 0.004
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS 72
           +++ I  +V   HK G++H DL    I+  + K       IDFGL 
Sbjct: 95  LLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDKLYL----IDFGLG 136

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 12/111 (10%)

Query: 8   ELVDRIVAKGHYT--ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK 65
           E +D    +G +   E+  A V + I+  +   H+  ++H D+ P  +L +N  K  ++K
Sbjct: 152 EFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLL-INSAK--NVK 208

Query: 66  AIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRNY------GPEVDVWSM 109
             DFG+S +  +  +  N  VG++ YM+ E +  +       G   D+WS+
Sbjct: 209 IADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSL 259

Length = 353

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	99.98
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.96
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
KOG0589	426	consensus Serine/threonine protein kinase [General	99.96
KOG0605	550	consensus NDR and related serine/threonine kinases	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.95
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.95
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.95
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.95
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.95
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.95
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.95
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.94
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.94
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
KOG0610	459	consensus Putative serine/threonine protein kinase	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.94
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.93
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.93
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.93
KOG0586	596	consensus Serine/threonine protein kinase [General	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.92
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.92
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.92
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.92
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.92
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.92
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.92
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.92
PTZ00036	440	glycogen synthase kinase; Provisional	99.92
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.91
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.91
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.91
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.91
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.91
PTZ00284	467	protein kinase; Provisional	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.91
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.91
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.91
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.91
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.91
PHA03209	357	serine/threonine kinase US3; Provisional	99.91
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.91
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.91
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.91
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.9
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.9
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.9
PHA03207	392	serine/threonine kinase US3; Provisional	99.9
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.9
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.9
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.9
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.9
PHA02988	283	hypothetical protein; Provisional	99.9
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.9
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.9
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.9
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.9
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.89
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.89
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.89
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.89
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.89
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.89
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.89
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.89
PHA02882	294	putative serine/threonine kinase; Provisional	99.89
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.89
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.89
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.89
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.89
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.89
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.89
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.89
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.89
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.89
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.89
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.89
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.89
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.89
PHA03211	461	serine/threonine kinase US3; Provisional	99.89
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.88
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.88
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.88
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.88
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.88
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.88
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.88
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.88
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.88
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.88
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.88
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.88
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.88
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.88
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.88
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.88
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.88
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.88
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.88
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.88
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.88
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.88
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.88
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.88
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.88
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.88
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.88
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.88
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.88
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.88
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.88
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.88
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.88
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.88
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.88
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.87
KOG1152	772	consensus Signal transduction serine/threonine kin	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.87
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.87
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.87
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.87
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.87
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.87
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.87
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.87
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.87
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.87
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.87
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.87
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.87
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.87
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.87
PHA03210	501	serine/threonine kinase US3; Provisional	99.87
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.87
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.87
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.87
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.87
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.87
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.87
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.87
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.87
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.87
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.87
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.87
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.87
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.87
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.87
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.87
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.87
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.86
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.86
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.86
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.86
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.86
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.86
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.86
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.86
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.86
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.86
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.86
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.86
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.86
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.86
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.86
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.86
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.86
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.86
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.86
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.86
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.86
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.86
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.86
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.86
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.86
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.86
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.86
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.86
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.85
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.85
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.85
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.85
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.85
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.85
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.85
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.85
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.85
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.85
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.85
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.85
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.84
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.84
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.84
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.84
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.84
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.84
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.84
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.84
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.84
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.83
PLN00009	294	cyclin-dependent kinase A; Provisional	99.83
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.83
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.83
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.83
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.83
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.83
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.83
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.83
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.83
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.83
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.82
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.82
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.82
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.82
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.82
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.82
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.82
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.82
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.82
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.82
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.82
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.81
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.81
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.81
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.81
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.81
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.8
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.8
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.8
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.78
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.78
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.77
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.77
KOG3653	534	consensus Transforming growth factor beta/activin	99.76
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.75
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.74
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.7
PRK09188	365	serine/threonine protein kinase; Provisional	99.7
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.69
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.67
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.66
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.63
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.63
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.61
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.59
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.57
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.57
smart00090	237	RIO RIO-like kinase.	99.52
PRK10345	210	hypothetical protein; Provisional	99.5
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.48
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.48
PRK12274	218	serine/threonine protein kinase; Provisional	99.46
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.41
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.4
PRK14879	211	serine/threonine protein kinase; Provisional	99.39
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.39
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.37
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.35
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.32
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.22
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.21
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.2
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.17
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.16
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.09
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.03
KOG3087	229	consensus Serine/threonine protein kinase [General	99.02
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.99
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.99
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.96
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.92
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.89
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.87
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.82
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.78
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.56
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.52
PRK09902	216	hypothetical protein; Provisional	98.48
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.47
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.46
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.31
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.3
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.25
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.12
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.89
COG4248	637	Uncharacterized protein with protein kinase and he	97.85
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.79
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.73
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.06
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.99
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.91
KOG1243	690	consensus Protein kinase [General function predict	96.71
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.65
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.46
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.29
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.07
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.99
COG2334	331	Putative homoserine kinase type II (protein kinase	95.75
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.61
PRK05231	319	homoserine kinase; Provisional	95.52
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.5
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.48
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.48
PRK06149	972	hypothetical protein; Provisional	95.27
PHA03111	444	Ser/Thr kinase; Provisional	95.16
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.12
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.98
PRK06148	1013	hypothetical protein; Provisional	94.84
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.65
PRK10271	188	thiK thiamine kinase; Provisional	94.54
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.43
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.35
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.31
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.25
PF01636	239	APH: Phosphotransferase enzyme family This family	94.06
PLN02236	344	choline kinase	93.92
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.73
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	93.71
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.51
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	93.32
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	93.05
KOG2268	465	consensus Serine/threonine protein kinase [Signal	92.98
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.88
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	92.58
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	92.24
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.98
PRK11768	325	serine/threonine protein kinase; Provisional	91.47
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	89.3
PRK09550	401	mtnK methylthioribose kinase; Reviewed	88.9
KOG2270	520	consensus Serine/threonine protein kinase involved	87.32
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	87.12
PLN02876	822	acyl-CoA dehydrogenase	86.98
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	86.36

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-38  Score=197.27  Aligned_cols=110  Identities=34%  Similarity=0.635  Sum_probs=101.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CC--ceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KS--FSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~--~~~~l~d~g~~~~~~~   77 (110)
                      ||||.||||.+++...+.+++..++.++.|++.|+++||+++|+||||||+||++.... ..  ..+||+|||+++.+.+
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP  167 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence            89999999999999999999999999999999999999999999999999999997642 22  6799999999999988


Q ss_pred             cccccccccccccccccccc-ccCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .....+.+|+|.|||||++. .+|+.++|+||+|
T Consensus       168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG  201 (429)
T KOG0595|consen  168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIG  201 (429)
T ss_pred             hhHHHHhhCCccccCHHHHHhccccchhhHHHHH
Confidence            77777889999999999997 6799999999987

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-35  Score=181.28  Aligned_cols=106  Identities=25%  Similarity=0.466  Sum_probs=97.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||.+|+|.+.++..++++|..+..++.+|+.|+.|||. .+|+|||+||+|+++   ..++.+||+|||.+..+.+. 
T Consensus       157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh-
Confidence            8999999999999999999999999999999999999995 899999999999999   45667999999999888766 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+..||..||+||.+.+ .|+.++|+||||
T Consensus       233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLG  264 (364)
T KOG0581|consen  233 IANTFVGTSAYMSPERISGESYSVKSDIWSLG  264 (364)
T ss_pred             hcccccccccccChhhhcCCcCCcccceeccc
Confidence            4467899999999999996 599999999998

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9e-35  Score=181.81  Aligned_cols=110  Identities=33%  Similarity=0.575  Sum_probs=99.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++||+|++.+...+.+.+...+.++.|++.|+.|||++||+||||||+||++..+.....+|++|||++........
T Consensus       255 lE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf  334 (475)
T KOG0615|consen  255 LEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF  334 (475)
T ss_pred             EEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence            79999999999999999999999999999999999999999999999999999998766667799999999998877677


Q ss_pred             cccccccccccccccccc--c--CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--N--YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~--~~~~~d~wslg  110 (110)
                      ..+.||||.|.|||++.+  .  +..++|+||+|
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG  368 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLG  368 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeecc
Confidence            788999999999999972  2  45689999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=179.02  Aligned_cols=107  Identities=29%  Similarity=0.471  Sum_probs=96.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-CCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-~~~~   79 (110)
                      +||+.||+|+.++.+++.|++..++.|+++|+.||.|||+.+|+|||+||+|||++..+.   ++++|||+|+.. ....
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH---i~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH---IKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc---EEEeccccchhcccCCC
Confidence            589999999999999999999999999999999999999999999999999999965554   999999999854 4445


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+.+||+.|+|||++.+ .|+..+|+||+|
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLG  212 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLG  212 (357)
T ss_pred             ccccccCCccccChHHHhcCCCCcccchHhHH
Confidence            5667899999999999985 599999999998

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=175.41  Aligned_cols=105  Identities=27%  Similarity=0.456  Sum_probs=96.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||.+||+|++++++.++|+++.++.+++||+.|++|+|+++|++||+||+||++++.+.   +|+.|||++......  
T Consensus       123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~---iKitDFGFAK~v~~r--  197 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH---IKITDFGFAKRVSGR--  197 (355)
T ss_pred             EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc---EEEEeccceEEecCc--
Confidence            799999999999999999999999999999999999999999999999999999965554   999999999887654  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..+.||||.|+|||++.. .|+.++|+||||
T Consensus       198 T~TlCGTPeYLAPEii~sk~ynkavDWWalG  228 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALG  228 (355)
T ss_pred             EEEecCCccccChHHhhcCCCCcchhHHHHH
Confidence            456799999999999985 599999999997

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-33  Score=178.26  Aligned_cols=108  Identities=38%  Similarity=0.652  Sum_probs=97.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-CCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-~~~~   79 (110)
                      ||||.||+|++++.+.+++.|..++.++.|+++|+.|||+++|+||||||+|++++.+.  ..+|++|||++... ....
T Consensus        99 mEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~~~~~~  176 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE--GNLKLSDFGLSAISPGEDG  176 (370)
T ss_pred             EEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC--CCEEEeccccccccCCCCC
Confidence            79999999999999999999999999999999999999999999999999999996431  56999999999887 4555


Q ss_pred             ccccccccccccccccccc-c-C-CCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-N-Y-GPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~-~-~~~~d~wslg  110 (110)
                      ...+.+|++.|+|||++.+ . | +.++|+||+|
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~G  210 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLG  210 (370)
T ss_pred             cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhH
Confidence            6678899999999999984 3 6 5789999997

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.7e-32  Score=176.50  Aligned_cols=106  Identities=35%  Similarity=0.625  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++||+|.+.+ ....++|.++..++.+++.||+|||.++|+|||||.+||++..+   +.+|++|||+|..+.... 
T Consensus       349 MEym~ggsLTDvV-t~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~---g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  349 MEYMEGGSLTDVV-TKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD---GSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             EeecCCCchhhhh-hcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC---CcEEEeeeeeeeccccccC
Confidence            8999999988866 44569999999999999999999999999999999999999544   449999999999886544 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+..|||+|||||++.. .|++++||||||
T Consensus       425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLG  456 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLG  456 (550)
T ss_pred             ccccccCCCCccchhhhhhcccCccccchhhh
Confidence            4456799999999999985 599999999998

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.1e-31  Score=173.92  Aligned_cols=107  Identities=31%  Similarity=0.539  Sum_probs=97.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      +|+|+.++|..+++..++++|.+++.++.||+.|+.|||+.+|+|||||..|+++   +....|||+|||++..+... .
T Consensus        97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen   97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence            5899999999999988999999999999999999999999999999999999999   44556999999999988744 5


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+.||||.|.|||++.+ ..+..+|+||+|
T Consensus       174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlG  205 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLG  205 (592)
T ss_pred             ccceecCCCcccChhHhccCCCCCchhhhhhh
Confidence            5567899999999999985 489999999998

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=4.7e-32  Score=163.54  Aligned_cols=107  Identities=31%  Similarity=0.573  Sum_probs=94.0

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH--cC--CeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHK--HG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~--~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      ||||.+|||.++++    ++..+++..+..++.|++.|+..||.  .+  ++||||||.||+++.   ++.+|++|||++
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~---~gvvKLGDfGL~  175 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA---NGVVKLGDFGLG  175 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC---CCceeeccchhH
Confidence            79999999999985    23569999999999999999999998  44  999999999999954   446999999999


Q ss_pred             eecCCccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           73 VFFRPREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++.+... ..+.+|||+||+||.+.+ .|+.++|+||+|
T Consensus       176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslG  215 (375)
T KOG0591|consen  176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLG  215 (375)
T ss_pred             hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHH
Confidence            99876554 356899999999999985 599999999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-32  Score=172.74  Aligned_cols=107  Identities=28%  Similarity=0.574  Sum_probs=93.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.+.+.|++.-++.|+++|+.|++|||++|||||||||+|||++.+   ..++|.|||.+..+.+...
T Consensus       153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~d---mhikITDFGsAK~l~~~~~  229 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKD---GHIKITDFGSAKILSPSQK  229 (604)
T ss_pred             EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCC---CcEEEeeccccccCChhhc
Confidence            6899999999999999999999999999999999999999999999999999999554   4599999998887643211


Q ss_pred             ------------c--cccccccccccccccccc-CCCccceeecC
Q 033837           81 ------------F--NELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        81 ------------~--~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                                  .  ...+||-.|.+||++... .++++|+|+||
T Consensus       230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlG  274 (604)
T KOG0592|consen  230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALG  274 (604)
T ss_pred             cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHH
Confidence                        1  346899999999999854 78999999997

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=9.8e-32  Score=176.04  Aligned_cols=107  Identities=35%  Similarity=0.580  Sum_probs=98.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+++|.|++++.+++++++..+.+++.||+.|+.|||..+|+|||+||+|++++..   ..+||+|||++........
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~---~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVK---NNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcc---cCEeeeccceeecccCCcc
Confidence            5899999999999999999999999999999999999999999999999999999543   3499999999988777777


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ..+.||+|.|++||++.+. | +.++|+||.|
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCG  199 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCG  199 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhH
Confidence            8889999999999999964 5 7899999987

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-31  Score=160.57  Aligned_cols=110  Identities=34%  Similarity=0.535  Sum_probs=99.2

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||+++||+|++.+...+  .|++.++..+++||..|+.|||+.+|.|||+||+|++......+..+|+.|||+++.-...
T Consensus       138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~  217 (400)
T KOG0604|consen  138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP  217 (400)
T ss_pred             eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence            79999999999998765  4999999999999999999999999999999999999987778888999999999876654


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ....+.+.||+|.|||++. ..|+..+|+||+|
T Consensus       218 ~~L~TPc~TPyYvaPevlg~eKydkscdmwSlg  250 (400)
T KOG0604|consen  218 GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLG  250 (400)
T ss_pred             ccccCCcccccccCHHHhCchhcCCCCCccchh
Confidence            5556678899999999997 5699999999997

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-30  Score=161.10  Aligned_cols=108  Identities=29%  Similarity=0.448  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-c
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-R   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~   78 (110)
                      |||+++|+|.+++.+.+ .+++..++.+++|++.|+.|+|+++++||||||+||+++..  +..+|++|||.+..... .
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC--CCeEEeccCcccccccccc
Confidence            79999999999998765 89999999999999999999999999999999999999652  34599999998876543 1


Q ss_pred             ---ccccccccccccccccccc-cc-CCCccceeecC
Q 033837           79 ---EQFNELVGSLYYMALEVLK-RN-YGPEVDVWSML  110 (110)
Q Consensus        79 ---~~~~~~~~~~~~~~pe~~~-~~-~~~~~d~wslg  110 (110)
                         .......||+.|+|||++. +. .++++|+||+|
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG  209 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG  209 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence               1123468999999999998 43 34599999998

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=9.5e-31  Score=164.93  Aligned_cols=107  Identities=37%  Similarity=0.665  Sum_probs=99.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||.++|+|++|+.+.+.+++..++.+++||.+|+.|||.++++||||+.+||++++   +..+|++|||++..+.....
T Consensus       132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~---N~NiKIADFGLSNly~~~kf  208 (668)
T KOG0611|consen  132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ---NNNIKIADFGLSNLYADKKF  208 (668)
T ss_pred             EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC---CCCeeeeccchhhhhccccH
Confidence            899999999999999999999999999999999999999999999999999999954   44599999999988888877


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ..++||+|.|.+||++.+. | ++.+|.||||
T Consensus       209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLG  240 (668)
T KOG0611|consen  209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLG  240 (668)
T ss_pred             HHHhcCCcccCCccccCCCCCCCCccchhhHH
Confidence            8889999999999999975 5 8899999997

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-31  Score=172.50  Aligned_cols=106  Identities=24%  Similarity=0.375  Sum_probs=92.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      |||+.||| ..++...+.|+++.++.|++.|+.||+|||+++||+||||.+||+++.++.   +||+|||+++..- ...
T Consensus       448 mey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh---~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  448 MEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH---VKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc---EEecccccccccCCCCC
Confidence            89999999 333334578999999999999999999999999999999999999976665   9999999998754 444


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+.+|||.|+|||++.+ .|+..+|+||||
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lG  555 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLG  555 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHH
Confidence            5667899999999999995 599999999997

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.4e-30  Score=156.11  Aligned_cols=107  Identities=33%  Similarity=0.589  Sum_probs=98.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +|.|+.|+|++++.+.-.+++...+.+++|+..|+.|+|.++|+||||||+||+++   ++-.++++|||++..+..+..
T Consensus       102 Fdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld---dn~~i~isDFGFa~~l~~Gek  178 (411)
T KOG0599|consen  102 FDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD---DNMNIKISDFGFACQLEPGEK  178 (411)
T ss_pred             hhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec---cccceEEeccceeeccCCchh
Confidence            47899999999999999999999999999999999999999999999999999994   455699999999999999888


Q ss_pred             cccccccccccccccccc-------cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-------NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-------~~~~~~d~wslg  110 (110)
                      ....||||.|+|||.+.+       .|+..+|+|++|
T Consensus       179 LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~G  215 (411)
T KOG0599|consen  179 LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACG  215 (411)
T ss_pred             HHHhcCCCcccChhheeeecccCCCCccchhhHHHHH
Confidence            888999999999999852       278899999987

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.1e-29  Score=162.19  Aligned_cols=106  Identities=31%  Similarity=0.581  Sum_probs=92.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +|||+. ||.-++... -.|++.+++.++.|++.|+.|||+++++|||||..|||++   ..+.+||+|||+++++....
T Consensus       197 FeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid---n~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID---NNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             Eecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc---CCCCEEeccccceeeccCCC
Confidence            589987 999988764 5899999999999999999999999999999999999994   45569999999999875443


Q ss_pred             --ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                        .....+-|.+|++||++.|  .|++.+|+||.|
T Consensus       273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~G  307 (560)
T KOG0600|consen  273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVG  307 (560)
T ss_pred             CcccccceEEeeccChHHhcCCcccccceeehhhh
Confidence              3455677999999999985  499999999987

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-29  Score=159.93  Aligned_cols=108  Identities=28%  Similarity=0.352  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcC-CeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHG-VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++|+|.+++.+  +..++...+..++-+|+.|+.|||+++ |+|||||++|++++.+.  ..+||+|||+++....
T Consensus       119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVI  196 (362)
T ss_pred             EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC--CEEEECCCccceeecc
Confidence            799999999999987  578999999999999999999999999 99999999999995432  3699999999987654


Q ss_pred             c-cccccccccccccccccccc---cCCCccceeecC
Q 033837           78 R-EQFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        78 ~-~~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      . .......||+.|+|||++.+   .|+.++|+||||
T Consensus       197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFg  233 (362)
T KOG0192|consen  197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFG  233 (362)
T ss_pred             ccccccCCCCCccccChhhhcCCCCcCCccchhhhHH
Confidence            3 22233688999999999983   399999999997

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.1e-30  Score=162.25  Aligned_cols=106  Identities=29%  Similarity=0.508  Sum_probs=95.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||.- .|+++++.+ ..|+++.++.|+.||++||+|+|.+|+.|||+||+||++..   ...+||+|||+++...+..
T Consensus        89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~---~~~iKiaDFGLARev~Skp  164 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG---NDVIKIADFGLAREVRSKP  164 (538)
T ss_pred             HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc---cceeEecccccccccccCC
Confidence            688875 899999765 56999999999999999999999999999999999999953   4469999999999998888


Q ss_pred             cccccccccccccccccc--ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                      ....++.|.+|+|||++.  +.|+.+.|+|++|
T Consensus       165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~G  197 (538)
T KOG0661|consen  165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVG  197 (538)
T ss_pred             CcchhhhcccccchHHhhhccccCCchHHHHHH
Confidence            888899999999999986  4599999999987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-29  Score=159.99  Aligned_cols=106  Identities=23%  Similarity=0.361  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||+.|+|.+++..  +..+...+...++.||++|++||+++++|||||..+|||+   +....+||+|||+++...+.
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d~  356 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGDD  356 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCCC
Confidence            799999999999986  4679999999999999999999999999999999999999   44557999999999954332


Q ss_pred             ccccccc---cccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELV---GSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~---~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      . .....   -...|.|||.+. +.|+.++|+||||
T Consensus       357 ~-Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFG  391 (468)
T KOG0197|consen  357 E-YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFG  391 (468)
T ss_pred             c-eeecCCCCCCceecCHHHHhhCCcccccceeehh
Confidence            2 21111   234599999998 6799999999998

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-29  Score=149.98  Aligned_cols=110  Identities=35%  Similarity=0.657  Sum_probs=100.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +|++.|++|..-+.+.--+++..+..+++||+.++.|||.++|+|||++|.|++++..+.+..+|++|||++..+.+...
T Consensus        89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence            47889999998887777788999999999999999999999999999999999999888888999999999999887777


Q ss_pred             ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .....|+|.|++||++. .+|+.++|+|+.|
T Consensus       169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cG  199 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACG  199 (355)
T ss_pred             cccccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence            78899999999999998 5699999999976

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=1.8e-29  Score=160.58  Aligned_cols=107  Identities=32%  Similarity=0.564  Sum_probs=96.0

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |+||+||++.+.++++  ..|++..+..|+.|++.|+.|||++.|+|||+|+.||+++.++.   +++.|||+++.+.+.
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~---VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK---VKLGDFGLAKILNPE  159 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc---eeecchhhhhhcCCc
Confidence            7999999999999754  56999999999999999999999999999999999999965443   799999999988776


Q ss_pred             c-ccccccccccccccccccc-cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . ...+..||+.|++||++.+ +|+.++|+||||
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLG  193 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLG  193 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCCCCCccCcchhhc
Confidence            5 4456789999999999995 699999999998

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.96  E-value=3.8e-29  Score=160.47  Aligned_cols=107  Identities=31%  Similarity=0.460  Sum_probs=92.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC---
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP---   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~---   77 (110)
                      |||++|||+..++.+.+.+++..+++|+++++.|+.-+|+.|+|||||||+|+|++..+   -+|++|||+|..+..   
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G---HiKLSDFGLs~gl~~~~~  296 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG---HIKLSDFGLSTGLDKKHR  296 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC---CEeeccccccchhhhhhh
Confidence            89999999999999999999999999999999999999999999999999999996554   499999998754210   


Q ss_pred             ---------------------ccc------------------------ccccccccccccccccccc-CCCccceeecC
Q 033837           78 ---------------------REQ------------------------FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        78 ---------------------~~~------------------------~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                                           ...                        ....+|||-|+|||++.++ |+..+|+||||
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                                 000                        0124789999999999865 99999999998

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=5.7e-29  Score=153.08  Aligned_cols=106  Identities=30%  Similarity=0.547  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKG----HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      +||+.. ||.+++...+    .++...++.++.|++.|+.|||+++|+||||||+|++++.   .+.+|++|||+++...
T Consensus        96 fe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~---~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen   96 FEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS---SGVLKLADFGLARAFS  171 (323)
T ss_pred             EEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC---CCcEeeeccchHHHhc
Confidence            466654 8888887544    5777899999999999999999999999999999999954   5569999999998765


Q ss_pred             -Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 -PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 -~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       +.........|.+|+|||++.+  .|++.+||||+|
T Consensus       172 ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~G  208 (323)
T KOG0594|consen  172 IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLG  208 (323)
T ss_pred             CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHH
Confidence             3333555688999999999974  499999999987

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.95  E-value=4.8e-29  Score=151.82  Aligned_cols=106  Identities=23%  Similarity=0.573  Sum_probs=91.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Cc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~   78 (110)
                      +|||.. ++.+.+... ..+++..++.++.|++.|+.|||+++++|||+||+||++++   ++.+|++|||+++.+. +.
T Consensus        80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~---~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ---NGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec---CCcEEeccchhhHhhcCCc
Confidence            588986 666666544 56999999999999999999999999999999999999965   4459999999999887 55


Q ss_pred             cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+..|.+|+|||.+.+  +|++++||||+|
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiG  189 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIG  189 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccchhhh
Confidence            56667889999999999986  499999999987

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.95  E-value=1.4e-28  Score=156.55  Aligned_cols=107  Identities=25%  Similarity=0.412  Sum_probs=90.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..+.... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~---~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS---KGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC---CCCEEEeeccCccccccccc
Confidence            799999999999988889999999999999999999999999999999999999954   3459999999876432110 


Q ss_pred             -----------------------------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -----------------------------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -----------------------------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                         .....+||+.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG  223 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG  223 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence                                               0012468999999999874 489999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.95  E-value=5.8e-29  Score=153.67  Aligned_cols=107  Identities=23%  Similarity=0.328  Sum_probs=94.2

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||++. +|.+.++.    +.+++.-.++-++-|+..|+.|||+.+|+||||||+|++++.+  .+.+|++|||.++.+.
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~--tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD--TGVLKICDFGSAKVLV  177 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC--CCeEEeccCCcceeec
Confidence            689986 88888874    5778889999999999999999999999999999999999743  4579999999999887


Q ss_pred             Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......++..|.+|+|||.+.+  .|+.+.|+||.|
T Consensus       178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaG  213 (364)
T KOG0658|consen  178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAG  213 (364)
T ss_pred             cCCCceeEEEeccccCHHHHcCccccCceeEEhhhh
Confidence            7666677788999999999974  499999999987

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=4.2e-28  Score=152.23  Aligned_cols=107  Identities=26%  Similarity=0.374  Sum_probs=91.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~---~~~~kl~DfG~a~~~~~~~~  150 (323)
T cd05571          74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK---DGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC---CCCEEEeeCCCCcccccCCC
Confidence            799999999999988889999999999999999999999999999999999999954   34599999998865322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  182 (323)
T cd05571         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  182 (323)
T ss_pred             cccceecCccccChhhhcCCCCCccccCcccc
Confidence            2234578999999999974 489999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.95  E-value=7.5e-29  Score=152.46  Aligned_cols=106  Identities=25%  Similarity=0.421  Sum_probs=92.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||+. ||.+.+..- ++|...+++.++.|++.|++|||.+.|+|||||++|+++.   ..+.+|++|||+++.+....
T Consensus       156 Me~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             HHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhcCCc
Confidence            789987 999988764 5899999999999999999999999999999999999994   45569999999999987654


Q ss_pred             c-cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . .....-|.+|+|||++.+  .|++++||||+|
T Consensus       232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvG  265 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVG  265 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCCcccCcchhhhhHH
Confidence            3 445677999999999985  499999999987

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.3e-29  Score=157.09  Aligned_cols=107  Identities=24%  Similarity=0.406  Sum_probs=96.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      |||+.||||..++.+-++|.++.++.++++|+.|+-+||+++||+|||+.+|++++.++.   +|+.|||++...- ...
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH---iKi~DFGmcKEni~~~~  505 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH---IKIADFGMCKENIFDGV  505 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc---eEeeecccccccccCCc
Confidence            899999999999999899999999999999999999999999999999999999976554   9999999997643 333


Q ss_pred             cccccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...+.+|||-|+|||++. .+|+.++|+||+|
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~G  537 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG  537 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHH
Confidence            456689999999999998 5699999999987

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=160.33  Aligned_cols=107  Identities=27%  Similarity=0.438  Sum_probs=96.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||..|.|...|+.+..+++..++.|..+|+.|+.|||...|||||||..||++..++   .|||+|||-++.+.....
T Consensus       191 MEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d---~VKIsDFGTS~e~~~~ST  267 (904)
T KOG4721|consen  191 MEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD---VVKISDFGTSKELSDKST  267 (904)
T ss_pred             eeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc---eEEeccccchHhhhhhhh
Confidence            89999999999999999999999999999999999999999999999999999996544   499999999887766544


Q ss_pred             ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .-.++||..|||||++. .+++.++||||||
T Consensus       268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfG  298 (904)
T KOG4721|consen  268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFG  298 (904)
T ss_pred             hhhhhhhHhhhCHHHhhcCCcccccceehhH
Confidence            44578999999999998 4589999999998

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=5.7e-28  Score=153.94  Aligned_cols=109  Identities=51%  Similarity=0.882  Sum_probs=98.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC-CceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK-SFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~-~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||+|.||+|++.+.+. .+++..+..++.|++.++.|||+.+++|||++|+|+++..... ...++++|||++.......
T Consensus       115 mEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~  193 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE  193 (382)
T ss_pred             EEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence            7999999999999877 5999999999999999999999999999999999999975443 4579999999998887755


Q ss_pred             cccccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++. ..|+..+|+||+|
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~G  225 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIG  225 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHH
Confidence            567789999999999998 5799999999987

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-27  Score=149.95  Aligned_cols=107  Identities=29%  Similarity=0.423  Sum_probs=91.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~---~~~~kl~Dfg~a~~~~~~~~  151 (330)
T cd05586          75 TDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA---TGHIALCDFGLSKANLTDNK  151 (330)
T ss_pred             EcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEecCCcCcCCCCCCC
Confidence            699999999999988889999999999999999999999999999999999999954   34599999998765322 22


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+  .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslG  184 (330)
T cd05586         152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLG  184 (330)
T ss_pred             CccCccCCccccCHHHHcCCCCCCCccceeccc
Confidence            2334578999999999863  378899999998

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=1.4e-27  Score=151.81  Aligned_cols=107  Identities=24%  Similarity=0.420  Sum_probs=90.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..+.... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~---~~~vkL~DfG~~~~~~~~~~  156 (360)
T cd05627          80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA---KGHVKLSDFGLCTGLKKAHR  156 (360)
T ss_pred             EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC---CCCEEEeeccCCcccccccc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999876432110 


Q ss_pred             -----------------------------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -----------------------------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -----------------------------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                         ......|++.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG  223 (360)
T cd05627         157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG  223 (360)
T ss_pred             cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence                                               0112468899999999874 489999999998

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.2e-27  Score=148.35  Aligned_cols=107  Identities=25%  Similarity=0.410  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++...... .
T Consensus        72 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~---~~~~kl~Dfg~~~~~~~~~~  148 (312)
T cd05585          72 LAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY---QGHIALCDFGLCKLNMKDDD  148 (312)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC---CCcEEEEECcccccCccCCC
Confidence            699999999999988888999999999999999999999999999999999999953   445999999988654322 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  180 (312)
T cd05585         149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLG  180 (312)
T ss_pred             ccccccCCcccCCHHHHcCCCCCCccceechh
Confidence            2234578999999999875 488999999998

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=2.5e-27  Score=148.85  Aligned_cols=107  Identities=26%  Similarity=0.383  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-R   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~   78 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+ .+++||||+|+||+++.   ...++++|||++..... .
T Consensus        74 ~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~---~~~~kL~Dfg~~~~~~~~~  150 (325)
T cd05594          74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDG  150 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC---CCCEEEecCCCCeecCCCC
Confidence            7999999999999888889999999999999999999997 79999999999999954   34599999998765322 2


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......|++.|+|||++.+ .++.++|+||||
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (325)
T cd05594         151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  183 (325)
T ss_pred             cccccccCCcccCCHHHHccCCCCCcccccccc
Confidence            22234568899999999874 589999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.2e-29  Score=156.01  Aligned_cols=107  Identities=24%  Similarity=0.481  Sum_probs=95.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.||++.+.+..+..+.+..+..++++++.|+.|+|..+.+|||+++.||++...   +.+|+.|||++..++....
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc---CcEEEEecceeeeeechhh
Confidence            7999999999999888888999999999999999999999999999999999999654   4599999999988765433


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ..+..|||+|||||++.+ .|+.++|+||||
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLG  198 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLG  198 (467)
T ss_pred             ccccccccccccchhhhccccccchhhhhhhh
Confidence             366899999999999986 599999999998

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=1.9e-27  Score=149.62  Aligned_cols=107  Identities=24%  Similarity=0.368  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.....+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        74 ~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~---~~~~kL~DfG~~~~~~~~~~  150 (328)
T cd05593          74 MEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK---DGHIKITDFGLCKEGITDAA  150 (328)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC---CCcEEEecCcCCccCCCccc
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998765322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  182 (328)
T cd05593         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  182 (328)
T ss_pred             ccccccCCcCccChhhhcCCCCCccCCccccc
Confidence            2233568899999999874 589999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=1.6e-27  Score=149.63  Aligned_cols=107  Identities=23%  Similarity=0.353  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+.+...+.+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---~~~~kL~DfG~~~~~~~~~~  156 (323)
T cd05616          80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENMWDGV  156 (323)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC---CCcEEEccCCCceecCCCCC
Confidence            699999999999988888999999999999999999999999999999999999954   34599999998865432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  188 (323)
T cd05616         157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG  188 (323)
T ss_pred             ccccCCCChhhcCHHHhcCCCCCCccchhchh
Confidence            2234568899999999974 589999999998

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=151.38  Aligned_cols=107  Identities=26%  Similarity=0.454  Sum_probs=90.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..+.....
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~~~  156 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA---KGHIKLSDFGLCTGLKKSHR  156 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEeecccceecccccc
Confidence            799999999999988888999999999999999999999999999999999999954   44599999998765422110


Q ss_pred             ---------------------------------------cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ---------------------------------------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ---------------------------------------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                             .....||+.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  226 (364)
T cd05599         157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG  226 (364)
T ss_pred             ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence                                                   012358899999999874 589999999998

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.95  E-value=1.7e-27  Score=149.92  Aligned_cols=107  Identities=22%  Similarity=0.390  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      ||||++|+|.+++.+.+++++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++.... ...
T Consensus        75 ~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~~~~~~~~~~  151 (329)
T cd05588          75 IEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGD  151 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEECcCccccccccCCC
Confidence            799999999999988889999999999999999999999999999999999999954   3459999999876432 222


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (329)
T cd05588         152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALG  183 (329)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceechH
Confidence            2334578999999999975 488999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.5e-28  Score=165.10  Aligned_cols=107  Identities=27%  Similarity=0.401  Sum_probs=94.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      |||++||||..++.+-.++++.-+++|++.|+.||.-+|+.|.+|||+||+||+++..   +-+|++|||.|..+. ++.
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~---GHikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS---GHIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc---CcEeeccchhHHhcCCCCc
Confidence            8999999999999888899999999999999999999999999999999999999544   459999999887765 333


Q ss_pred             c-ccccccccccccccccc------ccCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      . ....+|||-|.+||++.      +.|++.+|+||+|
T Consensus       231 V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlG  268 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLG  268 (1317)
T ss_pred             EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhH
Confidence            2 33468999999999984      3489999999998

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-27  Score=151.49  Aligned_cols=107  Identities=31%  Similarity=0.524  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..+.... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~---~~~~kl~DfGla~~~~~~~~  156 (377)
T cd05629          80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR---GGHIKLSDFGLSTGFHKQHD  156 (377)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC---CCCEEEeecccccccccccc
Confidence            699999999999988888999999999999999999999999999999999999954   3459999999875321100 


Q ss_pred             ------------c-----------------------------------cccccccccccccccccc-cCCCccceeecC
Q 033837           80 ------------Q-----------------------------------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ------------~-----------------------------------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                  .                                   .....|++.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  235 (377)
T cd05629         157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG  235 (377)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence                        0                                   001358889999999874 589999999998

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=2.5e-27  Score=151.60  Aligned_cols=107  Identities=32%  Similarity=0.492  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|+|+++|+||||||+||+++.   ...++++|||++..+...  
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~---~g~~kL~DFGla~~~~~~~~  156 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR---DGHIKLTDFGLCTGFRWTHD  156 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEEeECCCCcccccccc
Confidence            799999999999988888999999999999999999999999999999999999954   345999999986432100  


Q ss_pred             ----------------------------------------------cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 ----------------------------------------------EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ----------------------------------------------~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                                    .......||+.|+|||++.+ .++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (382)
T cd05625         157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  235 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence                                                          00012368899999999874 589999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.95  E-value=2e-27  Score=148.87  Aligned_cols=107  Identities=28%  Similarity=0.415  Sum_probs=91.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+++...+.+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++...... .
T Consensus        75 ~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~---~~~~kL~Dfg~a~~~~~~~~  151 (316)
T cd05592          75 MEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK---DGHIKIADFGMCKENMNGEG  151 (316)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC---CCCEEEccCcCCeECCCCCC
Confidence            799999999999988888999999999999999999999999999999999999954   345999999988764322 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  183 (316)
T cd05592         152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFG  183 (316)
T ss_pred             ccccccCCccccCHHHHcCCCCCCcccchhHH
Confidence            2234578999999999875 488999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=2.6e-27  Score=149.03  Aligned_cols=107  Identities=25%  Similarity=0.435  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++|+|.+++.+...+++.++..++.|++.|+.|||+++++||||+|+||+++.+   ..++++|||++....... 
T Consensus        84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~---~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE---GHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC---CCEEEeeCcCCccccccCC
Confidence            6999999999999888889999999999999999999999999999999999999543   459999999887643322 


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......|++.|+|||.+.+  .++.++|+||||
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  194 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLG  194 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccch
Confidence             1223568999999999874  368899999998

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=2.1e-27  Score=149.35  Aligned_cols=107  Identities=22%  Similarity=0.389  Sum_probs=91.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.+   ..++++|||++.... ...
T Consensus        75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~  151 (327)
T cd05617          75 IEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD---GHIKLTDYGMCKEGLGPGD  151 (327)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC---CCEEEeccccceeccCCCC
Confidence            7999999999999888889999999999999999999999999999999999999643   359999999886532 222


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (327)
T cd05617         152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALG  183 (327)
T ss_pred             ceecccCCcccCCHHHHCCCCCCchheeehhH
Confidence            2334578999999999874 588999999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.95  E-value=2.1e-27  Score=149.12  Aligned_cols=107  Identities=23%  Similarity=0.356  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++...+.+++.++..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05587          80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGK  156 (324)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC---CCCEEEeecCcceecCCCCC
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998765322 12


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  188 (324)
T cd05587         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFG  188 (324)
T ss_pred             ceeeecCCccccChhhhcCCCCCcccchhhhH
Confidence            2234568999999999975 488999999997

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.95  E-value=3.4e-27  Score=148.53  Aligned_cols=107  Identities=21%  Similarity=0.360  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|..++.....+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~---~~~~kL~DfG~~~~~~~~~~  151 (329)
T cd05618          75 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD  151 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC---CCCEEEeeCCccccccCCCC
Confidence            699999999999988888999999999999999999999999999999999999954   34599999998865322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (329)
T cd05618         152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALG  183 (329)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceeccc
Confidence            2234578899999999975 488899999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=1.6e-27  Score=149.64  Aligned_cols=107  Identities=26%  Similarity=0.390  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|..++.....+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        74 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~~~~~~~~~~  150 (323)
T cd05595          74 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC---CCCEEecccHHhccccCCCC
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998765322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  182 (323)
T cd05595         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  182 (323)
T ss_pred             ccccccCCcCcCCcccccCCCCCchhchhhhH
Confidence            2233568899999999874 588999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.9e-27  Score=148.92  Aligned_cols=105  Identities=35%  Similarity=0.470  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++.....  .
T Consensus        80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kL~Dfg~a~~~~~--~  154 (333)
T cd05600          80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIVT--Y  154 (333)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCCEEEEeCcCCccccc--c
Confidence            689999999999988888999999999999999999999999999999999999954   44599999998875533  2


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+ .++.++|+||||
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  185 (333)
T cd05600         155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLG  185 (333)
T ss_pred             cCCcccCccccChhHhcCCCCCCccceecch
Confidence            234578899999999874 588999999998

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=3.4e-27  Score=150.64  Aligned_cols=107  Identities=31%  Similarity=0.489  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++|+||||+|+||+++.   ...++++|||++..+...  
T Consensus        80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~---~~~ikL~DFG~a~~~~~~~~  156 (376)
T cd05598          80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR---DGHIKLTDFGLCTGFRWTHD  156 (376)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC---CCCEEEEeCCCCcccccccc
Confidence            799999999999988888999999999999999999999999999999999999954   345999999986422100  


Q ss_pred             ------------------------------------------cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 ------------------------------------------EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ------------------------------------------~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                                .......|++.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  231 (376)
T cd05598         157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  231 (376)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecc
Confidence                                                      00012368899999999975 488999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.95  E-value=3e-27  Score=151.20  Aligned_cols=107  Identities=30%  Similarity=0.465  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+.+++||||||+||+++.   ...++++|||++..+.... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~---~~~~kL~DFGl~~~~~~~~~  156 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL---DGHIKLTDFGLCTGFRWTHN  156 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC---CCCEEEeeCcCCcccccccc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999865321000 


Q ss_pred             -----------------------------------------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -----------------------------------------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -----------------------------------------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                                     ......||+.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (381)
T cd05626         157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG  235 (381)
T ss_pred             cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence                                                           0012468899999999874 488999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=3.5e-27  Score=147.90  Aligned_cols=107  Identities=24%  Similarity=0.360  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      ||||++|+|...+.....+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~~  151 (321)
T cd05603          75 LDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGVEPEE  151 (321)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEccCCCCccCCCCCC
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998765322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (321)
T cd05603         152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLG  183 (321)
T ss_pred             ccccccCCcccCCHHHhcCCCCCCcCcccccc
Confidence            2233568899999999874 488899999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=2.8e-27  Score=148.59  Aligned_cols=107  Identities=24%  Similarity=0.346  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+++.....+.+..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++...... .
T Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~---~~~~kl~DfG~a~~~~~~~~  151 (325)
T cd05602          75 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNG  151 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEEccCCCCcccccCCC
Confidence            699999999999988888999999999999999999999999999999999999954   345999999988654222 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (325)
T cd05602         152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG  183 (325)
T ss_pred             CcccccCCccccCHHHHcCCCCCCcccccccc
Confidence            2234568999999999875 488999999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2e-27  Score=150.41  Aligned_cols=107  Identities=29%  Similarity=0.498  Sum_probs=90.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |.||.+|++.+.++..  ..+.|..+..++++++.||.|||.+|-||||+|+.||+++.   .+.||++|||.+..+-..
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~---dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS---DGTVKLADFGVSASLFDS  179 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC---CCcEEEcCceeeeeeccc
Confidence            6789999999999764  34999999999999999999999999999999999999954   455999999988776432


Q ss_pred             cc-----cccccccccccccccccc---cCCCccceeecC
Q 033837           79 EQ-----FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-----~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ..     +....|+++|+|||++..   .|+.++||||||
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfG  219 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFG  219 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhh
Confidence            21     134589999999999652   399999999998

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.94  E-value=3.8e-27  Score=147.90  Aligned_cols=107  Identities=24%  Similarity=0.358  Sum_probs=91.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++...... .
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~---~~~~kl~Dfg~~~~~~~~~~  151 (323)
T cd05575          75 LDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSK  151 (323)
T ss_pred             EcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC---CCcEEEeccCCCcccccCCC
Confidence            799999999999988888999999999999999999999999999999999999954   345999999987653222 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  183 (323)
T cd05575         152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLG  183 (323)
T ss_pred             ccccccCChhhcChhhhcCCCCCccccccccc
Confidence            2233568899999999874 488999999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=2.9e-27  Score=148.37  Aligned_cols=107  Identities=26%  Similarity=0.395  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~---~~~~kL~DfG~~~~~~~~~~  151 (320)
T cd05590          75 MEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCKEGIFNGK  151 (320)
T ss_pred             EcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC---CCcEEEeeCCCCeecCcCCC
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998765322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (320)
T cd05590         152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMG  183 (320)
T ss_pred             cccccccCccccCHHHHcCCCCCCccchhhhH
Confidence            2234568999999999874 488999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.94  E-value=3.9e-27  Score=147.94  Aligned_cols=107  Identities=23%  Similarity=0.365  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|..++.+...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++...... .
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~---~~~~kL~DfG~~~~~~~~~~  151 (325)
T cd05604          75 LDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS---QGHVVLTDFGLCKEGIAQSD  151 (325)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEEeecCCcccCCCCCC
Confidence            799999999999988889999999999999999999999999999999999999954   345999999987653222 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  183 (325)
T cd05604         152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLG  183 (325)
T ss_pred             CcccccCChhhCCHHHHcCCCCCCcCcccccc
Confidence            2234568899999999874 588999999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.94  E-value=3.2e-27  Score=154.22  Aligned_cols=105  Identities=28%  Similarity=0.463  Sum_probs=89.2

Q ss_pred             CCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            2 KLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         2 e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |.++ -+|.++++..  ..++...++.++.||+.+|.+||..+|||+||||+|||+...+ +..+|++|||.+.......
T Consensus       268 ELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~~~q~v  345 (586)
T KOG0667|consen  268 ELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSCFESQRV  345 (586)
T ss_pred             hhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecccccccCCcc
Confidence            4444 3899999865  4689999999999999999999999999999999999996543 3479999999887754433


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        ..++.+.+|+|||++.| +|+.+.||||||
T Consensus       346 --ytYiQSRfYRAPEVILGlpY~~~IDmWSLG  375 (586)
T KOG0667|consen  346 --YTYIQSRFYRAPEVILGLPYDTAIDMWSLG  375 (586)
T ss_pred             --eeeeeccccccchhhccCCCCCccceeehh
Confidence              36788999999999985 699999999998

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=3.7e-27  Score=149.00  Aligned_cols=105  Identities=22%  Similarity=0.376  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++......  
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~---~~~ikL~DFG~a~~~~~~--  184 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK---DGFIKMTDFGFAKVVDTR--  184 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC---CCCEEEecCCCCeecCCC--
Confidence            699999999999988889999999999999999999999999999999999999953   445999999988765332  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+ .++.++|+||+|
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  215 (340)
T PTZ00426        185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLG  215 (340)
T ss_pred             cceecCChhhcCHHHHhCCCCCccccccchh
Confidence            234578899999999875 488999999998

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=5e-27  Score=147.26  Aligned_cols=107  Identities=26%  Similarity=0.405  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++|+|...+.+...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++....... 
T Consensus        75 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~---~~~~kL~Dfg~~~~~~~~~~  151 (321)
T cd05591          75 MEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA---EGHCKLADFGMCKEGILNGV  151 (321)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEeecccceecccCCc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999886543222 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  183 (321)
T cd05591         152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALG  183 (321)
T ss_pred             cccccccCccccCHHHHcCCCCCCccceechh
Confidence            2233568899999999874 589999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=3.7e-27  Score=147.63  Aligned_cols=107  Identities=26%  Similarity=0.370  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++...+.+++.++..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05620          75 MEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR---DGHIKIADFGMCKENVFGDN  151 (316)
T ss_pred             ECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEeCccCCCeecccCCC
Confidence            799999999999988888999999999999999999999999999999999999954   34599999998764322 12


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  183 (316)
T cd05620         152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFG  183 (316)
T ss_pred             ceeccCCCcCccCHHHHcCCCCCcccchhhhH
Confidence            2234568899999999985 489999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.94  E-value=5.1e-27  Score=147.72  Aligned_cols=105  Identities=28%  Similarity=0.456  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+.+.+.+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++....... 
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~-  172 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKVPDRT-  172 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC---CCCEEEeeccCceEcCCCc-
Confidence            699999999999988889999999999999999999999999999999999999954   3459999999887654322 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ....|++.|+|||.+.+ .++.++|+||||
T Consensus       173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  202 (329)
T PTZ00263        173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMG  202 (329)
T ss_pred             -ceecCChhhcCHHHHcCCCCCCcceeechH
Confidence             23568899999999975 478899999997

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=3.6e-27  Score=148.09  Aligned_cols=107  Identities=23%  Similarity=0.376  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++|+|.+++.+.+.+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++....... 
T Consensus        80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~---~~~ikL~Dfg~~~~~~~~~~  156 (323)
T cd05615          80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGV  156 (323)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEeccccccccCCCCc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999886543222 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  188 (323)
T cd05615         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYG  188 (323)
T ss_pred             cccCccCCccccCHHHHcCCCCCCccchhhhH
Confidence            2233568899999999874 588999999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.2e-27  Score=156.82  Aligned_cols=108  Identities=30%  Similarity=0.432  Sum_probs=95.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHY--TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ||-++||+|.+.+..+ +++  ++.....|..||+.|+.|||.+.|+|||||.+|+++.  ..++.+|++|||-++.+..
T Consensus       651 MEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAg  728 (1226)
T KOG4279|consen  651 MEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAG  728 (1226)
T ss_pred             eecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhcc
Confidence            7888999999999876 777  8999999999999999999999999999999999995  4567899999999988765


Q ss_pred             ccc-ccccccccccccccccc-cc--CCCccceeecC
Q 033837           78 REQ-FNELVGSLYYMALEVLK-RN--YGPEVDVWSML  110 (110)
Q Consensus        78 ~~~-~~~~~~~~~~~~pe~~~-~~--~~~~~d~wslg  110 (110)
                      ... ..+..||..|||||++. |+  |+.++|+||||
T Consensus       729 inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~G  765 (1226)
T KOG4279|consen  729 INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFG  765 (1226)
T ss_pred             CCccccccccchhhhChHhhccCCcCCCchhhhhhcc
Confidence            443 45578999999999996 43  99999999998

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.5e-27  Score=147.65  Aligned_cols=107  Identities=32%  Similarity=0.522  Sum_probs=91.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~---~~~~kL~Dfg~~~~~~~~~~  156 (350)
T cd05573          80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA---DGHIKLADFGLCKKMNKAKD  156 (350)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEeecCCCCccCcccCc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999887654322 


Q ss_pred             -----------------------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -----------------------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -----------------------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                   ......|++.|+|||++.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  217 (350)
T cd05573         157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLG  217 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecc
Confidence                                         1223468899999999975 489999999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.94  E-value=9.1e-27  Score=148.63  Aligned_cols=106  Identities=29%  Similarity=0.451  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.. ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++........
T Consensus       122 ~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~---~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         122 MEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK---HGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC---CCCEEEEecccceecccCCc
Confidence            799999999998854 46889999999999999999999999999999999999954   34599999999876543222


Q ss_pred             --cccccccccccccccccc-----cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-----NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-----~~~~~~d~wslg  110 (110)
                        .....|++.|+|||++.+     .++.++|+||+|
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeeh
Confidence              234578999999999853     267899999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-27  Score=156.78  Aligned_cols=107  Identities=23%  Similarity=0.476  Sum_probs=93.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      +|||.||.....+..- ..+++.++..++.|++.|+.|||+++||||||+.-||+++.+++   ++++|||.+...... 
T Consensus       108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd---irLADFGVSAKn~~t~  184 (1187)
T KOG0579|consen  108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD---IRLADFGVSAKNKSTR  184 (1187)
T ss_pred             EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc---EeeecccccccchhHH
Confidence            4899999999988765 56999999999999999999999999999999999999987666   999999998766443 


Q ss_pred             ccccccccccccccccccc------ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      ....+++|||+|||||++.      .+|++++|+||||
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlG  222 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLG  222 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCchhhhhHHhhh
Confidence            3345689999999999885      2489999999998

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=5.9e-27  Score=144.80  Aligned_cols=107  Identities=23%  Similarity=0.351  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++...  ..+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++......
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD---RGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC---CCCEEEeeCCCcEEcCCC
Confidence            6899999999887543  46899999999999999999999999999999999999953   345999999998775443


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......|++.|+|||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG  188 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLG  188 (285)
T ss_pred             CeecCCCCCCCccCHhhhcCCCCCcccCchhHH
Confidence            33344578899999999974 589999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.5e-28  Score=152.42  Aligned_cols=107  Identities=27%  Similarity=0.374  Sum_probs=95.7

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |..|.||||.-++.+-+  .|++..++.|+++|+-|+++||..+|++||+||+||+++   +.+.++|+|+|++..+...
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCCeEeeccceEEecCCC
Confidence            35688999999886544  699999999999999999999999999999999999995   4455999999999998887


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......||..|||||+++ +.|+.++|+||+|
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lG  373 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLG  373 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHH
Confidence            7777789999999999998 5699999999997

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.1e-26  Score=145.78  Aligned_cols=107  Identities=29%  Similarity=0.445  Sum_probs=91.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+.+.+.+.+.+..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++...... .
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  155 (323)
T cd05584          79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGT  155 (323)
T ss_pred             EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEeeCcCCeecccCCC
Confidence            689999999999988888999999999999999999999999999999999999954   345999999987654222 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  187 (323)
T cd05584         156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLG  187 (323)
T ss_pred             cccccCCCccccChhhccCCCCCCcceecccH
Confidence            2233568899999999874 478899999997

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.3e-26  Score=145.17  Aligned_cols=107  Identities=26%  Similarity=0.401  Sum_probs=91.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++|+|.+++.+...+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+...... .
T Consensus        77 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kL~Dfg~~~~~~~~~~  153 (318)
T cd05582          77 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE---EGHIKLTDFGLSKESIDHEK  153 (318)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC---CCcEEEeeccCCcccCCCCC
Confidence            699999999999988888999999999999999999999999999999999999954   345999999988665433 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|++||.+.+ .++.++|+||||
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  185 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG  185 (318)
T ss_pred             ceecccCChhhcCHHHHcCCCCCCccceeccc
Confidence            2234568889999999974 478899999998

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.5e-27  Score=145.75  Aligned_cols=105  Identities=27%  Similarity=0.430  Sum_probs=90.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||++......  
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~---~~~~kl~Dfg~~~~~~~~--  154 (291)
T cd05612          80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK---EGHIKLTDFGFAKKLRDR--  154 (291)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEEEecCcchhccCC--
Confidence            689999999999988888999999999999999999999999999999999999954   345999999988765332  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....|++.|+|||.+.+ .++.++|+||||
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  185 (291)
T cd05612         155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALG  185 (291)
T ss_pred             cccccCChhhcCHHHHcCCCCCchhhHHHHH
Confidence            123468899999999875 478899999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=8.2e-27  Score=146.38  Aligned_cols=107  Identities=26%  Similarity=0.441  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-   77 (110)
                      ||||+||||...+.++  ..|++..++.|+++|+.||+|||-.||++|||||+|||+.+++.   +-++||.++..... 
T Consensus       156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH---IMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH---IMLSDFDLSLRCPVS  232 (459)
T ss_pred             EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc---EEeeeccccccCCCC
Confidence            8999999999999766  56999999999999999999999999999999999999966554   88888875432100 


Q ss_pred             --------------------------------c-c-----------------------cccccccccccccccccccc-C
Q 033837           78 --------------------------------R-E-----------------------QFNELVGSLYYMALEVLKRN-Y  100 (110)
Q Consensus        78 --------------------------------~-~-----------------------~~~~~~~~~~~~~pe~~~~~-~  100 (110)
                                                      . .                       .....+||-.|+|||++.+. .
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                            0 0                       00124678889999999976 7


Q ss_pred             CCccceeecC
Q 033837          101 GPEVDVWSML  110 (110)
Q Consensus       101 ~~~~d~wslg  110 (110)
                      +.++|+|+||
T Consensus       313 gsAVDWWtfG  322 (459)
T KOG0610|consen  313 GSAVDWWTFG  322 (459)
T ss_pred             CchhhHHHHH
Confidence            8999999997

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=1.9e-26  Score=145.19  Aligned_cols=107  Identities=24%  Similarity=0.449  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+ ...+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++.......
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM---NGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC---CCCEEEEeccceeeccCCC
Confidence            799999999999976 468999999999999999999999999999999999999954   3459999999887654322


Q ss_pred             cc--ccccccccccccccccc------cCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLKR------NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~~------~~~~~~d~wslg  110 (110)
                      ..  ....|++.|+|||++.+      .++.++|+||+|
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlG  195 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG  195 (331)
T ss_pred             ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeee
Confidence            21  22468899999998852      378899999998

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=6.2e-27  Score=140.24  Aligned_cols=106  Identities=27%  Similarity=0.432  Sum_probs=90.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||++. ||...++.. -.+.+.+++.|+.+++.|+.|||++.|+|||+||.|+++.   ..+.+|++|||+++.+.+..
T Consensus        80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCC
Confidence            478875 888888755 5699999999999999999999999999999999999995   44569999999999886544


Q ss_pred             c-cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . .....-|.+|+|||.+.|  .|+..+||||.|
T Consensus       156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavG  189 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVG  189 (318)
T ss_pred             cccccceeeeeccChHHhccchhcCCcchhhhHH
Confidence            3 223467889999999974  499999999987

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=2.3e-26  Score=146.81  Aligned_cols=106  Identities=30%  Similarity=0.456  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.. ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++........
T Consensus       122 ~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~---~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         122 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC---CCCEEEEeCCceeEcCcCCc
Confidence            799999999998864 45889999999999999999999999999999999999954   34599999999876543221


Q ss_pred             --cccccccccccccccccc-----cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-----NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-----~~~~~~d~wslg  110 (110)
                        .....||+.|+|||++.+     .++.++|+||||
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlG  234 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehh
Confidence              234578999999999862     277899999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.94  E-value=1.5e-26  Score=152.57  Aligned_cols=110  Identities=25%  Similarity=0.435  Sum_probs=98.3

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~~~   76 (110)
                      ||||++|||...+.+.   ..+++.++..++..+..|+.|||.++|+||||||.||+..... .....|++|||.++.+.
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            7999999999999643   4699999999999999999999999999999999999986544 33457999999999998


Q ss_pred             Ccccccccccccccccccccc--ccCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                      ......+..||+.|.+||..-  +.|+..+|.||||
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~G  211 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFG  211 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhh
Confidence            888888899999999999986  4589999999998

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.94  E-value=1.3e-26  Score=145.27  Aligned_cols=107  Identities=25%  Similarity=0.331  Sum_probs=91.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.....+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05619          75 MEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDA  151 (316)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC---CCCEEEccCCcceECCCCCC
Confidence            689999999999988888999999999999999999999999999999999999954   34599999998765322 12


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  183 (316)
T cd05619         152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFG  183 (316)
T ss_pred             ceeeecCCccccCHHHHcCCCCCchhhhhhHH
Confidence            2234568899999999874 489999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.94  E-value=2.7e-26  Score=144.59  Aligned_cols=107  Identities=25%  Similarity=0.438  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+ ...+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..+....
T Consensus        80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~---~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC---CCCEEEeecchheecccCC
Confidence            699999999999976 467999999999999999999999999999999999999953   3459999999886543222


Q ss_pred             c--ccccccccccccccccc------ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      .  .....|++.|+|||++.      ..++.++|+||||
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlG  195 (332)
T cd05623         157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLG  195 (332)
T ss_pred             cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeH
Confidence            1  12346899999999875      2378899999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=2e-26  Score=144.39  Aligned_cols=107  Identities=28%  Similarity=0.414  Sum_probs=91.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++..... ..
T Consensus        75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~  151 (318)
T cd05570          75 MEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS---EGHIKIADFGMCKEGILGGV  151 (318)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC---CCcEEecccCCCeecCcCCC
Confidence            699999999999988889999999999999999999999999999999999999954   44599999998765322 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+ .++.++|+||+|
T Consensus       152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  183 (318)
T cd05570         152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALG  183 (318)
T ss_pred             cccceecCccccCHHHhcCCCCCcchhhhhHH
Confidence            2233468889999999974 588999999997

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.9e-26  Score=143.83  Aligned_cols=107  Identities=26%  Similarity=0.488  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+ ...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..+....
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK---NGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC---CCCEEEEECCceeecCCCC
Confidence            689999999999976 467999999999999999999999999999999999999953   3459999999886654322


Q ss_pred             cc--cccccccccccccccc------ccCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      ..  ....|++.|+|||++.      +.++.++|+||+|
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  195 (331)
T cd05597         157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLG  195 (331)
T ss_pred             CccccceeccccccCHHHHhhccccccCCCCcceeehhh
Confidence            21  2246889999999985      2367899999997

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.93  E-value=5.2e-26  Score=143.03  Aligned_cols=107  Identities=27%  Similarity=0.464  Sum_probs=90.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+. ..+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||++..+....
T Consensus        80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~---~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR---TGHIKLADFGSAARLTANK  156 (330)
T ss_pred             ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC---CCCEEeccCCCCeECCCCC
Confidence            7999999999999776 78999999999999999999999999999999999999954   3459999999987664332


Q ss_pred             cc--cccccccccccccccc-------ccCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLK-------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~-------~~~~~~~d~wslg  110 (110)
                      ..  ....+++.|+|||++.       ..++.++|+||||
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  196 (330)
T cd05601         157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLG  196 (330)
T ss_pred             ceeeecccCCccccCHHHhccccccccCCCCCcceeeccc
Confidence            21  2246788999999885       2367899999998

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.93  E-value=9.2e-27  Score=151.39  Aligned_cols=106  Identities=25%  Similarity=0.469  Sum_probs=94.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      +|||.| +|..++...+.++|.++..++.++++|+.|||+++|+|||++|+||++   +....+|++|||+++.+.... 
T Consensus        80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~  155 (808)
T KOG0597|consen   80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS  155 (808)
T ss_pred             ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence            488887 999999999999999999999999999999999999999999999999   455669999999998876543 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|||.|||||.+.+ .|+..+|+||+|
T Consensus       156 vltsikGtPlYmAPElv~e~pyd~~sDlWslG  187 (808)
T KOG0597|consen  156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLG  187 (808)
T ss_pred             eeeeccCcccccCHHHHcCCCccchhhHHHHH
Confidence            3455689999999999985 499999999997

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=4.8e-27  Score=149.72  Aligned_cols=107  Identities=26%  Similarity=0.474  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC---
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP---   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~---   77 (110)
                      +|||+.|.+...--.+..+.+.+++.|++++..||+|||.++|+||||||+|+|+..   .+.+||+|||.+.....   
T Consensus       189 ley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~---~g~VKIsDFGVs~~~~~~~~  265 (576)
T KOG0585|consen  189 LEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS---DGTVKISDFGVSNEFPQGSD  265 (576)
T ss_pred             EEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC---CCcEEeeccceeeecccCCc
Confidence            588888777654433333899999999999999999999999999999999999954   45699999999876522   


Q ss_pred             ---ccccccccccccccccccccc-c----CCCccceeecC
Q 033837           78 ---REQFNELVGSLYYMALEVLKR-N----YGPEVDVWSML  110 (110)
Q Consensus        78 ---~~~~~~~~~~~~~~~pe~~~~-~----~~~~~d~wslg  110 (110)
                         ..++....|||.|+|||.+.+ .    .+.+.|+||+|
T Consensus       266 ~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG  306 (576)
T KOG0585|consen  266 EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG  306 (576)
T ss_pred             cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence               223345789999999999973 2    36789999998

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=1.2e-26  Score=150.81  Aligned_cols=107  Identities=37%  Similarity=0.684  Sum_probs=98.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|++++++.+.++..+..++.++.|+.+|++|||+++|+||||+..|++++.   ...+||+|||++..+.....
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~---~mnikIaDfgfS~~~~~~~~  210 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE---NMNIKIADFGFSTFFDYGLM  210 (596)
T ss_pred             EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc---ccceeeeccccceeeccccc
Confidence            799999999999999999999999999999999999999999999999999999954   34599999999999988888


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ..+.+|++.|.|||+..+. | ++.+|+||+|
T Consensus       211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslg  242 (596)
T KOG0586|consen  211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLG  242 (596)
T ss_pred             ccccCCCCCccChHhhcCcccCCcceehhhhh
Confidence            8889999999999999854 4 7899999987

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=7e-26  Score=144.57  Aligned_cols=106  Identities=30%  Similarity=0.458  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.. ..+++..+..++.|++.|+.|||+.+++||||+|+||+++.   ...++++|||.+........
T Consensus       122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~---~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC---CCCEEEEeccceeeccCCCc
Confidence            799999999998854 46889999999999999999999999999999999999954   44599999998876543221


Q ss_pred             --cccccccccccccccccc-----cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-----NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-----~~~~~~d~wslg  110 (110)
                        .....|++.|+|||++.+     .++.++|+||||
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehh
Confidence              233568999999998852     278899999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=143.16  Aligned_cols=106  Identities=28%  Similarity=0.477  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC---
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP---   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~---   77 (110)
                      +|+|+ -||.+.++.++.+++..+..++.|++.|+.|+|+.+++|||+||.|+++..+.   .+|++|||+++....   
T Consensus       105 ~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c---~lKI~DFGLAR~~~~~~~  180 (359)
T KOG0660|consen  105 FELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC---DLKICDFGLARYLDKFFE  180 (359)
T ss_pred             hhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC---CEEeccccceeeccccCc
Confidence            35564 48888888888899999999999999999999999999999999999996443   489999999988753   


Q ss_pred             cccccccccccccccccccc--ccCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                      ......++.|.+|+|||++.  ..|+...||||.|
T Consensus       181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvG  215 (359)
T KOG0660|consen  181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVG  215 (359)
T ss_pred             ccchhcceeeeeecCHHHHhccccccchhhhhhhh
Confidence            22335678899999999986  4599999999987

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=7.9e-27  Score=150.19  Aligned_cols=107  Identities=25%  Similarity=0.474  Sum_probs=98.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||-|-||++...+...+.|.+..++++++.++.|++|||+++|++|||||+|++++.+   +.+|+.|||++..+.....
T Consensus       499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~---Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR---GYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC---CceEEeehhhHHHhccCCc
Confidence            6778899999999999999999999999999999999999999999999999999554   4599999999999988887


Q ss_pred             ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .-+.+|||.|.|||++. ...+.++|.||||
T Consensus       576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLG  606 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALG  606 (732)
T ss_pred             eeeecCCcccccchhhhccCcchhhHHHHHH
Confidence            78899999999999887 4478899999987

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.93  E-value=6.7e-26  Score=142.87  Aligned_cols=90  Identities=22%  Similarity=0.279  Sum_probs=72.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc---ccccccccccccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALE   94 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe   94 (110)
                      +++...+..++.|++.|+.|+|+++++||||||.||+++.   ...++++|||++.........   ....+++.|+|||
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC---CCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence            3677888999999999999999999999999999999954   345999999988765332211   1123456799999


Q ss_pred             cccc-cCCCccceeecC
Q 033837           95 VLKR-NYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~~-~~~~~~d~wslg  110 (110)
                      .+.+ .++.++|+||||
T Consensus       247 ~~~~~~~~~~sDiwslG  263 (338)
T cd05102         247 SIFDKVYTTQSDVWSFG  263 (338)
T ss_pred             HhhcCCCCcccCHHHHH
Confidence            9874 589999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=5.6e-26  Score=149.01  Aligned_cols=107  Identities=26%  Similarity=0.446  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++..    ..++++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++....
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~---~~~~kL~DFgla~~~~  220 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP---TGIIKLGDFGFSKQYS  220 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC---CCcEEEEeCcCceecC
Confidence            799999999988753    356899999999999999999999999999999999999954   4459999999987764


Q ss_pred             Cccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....   ....+|++.|+|||++.+ .++.++|+||||
T Consensus       221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG  258 (478)
T PTZ00267        221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLG  258 (478)
T ss_pred             CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHH
Confidence            3321   233568999999999874 489999999987

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.93  E-value=9.9e-26  Score=146.15  Aligned_cols=109  Identities=27%  Similarity=0.518  Sum_probs=96.4

Q ss_pred             CCCcCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIV--AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||-+. ||+.+++.  +++++++...+.+..||+.|+.|||-++|+|+||||+|+++...+....+|++|||+++.+.-.
T Consensus       642 MEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk  720 (888)
T KOG4236|consen  642 MEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK  720 (888)
T ss_pred             ehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence            55554 68888775  4589999999999999999999999999999999999999987777778999999999998777


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......|||.|+|||++.. .|+.+.||||.|
T Consensus       721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVG  753 (888)
T KOG4236|consen  721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVG  753 (888)
T ss_pred             hhhhhhcCCccccCHHHHhhccccccccceeee
Confidence            66677899999999999984 599999999987

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=9.9e-26  Score=139.05  Aligned_cols=107  Identities=23%  Similarity=0.374  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+.+..    ...+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+....
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~  148 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN---DGNVRISDLGLAVELK  148 (280)
T ss_pred             EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCccceecC
Confidence            789999999887742    356899999999999999999999999999999999999953   4459999999887654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       149 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG  184 (280)
T cd05608         149 DGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALG  184 (280)
T ss_pred             CCCccccccCCCcCccCHHHhcCCCCCccccHHHHH
Confidence            3322 233467889999999974 588999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=1.5e-25  Score=140.80  Aligned_cols=106  Identities=25%  Similarity=0.334  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|...+. .+.+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++..... ..
T Consensus        81 ~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~---~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          81 MEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC---CCcEEeCcccCCccCCCCCC
Confidence            79999999988774 457999999999999999999999999999999999999954   34599999998765322 12


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  188 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLG  188 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHH
Confidence            2234568899999999875 488899999997

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.5e-26  Score=142.75  Aligned_cols=107  Identities=26%  Similarity=0.400  Sum_probs=96.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-CCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-~~~~   79 (110)
                      |||+.||+|+-++.....|++...+.+-++|++|+.|||+++|++||+|.+|++++.++.   +|+.|||+|..- ....
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH---IKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH---IKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc---eEeeecccchhcccccc
Confidence            799999999999998889999999999999999999999999999999999999965554   999999999764 3444


Q ss_pred             cccccccccccccccccccc-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ...+.||||.|+|||++..+ |+..+|+|.+|
T Consensus       324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~G  355 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVG  355 (516)
T ss_pred             eeccccCChhhcCchhhccccccceeehhhhh
Confidence            55678999999999999865 99999999876

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=7.1e-26  Score=148.19  Aligned_cols=103  Identities=31%  Similarity=0.491  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||-| +-.+.+. .+.++.+..+..++.+.+.|+.|||+.+.||||||.-||++.   ..+.||++|||.+....+. 
T Consensus       105 MEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~PA-  179 (948)
T KOG0577|consen  105 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAPA-  179 (948)
T ss_pred             HHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCch-
Confidence            789975 7777774 456799999999999999999999999999999999999995   4556999999977654432 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        ++++|||+|||||++.    |.|+-++|+||||
T Consensus       180 --nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG  212 (948)
T KOG0577|consen  180 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  212 (948)
T ss_pred             --hcccCCccccchhHheeccccccCCccceeecc
Confidence              4678999999999874    6799999999998

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1.3e-25  Score=147.75  Aligned_cols=107  Identities=23%  Similarity=0.442  Sum_probs=90.0

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++...    ..+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...+|++|||+++...
T Consensus       118 ~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~---~~~vkL~DFGls~~~~  194 (496)
T PTZ00283        118 LDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDFGFSKMYA  194 (496)
T ss_pred             EeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC---CCCEEEEecccCeecc
Confidence            6899999999988642    46899999999999999999999999999999999999954   3459999999987654


Q ss_pred             Ccc---ccccccccccccccccccc-cCCCccceeecC
Q 033837           77 PRE---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...   ......|++.|+|||.+.+ .++.++|+||||
T Consensus       195 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG  232 (496)
T PTZ00283        195 ATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG  232 (496)
T ss_pred             ccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence            321   1233578999999999984 589999999987

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.92  E-value=3.5e-25  Score=136.43  Aligned_cols=107  Identities=23%  Similarity=0.301  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+.+...  ..+.+..+..++.|++.|+.|+|+.+++|+||+|+||+++.   ...++++|||.+......
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~---~~~~~l~Dfg~~~~~~~~  148 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD---QGNCRLSDLGLAVELKDG  148 (277)
T ss_pred             EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC---CCCEEEeeceeeeecCCC
Confidence            6899999999888654  35888999999999999999999999999999999999954   445899999988766543


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|+|||++.+ .++.++|+||+|
T Consensus       149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  181 (277)
T cd05607         149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMG  181 (277)
T ss_pred             ceeeccCCCCCccCHHHHccCCCCCchhHHHHH
Confidence            33334567889999999874 488999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=5.1e-25  Score=136.17  Aligned_cols=107  Identities=27%  Similarity=0.369  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+.+...  ..+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD---YGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC---CCCEEEeeCCCceecCCC
Confidence            6899999999888653  46899999999999999999999999999999999999953   445999999988765443


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|++||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G  188 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLG  188 (285)
T ss_pred             CccccccCCCCccCcHHhcCCCCCccccchhHH
Confidence            33334567889999999874 488899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.92  E-value=1.4e-25  Score=141.16  Aligned_cols=106  Identities=28%  Similarity=0.467  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||. ++|.+.+.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus        83 ~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          83 FELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCcEEEccCccccccccccC
Confidence            68885 689999988888999999999999999999999999999999999999943   44699999998875432211


Q ss_pred             ----cccccccccccccccccc---cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                          .....+++.|+|||++.+   .++.++|+||||
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlG  195 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG  195 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHH
Confidence                123568899999999853   478899999997

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.6e-25  Score=144.62  Aligned_cols=107  Identities=22%  Similarity=0.283  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||+|+||+|.+++.+.+ .++..+...++.+.+.|++|||+++++||||..+|+|+..   ...+|++|||+++....-.
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~---~~~vKISDFGLs~~~~~~~  316 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK---KGVVKISDFGLSRAGSQYV  316 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC---CCeEEeCccccccCCccee
Confidence            79999999999998876 5999999999999999999999999999999999999943   3458999999987643111


Q ss_pred             cccccc-cccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELV-GSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~-~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...... -...|+|||.+. +.|+.++|+||||
T Consensus       317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfG  349 (474)
T KOG0194|consen  317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFG  349 (474)
T ss_pred             eccccccCcceecChhhhccCccccccchhhee
Confidence            111111 134699999998 5699999999998

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.6e-26  Score=141.42  Aligned_cols=107  Identities=22%  Similarity=0.408  Sum_probs=96.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-CCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-~~~~   79 (110)
                      .||++||+|.-++.++..+++..++.+.++|..|+.|||++|||+||+|.+|++++.++.   +|+.|+|.++.- .+..
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh---ikltdygmcke~l~~gd  406 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH---IKLTDYGMCKEGLGPGD  406 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc---eeecccchhhcCCCCCc
Confidence            389999999999988889999999999999999999999999999999999999965554   999999998764 3455


Q ss_pred             cccccccccccccccccccc-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ...+.+|||.|.|||++.+. |+.++|+|+||
T Consensus       407 ~tstfcgtpnyiapeilrgeeygfsvdwwalg  438 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALG  438 (593)
T ss_pred             ccccccCCCcccchhhhcccccCceehHHHHH
Confidence            56678999999999999965 99999999987

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.92  E-value=3.2e-25  Score=137.10  Aligned_cols=106  Identities=27%  Similarity=0.448  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. ++|.+++...  ..+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        88 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~  163 (290)
T cd07862          88 FEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQ  163 (290)
T ss_pred             EccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC---CCCEEEccccceEeccCC
Confidence            57886 5898888653  45899999999999999999999999999999999999954   345999999998765443


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+. ..++.++|+||+|
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  196 (290)
T cd07862         164 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG  196 (290)
T ss_pred             cccccccccccccChHHHhCCCCCCccchHHHH
Confidence            3334456788999999986 4588899999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=1.2e-25  Score=146.58  Aligned_cols=107  Identities=21%  Similarity=0.322  Sum_probs=95.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      +|.+..|+|..|+++-++++...++.|++||+.||.|||++.  |||||||-+||++.  +.-+.|||+|+|++..+...
T Consensus       122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcc
Confidence            478889999999999999999999999999999999999986  99999999999996  44567999999999876554


Q ss_pred             cccccccccccccccccccccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      ... .-+|||.|||||..-..|+..+|+||||
T Consensus       200 ~ak-svIGTPEFMAPEmYEE~YnE~VDVYaFG  230 (632)
T KOG0584|consen  200 HAK-SVIGTPEFMAPEMYEENYNELVDVYAFG  230 (632)
T ss_pred             ccc-eeccCccccChHHHhhhcchhhhhhhhh
Confidence            432 3689999999999998899999999998

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=154.70  Aligned_cols=107  Identities=30%  Similarity=0.497  Sum_probs=92.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+.+..+.-.++.....+..|++.|+.|||+.||+|||+||.||+++.   ++.+|++|||.+..+.+.. 
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~---~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF---NGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec---CCcEEeecccceeEecCchh
Confidence            899999999999988877888888999999999999999999999999999999954   4469999999988775543 


Q ss_pred             ----cccccccccccccccccccc----CCCccceeecC
Q 033837           80 ----QFNELVGSLYYMALEVLKRN----YGPEVDVWSML  110 (110)
Q Consensus        80 ----~~~~~~~~~~~~~pe~~~~~----~~~~~d~wslg  110 (110)
                          ......||+.|||||++.+.    ...++|+||+|
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence                13457899999999998632    45689999998

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.8e-25  Score=141.08  Aligned_cols=106  Identities=21%  Similarity=0.295  Sum_probs=90.1

Q ss_pred             CCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcC---CeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            2 KLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHG---VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||+++|+|.+++....  .+++.+...|+.+++.||.|||...   |+|||+|+.||+++   .....|++|||++....
T Consensus       152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD---~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD---EDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC---CCCCEEccCccCcccCC
Confidence            8999999999997653  8999999999999999999999743   99999999999994   45668999999996654


Q ss_pred             C-ccccccc-ccccccccccccc-ccCCCccceeecC
Q 033837           77 P-REQFNEL-VGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        77 ~-~~~~~~~-~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      . ....... .||..|++||+.. +..+.++|+||||
T Consensus       229 ~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG  265 (361)
T KOG1187|consen  229 EGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFG  265 (361)
T ss_pred             ccccceeeecCCCCccCChhhhccCCcCcccccccch
Confidence            4 3322333 7899999999997 6789999999998

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=6.7e-26  Score=134.08  Aligned_cols=106  Identities=28%  Similarity=0.503  Sum_probs=92.9

Q ss_pred             CCCcCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIV--AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      +||.++|+++..+.  ...++.+.....+..|++.|+.|+|.+++||||++|+|+++   +....+|++|||.+..-. .
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p-~  176 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP-S  176 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecC-C
Confidence            58999999999998  45779999999999999999999999999999999999999   444569999999886644 3


Q ss_pred             ccccccccccccccccccccc-CCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ....+.+||.-|.+||...+. ++..+|+|++|
T Consensus       177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lg  209 (281)
T KOG0580|consen  177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLG  209 (281)
T ss_pred             CCceeeecccccCCHhhcCCCCccchhhHHHHH
Confidence            344567999999999999865 88999999987

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=144.03  Aligned_cols=107  Identities=36%  Similarity=0.631  Sum_probs=95.0

Q ss_pred             CCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            2 KLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         2 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |+=.+|||++++.+. ..+++..+++|++||+.|+.|||+..++||||||+|+++.+.  -+.||+.|||++..+.++.+
T Consensus        97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK--lGlVKLTDFGFSNkf~PG~k  174 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK--LGLVKLTDFGFSNKFQPGKK  174 (864)
T ss_pred             EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee--cCceEeeeccccccCCCcch
Confidence            444688999999765 679999999999999999999999999999999999988643  34589999999999999888


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ..+.||+..|-|||++.+. | .+++|+||||
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLG  206 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLG  206 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHH
Confidence            8999999999999999864 6 5789999997

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.92  E-value=1.7e-25  Score=145.55  Aligned_cols=107  Identities=20%  Similarity=0.322  Sum_probs=87.1

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++ ++.+++.    ....+++..+..++.|++.|+.|||+++++||||+|+||+++.+  ...+|++|||++..+.
T Consensus       146 mE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~--~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        146 MEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN--THTLKLCDFGSAKNLL  222 (440)
T ss_pred             EecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC--CCceeeeccccchhcc
Confidence            688875 6766654    34679999999999999999999999999999999999999532  2358999999987665


Q ss_pred             Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .........+++.|+|||++.+  .|+.++|+||+|
T Consensus       223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  258 (440)
T PTZ00036        223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLG  258 (440)
T ss_pred             CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHH
Confidence            4433344577899999998864  489999999997

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.92  E-value=6.3e-25  Score=135.59  Aligned_cols=106  Identities=25%  Similarity=0.441  Sum_probs=87.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++ ++.+++...  ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        86 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~---~~~~kl~dfg~~~~~~~~  161 (288)
T cd07863          86 FEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGQVKLADFGLARIYSCQ  161 (288)
T ss_pred             Eccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECccCccccccCc
Confidence            577774 888888654  35899999999999999999999999999999999999954   345999999988765443


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+.+ .++.++|+||+|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  194 (288)
T cd07863         162 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG  194 (288)
T ss_pred             ccCCCccccccccCchHhhCCCCCCcchhhhHH
Confidence            33334567888999999874 588999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=6.8e-25  Score=135.67  Aligned_cols=107  Identities=26%  Similarity=0.377  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++.++..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~---~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC---CCCEEEeeccceeecCCC
Confidence            6899999999988543  45899999999999999999999999999999999999953   445999999988765443


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......|++.|+|||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  188 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG  188 (285)
T ss_pred             ccccCCCCCccccChHHHcCCCCCCccccHHHH
Confidence            33334567889999999974 588999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.92  E-value=3.3e-25  Score=129.28  Aligned_cols=94  Identities=28%  Similarity=0.437  Sum_probs=81.2

Q ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccc
Q 033837           14 VAKGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMA   92 (110)
Q Consensus        14 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~   92 (110)
                      ++++.++|..+-+++..+..|+.|||++ .++|||+||.||+++.   .+.+|++|||.+-.+.++....-..|...|+|
T Consensus       140 ~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~---~GqVKiCDFGIsG~L~dSiAkt~daGCkpYma  216 (282)
T KOG0984|consen  140 KKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY---DGQVKICDFGISGYLVDSIAKTMDAGCKPYMA  216 (282)
T ss_pred             hcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc---CCcEEEcccccceeehhhhHHHHhcCCCccCC
Confidence            4567899999999999999999999985 8999999999999954   44599999999988877766555678889999


Q ss_pred             ccccc-----ccCCCccceeecC
Q 033837           93 LEVLK-----RNYGPEVDVWSML  110 (110)
Q Consensus        93 pe~~~-----~~~~~~~d~wslg  110 (110)
                      ||.+.     ..|+.++|+||||
T Consensus       217 PEri~~e~n~~gY~vksDvWSLG  239 (282)
T KOG0984|consen  217 PERINPELNQKGYSVKSDVWSLG  239 (282)
T ss_pred             hhhcCcccCcccceeehhhhhhh
Confidence            99985     2389999999998

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.92  E-value=6.4e-25  Score=135.57  Aligned_cols=107  Identities=23%  Similarity=0.443  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++++.+.........+++..+..++.|++.|+.|||+.+++|+||+|+||+++.   ...++++|||.+........
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEEeeccCccccccccc
Confidence            689998766655544567999999999999999999999999999999999999954   34599999998876543221


Q ss_pred             --cccccccccccccccccc-cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        .....+++.|+|||++.+ .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  188 (287)
T cd07848         156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVG  188 (287)
T ss_pred             ccccccccccccCCcHHHcCCCCCCchhHHhHH
Confidence              223467889999999874 488999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=6.4e-25  Score=141.04  Aligned_cols=106  Identities=24%  Similarity=0.386  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      ||++. ++|..++.....+++..+..++.|++.|+.|+|+++|+||||||+||+++..   ..++++|||++......  
T Consensus       162 ~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~---~~vkL~DFG~a~~~~~~~~  237 (391)
T PHA03212        162 LPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHP---GDVCLGDFGAACFPVDINA  237 (391)
T ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCC---CCEEEEeCCcccccccccc
Confidence            46664 6899988887889999999999999999999999999999999999999543   45999999988653221  


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......||+.|+|||++.+ .++.++|+||+|
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  270 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAG  270 (391)
T ss_pred             cccccccCccCCCChhhhcCCCCCcHHHHHHHH
Confidence            12234578999999999874 589999999987

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.91  E-value=7.3e-25  Score=138.03  Aligned_cols=106  Identities=26%  Similarity=0.418  Sum_probs=90.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|+|++ +++|+||+|+||+++.+   ..++++|||++...... 
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~-  157 (331)
T cd06649          82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS-  157 (331)
T ss_pred             eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC---CcEEEccCccccccccc-
Confidence            79999999999998888899999999999999999999986 59999999999999543   45999999988655332 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+ .++.++|+||||
T Consensus       158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  189 (331)
T cd06649         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG  189 (331)
T ss_pred             ccccCCCCcCcCCHhHhcCCCCCchHhHHHHH
Confidence            2234568889999999974 488999999987

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.91  E-value=8.2e-25  Score=134.98  Aligned_cols=106  Identities=26%  Similarity=0.379  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~---~~~~~l~dfg~~~~~~~~~-  151 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLACDFSKKK-  151 (279)
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC---CCCEEEccCCcceeccccC-
Confidence            689999999999988888999999999999999999999999999999999999954   3459999999886543322 


Q ss_pred             ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+. + .++.++|+||+|
T Consensus       152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  183 (279)
T cd05633         152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLG  183 (279)
T ss_pred             ccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence            22346788999999886 3 378899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=3.4e-25  Score=148.28  Aligned_cols=107  Identities=23%  Similarity=0.369  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||||.||.|.+++.+.  ..|++.++.+|+.+++.|+.+||.+.  |||||||-+|+|+..+   ...||+|||.+....
T Consensus       121 mEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~---g~~KLCDFGSatt~~  197 (738)
T KOG1989|consen  121 MEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD---GNYKLCDFGSATTKI  197 (738)
T ss_pred             hhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC---CCEEeCccccccccc
Confidence            8999999999999843  66999999999999999999999987  9999999999999543   459999999765432


Q ss_pred             Ccc-cc------c---ccccccccccccccc---c-cCCCccceeecC
Q 033837           77 PRE-QF------N---ELVGSLYYMALEVLK---R-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~-~~------~---~~~~~~~~~~pe~~~---~-~~~~~~d~wslg  110 (110)
                      ... ..      .   ...-|+.|++||.+.   + ..+.++|||+||
T Consensus       198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG  245 (738)
T KOG1989|consen  198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG  245 (738)
T ss_pred             CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence            111 00      0   123478899999985   3 378999999997

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.91  E-value=1.2e-24  Score=134.18  Aligned_cols=106  Identities=26%  Similarity=0.367  Sum_probs=90.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~---~~~~kl~dfg~~~~~~~~~-  151 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLACDFSKKK-  151 (278)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC---CCCEEEccCcCccccCccC-
Confidence            689999999999988888999999999999999999999999999999999999954   3459999999876553322 


Q ss_pred             ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      .....++..|++||.+. + .++.++|+||+|
T Consensus       152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G  183 (278)
T cd05606         152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLG  183 (278)
T ss_pred             CcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence            22346788999999986 3 478899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=1.4e-24  Score=134.24  Aligned_cols=107  Identities=26%  Similarity=0.372  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~---~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD---YGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC---CCCEEEecCCcceecCCC
Confidence            6899999999888643  46999999999999999999999999999999999999953   345999999988665433


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|++||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG  188 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLG  188 (285)
T ss_pred             CcccCCCCCcCccChHHhcCCCCCcccchHHHH
Confidence            33334567889999999874 488999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.91  E-value=6e-25  Score=136.82  Aligned_cols=106  Identities=21%  Similarity=0.381  Sum_probs=86.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. +++.+++.+. +.+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...+|++|||.+.......
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD---TGELKLADFGLARAKSVPS  157 (303)
T ss_pred             EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECCCCcceeccCCC
Confidence            68886 5888877654 67899999999999999999999999999999999999954   4459999999886543222


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||++.+  .++.++|+||+|
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  191 (303)
T cd07869         158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVG  191 (303)
T ss_pred             ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHH
Confidence             2233567889999998863  378889999997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.91  E-value=1.6e-24  Score=138.54  Aligned_cols=90  Identities=18%  Similarity=0.242  Sum_probs=72.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc---ccccccccccccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALE   94 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe   94 (110)
                      ++++.++..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++.........   ....+++.|+|||
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~---~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  284 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD---GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPE  284 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC---CCeEEEeeceeeeeccCCcceeeccCCCCccceeCHH
Confidence            3677889999999999999999999999999999999954   345899999998765432211   1122345699999


Q ss_pred             ccc-ccCCCccceeecC
Q 033837           95 VLK-RNYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~-~~~~~~~d~wslg  110 (110)
                      ++. ..++.++|+||||
T Consensus       285 ~~~~~~~~~~~DvwSlG  301 (374)
T cd05106         285 SIFDCVYTVQSDVWSYG  301 (374)
T ss_pred             HhcCCCCCccccHHHHH
Confidence            987 4589999999987

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00284 protein kinase; Provisional

Probab=99.91  E-value=9.8e-25  Score=142.81  Aligned_cols=106  Identities=24%  Similarity=0.319  Sum_probs=86.4

Q ss_pred             CCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCC-------------CceEEEe
Q 033837            2 KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKK-------------SFSLKAI   67 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~-------------~~~~~l~   67 (110)
                      |++ +++|.+++.+.+.+++..+..++.|++.|+.|||+ .+|+||||||+||+++..+.             ...+||+
T Consensus       212 ~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~  290 (467)
T PTZ00284        212 PKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRIC  290 (467)
T ss_pred             ecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEEC
Confidence            444 67899999888889999999999999999999998 59999999999999965432             1248999


Q ss_pred             ecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           68 DFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        68 d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |||.+.....  ......|++.|+|||++.+ .|+.++|+||||
T Consensus       291 DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG  332 (467)
T PTZ00284        291 DLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG  332 (467)
T ss_pred             CCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence            9997653221  1234578999999999985 589999999997

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=2.2e-24  Score=131.98  Aligned_cols=107  Identities=28%  Similarity=0.473  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++.++..++.|++.++.|+|+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD---NGHVKLADFGVSAQITATIA  161 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECcceeeeEccCccc
Confidence            689999999999988889999999999999999999999999999999999999953   4459999999876553221 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.    ..++.++|+||+|
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG  196 (267)
T cd06645         162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVG  196 (267)
T ss_pred             ccccccCcccccChhhhccccCCCCCchhhhHHHH
Confidence            122346788999999873    2378899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=2.6e-24  Score=144.69  Aligned_cols=107  Identities=26%  Similarity=0.518  Sum_probs=93.2

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||.+|+..++++.  +.++.|..+..++..++.|+.+||.+.++|||++-.||+++.+   +.||+.|||++..+...
T Consensus       100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDST  176 (953)
T ss_pred             eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc---CcEEEeeeeeeeeeecc
Confidence            899999999999974  4679999999999999999999999999999999999999654   45999999999887653


Q ss_pred             c-ccccccccccccccccccc------cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR------NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~------~~~~~~d~wslg  110 (110)
                      . ...+..|||+|||||++..      .|+.++|+||||
T Consensus       177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG  215 (953)
T KOG0587|consen  177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG  215 (953)
T ss_pred             cccccCcCCCcccccceeeecccCCCCCcccccchhhcc
Confidence            2 3456789999999999962      277899999998

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=133.79  Aligned_cols=110  Identities=31%  Similarity=0.493  Sum_probs=91.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec--CC-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF--RP-   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~--~~-   77 (110)
                      ||-|.||.|.+++.+...|++..+..+..+|++|+.|||.+||.|||+||+||+-...+....+|++||.+..-+  .. 
T Consensus       155 fEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~  234 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND  234 (463)
T ss_pred             EecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence            578899999999999999999999999999999999999999999999999999876666778999998654322  11 


Q ss_pred             -----cccccccccccccccccccc---c---cCCCccceeecC
Q 033837           78 -----REQFNELVGSLYYMALEVLK---R---NYGPEVDVWSML  110 (110)
Q Consensus        78 -----~~~~~~~~~~~~~~~pe~~~---~---~~~~~~d~wslg  110 (110)
                           .+...+.+|+..|||||++.   +   -|+.++|.||||
T Consensus       235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG  278 (463)
T KOG0607|consen  235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG  278 (463)
T ss_pred             CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence                 11123457888899999873   3   289999999997

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.91  E-value=2.2e-24  Score=131.24  Aligned_cols=107  Identities=18%  Similarity=0.198  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC----CCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK----KSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~----~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+++.... .++...+..++.|++.|+.|+|+++++|+||+|+||+++.++    ....++++|||.+...
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            68999999999998765 789999999999999999999999999999999999997544    2235899999987665


Q ss_pred             CCccccccccccccccccccccc---cCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ...   ....+...|++||.+.+   .++.++|+||||
T Consensus       159 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  193 (259)
T cd05037         159 LSR---EERVERIPWIAPECIRNGQASLTIAADKWSFG  193 (259)
T ss_pred             ccc---cccccCCCccChhhhcCCCCCcchhhHHHHHH
Confidence            431   12345567999999863   478899999987

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.3e-24  Score=143.25  Aligned_cols=107  Identities=31%  Similarity=0.522  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC---
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP---   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~---   77 (110)
                      |||++|||+.++|-+.+-|.|..+++|.+++..|+++.|..|.|||||||+|||++.++.   +||.|||+|.-+..   
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH---IKLTDFGLCTGfRWTHd  784 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHD  784 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc---eeeeeccccccceeccc
Confidence            899999999999999999999999999999999999999999999999999999976655   99999998753200   


Q ss_pred             ------------------------ccc----------------ccccccccccccccccccc-CCCccceeecC
Q 033837           78 ------------------------REQ----------------FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        78 ------------------------~~~----------------~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                                              ..+                -+..+||+.|+|||++... |...+|+||.|
T Consensus       785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~g  858 (1034)
T KOG0608|consen  785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVG  858 (1034)
T ss_pred             cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhh
Confidence                                    000                0124789999999999854 88899999976

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=1.2e-24  Score=134.78  Aligned_cols=106  Identities=23%  Similarity=0.411  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ +|.+++... ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||.+.......
T Consensus        82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~---~~~~kl~DfG~~~~~~~~~  157 (288)
T cd07871          82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE---KGELKLADFGLARAKSVPT  157 (288)
T ss_pred             EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEECcCcceeeccCCC
Confidence            688875 899988654 45789999999999999999999999999999999999954   3459999999886643222


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  191 (288)
T cd07871         158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVG  191 (288)
T ss_pred             ccccCceecccccChHHhcCCcccCcHHHHHHHH
Confidence             1233467889999998863  478899999987

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.91  E-value=1.6e-24  Score=136.61  Aligned_cols=106  Identities=27%  Similarity=0.448  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.+++.|+.|+|+. +++|+||+|+||+++.+   ..++++|||++.......
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~  158 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM  158 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCC---CCEEEeeCCcchhhhhhc
Confidence            68999999999998888899999999999999999999985 79999999999999543   459999999886543221


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|+|||.+.+ .++.++|+||||
T Consensus       159 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  189 (333)
T cd06650         159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMG  189 (333)
T ss_pred             -cccCCCCccccCHHHhcCCCCCcHHHHHHHH
Confidence             223467889999999875 488899999987

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=1.9e-24  Score=137.41  Aligned_cols=106  Identities=23%  Similarity=0.316  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. ++|.+++.. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||.+.......
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~~  211 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND---VDQVCIGDLGAAQFPVVAP  211 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEecCccccccccCc
Confidence            46664 588888865 467999999999999999999999999999999999999954   3458999999886543332


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  243 (357)
T PHA03209        212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAG  243 (357)
T ss_pred             ccccccccccccCCeecCCCCCCchhhHHHHH
Confidence            2334568899999999874 589999999987

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.91  E-value=2.8e-24  Score=133.83  Aligned_cols=107  Identities=20%  Similarity=0.312  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhC-------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCC
Q 033837            1 MKLCEEGELVDRIVAK-------------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS   61 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~   61 (110)
                      |||+++|+|.+++...                   ..++...+..++.|++.|+.|||+.+++|+||+|+||+++.   .
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~---~  174 (304)
T cd05096          98 TEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE---N  174 (304)
T ss_pred             EecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcC---C
Confidence            6899999999988543                   13567788999999999999999999999999999999954   3


Q ss_pred             ceEEEeecccceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           62 FSLKAIDFGLSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        62 ~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..++++|||.+..+......   ....++..|+|||.+. +.++.++|+||||
T Consensus       175 ~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  227 (304)
T cd05096         175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG  227 (304)
T ss_pred             ccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHH
Confidence            45999999988765433211   1123456799999886 4589999999987

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.91  E-value=3.1e-24  Score=134.21  Aligned_cols=109  Identities=22%  Similarity=0.422  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC-CCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK---------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~-~~~~~~~l~d~g   70 (110)
                      |||+. +++.+++...         ..+++..+..++.|++.|+.|||+++++||||+|+||++... +....+|++|||
T Consensus        79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          79 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            46765 4787776421         258899999999999999999999999999999999999643 234569999999


Q ss_pred             cceecCCcc----ccccccccccccccccccc--cCCCccceeecC
Q 033837           71 LSVFFRPRE----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ++.......    ......+++.|+|||++.+  .++.++|+||+|
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  203 (317)
T cd07868         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHH
Confidence            987653321    1233567889999999864  378899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.91  E-value=8.5e-25  Score=146.04  Aligned_cols=107  Identities=24%  Similarity=0.385  Sum_probs=93.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      .|||++|+|.++|.+. ++|...+++.+++.|++|+.||.+.+.+||||..+|||+   +.+.++|++|||+++.+.+..
T Consensus       709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccCC
Confidence            4899999999999875 789999999999999999999999999999999999999   667789999999999886544


Q ss_pred             -cccc-cccc--cccccccccc-ccCCCccceeecC
Q 033837           80 -QFNE-LVGS--LYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~-~~~~--~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                       ...+ .-|.  ..|+|||++. +++..++|+||+|
T Consensus       786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyG  821 (996)
T KOG0196|consen  786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYG  821 (996)
T ss_pred             CccccccCCccceeecChhHhhhcccCchhhccccc
Confidence             2222 2232  3599999998 7799999999998

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.91  E-value=3.3e-24  Score=132.05  Aligned_cols=107  Identities=21%  Similarity=0.286  Sum_probs=87.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+. +.+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~---~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS---PNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC---CCcEEECCCCceeeccccc
Confidence            5789999999999764 57999999999999999999999999999999999999954   3348999999887664322


Q ss_pred             cc---ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   ....+++.|++||.+.+ .++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  198 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG  198 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHH
Confidence            11   11233567999999874 588899999987

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.91  E-value=2.3e-24  Score=136.77  Aligned_cols=104  Identities=27%  Similarity=0.445  Sum_probs=84.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+ ++.+.+..  .+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++........
T Consensus       101 ~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~---~~~~kl~Dfg~~~~~~~~~~  174 (355)
T cd07874         101 MELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  174 (355)
T ss_pred             hhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC---CCCEEEeeCcccccCCCccc
Confidence            577765 66665543  4788999999999999999999999999999999999954   34599999999876544433


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||||
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  205 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  205 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHH
Confidence            344578899999999875 488999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.90  E-value=4.8e-24  Score=133.47  Aligned_cols=107  Identities=23%  Similarity=0.319  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++|+|.+++.+. ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~---~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC---CCcEEEccccccccccCCC
Confidence            5789999999999764 56889999999999999999999999999999999999954   3459999999987664322


Q ss_pred             cc---cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..   .....+..|++||.+. ..++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  198 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG  198 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHH
Confidence            21   1122345799999987 4588999999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.90  E-value=4.3e-24  Score=133.09  Aligned_cols=107  Identities=21%  Similarity=0.278  Sum_probs=84.1

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.+..                .+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~---~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC---CCcE
Confidence            68999999999986432                4788999999999999999999999999999999999954   3459


Q ss_pred             EEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||++..............+..|++||...+ .++.++|+||||
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  210 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG  210 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhh
Confidence            9999998753221111111123456999998874 478899999998

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.90  E-value=3.9e-24  Score=135.94  Aligned_cols=104  Identities=27%  Similarity=0.432  Sum_probs=83.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+ ++.+.+.  ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++........
T Consensus       105 ~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~---~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876         105 MELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             EeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEecCCCccccccCcc
Confidence            577765 5666553  34788999999999999999999999999999999999954   44599999998875443333


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG  209 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  209 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHH
Confidence            334567889999999875 588999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.90  E-value=5.1e-24  Score=130.72  Aligned_cols=105  Identities=26%  Similarity=0.495  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++.++..++.|++.|+.++|+.+++|+|++|+||++..++  ..++++|||.+....... 
T Consensus        88 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~~-  164 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK--DRIYLCDYGLCKIIGTPS-  164 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC--CeEEEecCccceecCCCc-
Confidence            68999999999998877999999999999999999999999999999999999996443  259999999876653322 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        ...++..|+|||.+.+ .++.++|+||+|
T Consensus       165 --~~~~~~~y~aPE~~~~~~~~~~~DvwslG  193 (267)
T PHA03390        165 --CYDGTLDYFSPEKIKGHNYDVSFDWWAVG  193 (267)
T ss_pred             --cCCCCCcccChhhhcCCCCCchhhHHHHH
Confidence              2356788999999974 588899999987

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=3.4e-24  Score=137.68  Aligned_cols=106  Identities=20%  Similarity=0.312  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||++. +++.+++.....+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++..+.....
T Consensus       165 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~---~~~~~l~DfG~a~~~~~~~~  240 (392)
T PHA03207        165 MPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE---PENAVLGDFGAACKLDAHPD  240 (392)
T ss_pred             ehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEEEccCccccccCcccc
Confidence            56665 589998877788999999999999999999999999999999999999954   34599999998876543221


Q ss_pred             ---cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         .....|++.|+|||++.+ .++.++|+||||
T Consensus       241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG  274 (392)
T PHA03207        241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAG  274 (392)
T ss_pred             cccccccccccCccCHhHhcCCCCCchhhHHHHH
Confidence               223568899999999974 588999999987

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.90  E-value=6.3e-24  Score=135.81  Aligned_cols=90  Identities=22%  Similarity=0.277  Sum_probs=71.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccc---cccccccccccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN---ELVGSLYYMALE   94 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~---~~~~~~~~~~pe   94 (110)
                      .+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||++..........   ...++..|+|||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  286 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPE  286 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC---CCcEEEecCccceeccCcccccccCCCCCCcceeChh
Confidence            3677888999999999999999999999999999999954   3458999999987654322111   122345699999


Q ss_pred             cccc-cCCCccceeecC
Q 033837           95 VLKR-NYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~~-~~~~~~d~wslg  110 (110)
                      .+.+ .++.++|+||||
T Consensus       287 ~~~~~~~~~~sDi~slG  303 (375)
T cd05104         287 SIFNCVYTFESDVWSYG  303 (375)
T ss_pred             HhcCCCCCCCCCHHHHH
Confidence            9874 589999999987

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.90  E-value=5.6e-24  Score=131.16  Aligned_cols=107  Identities=22%  Similarity=0.400  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.. .+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~---~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC---CCcEEEcCCccceeccCCC
Confidence            578999999999976 467899999999999999999999999999999999999954   3458999999887653322


Q ss_pred             c---ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .   .....++..|++||.+. +.++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG  198 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYG  198 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHH
Confidence            1   11234556799999987 4589999999987

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.90  E-value=3.9e-24  Score=129.25  Aligned_cols=105  Identities=21%  Similarity=0.229  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.+...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.+   ..++++|||.+......  
T Consensus        64 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~df~~~~~~~~~--  138 (237)
T cd05576          64 LQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDS--  138 (237)
T ss_pred             EecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC---CCEEEecccchhccccc--
Confidence            6899999999999887789999999999999999999999999999999999999543   34899999976554332  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....++..|++||...+ .++.++|+||+|
T Consensus       139 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  169 (237)
T cd05576         139 CDGEAVENMYCAPEVGGISEETEACDWWSLG  169 (237)
T ss_pred             cccCCcCccccCCcccCCCCCCchhhHHHHH
Confidence            122344667999999874 478899999987

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.90  E-value=3.6e-24  Score=136.32  Aligned_cols=104  Identities=27%  Similarity=0.445  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+ ++.+.+..  .+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++........
T Consensus       108 ~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         108 MELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             EeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC---CCcEEEEeCCCccccCCCCc
Confidence            578865 67766643  4788899999999999999999999999999999999954   34599999999876544333


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||++.+ .++.++|+||||
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG  212 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  212 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHH
Confidence            344577889999999975 488999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA02988 hypothetical protein; Provisional

Probab=99.90  E-value=3.1e-24  Score=132.75  Aligned_cols=105  Identities=16%  Similarity=0.240  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+...+++.....++.+++.|+.++|+ .+++|||++|+|++++.   ...+|++|||++.......
T Consensus       101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~---~~~~kl~dfg~~~~~~~~~  177 (283)
T PHA02988        101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE---NYKLKIICHGLEKILSSPP  177 (283)
T ss_pred             EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC---CCcEEEcccchHhhhcccc
Confidence            6899999999999888889999999999999999999998 48999999999999954   4459999999886553322


Q ss_pred             ccccccccccccccccccc---cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                        ....++..|+|||.+.+   .++.++|+||||
T Consensus       178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG  209 (283)
T PHA02988        178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG  209 (283)
T ss_pred             --ccccCcccccCHHHhhhccccccchhhhhHHH
Confidence              23456788999999864   588999999997

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=141.21  Aligned_cols=106  Identities=23%  Similarity=0.439  Sum_probs=87.9

Q ss_pred             CCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC---C
Q 033837            2 KLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR---P   77 (110)
Q Consensus         2 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~---~   77 (110)
                      -+|+|.+|+.+++-. ..|.-.+.+.|++|+++|+.|||.++|||||||..||++.++   ..|||.|||++....   .
T Consensus       467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~---~kVkIgDFGLatvk~~w~g  543 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED---LKVKIGDFGLATVKTRWSG  543 (678)
T ss_pred             hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC---CcEEEecccceeeeeeecc
Confidence            478999999999743 679999999999999999999999999999999999999543   459999999875432   2


Q ss_pred             cccccccccccccccccccc----ccCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                      ..+.....|...|+|||++.    .+|+..+||||||
T Consensus       544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFG  580 (678)
T KOG0193|consen  544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFG  580 (678)
T ss_pred             ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhh
Confidence            22334456778899999986    2389999999998

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.90  E-value=3.5e-24  Score=140.05  Aligned_cols=105  Identities=31%  Similarity=0.450  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||.+.++.+.+.+.+...+. ..+..|+++++.|+.|||++|++|||++|.||+++  +....++++|||........  
T Consensus       395 ~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  395 MELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             ehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchh--
Confidence            68888899988887776666 88889999999999999999999999999999995  23345999999988776554  


Q ss_pred             ccccccccccccccccccc-CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ..+.+-|..|.|||++..+ |+.++|+||||
T Consensus       470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLG  500 (612)
T KOG0603|consen  470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLG  500 (612)
T ss_pred             hcccchhhcccChhhhccCCCCcchhhHHHH
Confidence            2334557789999999854 99999999997

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=7.1e-24  Score=130.65  Aligned_cols=107  Identities=20%  Similarity=0.295  Sum_probs=87.1

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++...                ..+++..+..++.|++.|+.|||+++++|+|++|+||+++.   ...+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~---~~~~  163 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE---GLTV  163 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC---CCcE
Confidence            6899999999998754                44778899999999999999999999999999999999954   3459


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +++|||++........   .....+++.|+|||.+. +.++.++|+||||
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG  213 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFG  213 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHH
Confidence            9999998876533221   12234567899999886 4588999999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.90  E-value=9.2e-24  Score=130.77  Aligned_cols=105  Identities=28%  Similarity=0.474  Sum_probs=90.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.++|+++++|+||+|.||+++.   ...++++|||.+......  
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~---~~~~kl~dfg~~~~~~~~--  154 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGR--  154 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC---CCCEEEeeCCCccccCCC--
Confidence            689999999999988889999999999999999999999999999999999999954   345999999988765443  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.+ .++.++|+||||
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  185 (290)
T cd05580         155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALG  185 (290)
T ss_pred             CCCCCCCccccChhhhcCCCCCccccHHHHH
Confidence            233467888999998874 477889999987

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=5.8e-24  Score=146.87  Aligned_cols=110  Identities=27%  Similarity=0.510  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc-------CCeecCCCCCceEEEeCC----------
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKH-------GVMHHDLNPKKILFVNKK----------   59 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-------~i~h~~l~~~~il~~~~~----------   59 (110)
                      |||+++|+|.+++..    .+.+++..+..++.||+.||.|||+.       +|+|+||+|+||++....          
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            799999999998864    25799999999999999999999984       499999999999996421          


Q ss_pred             ----CCceEEEeecccceecCCccccccccccccccccccccc---cCCCccceeecC
Q 033837           60 ----KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        60 ----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                          ....++|+|||++..+..........+++.|+|||++.+   .++.++|+||||
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG  230 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG  230 (1021)
T ss_pred             cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence                123489999999876644333334578999999999852   378899999997

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.90  E-value=7.3e-24  Score=135.27  Aligned_cols=106  Identities=28%  Similarity=0.487  Sum_probs=87.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. ++|.+.+.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++....... 
T Consensus        83 ~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          83 TELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             eeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC---CCCEEeccccceeecccCcc
Confidence            57776 588888877788999999999999999999999999999999999999954   4469999999887653322 


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  192 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVG  192 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHH
Confidence             1223456888999999874  378899999997

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=8.6e-24  Score=128.86  Aligned_cols=107  Identities=24%  Similarity=0.381  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.++|+++++|+|++|.||+++.   ...++++|||.+........
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~---~~~~kl~Dfg~~~~~~~~~~  150 (257)
T cd05116          74 MELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT---QHYAKISDFGLSKALGADEN  150 (257)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC---CCeEEECCCccccccCCCCC
Confidence            689999999999988788999999999999999999999999999999999999954   44599999998876543321


Q ss_pred             c----cccccccccccccccc-ccCCCccceeecC
Q 033837           81 F----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    ....++..|++||.+. ..++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  185 (257)
T cd05116         151 YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFG  185 (257)
T ss_pred             eeeecCCCCCCccccCHhHhccCCcCchhHHHHHH
Confidence            1    1122346799999886 4578899999987

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.90  E-value=1.8e-23  Score=129.12  Aligned_cols=107  Identities=20%  Similarity=0.318  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+. ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+..+....
T Consensus        87 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~---~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          87 MEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC---CCCEEECCCccccccccCc
Confidence            6899999999998665 46899999999999999999999999999999999999954   3458999999887654322


Q ss_pred             c----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    .....++..|+|||.+.+ .++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  199 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFG  199 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCCccccchhhh
Confidence            1    112345567999998874 488899999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=1.1e-23  Score=130.79  Aligned_cols=107  Identities=22%  Similarity=0.272  Sum_probs=83.7

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++++|.+++.+..                .+++..+..++.|++.|+.++|+++++|+||+|+||+++.   ...+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE---NLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC---CCeE
Confidence            58899999999986532                4788999999999999999999999999999999999954   3458


Q ss_pred             EEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||++..............+..|++||...+ .++.++|+||||
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG  205 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFG  205 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHH
Confidence            9999998754322111111122346999998874 488999999997

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=5.8e-24  Score=130.30  Aligned_cols=107  Identities=15%  Similarity=0.242  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~---~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC---CCcEEECCCcccccccccc
Confidence            7999999999998764 57899999999999999999999999999999999999953   4468999999765432221


Q ss_pred             ccc--ccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ...++..|+|||.+. ..++.++|+||||
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  195 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFG  195 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHH
Confidence            111  123346799999887 4588999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=1.8e-23  Score=127.22  Aligned_cols=107  Identities=23%  Similarity=0.470  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++..  ...+++.++..++.+++.++.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~---~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR---TNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec---CCcEEEecccceEEeccc
Confidence            689999999999875  346899999999999999999999999999999999999954   345999999988765432


Q ss_pred             c-ccccccccccccccccccc-cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . ......+++.|+|||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  189 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALG  189 (257)
T ss_pred             CCccccccCCcCccChhHhcCCCCCchhhhHHHH
Confidence            2 2233457788999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=9.5e-24  Score=128.29  Aligned_cols=107  Identities=22%  Similarity=0.294  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAK---------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      |||+++++|.+++...         ..+++.++..++.|++.|+.++|+++++|+|++|+||+++.+   ..++++|||.
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~---~~~~l~dfg~  151 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED---LVVKISDFGL  151 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC---CcEEEccccc
Confidence            6899999999999875         779999999999999999999999999999999999999543   4599999998


Q ss_pred             ceecCCcc---ccccccccccccccccccc-cCCCccceeecC
Q 033837           72 SVFFRPRE---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +.......   ......+++.|++||.... .++.++|+||+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (262)
T cd00192         152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG  194 (262)
T ss_pred             ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHH
Confidence            87664432   1122345678999998874 588899999987

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.90  E-value=9.9e-24  Score=129.45  Aligned_cols=107  Identities=21%  Similarity=0.279  Sum_probs=83.7

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.+..                .+++.++..++.|++.|+.|+|+++++|+|++|+||+++   ....+
T Consensus        75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~  151 (270)
T cd05047          75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVA  151 (270)
T ss_pred             EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeE
Confidence            68999999999986532                478899999999999999999999999999999999995   34569


Q ss_pred             EEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||++..............+..|++||.+.. .++.++|+||||
T Consensus       152 kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  198 (270)
T cd05047         152 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG  198 (270)
T ss_pred             EECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHH
Confidence            9999998753221111111122456999998864 488899999987

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=1.4e-23  Score=132.61  Aligned_cols=90  Identities=22%  Similarity=0.256  Sum_probs=72.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc---cccccccccccccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALE   94 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe   94 (110)
                      +++..++..++.|++.|+.|+|+++++|+|++|.||+++.+   ..++++|||++..+.....   .....++..|+|||
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~---~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC---CcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            57889999999999999999999999999999999999643   4589999999876533221   11123456799999


Q ss_pred             cccc-cCCCccceeecC
Q 033837           95 VLKR-NYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~~-~~~~~~d~wslg  110 (110)
                      .+.+ .++.++|+||||
T Consensus       246 ~~~~~~~~~~~Di~SlG  262 (337)
T cd05054         246 SIFDKVYTTQSDVWSFG  262 (337)
T ss_pred             HhcCCCCCccccHHHHH
Confidence            8874 589999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.4e-23  Score=128.06  Aligned_cols=107  Identities=30%  Similarity=0.441  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+.+.+.+.+++..+..++.|++.|+.++|+.+++|+|++|+||+++.+   ..++++|||.+........
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~---~~~~l~dfg~~~~~~~~~~  159 (263)
T cd06625          83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICS  159 (263)
T ss_pred             EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccceecccccc
Confidence            5889999999999888889999999999999999999999999999999999999543   4599999998865433211


Q ss_pred             c----ccccccccccccccccc-cCCCccceeecC
Q 033837           81 F----NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~----~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    ....++..|+|||.+.+ .++.++|+||+|
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (263)
T cd06625         160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVG  194 (263)
T ss_pred             ccccccCCCcCccccCcceeccCCCCchhhhHHHH
Confidence            1    22456778999999985 488999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.90  E-value=1.4e-23  Score=128.37  Aligned_cols=107  Identities=27%  Similarity=0.458  Sum_probs=89.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+.+++.++..++.|++.|+.|+|+.+++|+|++|.||+++.   ...++++|||.+........
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~---~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD---NGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCCEEECcCccceeeccccc
Confidence            689999999999987788999999999999999999999999999999999999943   44599999998876543221


Q ss_pred             -ccccccccccccccccc----ccCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.    ..++.++|+||+|
T Consensus       162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G  196 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVG  196 (267)
T ss_pred             ccCccccCccccCHhHcccccCCCCcchhhHHHHH
Confidence             22346778899999874    2367889999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.90  E-value=1.2e-23  Score=129.54  Aligned_cols=110  Identities=16%  Similarity=0.257  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAKG-------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      |||+++++|.+++....       .+++.++..++.|++.|+.|||+++++|+|++|+||+++..+....++++|||.+.
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~  167 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR  167 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcccc
Confidence            68999999999986542       48889999999999999999999999999999999999765544568999999887


Q ss_pred             ecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           74 FFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ........   .....+..|++||.+. +.++.++|+||||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  208 (277)
T cd05036         168 DIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFG  208 (277)
T ss_pred             ccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHH
Confidence            65322111   1122245699999987 4589999999987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=1.5e-23  Score=127.92  Aligned_cols=107  Identities=23%  Similarity=0.351  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.. ...+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        73 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~dfg~~~~~~~~~  149 (257)
T cd05115          73 MEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN---QHYAKISDFGLSKALGADD  149 (257)
T ss_pred             EEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC---CCcEEeccCCccccccCCc
Confidence            689999999999875 467999999999999999999999999999999999999954   3459999999887543322


Q ss_pred             cc-cc---ccccccccccccccc-cCCCccceeecC
Q 033837           80 QF-NE---LVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~-~~---~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. ..   ..+++.|++||.+.. .++.++|+||||
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  185 (257)
T cd05115         150 SYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYG  185 (257)
T ss_pred             cceeccCCCCCCcccCCHHHHccCCCCchhhHHHHH
Confidence            11 11   122457999998874 578899999987

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=1.5e-23  Score=129.71  Aligned_cols=107  Identities=21%  Similarity=0.292  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEe
Q 033837            1 MKLCEEGELVDRIVAKG-------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI   67 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~   67 (110)
                      |||+++++|.+++...+             .+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~---~~~~kl~  162 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE---NLLVKIG  162 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc---CCcEEec
Confidence            68999999999986443             4899999999999999999999999999999999999954   4458999


Q ss_pred             ecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           68 DFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        68 d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |||.+........   .....++..|+|||.+.+ .++.++|+||||
T Consensus       163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG  209 (288)
T cd05093         163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  209 (288)
T ss_pred             cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHH
Confidence            9998875533221   112234567999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=1.8e-23  Score=129.55  Aligned_cols=107  Identities=20%  Similarity=0.256  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++++|.+++...                +.+++..+..++.|++.|+.++|+++++|+||+|+||+++.   ...+
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~---~~~~  162 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLV  162 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc---CCcE
Confidence            6899999999998653                23788999999999999999999999999999999999954   4469


Q ss_pred             EEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||.+........   .....++..|++||.+.+ .++.++|+||||
T Consensus       163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (291)
T cd05094         163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  212 (291)
T ss_pred             EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence            9999998865533221   112345677999998874 578899999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.89  E-value=1.1e-23  Score=144.80  Aligned_cols=109  Identities=16%  Similarity=0.156  Sum_probs=83.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC----------------CCCce
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK----------------KKSFS   63 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~----------------~~~~~   63 (110)
                      |||+ +++|.+++... ..+++.++..++.||+.||.|||+++|+||||||+||++...                +....
T Consensus        59 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~  137 (793)
T PLN00181         59 LECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDAT  137 (793)
T ss_pred             hccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCc
Confidence            4665 56999999653 569999999999999999999999999999999999999531                11234


Q ss_pred             EEEeecccceecCCcc-----------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           64 LKAIDFGLSVFFRPRE-----------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        64 ~~l~d~g~~~~~~~~~-----------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +|++|||+++......                 ......+|++|+|||++.+ .|+.++|+||||
T Consensus       138 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlG  202 (793)
T PLN00181        138 TKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLG  202 (793)
T ss_pred             ccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHH
Confidence            6777888765421100                 0011357888999999874 589999999997

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.89  E-value=1.3e-23  Score=128.46  Aligned_cols=107  Identities=28%  Similarity=0.438  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.+...+++..+..++.|++.++.++|+++++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          85 MEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS---VGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC---CCCEEECcCccccccccccc
Confidence            588999999999987778899999999999999999999999999999999999953   4458999999876543211 


Q ss_pred             ---ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         ......++..|++||.+.+ .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  196 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVG  196 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHH
Confidence               1122457788999998874 478899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=3.3e-23  Score=127.82  Aligned_cols=106  Identities=24%  Similarity=0.354  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.. ..+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        87 ~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          87 MEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             ecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC---CCcEEEeecccccccCCcch
Confidence            689999999998865 45999999999999999999999999999999999999954   34589999998876543221


Q ss_pred             c----cccccccccccccccc-ccCCCccceeecC
Q 033837           81 F----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    ....++..|++||.+. ..++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG  197 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFG  197 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHH
Confidence            1    1123455699999887 4588999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=2.8e-23  Score=127.16  Aligned_cols=107  Identities=21%  Similarity=0.255  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC----CceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK----SFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~----~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|..++... ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++.    ...++++|||.+...
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077          83 EEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             EecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            6899999999888654 67899999999999999999999999999999999999964331    123799999987554


Q ss_pred             CCcccccccccccccccccccc--ccCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                      ...   ....++..|+|||.+.  ..++.++|+||||
T Consensus       163 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  196 (262)
T cd05077         163 LSR---QECVERIPWIAPECVEDSKNLSIAADKWSFG  196 (262)
T ss_pred             cCc---ccccccccccChhhhcCCCCCCchhHHHHHH
Confidence            322   1234677899999886  3488899999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=8.7e-24  Score=145.34  Aligned_cols=107  Identities=21%  Similarity=0.329  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAK-------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      +|||++|||.+++.+.       ..++...+..++.+|+.|+.||+++..+||||..+|+|++..   ..+|++|||+++
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~---r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER---RVVKIADFGLAR  850 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc---CcEEEcccchhH
Confidence            6999999999999765       348889999999999999999999999999999999999643   569999999998


Q ss_pred             ecCCcccccccc-c--ccccccccccc-ccCCCccceeecC
Q 033837           74 FFRPREQFNELV-G--SLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~~~~~~-~--~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .+....-..... +  ...|||||.+. +.|+.++|+||||
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFG  891 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFG  891 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccccccchhhhH
Confidence            654433222211 1  24599999998 6799999999998

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.89  E-value=2.4e-23  Score=130.03  Aligned_cols=106  Identities=26%  Similarity=0.444  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+.+++++..+..++.|++.|+.|+|+ .+++|+|++|+||+++.+   ..++++|||.+.......
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~  154 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM  154 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC---CcEEEccCCCcccccccc
Confidence            6899999999999888889999999999999999999997 589999999999999643   458999999876543321


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.+ .++.++|+||||
T Consensus       155 -~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG  185 (308)
T cd06615         155 -ANSFVGTRSYMSPERLQGTHYTVQSDIWSLG  185 (308)
T ss_pred             -cccCCCCcCccChhHhcCCCCCccchHHHHH
Confidence             233567888999998875 478899999987

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.89  E-value=9e-24  Score=127.81  Aligned_cols=92  Identities=32%  Similarity=0.506  Sum_probs=80.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccccc
Q 033837           16 KGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALE   94 (110)
Q Consensus        16 ~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe   94 (110)
                      +++++|..+-++...+++|+.||-. .+|+|||+||+||+++   .++.+|++|||.+-.+.+........|.+.|++||
T Consensus       185 k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPE  261 (391)
T KOG0983|consen  185 KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPE  261 (391)
T ss_pred             cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCCEEeecccccceeecccccccccCCccccCcc
Confidence            4779999999999999999999986 4899999999999994   45669999999998887776666678899999999


Q ss_pred             ccc----ccCCCccceeecC
Q 033837           95 VLK----RNYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~----~~~~~~~d~wslg  110 (110)
                      .+.    ..|+.++|+||||
T Consensus       262 Ridp~~~~kYDiRaDVWSlG  281 (391)
T KOG0983|consen  262 RIDPPDKPKYDIRADVWSLG  281 (391)
T ss_pred             ccCCCCCCccchhhhhhhhc
Confidence            985    2389999999998

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.89  E-value=4.5e-23  Score=127.71  Aligned_cols=107  Identities=22%  Similarity=0.340  Sum_probs=85.9

Q ss_pred             CCCcCCCCHHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVA----------------KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++..                ...+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...+
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~---~~~~  171 (293)
T cd05053          95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE---DHVM  171 (293)
T ss_pred             EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC---CCeE
Confidence            689999999999854                245888999999999999999999999999999999999954   3458


Q ss_pred             EEeecccceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +++|||.+.........   ....++..|++||.+. ..++.++|+||||
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  221 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  221 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehh
Confidence            99999988765432211   1122345699999886 4588999999998

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.89  E-value=4.1e-23  Score=126.05  Aligned_cols=107  Identities=26%  Similarity=0.473  Sum_probs=90.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+...+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        72 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~---~~~~~l~df~~~~~~~~~~~  148 (262)
T cd05572          72 MEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS---NGYVKLVDFGFAKKLKSGQK  148 (262)
T ss_pred             EecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC---CCCEEEeeCCcccccCcccc
Confidence            689999999999988778999999999999999999999999999999999999954   34599999998876654332


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.. .++.++|+||+|
T Consensus       149 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG  179 (262)
T cd05572         149 TWTFCGTPEYVAPEIILNKGYDFSVDYWSLG  179 (262)
T ss_pred             cccccCCcCccChhHhcCCCCCChhhhhhhH
Confidence            233467788999998864 478899999987

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=4.1e-23  Score=127.95  Aligned_cols=107  Identities=19%  Similarity=0.284  Sum_probs=87.6

Q ss_pred             CCCcCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeec
Q 033837            1 MKLCEEGELVDRIVAKG-----------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF   69 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~   69 (110)
                      |||+++++|.+++....           .+++..+..++.|++.|+.|||+.+++|+|++|+||+++.   ...++++||
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~---~~~~~l~df  174 (296)
T cd05051          98 MEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK---NYTIKIADF  174 (296)
T ss_pred             EecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecC---CCceEEccc
Confidence            68899999999997654           6899999999999999999999999999999999999954   356899999


Q ss_pred             ccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           70 GLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        70 g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |.+........   .....+++.|++||.+.+ .++.++|+||||
T Consensus       175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  219 (296)
T cd05051         175 GMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG  219 (296)
T ss_pred             cceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhH
Confidence            98876433221   112334567999998874 588999999997

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.89  E-value=3.4e-23  Score=130.88  Aligned_cols=102  Identities=22%  Similarity=0.442  Sum_probs=83.5

Q ss_pred             CCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc
Q 033837            2 KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF   81 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~   81 (110)
                      |++ +++|.+.+. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++......  .
T Consensus       100 ~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~---~~~~kl~Dfg~~~~~~~~--~  172 (343)
T cd07878         100 NLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE---DCELRILDFGLARQADDE--M  172 (343)
T ss_pred             ecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC---CCCEEEcCCccceecCCC--c
Confidence            444 568877664 457999999999999999999999999999999999999954   345999999988765432  2


Q ss_pred             ccccccccccccccccc--cCCCccceeecC
Q 033837           82 NELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        82 ~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ....+++.|+|||.+.+  .++.++|+||+|
T Consensus       173 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  203 (343)
T cd07878         173 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVG  203 (343)
T ss_pred             CCccccccccCchHhcCCccCCchhhhHhHH
Confidence            34567889999999864  478899999987

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.89  E-value=6.9e-24  Score=146.39  Aligned_cols=107  Identities=29%  Similarity=0.522  Sum_probs=84.3

Q ss_pred             CCCcCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC---
Q 033837            1 MKLCEEGELVDRIVAKGHY-TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR---   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~---   76 (110)
                      ||||+.-++.+++..+... ....+..++++|+.|+.|+|++|+|||||||.||+++.++   .|||+|||++....   
T Consensus       675 MEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~---~VKIGDFGLAt~~~~~~  751 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN---SVKIGDFGLATDLKENL  751 (1351)
T ss_pred             HhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC---Ceeecccccchhhhhhh
Confidence            8999985555555544333 3677899999999999999999999999999999997444   49999999987621   


Q ss_pred             -C--------------c-ccccccccccccccccccc--c--cCCCccceeecC
Q 033837           77 -P--------------R-EQFNELVGSLYYMALEVLK--R--NYGPEVDVWSML  110 (110)
Q Consensus        77 -~--------------~-~~~~~~~~~~~~~~pe~~~--~--~~~~~~d~wslg  110 (110)
                       .              . ......+||-.|+|||++.  .  +|+.++||||||
T Consensus       752 ~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLG  805 (1351)
T KOG1035|consen  752 ESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLG  805 (1351)
T ss_pred             hhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHH
Confidence             0              0 0123468899999999986  3  499999999998

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.89  E-value=2.9e-23  Score=126.43  Aligned_cols=105  Identities=21%  Similarity=0.332  Sum_probs=85.6

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+..  .+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASST  155 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC---CCcEEecCCccceecccc
Confidence            68999999999987643  4889999999999999999999999999999999999954   345899999987654332


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .  .....+..|++||...+ .++.++|+||||
T Consensus       156 ~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  186 (256)
T cd05082         156 Q--DTGKLPVKWTAPEALREKKFSTKSDVWSFG  186 (256)
T ss_pred             C--CCCccceeecCHHHHccCCCCchhhhHHHH
Confidence            2  12233457999998874 488899999987

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.89  E-value=2.2e-23  Score=129.45  Aligned_cols=100  Identities=21%  Similarity=0.324  Sum_probs=79.5

Q ss_pred             CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc--------
Q 033837            8 ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE--------   79 (110)
Q Consensus         8 ~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~--------   79 (110)
                      ++.+.+......++..+..++.|++.|+.|+|+++++||||||+||+++.   ...++++|||++..+....        
T Consensus       112 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~---~~~~~l~DFGla~~~~~~~~~~~~~~~  188 (294)
T PHA02882        112 NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG---NNRGYIIDYGIASHFIIHGKHIEYSKE  188 (294)
T ss_pred             CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCcEEEEEcCCceeeccCCcccccccc
Confidence            55555555555788889999999999999999999999999999999953   3458999999987653211        


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......||+.|+|||+..+ .++.++|+||||
T Consensus       189 ~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG  220 (294)
T PHA02882        189 QKDLHRGTLYYAGLDAHNGACVTRRGDLESLG  220 (294)
T ss_pred             cccccCCCccccCHHHhCCCCCCcHHHHHHHH
Confidence            1122468899999999875 489999999987

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.89  E-value=3e-23  Score=129.24  Aligned_cols=107  Identities=21%  Similarity=0.304  Sum_probs=85.6

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.+.                ..++..++..++.|++.|+.|||+++++|+||+|+||+++.   ...+
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~---~~~~  176 (304)
T cd05101         100 VEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE---NNVM  176 (304)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC---CCcE
Confidence            6899999999998753                24677888999999999999999999999999999999953   3458


Q ss_pred             EEeecccceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||.+.........   ....+++.|+|||.+.+ .++.++|+||||
T Consensus       177 kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  226 (304)
T cd05101         177 KIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  226 (304)
T ss_pred             EECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHH
Confidence            99999988765432211   11234567999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.89  E-value=7e-24  Score=129.02  Aligned_cols=107  Identities=35%  Similarity=0.587  Sum_probs=91.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-CCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-~~~~   79 (110)
                      |||+.+++|.+++.....+++..+..++.|++.|+.+||+.+++|+||+|+||+++   ....++++|||.+... ....
T Consensus        77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~~~~~~  153 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKLSENNE  153 (260)
T ss_dssp             EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTEESTSTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccc
Confidence            57899889999998778899999999999999999999999999999999999994   4456899999988763 2223


Q ss_pred             cccccccccccccccccc-c-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      ......+++.|.|||... + .++.++|+||+|
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  186 (260)
T PF00069_consen  154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLG  186 (260)
T ss_dssp             EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccc
Confidence            334456788999999987 4 478999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=3.3e-23  Score=127.57  Aligned_cols=107  Identities=21%  Similarity=0.262  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC----CCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK----KSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~----~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|..++.+ .+.+++..+..++.|++.|+.|+|+++++|+||+|+||+++..+    ....++++|||.+...
T Consensus        95 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076          95 EEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccc
Confidence            699999999998865 46789999999999999999999999999999999999996432    2235799999976543


Q ss_pred             CCccccccccccccccccccccc--cCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ...   ....++..|++||.+.+  .++.++|+||||
T Consensus       175 ~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG  208 (274)
T cd05076         175 LSR---EERVERIPWIAPECVPGGNSLSTAADKWSFG  208 (274)
T ss_pred             ccc---cccccCCcccCchhhcCCCCCCcHHHHHHHH
Confidence            222   12345678999998863  378899999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=3.6e-23  Score=126.20  Aligned_cols=104  Identities=28%  Similarity=0.367  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+.....   
T Consensus        76 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~---  149 (260)
T cd05611          76 MEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ---TGHLKLTDFGLSRNGLE---  149 (260)
T ss_pred             EeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCcEEEeecccceeccc---
Confidence            589999999999988888999999999999999999999999999999999999954   34599999998765432   


Q ss_pred             ccccccccccccccccccc-CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.+. ++.++|+||+|
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  180 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLG  180 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHH
Confidence            1223567789999998754 78899999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.89  E-value=6.7e-23  Score=124.72  Aligned_cols=107  Identities=25%  Similarity=0.462  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|++.+++..  ...+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ---NGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC---CCcEEEcccCcceeeccc
Confidence            689999999998864  346899999999999999999999999999999999999953   445999999988765432


Q ss_pred             cc-cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG  187 (255)
T cd08219         154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLG  187 (255)
T ss_pred             ccccccccCCccccCHHHHccCCcCchhhhhhhc
Confidence            22 223467788999999874 478899999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.89  E-value=2.8e-23  Score=127.88  Aligned_cols=107  Identities=26%  Similarity=0.375  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+..  .+++..+..++.|++.++.|+|+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~---~~~~~l~dfg~~~~~~~~  148 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD---HGNVRISDLGLAVELKGG  148 (277)
T ss_pred             EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEccCcchhhhccC
Confidence            68999999999987654  7999999999999999999999999999999999999954   345999999987655432


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......++..|++||.+.+ .++.++|+||+|
T Consensus       149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  181 (277)
T cd05577         149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALG  181 (277)
T ss_pred             CccccccCCCCcCCHHHhcCCCCCchhhhHHHH
Confidence            22233456778999999874 478899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=5.8e-23  Score=125.34  Aligned_cols=107  Identities=18%  Similarity=0.281  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC-----CceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK-----SFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~-----~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++.     ...++++|||.+..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            6899999999999765 46899999999999999999999999999999999999975432     22478999998755


Q ss_pred             cCCccccccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ....   ....+++.|++||.+.+  .++.++|+||||
T Consensus       158 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  192 (258)
T cd05078         158 VLPK---EILLERIPWVPPECIENPQNLSLAADKWSFG  192 (258)
T ss_pred             cCCc---hhccccCCccCchhccCCCCCCchhhHHHHH
Confidence            4332   22356778999999874  378899999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.89  E-value=6.1e-23  Score=125.06  Aligned_cols=107  Identities=28%  Similarity=0.425  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+++|.+++.+..++++..+..++.|++.++.|+|+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~---~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE---QGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC---CCCEEEeecccccccCCCcc
Confidence            589999999999987788999999999999999999999999999999999999954   34589999998776544433


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....++..|++||.+.. .++.++|+||+|
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  186 (258)
T cd05578         156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLG  186 (258)
T ss_pred             ccccCCChhhcCHHHHcccCCCCcccchhhH
Confidence            334567778999999874 478899999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.89  E-value=5e-23  Score=125.25  Aligned_cols=107  Identities=28%  Similarity=0.493  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++++|.+++.+.  ..+++.++..++.|++.++.++|+.+++|+|++|+||+++.+   ..++++|||.+......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~---~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA---GLIKLGDFGISKILGSE  154 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC---CCEEECcCcceEEcccc
Confidence            6899999999999764  568999999999999999999999999999999999999653   35999999988765332


Q ss_pred             c-ccccccccccccccccccc-cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . ......+++.|.+||.+.+ .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG  188 (256)
T cd08221         155 YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALG  188 (256)
T ss_pred             cccccccCCCccccCHhhcCCCCCCCcchhHHHH
Confidence            2 2233467889999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.89  E-value=3.3e-23  Score=127.51  Aligned_cols=107  Identities=20%  Similarity=0.308  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAKG----------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      |||+++|+|.+++.+..          .+....+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~---~~~~~l~dfg  164 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFG  164 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC---CCCEEECCCC
Confidence            68999999999986531          2567788999999999999999999999999999999954   4458999999


Q ss_pred             cceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           71 LSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .+.........   ....+++.|+|||.+. +.++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  208 (277)
T cd05062         165 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  208 (277)
T ss_pred             CccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHH
Confidence            87655332211   1123456799999987 4588999999987

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=4.8e-23  Score=125.51  Aligned_cols=107  Identities=21%  Similarity=0.319  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.++.+||.++++|+||+|+||+++.   ...++++|||.+........
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~---~~~~kl~df~~~~~~~~~~~  150 (257)
T cd05060          74 MELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN---RHQAKISDFGMSRALGAGSD  150 (257)
T ss_pred             EEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC---CCcEEeccccccceeecCCc
Confidence            588999999999988778999999999999999999999999999999999999954   34599999998876533222


Q ss_pred             c-cc---cccccccccccccc-ccCCCccceeecC
Q 033837           81 F-NE---LVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~-~~---~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      . ..   ..++..|++||.+. ..++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  185 (257)
T cd05060         151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYG  185 (257)
T ss_pred             ccccccCccccccccCHHHhcCCCCCccchHHHHH
Confidence            1 11   12235699999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.89  E-value=5e-23  Score=132.67  Aligned_cols=90  Identities=20%  Similarity=0.258  Sum_probs=72.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc---ccccccccccccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALE   94 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe   94 (110)
                      .+++..+..++.|++.|+.|+|+.+++|+||+|.||+++.   ...++++|||++.........   ....+++.|+|||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~---~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  309 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ---GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE  309 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC---CCEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence            3677788899999999999999999999999999999954   345899999988765332211   1234556799999


Q ss_pred             cccc-cCCCccceeecC
Q 033837           95 VLKR-NYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~~-~~~~~~d~wslg  110 (110)
                      .+.+ .++.++|+||||
T Consensus       310 ~~~~~~~~~~~DiwSlG  326 (400)
T cd05105         310 SIFDNLYTTLSDVWSYG  326 (400)
T ss_pred             hhcCCCCCchhhHHHHH
Confidence            8874 488999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.89  E-value=2.1e-23  Score=128.02  Aligned_cols=109  Identities=25%  Similarity=0.447  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIV-----AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~   74 (110)
                      +||.+. ||.+.++     +...++...++.++-||++|+.|||++=++||||||.||++..++ .++.|||+|+|+++.
T Consensus       107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~  185 (438)
T KOG0666|consen  107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARL  185 (438)
T ss_pred             ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence            467776 8888774     235699999999999999999999999999999999999997443 467899999999988


Q ss_pred             cCCccc----cccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPREQ----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      +.+...    ....+-|.+|+|||.+.+  .|+++.|+|+.|
T Consensus       186 ~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiG  227 (438)
T KOG0666|consen  186 FNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIG  227 (438)
T ss_pred             hhccccccccCCceEEEEEecChHHhcccccccchhhhHHHH
Confidence            755432    233456889999999985  399999999986

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=5.7e-23  Score=126.41  Aligned_cols=107  Identities=21%  Similarity=0.283  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK--------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA   66 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l   66 (110)
                      |||+++++|.+++...              ..+++.++..++.|++.|+.++|+++++|+|++|+||+++.   ...+++
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~---~~~~kl  163 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY---DLVVKI  163 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC---CCeEEE
Confidence            6899999999998653              24788899999999999999999999999999999999954   356999


Q ss_pred             eecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           67 IDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        67 ~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +|||.+........   .....+++.|+|||.+. +.++.++|+||||
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  211 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHH
Confidence            99998875432211   11223456799999987 4588899999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.89  E-value=4.6e-23  Score=126.37  Aligned_cols=107  Identities=28%  Similarity=0.533  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.|||+++++|+|++|+||+++.   ...++++|||++......
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~---~~~~~l~Dfg~~~~~~~~  164 (272)
T cd06637          88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE---NAEVKLVDFGVSAQLDRT  164 (272)
T ss_pred             EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC---CCCEEEccCCCceecccc
Confidence            6899999999998753  46899999999999999999999999999999999999954   345999999988765322


Q ss_pred             c-cccccccccccccccccc------ccCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      . ......+++.|++||.+.      ..++.++|+||+|
T Consensus       165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  203 (272)
T cd06637         165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  203 (272)
T ss_pred             cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence            1 223356788899999874      1377899999987

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=2.3e-23  Score=139.60  Aligned_cols=107  Identities=21%  Similarity=0.342  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhC----------CC----CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK----------GH----YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA   66 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------~~----~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l   66 (110)
                      +|||..|||.++|...          ..    ++..+...++.||+.|+.||.++..+||||..+|+++   +....|||
T Consensus       568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~l~VKI  644 (774)
T KOG1026|consen  568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GENLVVKI  644 (774)
T ss_pred             EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccceEEEe
Confidence            5999999999999622          12    7889999999999999999999999999999999999   66678999


Q ss_pred             eecccceecCCccccccccc---ccccccccccc-ccCCCccceeecC
Q 033837           67 IDFGLSVFFRPREQFNELVG---SLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        67 ~d~g~~~~~~~~~~~~~~~~---~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +|||+++..-+..-......   ...||+||.+. +.|++++||||+|
T Consensus       645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~G  692 (774)
T KOG1026|consen  645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFG  692 (774)
T ss_pred             cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhh
Confidence            99999987655432221111   34699999887 7899999999998

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.89  E-value=4e-23  Score=142.06  Aligned_cols=107  Identities=23%  Similarity=0.331  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeec
Q 033837            1 MKLCEEGELVDRIVAK-----------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF   69 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~   69 (110)
                      |||++||+|.+++...           ...+...+..++.|++.|+.|+|+++++||||+|+||+++.+   ..++++||
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d---g~vKLiDF  157 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLF---GEVVILDW  157 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCC---CCEEEEec
Confidence            7899999999988531           224456778899999999999999999999999999999543   45899999


Q ss_pred             ccceecCCcc-------------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           70 GLSVFFRPRE-------------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        70 g~~~~~~~~~-------------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |.+.......                   ......|++.|+|||.+.+ .++.++|+||+|
T Consensus       158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLG  218 (932)
T PRK13184        158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALG  218 (932)
T ss_pred             CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHH
Confidence            9887651100                   0012368899999999874 488899999997

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.89  E-value=3.3e-23  Score=129.46  Aligned_cols=109  Identities=22%  Similarity=0.426  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC-CCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVA---------KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~-~~~~~~~l~d~g   70 (110)
                      |||+.+ ++.+++..         ...+++..+..++.|++.|+.|+|+.+++|+||+|+||++... +....++++|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            467764 77776642         1248889999999999999999999999999999999999533 234569999999


Q ss_pred             cceecCCcc----ccccccccccccccccccc--cCCCccceeecC
Q 033837           71 LSVFFRPRE----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ++.......    ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  203 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHH
Confidence            987653321    1223467888999998864  378899999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=2.9e-23  Score=135.58  Aligned_cols=106  Identities=24%  Similarity=0.373  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||++. ++|.+++... ..+++.++..++.|++.||.|+|+++|+||||||+||+++.   ...++|+|||++.......
T Consensus       239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~---~~~vkL~DFGla~~~~~~~  314 (461)
T PHA03211        239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG---PEDICLGDFGAACFARGSW  314 (461)
T ss_pred             EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC---CCCEEEcccCCceeccccc
Confidence            45664 6888888654 57999999999999999999999999999999999999954   3458999999987653321


Q ss_pred             c---cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .   .....|++.|++||++.+ .++.++|+||||
T Consensus       315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlG  349 (461)
T PHA03211        315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAG  349 (461)
T ss_pred             ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHH
Confidence            1   123468999999999975 488999999997

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.89  E-value=6.5e-23  Score=124.88  Aligned_cols=107  Identities=20%  Similarity=0.363  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... +.+++..+..++.+++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05114          78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS---TGVVKVSDFGMTRYVLDDE  154 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC---CCeEEECCCCCccccCCCc
Confidence            6899999999998753 56899999999999999999999999999999999999953   4458999999876553322


Q ss_pred             ccc--cccccccccccccccc-cCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...  ...++..|+|||.+.+ .++.++|+||||
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G  188 (256)
T cd05114         155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFG  188 (256)
T ss_pred             eeccCCCCCchhhCChhhcccCccchhhhhHHHH
Confidence            211  1233456999999874 588899999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=4.9e-23  Score=125.50  Aligned_cols=107  Identities=20%  Similarity=0.331  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.. .+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~kl~dfg~~~~~~~~~  154 (256)
T cd05059          78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE---DNVVKVSDFGLARYVLDDQ  154 (256)
T ss_pred             EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC---CCcEEECCcccceeccccc
Confidence            689999999999875 357899999999999999999999999999999999999954   4459999999887654322


Q ss_pred             ccc--ccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ...++..|++||.+. ..++.++|+||||
T Consensus       155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG  188 (256)
T cd05059         155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFG  188 (256)
T ss_pred             ccccCCCCCCccccCHHHhccCCCCchhhHHHHH
Confidence            111  112234699999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.88  E-value=7.2e-23  Score=128.08  Aligned_cols=107  Identities=20%  Similarity=0.298  Sum_probs=85.3

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++...                ..++..++..++.|++.|+.|+|+++++|+|++|+||+++.+   ..+
T Consensus        97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~---~~~  173 (314)
T cd05099          97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED---NVM  173 (314)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC---CcE
Confidence            6899999999999653                347888999999999999999999999999999999999543   459


Q ss_pred             EEeecccceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||.+.........   ....++..|++||.+.+ .++.++|+||||
T Consensus       174 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  223 (314)
T cd05099         174 KIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFG  223 (314)
T ss_pred             EEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHH
Confidence            99999988765332111   11123456999998874 588899999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.88  E-value=5.6e-24  Score=130.50  Aligned_cols=107  Identities=26%  Similarity=0.472  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||..|++.+.+.- +.++.+..+..+++.-+.|++|||...=+|||++.-||++..+   +..|++|||.+-.+++.-
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~---G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD---GIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc---chhhhhhccccchhhhhH
Confidence            899999999998864 5789999999999999999999999999999999999999543   347999999988876543


Q ss_pred             c-cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . .++..|||+|+|||++.. .|+..+|+||||
T Consensus       184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLG  216 (502)
T KOG0574|consen  184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLG  216 (502)
T ss_pred             HhhCccccCcccccHHHHHHhccchhhhHhhhc
Confidence            3 356789999999999985 499999999998

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.88  E-value=3.1e-23  Score=127.05  Aligned_cols=107  Identities=18%  Similarity=0.324  Sum_probs=82.8

Q ss_pred             CCCcCCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKG-----HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+++....     ...+..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+...
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~---~~~~kl~dfg~~~~~  150 (269)
T cd05042          74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA---DLSVKIGDYGLALEQ  150 (269)
T ss_pred             EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC---CCcEEEecccccccc
Confidence            68999999999986532     2467788999999999999999999999999999999954   445999999987653


Q ss_pred             CCccc---ccccccccccccccccc--------ccCCCccceeecC
Q 033837           76 RPREQ---FNELVGSLYYMALEVLK--------RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~---~~~~~~~~~~~~pe~~~--------~~~~~~~d~wslg  110 (110)
                      .....   .....+++.|+|||++.        ..++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05042         151 YPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG  196 (269)
T ss_pred             ccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence            22211   11223456699999863        1357789999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.88  E-value=1e-22  Score=123.75  Aligned_cols=108  Identities=22%  Similarity=0.426  Sum_probs=89.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..+++..+..++.+++.++.++|+++++|+|++|.||+++.+  ...++++|||.+......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH--KMVVKIGDFGISKILSSK  155 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEccCCCceecCCC
Confidence            6899999999999764  458999999999999999999999999999999999999533  345899999988776544


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......++..|++||.+.+ .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  188 (256)
T cd08220         156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALG  188 (256)
T ss_pred             ccccccccCCcccCchhccCCCCCcccchHHHH
Confidence            33333467788999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.88  E-value=5.9e-23  Score=126.59  Aligned_cols=107  Identities=27%  Similarity=0.558  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++++++.........+++.++..++.|++.++.|+|+++++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK---QGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC---CCcEEECccccceecCCCcc
Confidence            689998888877766678999999999999999999999999999999999999954   3459999999887664433 


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......++..|++||.+.+  .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG  188 (286)
T cd07847         156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIG  188 (286)
T ss_pred             cccCcccccccCCHHHHhCCCCcCchhhhHHHH
Confidence            2223456778999998864  378899999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.88  E-value=5.7e-23  Score=126.75  Aligned_cols=107  Identities=21%  Similarity=0.330  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+. ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~---~~~~~l~dfg~~~~~~~~~  162 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES---ENRVKIGDFGLTKVLPQDK  162 (284)
T ss_pred             EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC---CCeEEECCCcccccccCCC
Confidence            5899999999998754 56899999999999999999999999999999999999954   3458999999887654322


Q ss_pred             cc----ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..    ....++..|++||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  198 (284)
T cd05081         163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFG  198 (284)
T ss_pred             cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHH
Confidence            11    11122345899999874 488899999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.88  E-value=5.5e-23  Score=128.07  Aligned_cols=107  Identities=21%  Similarity=0.331  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++|+|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...+|++|||.+.......
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~---~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS---PNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC---CCceEEccccccccccCcc
Confidence            5789999999998764 46889999999999999999999999999999999999953   3458999999887654322


Q ss_pred             cc---ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   ....++..|++||.+.+ .++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG  198 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG  198 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHH
Confidence            11   12234567999998874 588899999987

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.88  E-value=5.1e-23  Score=125.83  Aligned_cols=107  Identities=26%  Similarity=0.450  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      |||+++++|.+++.+.+++++..+..++.|++.++.++|+.+++|+||+|.||+++   ....++++|||.+......  
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~  157 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLAWVGL  157 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhHhhhhccc
Confidence            68999999999998878899999999999999999999999999999999999995   3456999999987654211  


Q ss_pred             -----cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 -----EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 -----~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                           .......++..|++||.+.+ .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG  195 (265)
T cd06631         158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIG  195 (265)
T ss_pred             cccccccccccCCCccccChhhhcCCCCcchhhHHHHH
Confidence                 11123457788999999874 478899999987

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=3.6e-23  Score=126.85  Aligned_cols=107  Identities=19%  Similarity=0.328  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVA------KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++..      ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+..
T Consensus        85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~  161 (272)
T cd05075          85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE---NMNVCVADFGLSKK  161 (272)
T ss_pred             EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC---CCCEEECCCCcccc
Confidence            588999999988742      134889999999999999999999999999999999999954   34589999998876


Q ss_pred             cCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......   ....+++.|++||...+ .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG  201 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFG  201 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHH
Confidence            5432211   11234567999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=7.4e-23  Score=125.12  Aligned_cols=107  Identities=21%  Similarity=0.275  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.++.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~df~~~~~~~~~  157 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHLVKVADFGLSRLMTGD  157 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC---CCcEEeCCCccccccccc
Confidence            6899999999998653  45889999999999999999999999999999999999953   445999999988765433


Q ss_pred             cccc--cccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFN--ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~--~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....  ....+..|++||.+.+ .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  192 (263)
T cd05052         158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG  192 (263)
T ss_pred             eeeccCCCCCccccCCHHHhccCCCCchhHHHHHH
Confidence            2111  1223456999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.88  E-value=4.3e-23  Score=128.06  Aligned_cols=106  Identities=33%  Similarity=0.575  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++. .+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.+   ..++++|||.+........
T Consensus        98 ~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~~~  173 (292)
T cd06658          98 MEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVP  173 (292)
T ss_pred             EeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC---CCEEEccCcchhhcccccc
Confidence            68999999998774 4568899999999999999999999999999999999999543   4599999998765432221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|+|||.+.+ .++.++|+||+|
T Consensus       174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  205 (292)
T cd06658         174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLG  205 (292)
T ss_pred             cCceeecCccccCHHHHccCCCCchhhHHHHH
Confidence             223467888999999874 488899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.88  E-value=5.6e-23  Score=125.69  Aligned_cols=107  Identities=26%  Similarity=0.493  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~---~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06628          85 LEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKKLEANSL  161 (267)
T ss_pred             EEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC---CCCEEecccCCCcccccccc
Confidence            589999999999988888999999999999999999999999999999999999953   44599999998776542111


Q ss_pred             -------cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                             .....++..|++||.+.+ .++.++|+||+|
T Consensus       162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  199 (267)
T cd06628         162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLG  199 (267)
T ss_pred             cCCccccccccCCCcCccChhHhccCCCCchhhhHHHH
Confidence                   112346778999999874 478899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=6.2e-24  Score=128.87  Aligned_cols=100  Identities=28%  Similarity=0.465  Sum_probs=83.0

Q ss_pred             CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc--cccc
Q 033837            8 ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF--NELV   85 (110)
Q Consensus         8 ~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~   85 (110)
                      ||...+...+.++...++.+..||+.|+.|||+.+|+||||||-|+++   ..+..+|++|||+++........  ....
T Consensus       142 DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~~~hMTqEV  218 (449)
T KOG0664|consen  142 DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRDRLNMTHEV  218 (449)
T ss_pred             hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhhhhhhHHHH
Confidence            455555566778999999999999999999999999999999999999   55667999999999877544332  2345


Q ss_pred             ccccccccccccc--cCCCccceeecC
Q 033837           86 GSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        86 ~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      -|.+|++||++.+  .|+..+|+||.|
T Consensus       219 VTQYYRAPEiLMGaRhYs~AvDiWSVG  245 (449)
T KOG0664|consen  219 VTQYYRAPELLMGARRYTGAVDIWSVG  245 (449)
T ss_pred             HHHHhccHHHhhcchhhcCccceehhh
Confidence            6789999999985  499999999987

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.88  E-value=5.1e-23  Score=127.90  Aligned_cols=106  Identities=33%  Similarity=0.576  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+ ..+++.++..++.|++.|+.|||+.+++|+||+|+||+++.   ...++++|||.+........
T Consensus        96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~---~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC---CCCEEECccccchhcccccc
Confidence            689999999998854 46889999999999999999999999999999999999954   34599999998765433221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.+ .++.++|+||||
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~G  203 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  203 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCCCccchHHHHH
Confidence             123467788999999874 478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.88  E-value=9.8e-23  Score=124.77  Aligned_cols=107  Identities=29%  Similarity=0.445  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+.+...+.+++.....++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||++..+.... 
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~---~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          85 MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS---AGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC---CCCEEEccCCCccccccccc
Confidence            588999999999988778999999999999999999999999999999999999953   3459999999886543211 


Q ss_pred             ---ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         ......++..|+|||.+.+ .++.++|+||+|
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  196 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLG  196 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHH
Confidence               1122346778999999874 478899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.1e-22  Score=125.28  Aligned_cols=107  Identities=23%  Similarity=0.311  Sum_probs=87.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~---~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC---CCeEEECCCcccccccCcc
Confidence            5899999999999764 57999999999999999999999999999999999999953   3458999999887654332


Q ss_pred             cccc---cccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNE---LVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~---~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ....   ..++..|++||.+. ..++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  198 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYG  198 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHH
Confidence            2111   12245699999886 4588899999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.88  E-value=1e-22  Score=124.87  Aligned_cols=107  Identities=19%  Similarity=0.320  Sum_probs=83.1

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++.+.    ...+...+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+....
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~---~~~~~l~Dfg~~~~~~  150 (268)
T cd05086          74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS---DLTVKVGDYGIGPSRY  150 (268)
T ss_pred             EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC---CccEEecccccccccC
Confidence            6899999999998753    34667778899999999999999999999999999999943   4459999999875432


Q ss_pred             Ccc---ccccccccccccccccccc--------cCCCccceeecC
Q 033837           77 PRE---QFNELVGSLYYMALEVLKR--------NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~---~~~~~~~~~~~~~pe~~~~--------~~~~~~d~wslg  110 (110)
                      ...   ......++..|++||++..        .++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  195 (268)
T cd05086         151 KEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALG  195 (268)
T ss_pred             cchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHH
Confidence            211   1122356778999998741        246789999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.3e-22  Score=124.32  Aligned_cols=107  Identities=18%  Similarity=0.312  Sum_probs=85.4

Q ss_pred             CCCcCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++...      ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+..
T Consensus        86 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~  162 (273)
T cd05035          86 LPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE---DMTVCVADFGLSKK  162 (273)
T ss_pred             EeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC---CCeEEECCccceee
Confidence            5889999999988432      35889999999999999999999999999999999999953   44589999998876


Q ss_pred             cCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......   .....+..|++||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG  202 (273)
T cd05035         163 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG  202 (273)
T ss_pred             ccccccccccccccCCccccCHhhcccCCCCcccchHHHH
Confidence            5432211   11223457999999874 488999999987

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=6.2e-23  Score=127.89  Aligned_cols=107  Identities=21%  Similarity=0.271  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++....  .+++.++..++.+++.|+.|+|+++++|+|++|+||+++   ....++++|||.+......
T Consensus       118 ~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLARDIMND  194 (302)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcccccccCC
Confidence            68999999999987542  389999999999999999999999999999999999995   3446899999988765332


Q ss_pred             cc---cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   .....++..|++||.+.+ .++.++|+||+|
T Consensus       195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  230 (302)
T cd05055         195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG  230 (302)
T ss_pred             CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHH
Confidence            21   111234567999998874 588899999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=9.9e-23  Score=126.06  Aligned_cols=107  Identities=26%  Similarity=0.415  Sum_probs=89.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.++|+.+++|+||+|+||+++.   ...++++|||.+........
T Consensus        84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC---CCCEEEeeCccceecccccc
Confidence            689999999999988888999999999999999999999999999999999999954   34599999998866533221


Q ss_pred             --cccccccccccccccccc---cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                        .....++..|++||.+..   .++.++|+||+|
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG  195 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMG  195 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHH
Confidence              123457788999999863   367789999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.88  E-value=9.2e-23  Score=124.75  Aligned_cols=107  Identities=20%  Similarity=0.254  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++.+.  ..+++..+..++.|++.|+.++|+.+++|+|++|.||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~---~~~~~L~dfg~~~~~~~~  155 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---NLVCKVADFGLARLIEDN  155 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC---CCcEEeccCCceeecccc
Confidence            6899999999999753  45788999999999999999999999999999999999954   345899999988765432


Q ss_pred             ccc--cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ....++..|++||... +.++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG  190 (262)
T cd05071         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  190 (262)
T ss_pred             ccccccCCcccceecCHhHhccCCCCchhhHHHHH
Confidence            211  1223456799999886 4588999999987

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.88  E-value=4.7e-23  Score=130.79  Aligned_cols=103  Identities=25%  Similarity=0.448  Sum_probs=81.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++|+|.+.    ....+..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++..+.... 
T Consensus       151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS---AKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCEEEcccccceecccccc
Confidence            689999888653    34567888899999999999999999999999999999954   3459999999887654321 


Q ss_pred             ccccccccccccccccccc-----c-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-----N-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-----~-~~~~~d~wslg  110 (110)
                      ......|+..|++||.+..     . .+.++|+||||
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG  260 (353)
T PLN00034        224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG  260 (353)
T ss_pred             cccccccCccccCccccccccccCcCCCcchhHHHHH
Confidence            2234578899999998742     2 35689999997

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=8.6e-23  Score=126.70  Aligned_cols=107  Identities=20%  Similarity=0.315  Sum_probs=85.2

Q ss_pred             CCCcCCCCHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEee
Q 033837            1 MKLCEEGELVDRIVAKG------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAID   68 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d   68 (110)
                      |||+++++|.+++....            .+++..+..++.+++.|+.|||+++++|+|++|+||+++.   ...++++|
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~---~~~~kl~d  172 (295)
T cd05097          96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN---HYTIKIAD  172 (295)
T ss_pred             EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC---CCcEEecc
Confidence            68999999999885431            3678888999999999999999999999999999999953   34599999


Q ss_pred             cccceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           69 FGLSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        69 ~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ||.+.........   ....++..|+|||.+. +.++.++|+||||
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG  218 (295)
T cd05097         173 FGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFG  218 (295)
T ss_pred             cccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHH
Confidence            9988765332211   1123356799999886 4588999999987

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.88  E-value=1.2e-22  Score=123.42  Aligned_cols=107  Identities=21%  Similarity=0.387  Sum_probs=89.1

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++.++..++.+++.|+.|+|+++++|+|++|+||+++.+   ..++++|||.+......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~---~~~~l~df~~~~~~~~~  154 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY---DNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC---CCEEEcccccceeccCc
Confidence            6899999999998764  578999999999999999999999999999999999999643   45899999987765433


Q ss_pred             cc-ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .. .....+++.|++||... +.++.++|+||||
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  188 (256)
T cd08529         155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALG  188 (256)
T ss_pred             cchhhccccCccccCHHHhcCCCCCCccchHHHH
Confidence            22 22346778899999987 4578899999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.88  E-value=6.3e-23  Score=127.96  Aligned_cols=107  Identities=20%  Similarity=0.300  Sum_probs=85.2

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++...                ..++..++..++.|++.|+.|+|+++++|+|++|+||+++.   ...+
T Consensus       103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~---~~~~  179 (307)
T cd05098         103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE---DNVM  179 (307)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC---CCcE
Confidence            6899999999999753                24788899999999999999999999999999999999954   3458


Q ss_pred             EEeecccceecCCccccc---cccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFN---ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~---~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||.+..........   ...+++.|++||.+.+ .++.++|+||||
T Consensus       180 kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  229 (307)
T cd05098         180 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  229 (307)
T ss_pred             EECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHH
Confidence            999999876553221111   1123457999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.88  E-value=9.9e-23  Score=124.26  Aligned_cols=107  Identities=20%  Similarity=0.291  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++.++..++.|++.|+.|+|+.+++|+|++|.||+++.   ...++++|||.+.......
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~---~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD---QGCVKVSDFGLSRYVLDDE  154 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC---CCCEEECCCccceecCCCc
Confidence            6899999999998764 47899999999999999999999999999999999999954   3459999999876653322


Q ss_pred             ccc--ccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ...++..|++||... ..++.++|+||||
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG  188 (256)
T cd05113         155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFG  188 (256)
T ss_pred             eeecCCCccChhhCCHHHHhcCcccchhHHHHHH
Confidence            111  123345699999987 4588899999987

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.88  E-value=1.3e-22  Score=123.83  Aligned_cols=107  Identities=21%  Similarity=0.306  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++.+.  ..++...+..++.+++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~~~~~  156 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE---SLMCKIADFGLARVIEDN  156 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC---CCcEEECCCccceecCCC
Confidence            6899999999998653  56888999999999999999999999999999999999954   445899999988765432


Q ss_pred             ccc--cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ....++..|++||.+. +.++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  191 (261)
T cd05072         157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG  191 (261)
T ss_pred             ceeccCCCccceecCCHHHhccCCCChhhhhhhhH
Confidence            211  1223455799999887 4578899999997

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=7.3e-23  Score=125.21  Aligned_cols=107  Identities=28%  Similarity=0.445  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        85 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          85 VEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS---AGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEECccccccccccccc
Confidence            588999999999987778999999999999999999999999999999999999954   3458999999887653211 


Q ss_pred             ---ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         ......++..|++||.+.+ .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  196 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVA  196 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHH
Confidence               1123457788999999875 478899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=1e-22  Score=125.61  Aligned_cols=107  Identities=20%  Similarity=0.295  Sum_probs=85.8

Q ss_pred             CCCcCCCCHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEE
Q 033837            1 MKLCEEGELVDRIVAKG---------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK   65 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~   65 (110)
                      |||+++++|.+++....               .+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~---~~~~k  162 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ---GLVVK  162 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC---CCCEE
Confidence            58999999999986542               4788999999999999999999999999999999999954   34599


Q ss_pred             EeecccceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           66 AIDFGLSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        66 l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ++|||.+.........   ....+++.|++||.+.+ .++.++|+||||
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG  211 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence            9999988654332211   11234567999998874 588999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=9.9e-23  Score=123.77  Aligned_cols=107  Identities=21%  Similarity=0.277  Sum_probs=85.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        72 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~~  148 (252)
T cd05084          72 MELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE---KNVLKISDFGMSREEEDGV  148 (252)
T ss_pred             EeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC---CCcEEECccccCccccccc
Confidence            6899999999998654 56899999999999999999999999999999999999954   3459999999876543221


Q ss_pred             ccc--c-cccccccccccccc-ccCCCccceeecC
Q 033837           80 QFN--E-LVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~-~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  . ...+..|++||.+. +.++.++|+||||
T Consensus       149 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  183 (252)
T cd05084         149 YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFG  183 (252)
T ss_pred             ccccCCCCCCceeecCchhhcCCCCChHHHHHHHH
Confidence            110  1 11234599999987 4588899999987

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.88  E-value=9.3e-23  Score=124.43  Aligned_cols=107  Identities=22%  Similarity=0.341  Sum_probs=84.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+|+|.+++.+. .......+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~---~~~~kl~dfg~~~~~~~~~  152 (262)
T cd05058          76 LPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE---SFTVKVADFGLARDIYDKE  152 (262)
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC---CCcEEECCccccccccCCc
Confidence            5889999999998764 45677888899999999999999999999999999999954   4458999999886543211


Q ss_pred             c-----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .     .....++..|++||.+. ..++.++|+||||
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  189 (262)
T cd05058         153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFG  189 (262)
T ss_pred             ceeecccccCcCCccccChhHhccCccchHHHHHHHH
Confidence            1     11223456799999886 4588899999987

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.88  E-value=5.5e-23  Score=128.34  Aligned_cols=106  Identities=23%  Similarity=0.424  Sum_probs=85.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ ++.+++... ..+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||.+.......
T Consensus        83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~  158 (309)
T cd07872          83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE---RGELKLADFGLARAKSVPT  158 (309)
T ss_pred             EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECccccceecCCCc
Confidence            688875 888887654 45889999999999999999999999999999999999954   3459999999886543322


Q ss_pred             c-cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . .....+++.|+|||.+.+  .++.++|+||+|
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  192 (309)
T cd07872         159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVG  192 (309)
T ss_pred             cccccccccccccCCHHHhCCCCCCcHHHHHHHH
Confidence            1 223456888999998863  478899999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.88  E-value=1.1e-22  Score=123.77  Aligned_cols=107  Identities=23%  Similarity=0.360  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+.+.+..  .+++..+..++.|++.|+.++|+++++|+|++|+||+++.+   ..++++|||.+..+...
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~---~~~kl~dfg~~~~~~~~  150 (257)
T cd05040          74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD---DKVKIGDFGLMRALPQN  150 (257)
T ss_pred             EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC---CEEEecccccccccccc
Confidence            58899999999997653  68999999999999999999999999999999999999644   46999999988766432


Q ss_pred             ccc----ccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQF----NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~----~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...    ....++..|++||.+.. .++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG  187 (257)
T cd05040         151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG  187 (257)
T ss_pred             ccceecccCCCCCceecCHHHhcccCcCchhhhHHHH
Confidence            211    11345667999998874 588899999987

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.88  E-value=2.2e-22  Score=124.06  Aligned_cols=107  Identities=29%  Similarity=0.489  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++++++...+.+ ..++++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~~~~~~~  157 (282)
T cd06643          81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTI  157 (282)
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc---CCCEEEccccccccccccc
Confidence            589999999988765 467999999999999999999999999999999999999954   3459999999876543321


Q ss_pred             -cccccccccccccccccc------ccCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                       ......+++.|++||.+.      ..++.++|+||+|
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  195 (282)
T cd06643         158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  195 (282)
T ss_pred             cccccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence             122346788899999873      1267789999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.4e-22  Score=123.52  Aligned_cols=107  Identities=27%  Similarity=0.477  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++.++..++.|++.|+.|||+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~~~~~~  155 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE---DGDVKLADFGVSAQLTATI  155 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC---CCCEEECccccchhhhhhh
Confidence            6899999999988766 78999999999999999999999999999999999999954   3458999999876554322


Q ss_pred             -cccccccccccccccccc-c---cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK-R---NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~-~---~~~~~~d~wslg  110 (110)
                       ......++..|++||.+. .   .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG  191 (262)
T cd06613         156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALG  191 (262)
T ss_pred             hccccccCCccccCchhhcccccCCcCchhhhHHHH
Confidence             122345677899999886 3   477899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.88  E-value=1.2e-22  Score=125.37  Aligned_cols=107  Identities=18%  Similarity=0.305  Sum_probs=85.4

Q ss_pred             CCCcCCCCHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCce
Q 033837            1 MKLCEEGELVDRIVAK-----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS   63 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~   63 (110)
                      |||+++++|.+++...                 ..+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~---~~~  162 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE---QLH  162 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC---CCc
Confidence            6899999999988532                 24778889999999999999999999999999999999954   345


Q ss_pred             EEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           64 LKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        64 ~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ++++|||++........   .....++..|++||.+. ..++.++|+||||
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  213 (283)
T cd05090         163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFG  213 (283)
T ss_pred             EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHH
Confidence            89999998876533221   11223456699999987 4588999999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.88  E-value=1.6e-22  Score=122.72  Aligned_cols=107  Identities=21%  Similarity=0.246  Sum_probs=85.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+.+.++..++.+++.++.++|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        71 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~~~~~~~  147 (250)
T cd05085          71 MELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE---NNVLKISDFGMSRQEDDGI  147 (250)
T ss_pred             EECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC---CCeEEECCCccceeccccc
Confidence            6899999999988654 56889999999999999999999999999999999999954   4458999999886543222


Q ss_pred             ccc--ccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ...++..|++||.+. +.++.++|+||||
T Consensus       148 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  181 (250)
T cd05085         148 YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYG  181 (250)
T ss_pred             cccCCCCCCcccccCHHHhccCCCCchhHHHHHH
Confidence            111  112345699999987 4578899999987

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.88  E-value=1.9e-22  Score=124.43  Aligned_cols=107  Identities=27%  Similarity=0.496  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+.+..    ...+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+....
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~~~~  175 (286)
T cd06638          99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVSAQLT  175 (286)
T ss_pred             EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC---CCCEEEccCCceeecc
Confidence            689999999987742    356889999999999999999999999999999999999954   3449999999887654


Q ss_pred             Ccc-cccccccccccccccccc------ccCCCccceeecC
Q 033837           77 PRE-QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~-~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      ... ......+++.|+|||.+.      ..++.++|+||+|
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  216 (286)
T cd06638         176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLG  216 (286)
T ss_pred             cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHH
Confidence            322 122346788899999874      2378899999987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.88  E-value=1.5e-22  Score=124.07  Aligned_cols=107  Identities=22%  Similarity=0.299  Sum_probs=83.2

Q ss_pred             CCCcCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAK-----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+++...     ..+.+..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+...
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~---~~~~kL~dfg~~~~~  150 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA---DLTVKIGDYGLSHNK  150 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC---CCcEEECCccccccc
Confidence            6899999999998642     24566788889999999999999999999999999999954   445999999987654


Q ss_pred             CCccc---cccccccccccccccccc--------cCCCccceeecC
Q 033837           76 RPREQ---FNELVGSLYYMALEVLKR--------NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~---~~~~~~~~~~~~pe~~~~--------~~~~~~d~wslg  110 (110)
                      .....   .....++..|+|||++.+        .++.++|+||||
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05087         151 YKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG  196 (269)
T ss_pred             cCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence            32211   112345677999998752        246799999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.88  E-value=9.9e-23  Score=125.64  Aligned_cols=107  Identities=18%  Similarity=0.355  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      +||+.+++|.+++...                ..+++..+..++.|++.|+.|+|+++++|+|++|.||++..   ...+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~---~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD---KLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC---CCce
Confidence            4788889999988522                34788889999999999999999999999999999999953   3458


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      |++|||++........   .....+++.|+|||.+. +.++.++|+||||
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  213 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYG  213 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHH
Confidence            9999998776533221   11233456899999886 5588899999987

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.88  E-value=1.3e-22  Score=125.52  Aligned_cols=107  Identities=21%  Similarity=0.316  Sum_probs=84.2

Q ss_pred             CCCcCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK----------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      |||+++|+|.+++.+.          .......+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~---~~~~~L~Dfg  164 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFG  164 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC---CCcEEECcCC
Confidence            6899999999999642          22456778899999999999999999999999999999954   4458999999


Q ss_pred             cceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           71 LSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .++........   ....++..|++||.+.+ .++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG  208 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG  208 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHH
Confidence            88755332211   11233566999999874 588899999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.7e-22  Score=124.16  Aligned_cols=107  Identities=21%  Similarity=0.306  Sum_probs=85.6

Q ss_pred             CCCcCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK----------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      |||+++|+|.+++...          ..+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~---~~~~kl~dfg  164 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE---DLTVKIGDFG  164 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC---CCCEEECCcc
Confidence            6899999999998642          23677889999999999999999999999999999999954   3458999999


Q ss_pred             cceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           71 LSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .+........   .....++..|++||.+. +.++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  208 (277)
T cd05032         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFG  208 (277)
T ss_pred             cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHH
Confidence            8765533221   11234566799999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.88  E-value=1.3e-22  Score=124.66  Aligned_cols=107  Identities=19%  Similarity=0.271  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAKG---------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      |||+++|+|.+++....         .+++..+..++.|++.++.|||+++++|+|++|+||+++.+   ..++++|||.
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~---~~~~l~~~~~  163 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ---REVKVSLLSL  163 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC---CcEEEccccc
Confidence            68999999999997654         68999999999999999999999999999999999999653   3489999998


Q ss_pred             ceecCCcc--cccccccccccccccccc-ccCCCccceeecC
Q 033837           72 SVFFRPRE--QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~--~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +.......  ......++..|++||.+. ..++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  205 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFG  205 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHH
Confidence            76543221  112234566799999886 4478899999987

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.88  E-value=1.9e-22  Score=123.06  Aligned_cols=107  Identities=19%  Similarity=0.243  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..+++.++..++.+++.|+.|+|+.+++|+|++|.||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~---~~~~~l~dfg~~~~~~~~  155 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD---GLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC---CceEEeCCceeeeeccCc
Confidence            6899999999998753  45899999999999999999999999999999999999954   446899999988765432


Q ss_pred             ccc--cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ....++..|+|||... ..++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  190 (260)
T cd05070         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  190 (260)
T ss_pred             ccccccCCCCCccccChHHHhcCCCcchhhhHHHH
Confidence            211  1123345699999886 4588899999987

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=2e-22  Score=123.38  Aligned_cols=107  Identities=22%  Similarity=0.347  Sum_probs=87.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++.++..++.|++.|+.+||+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~---~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC---CCCEEECccchhhcccccc
Confidence            6899999999998654 57899999999999999999999999999999999999954   3458999999887764211


Q ss_pred             -cccc--ccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNE--LVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~--~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ....  ..+++.|++||.+.+ .++.++|+||||
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG  195 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFG  195 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHH
Confidence             1111  223456999999874 588899999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.88  E-value=1.4e-22  Score=128.59  Aligned_cols=104  Identities=27%  Similarity=0.446  Sum_probs=85.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. +++.+.+...  +++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus       100 ~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~---~~~~kL~Dfg~~~~~~~~~~  173 (353)
T cd07850         100 MELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  173 (353)
T ss_pred             EeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC---CCCEEEccCccceeCCCCCC
Confidence            57776 4888877544  889999999999999999999999999999999999954   34599999999876544333


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.+ .++.++|+||+|
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  204 (353)
T cd07850         174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  204 (353)
T ss_pred             CCCCcccccccCHHHHhCCCCCCchhhHhHH
Confidence            333467788999999874 488999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.88  E-value=1.6e-22  Score=123.64  Aligned_cols=108  Identities=23%  Similarity=0.454  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+.+++++..+..++.|++.|+.++|+++++|+||+|.||+++..  ...++++|||.+........
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~--~~~~~l~dfg~~~~~~~~~~  159 (268)
T cd06630          82 VEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST--GQRLRIADFGAAARLAAKGT  159 (268)
T ss_pred             EeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEcccccccccccccc
Confidence            5889999999999887889999999999999999999999999999999999999532  23589999998876543211


Q ss_pred             -----cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                           .....++..|++||.+.+ .++.++|+||+|
T Consensus       160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG  195 (268)
T cd06630         160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVG  195 (268)
T ss_pred             cCCccccccccccceeCHhHhccCCCCcccchHHHH
Confidence                 112356778999999874 478899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.3e-22  Score=126.94  Aligned_cols=107  Identities=29%  Similarity=0.414  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+.+++|.+++...  ..+++..+..++.|++.++.|+|+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE---SGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC---CCCEEEeecchhhccccc
Confidence            6899999999998754  56999999999999999999999999999999999999954   345899999987654211


Q ss_pred             cc------------------------------cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ------------------------------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~------------------------------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..                              .....|+..|++||.+.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG  219 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLG  219 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHH
Confidence            10                              012356778999999874 478899999987

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.88  E-value=2.4e-22  Score=125.31  Aligned_cols=107  Identities=29%  Similarity=0.427  Sum_probs=87.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|+|+++++|+|++|.||+++.   ...++++|||.+....... 
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~---~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS---MGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC---CCCEEEeeCCCccccCcCcc
Confidence            689999999999988888999999999999999999999999999999999999953   4459999999875311000 


Q ss_pred             ---------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                     ......++..|++||.+.. .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  203 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMG  203 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHH
Confidence                           0011245678999998864 588999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.8e-22  Score=122.40  Aligned_cols=107  Identities=17%  Similarity=0.211  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++....  .++...+..++.+++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~~  156 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE---NNICKVADFGLARVIKED  156 (261)
T ss_pred             eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC---CCCEEECCcceEEEccCC
Confidence            68999999999997643  6899999999999999999999999999999999999954   345999999988766432


Q ss_pred             cccc--cccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFN--ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~--~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....  ....+..|++||...+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  191 (261)
T cd05068         157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFG  191 (261)
T ss_pred             cccccCCCcCceeccCccccccCCCCchhhHHHHH
Confidence            2111  1112346999998874 588899999987

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=2e-22  Score=130.77  Aligned_cols=102  Identities=29%  Similarity=0.470  Sum_probs=83.3

Q ss_pred             CCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc---c
Q 033837            5 EEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE---Q   80 (110)
Q Consensus         5 ~~g~l~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~---~   80 (110)
                      ..-||.+.+.++.. .+...++.+..|++.++.+.|..||+|.||||.|+++.    ++.+|++|||.+..+....   .
T Consensus       442 Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  442 GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcccccee
Confidence            34699999987754 44468999999999999999999999999999999884    3459999999987764432   2


Q ss_pred             ccccccccccccccccc----c--------cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK----R--------NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~----~--------~~~~~~d~wslg  110 (110)
                      ....+||+.||+||++.    +        ..++++||||||
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG  559 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG  559 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence            34579999999999984    1        156799999998

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.87  E-value=1.6e-22  Score=122.94  Aligned_cols=107  Identities=26%  Similarity=0.422  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~---~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT---NGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEccCccceecccccc
Confidence            589999999999988778999999999999999999999999999999999999954   34599999998776544332


Q ss_pred             ccccccccccccccccc-cc-CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RN-YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~-~~~~~d~wslg  110 (110)
                      .....++..|++||.+. .. ++.++|+||+|
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG  189 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLG  189 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHH
Confidence            33456778899999886 34 78899999987

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.87  E-value=9.8e-23  Score=132.94  Aligned_cols=102  Identities=29%  Similarity=0.503  Sum_probs=89.6

Q ss_pred             CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccc
Q 033837            5 EEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL   84 (110)
Q Consensus         5 ~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~   84 (110)
                      +|.||++++.-++.+.|..++.++.||+.|+++||+++|+|||||-+|++++   .++.+|++|||.+....++ .....
T Consensus       653 ~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd---~~g~~klidfgsaa~~ksg-pfd~f  728 (772)
T KOG1152|consen  653 EGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD---SNGFVKLIDFGSAAYTKSG-PFDVF  728 (772)
T ss_pred             CCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEe---cCCeEEEeeccchhhhcCC-Cccee
Confidence            4679999999899999999999999999999999999999999999999994   4556999999987655443 45678


Q ss_pred             ccccccccccccccc-C-CCccceeecC
Q 033837           85 VGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        85 ~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      .||..|.|||++.+. | +..-|+|++|
T Consensus       729 ~gtv~~aapevl~g~~y~gk~qdiwalg  756 (772)
T KOG1152|consen  729 VGTVDYAAPEVLGGEKYLGKPQDIWALG  756 (772)
T ss_pred             eeeccccchhhhCCCccCCCcchhhhhh
Confidence            999999999999864 5 7889999997

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.5e-22  Score=123.17  Aligned_cols=105  Identities=22%  Similarity=0.345  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++....  .+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~---~~~~~l~d~g~~~~~~~~  155 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE---DLVAKVSDFGLAKEASQG  155 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC---CCCEEEcccccccccccc
Confidence            68999999999997664  6999999999999999999999999999999999999954   345899999988765322


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  ....+..|++||.+. +.++.++|+||||
T Consensus       156 ~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG  186 (256)
T cd05039         156 QD--SGKLPVKWTAPEALREKKFSTKSDVWSFG  186 (256)
T ss_pred             cc--cCCCcccccCchhhcCCcCCcHHHHHHHH
Confidence            11  222345699999887 4578899999987

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.87  E-value=2.8e-22  Score=122.85  Aligned_cols=107  Identities=24%  Similarity=0.407  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... +.+++.++..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~---~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC---CCcEEECCCccccccccCc
Confidence            6899999999998754 67899999999999999999999999999999999999953   4459999999876543321


Q ss_pred             cc---ccccc---ccccccccccc-ccCCCccceeecC
Q 033837           80 QF---NELVG---SLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~---~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..   ....+   +..|++||.+. +.++.++|+||+|
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG  198 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYG  198 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhH
Confidence            11   11111   24699999987 4588899999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.87  E-value=1.8e-22  Score=124.43  Aligned_cols=102  Identities=25%  Similarity=0.377  Sum_probs=84.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++++++..+    ..+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.   ...++++|||++....... 
T Consensus        78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~---~~~~~l~dfg~~~~~~~~~-  149 (279)
T cd06619          78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT---RGQVKLCDFGVSTQLVNSI-  149 (279)
T ss_pred             EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC---CCCEEEeeCCcceeccccc-
Confidence            689999988654    35788899999999999999999999999999999999954   4459999999887653322 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....++..|++||.+.+ .++.++|+||||
T Consensus       150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  180 (279)
T cd06619         150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLG  180 (279)
T ss_pred             ccCCCCChhhcCceeecCCCCCCcchHHHHH
Confidence            233467889999999874 488999999987

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=2.2e-22  Score=122.25  Aligned_cols=107  Identities=23%  Similarity=0.335  Sum_probs=87.6

Q ss_pred             CCCcCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.....  +++.++..++.|++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE---NLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc---CCeEEEcccCCceecccc
Confidence            689999999999976543  999999999999999999999999999999999999954   346999999988766443


Q ss_pred             ccccc--ccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNE--LVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~--~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....  ..+++.|++||.+.+ .++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG  191 (258)
T smart00219      157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFG  191 (258)
T ss_pred             cccccccCCCcccccChHHhccCCCCcchhHHHHH
Confidence            22111  224567999998864 488999999987

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.87  E-value=2.4e-22  Score=122.76  Aligned_cols=107  Identities=27%  Similarity=0.504  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++..    ...+++.++..++.+++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+....
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~---~~~~~l~d~~~~~~~~  157 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC---CCcEEEeccceeeecc
Confidence            689999999998853    345889999999999999999999999999999999999954   3458999999877654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....+++.|.+||.+.+ .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  193 (267)
T cd08224         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG  193 (267)
T ss_pred             CCCcccceecCCccccCHHHhccCCCCchhcHHHHH
Confidence            3221 223457788999998874 488899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.87  E-value=2.6e-22  Score=123.08  Aligned_cols=107  Identities=19%  Similarity=0.267  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+. ..+++.++..++.+++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~~~~~~~  161 (270)
T cd05056          85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS---PDCVKLGDFGLSRYLEDES  161 (270)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---CCCeEEccCceeeeccccc
Confidence            6899999999999764 45899999999999999999999999999999999999954   3459999999887654332


Q ss_pred             ccc--cccccccccccccccc-cCCCccceeecC
Q 033837           80 QFN--ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~--~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...  ...++..|++||.+.. .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  195 (270)
T cd05056         162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFG  195 (270)
T ss_pred             ceecCCCCccccccChhhhccCCCCchhhhHHHH
Confidence            111  1223456999998864 488899999987

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.87  E-value=2.7e-22  Score=126.46  Aligned_cols=107  Identities=21%  Similarity=0.304  Sum_probs=84.8

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.+.                ..++..++..++.|++.|+.|||+++++|+|++|+||+++.+   ..+
T Consensus        97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~---~~~  173 (334)
T cd05100          97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED---NVM  173 (334)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC---CcE
Confidence            5899999999998653                236778889999999999999999999999999999999543   459


Q ss_pred             EEeecccceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||.++........   ....++..|++||.+.+ .++.++|+||||
T Consensus       174 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  223 (334)
T cd05100         174 KIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  223 (334)
T ss_pred             EECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHH
Confidence            99999988765432211   11223456999999874 488899999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.87  E-value=2.6e-22  Score=127.01  Aligned_cols=89  Identities=22%  Similarity=0.290  Sum_probs=70.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc---cccccccccccccc
Q 033837           19 YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALEV   95 (110)
Q Consensus        19 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~   95 (110)
                      ++..++..++.|++.|+.|+|+++++|+||+|.||+++.   ...++++|||.+.........   ....++..|++||.
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  252 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  252 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC---CCcEEEEecccccccccCcchhhcCCCCCCcceECcHH
Confidence            567788899999999999999999999999999999954   345999999988664322111   11233456999998


Q ss_pred             ccc-cCCCccceeecC
Q 033837           96 LKR-NYGPEVDVWSML  110 (110)
Q Consensus        96 ~~~-~~~~~~d~wslg  110 (110)
                      +.+ .++.++|+||||
T Consensus       253 ~~~~~~~~~~Di~slG  268 (343)
T cd05103         253 IFDRVYTIQSDVWSFG  268 (343)
T ss_pred             hcCCCCCchhhHHHHH
Confidence            874 588899999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.87  E-value=2.2e-22  Score=122.86  Aligned_cols=107  Identities=20%  Similarity=0.252  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..++...+..++.|++.|+.|+|+.+++|+|++|+||+++   +...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCccceEccCC
Confidence            6899999999999754  3478899999999999999999999999999999999994   4456999999988765332


Q ss_pred             ccc--cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ....++..|++||... ..++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG  190 (260)
T cd05069         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  190 (260)
T ss_pred             cccccCCCccchhhCCHHHhccCCcChHHHHHHHH
Confidence            211  1223456799999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.1e-22  Score=124.03  Aligned_cols=107  Identities=29%  Similarity=0.497  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+. ..+++..+..++.|++.++.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~---~~~~~l~d~g~~~~~~~~~  157 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL---DGDVKLADFGVSAKNKSTL  157 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC---CCCEEEccCccchhhcccc
Confidence            6899999999998764 57999999999999999999999999999999999999953   4459999999876543322


Q ss_pred             c-ccccccccccccccccc------ccCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      . .....+++.|++||.+.      ..++.++|+||+|
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG  195 (280)
T cd06611         158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG  195 (280)
T ss_pred             cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHH
Confidence            1 22345788899999874      1256789999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.87  E-value=1.8e-22  Score=125.23  Aligned_cols=106  Identities=28%  Similarity=0.418  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++.... .+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~---~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC---CCCEEEccceeeeeccCCC
Confidence            6889 889999997765 7999999999999999999999999999999999999964   3459999999887654332


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|++||.+.+  .++.++|+||||
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  190 (298)
T cd07841         157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVG  190 (298)
T ss_pred             ccccccccceeeeCHHHHhCCCCCCcHHHHHHHH
Confidence             2222345678999998853  378899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.87  E-value=1.9e-22  Score=122.97  Aligned_cols=107  Identities=20%  Similarity=0.294  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..+...++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~---~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE---DLVCKVADFGLARLIKED  157 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC---CceEEEccccchhhcCCc
Confidence            6899999999999753  46889999999999999999999999999999999999954   345999999988665332


Q ss_pred             ccc-cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF-NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~-~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ... ....++..|++||... ..++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG  191 (261)
T cd05148         158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFG  191 (261)
T ss_pred             cccccCCCCceEecCHHHHccCCCCchhhHHHHH
Confidence            211 1223455699999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.87  E-value=5.3e-22  Score=122.25  Aligned_cols=106  Identities=30%  Similarity=0.585  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+ +|++.+.+....  .+++.++..++.|++.++.|||+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~---~~~~~l~d~~~~~~~~~~  152 (283)
T cd07830          77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG---PEVVKIADFGLAREIRSR  152 (283)
T ss_pred             EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC---CCCEEEeecccceeccCC
Confidence            6888 779999887654  7899999999999999999999999999999999999954   456999999988766544


Q ss_pred             cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .......++..|++||.+.+  .++.++|+||||
T Consensus       153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G  186 (283)
T cd07830         153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALG  186 (283)
T ss_pred             CCcCCCCCcccccCceeeecCcCcCCccchhhHH
Confidence            33344567788999998853  378899999987

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.87  E-value=2.5e-22  Score=123.78  Aligned_cols=107  Identities=27%  Similarity=0.526  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++...  ..+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        98 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~---~~~~~l~dfg~~~~~~~~  174 (282)
T cd06636          98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE---NAEVKLVDFGVSAQLDRT  174 (282)
T ss_pred             EEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCcchhhhhcc
Confidence            6899999999988653  45888889999999999999999999999999999999954   345999999987654321


Q ss_pred             -ccccccccccccccccccc------ccCCCccceeecC
Q 033837           79 -EQFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 -~~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                       .......+++.|+|||.+.      ..++.++|+||||
T Consensus       175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG  213 (282)
T cd06636         175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG  213 (282)
T ss_pred             ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence             1123346788899999874      2377789999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.87  E-value=4.3e-23  Score=126.16  Aligned_cols=107  Identities=30%  Similarity=0.437  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  ..+++.++..++.|++.|+.|||+++++|++|+++||+++.   ...+|++|||.+......
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~---~~~~Kl~~f~~~~~~~~~  156 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS---NGQVKLSDFGLSRPISEK  156 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET---TTEEEEESTTTGEETTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence            5899999999999876  77999999999999999999999999999999999999964   446999999988776222


Q ss_pred             cc---cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   .........|++||.+.. .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG  192 (259)
T PF07714_consen  157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFG  192 (259)
T ss_dssp             SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc
Confidence            11   112344567999999974 488899999997

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.9e-22  Score=123.89  Aligned_cols=106  Identities=27%  Similarity=0.517  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      +||+++++|.+++... ++++..+..++.|++.++.++|+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~~~~~~~  153 (274)
T cd06609          78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE---EGDVKLADFGVSGQLTSTMS  153 (274)
T ss_pred             EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEcccccceeeccccc
Confidence            5889999999988755 8899999999999999999999999999999999999954   4459999999887765432 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|++||.+.+ .++.++|+||||
T Consensus       154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG  185 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLG  185 (274)
T ss_pred             ccccccCCccccChhhhccCCCCchhhHHHHH
Confidence            2233467778999999874 488999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.87  E-value=1.1e-22  Score=125.40  Aligned_cols=106  Identities=27%  Similarity=0.520  Sum_probs=85.7

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++ +++.+++.. .+.+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          78 FEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK---NGELKLADFGLARAFGIPV  153 (284)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC---CCcEEECccchhhccCCCC
Confidence            57887 488887765 567999999999999999999999999999999999999954   3459999999887553321


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  187 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  187 (284)
T ss_pred             CCcCCCccccCCcChHHHhCCcccCcHHHHHHHH
Confidence             2223456788999998864  368899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.87  E-value=1.6e-22  Score=123.73  Aligned_cols=107  Identities=29%  Similarity=0.512  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++..    ...+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~---~~~~~l~d~g~~~~~~  157 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC---CCCEEECccccceecc
Confidence            588999999988752    345889999999999999999999999999999999999954   3459999999887654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....+++.|++||.+.+ .++.++|+||+|
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG  193 (267)
T cd08228         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG  193 (267)
T ss_pred             chhHHHhcCCCCccccChhhhccCCCCchhhHHHHH
Confidence            3222 223457788999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.87  E-value=2e-22  Score=123.27  Aligned_cols=107  Identities=27%  Similarity=0.502  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++..    ...+++.++..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~~~  157 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCCEEECcchhhhccc
Confidence            588999999998863    356899999999999999999999999999999999999954   3459999999876654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....++..|++||.+.+ .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG  193 (267)
T cd08229         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG  193 (267)
T ss_pred             cCCcccccccCCcCccCHHHhcCCCccchhhHHHHH
Confidence            3222 223467788999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.87  E-value=3.2e-22  Score=124.20  Aligned_cols=107  Identities=18%  Similarity=0.314  Sum_probs=84.6

Q ss_pred             CCCcCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeec
Q 033837            1 MKLCEEGELVDRIVAKG-----------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF   69 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~   69 (110)
                      |||+++|+|.+++....           .+++.++..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++||
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~---~~~~~l~df  174 (296)
T cd05095          98 TEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK---NYTIKIADF  174 (296)
T ss_pred             EEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC---CCCEEeccC
Confidence            68999999999986532           3667789999999999999999999999999999999954   345899999


Q ss_pred             ccceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           70 GLSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        70 g~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      |.+..+......   .....++.|++||... +.++.++|+||||
T Consensus       175 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG  219 (296)
T cd05095         175 GMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG  219 (296)
T ss_pred             cccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHH
Confidence            988765332211   1122345689999776 5588999999997

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.87  E-value=4.7e-22  Score=123.20  Aligned_cols=107  Identities=24%  Similarity=0.447  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++++++...+.+ ...+++..+..++.|++.++.++|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~kl~dfg~~~~~~~~~  164 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL---DGDIKLADFGVSAKNVKTL  164 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC---CCCEEEccCccceeccccc
Confidence            689999999887754 467899999999999999999999999999999999999953   3459999999876543221


Q ss_pred             -cccccccccccccccccc------ccCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                       ......+++.|++||.+.      ..++.++|+||||
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  202 (292)
T cd06644         165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG  202 (292)
T ss_pred             cccceecCCccccCceeeccccccCCCCCchhhhHhHH
Confidence             122345778899999874      2267789999997

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.87  E-value=1.7e-22  Score=125.73  Aligned_cols=106  Identities=32%  Similarity=0.553  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.. ..+++..+..++.|++.|+.++|+++++|+|++|.||+++.   ...++++|||.+........
T Consensus        97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~---~~~~kL~dfg~~~~~~~~~~  172 (297)
T cd06659          97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVP  172 (297)
T ss_pred             EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc---CCcEEEeechhHhhcccccc
Confidence            589999999887644 56899999999999999999999999999999999999954   34599999998765433221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+ .++.++|+||+|
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  204 (297)
T cd06659         173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLG  204 (297)
T ss_pred             cccceecCccccCHHHHccCCCCchhhHHHHH
Confidence             223467888999999874 588899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=2.1e-22  Score=132.87  Aligned_cols=105  Identities=20%  Similarity=0.282  Sum_probs=81.5

Q ss_pred             CCcCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            2 KLCEEGELVDRIVAK-----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         2 e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |++. +++.+++...     ......++..++.|++.||.|||+++|+||||||+||+++.   ...++|+|||++..+.
T Consensus       243 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~---~~~vkL~DFGla~~~~  318 (501)
T PHA03210        243 QKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIVLGDFGTAMPFE  318 (501)
T ss_pred             eccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEEEeCCCceecC
Confidence            4443 4677766432     22345678889999999999999999999999999999954   3459999999987764


Q ss_pred             Cccc--cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ--FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....  .....|++.|++||++.+ .++.++|+||||
T Consensus       319 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  355 (501)
T PHA03210        319 KEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCG  355 (501)
T ss_pred             cccccccccccCCcCCCCchhhcCCCCCcHHHHHHHH
Confidence            4322  223578999999999974 489999999997

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.87  E-value=2.4e-22  Score=124.94  Aligned_cols=106  Identities=33%  Similarity=0.574  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+ ..+++.++..++.|++.++.++|+.+++|+||+|+||+++.   ...++++|||.+........
T Consensus        95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~---~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEECcCccceEccCCcc
Confidence            689999999998854 46788999999999999999999999999999999999954   34599999998766533221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.+ .++.++|+||+|
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  202 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  202 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCCCcHHHHHHHH
Confidence             223467788999999874 478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.87  E-value=5e-22  Score=121.31  Aligned_cols=107  Identities=21%  Similarity=0.289  Sum_probs=85.8

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..++...+..++.|++.|+.++|+.+++|+||+|+|++++   ....++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeeccCC
Confidence            6899999999999753  4578889999999999999999999999999999999994   3456999999988665432


Q ss_pred             ccc--ccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...  ....++..|++||.+.. .++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  190 (260)
T cd05073         156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG  190 (260)
T ss_pred             CcccccCCcccccccCHhHhccCCcCccccchHHH
Confidence            211  11233456999999874 478899999987

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.87  E-value=4.4e-22  Score=121.14  Aligned_cols=105  Identities=23%  Similarity=0.300  Sum_probs=85.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~---~~~~kl~Dfg~~~~~~~~  153 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE---DGVAKVSDFGLARVGSMG  153 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC---CCcEEECCCccceecccc
Confidence            6899999999999754  35889999999999999999999999999999999999954   345899999987654321


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+..|++||.+. +.++.++|+||||
T Consensus       154 ~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  184 (254)
T cd05083         154 V--DNSKLPVKWTAPEALKHKKFSSKSDVWSYG  184 (254)
T ss_pred             C--CCCCCCceecCHHHhccCCcCchhhHHHHH
Confidence            1  1222345699999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.87  E-value=3.5e-22  Score=121.40  Aligned_cols=107  Identities=26%  Similarity=0.464  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++++|.+++.. ...+++..+..++.|++.|+.+||+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~---~~~~~l~dfg~~~~~~~~~  153 (256)
T cd06612          77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE---EGQAKLADFGVSGQLTDTM  153 (256)
T ss_pred             EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC---CCcEEEcccccchhcccCc
Confidence            589999999999865 467899999999999999999999999999999999999954   3459999999887654432


Q ss_pred             -ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ......++..|++||.+.+ .++.++|+||||
T Consensus       154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G  186 (256)
T cd06612         154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLG  186 (256)
T ss_pred             cccccccCCccccCHHHHhcCCCCchhhHHHHH
Confidence             1223456778999999875 478899999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.87  E-value=2.9e-22  Score=122.07  Aligned_cols=107  Identities=29%  Similarity=0.546  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----HcCCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCH-----KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh-----~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      |||+++++|.+++..    ..++++..+..++.+++.|+.++|     +.+++|+|++|+||+++.   ...++++|||.
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~---~~~~kl~d~g~  156 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA---NNNVKLGDFGL  156 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec---CCCEEEecccc
Confidence            689999999999864    367899999999999999999999     889999999999999964   34599999998


Q ss_pred             ceecCCccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           72 SVFFRPREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +........ .....+++.|++||.+.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG  197 (265)
T cd08217         157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLG  197 (265)
T ss_pred             cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHH
Confidence            877654332 233467888999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.87  E-value=3.7e-22  Score=122.29  Aligned_cols=107  Identities=22%  Similarity=0.323  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+. +.++..++..++.|++.|+.++|+++++|+|++|+|++++.   ...++++|||.+.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~---~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC---CCeEEeCCCCccccccccc
Confidence            6899999999999764 56899999999999999999999999999999999999953   4469999999887654322


Q ss_pred             cc-c---cccccccccccccccc-cCCCccceeecC
Q 033837           80 QF-N---ELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~-~---~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. .   ...++..|++||.+.+ .++.++|+||||
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  196 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG  196 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHH
Confidence            11 1   1122356999999874 588999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.87  E-value=3.2e-22  Score=123.71  Aligned_cols=106  Identities=33%  Similarity=0.572  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      +||+++++|.+++.. .++++..+..++.|++.++.++|+++++|+||+|.||+++.   ...++++|||.+....... 
T Consensus        95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~d~g~~~~~~~~~~  170 (285)
T cd06648          95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFCAQVSKEVP  170 (285)
T ss_pred             EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC---CCcEEEcccccchhhccCCc
Confidence            578999999998876 67889999999999999999999999999999999999954   4469999999776543222 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|++||.+.+ .++.++|+||+|
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  202 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLG  202 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHH
Confidence            1223457888999999874 488899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.87  E-value=4.7e-22  Score=124.22  Aligned_cols=107  Identities=20%  Similarity=0.287  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|++.+++...  ..+++..+..++.|++.|+.|||+++++|+|++|+||+++.+   ..++++||+.+......
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~---~~~kl~d~~~~~~~~~~  154 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD---GKVVLSGLRYSVSMIKH  154 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC---CceEEecCccceeeccc
Confidence            6899999999998753  568899999999999999999999999999999999999643   45899999977654321


Q ss_pred             cc--------cccccccccccccccccc---cCCCccceeecC
Q 033837           79 EQ--------FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--------~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ..        .....++..|++||.+.+   .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G  197 (314)
T cd08216         155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG  197 (314)
T ss_pred             cccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHH
Confidence            11        112345667999999863   378899999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=6.4e-22  Score=121.37  Aligned_cols=107  Identities=25%  Similarity=0.438  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.++|+.+++|+|++|+||+++   ....++++|||.+....... 
T Consensus        87 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~  163 (272)
T cd06629          87 LEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGISKKSDDIYD  163 (272)
T ss_pred             EecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeecccccccccccc
Confidence            68999999999998878899999999999999999999999999999999999995   34569999999876543211 


Q ss_pred             --ccccccccccccccccccc-c--CCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-N--YGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~--~~~~~d~wslg  110 (110)
                        ......++..|++||.+.. .  ++.++|+||+|
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG  199 (272)
T cd06629         164 NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLG  199 (272)
T ss_pred             ccccccccCCccccCHHHhccccCCCCccchhHHHH
Confidence              1122356778999998863 2  68899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.87  E-value=3.4e-22  Score=121.86  Aligned_cols=107  Identities=26%  Similarity=0.491  Sum_probs=90.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.....+++..+..++.|++.++.++|+ .+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~---~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS---KGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC---CCCEEEccCccceecccCC
Confidence            5899999999999887889999999999999999999999 99999999999999954   4559999999887654333


Q ss_pred             cc-ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF-NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~-~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. ....++..|++||.+.. .++.++|+||||
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG  187 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLG  187 (264)
T ss_pred             CcccceeecccccCHhhhCCCCCCchhhHHHHH
Confidence            22 23456778999999874 478899999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.87  E-value=3.6e-22  Score=124.17  Aligned_cols=106  Identities=32%  Similarity=0.573  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+++++|.+++.. ..+++.++..++.+++.++.+||+.+++|+||+|+||+++.   ...++++|||.+........
T Consensus        95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~---~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEccCccchhcccccc
Confidence            588999999998754 46899999999999999999999999999999999999954   34599999998765533221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+ .++.++|+||||
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  202 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  202 (296)
T ss_pred             cCCCcCCCccccCcchhcCCCCCchhhHHHHH
Confidence             123457788999999874 488899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.87  E-value=4.4e-22  Score=122.81  Aligned_cols=107  Identities=29%  Similarity=0.522  Sum_probs=87.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++++.+.....+...+++.++..++.+++.|+.|||+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~---~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE---SGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEEeeecccccCCCcc
Confidence            588988777666666677999999999999999999999999999999999999954   4559999999887654432 


Q ss_pred             -cccccccccccccccccc-c-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                       ......++..|++||.+. . .++.++|+||+|
T Consensus       156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG  189 (288)
T cd07833         156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIG  189 (288)
T ss_pred             ccccCcccccCCcCCchhcCCCCcCchhhHHHHH
Confidence             223346678899999987 3 478899999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.87  E-value=4.9e-22  Score=121.04  Aligned_cols=107  Identities=33%  Similarity=0.462  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||++....... 
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~---~~~~~l~dfg~~~~~~~~~~  148 (265)
T cd05579          72 MEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSKVGLVRRQ  148 (265)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC---CCCEEEEecccchhcccCcc
Confidence            589999999999988778999999999999999999999999999999999999954   3459999999876543221 


Q ss_pred             --------ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 --------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 --------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                              ......++..|++||.... .++.++|+||||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG  188 (265)
T cd05579         149 INLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLG  188 (265)
T ss_pred             cccccccccccCcccCccccCHHHhcCCCCCcchhhHHHH
Confidence                    1122356778999998874 478899999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.87  E-value=5.1e-22  Score=122.42  Aligned_cols=106  Identities=29%  Similarity=0.528  Sum_probs=87.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++.. ...+++.++..++.|++.++.|+|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcEEEeeeeecccccCCC
Confidence            6889 8999998865 467999999999999999999999999999999999999954   4458999999887654332


Q ss_pred             --ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                        ......++..|++||.+.+  .++.++|+||+|
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  188 (286)
T cd07832         154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVG  188 (286)
T ss_pred             CCccccccCcccccCceeeeccccCCchhHHHHHH
Confidence              1233467888999998863  368899999987

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.87  E-value=5.7e-22  Score=120.94  Aligned_cols=107  Identities=28%  Similarity=0.474  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+++++|.+++.+...+++..+..++.+++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+........
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~---~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEcccccccccCCCCC
Confidence            589999999999988777899999999999999999999999999999999999954   44599999998876543322


Q ss_pred             c-----ccccccccccccccccc-c---CCCccceeecC
Q 033837           81 F-----NELVGSLYYMALEVLKR-N---YGPEVDVWSML  110 (110)
Q Consensus        81 ~-----~~~~~~~~~~~pe~~~~-~---~~~~~d~wslg  110 (110)
                      .     ....+++.|++||.+.+ .   +..++|+||||
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G  193 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG  193 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence            1     12356778999999863 3   67899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.87  E-value=5.5e-22  Score=121.42  Aligned_cols=110  Identities=23%  Similarity=0.265  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAK-------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~   71 (110)
                      |||+++++|.+++...       ..+.+.++..++.|++.|+.|+|+++++|+|++|+||+++..+  ....++++|||.
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            6899999999998642       2377899999999999999999999999999999999997543  223689999998


Q ss_pred             ceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           72 SVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +........   ......+..|++||.+. +.++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  200 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG  200 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHH
Confidence            865532211   11223456799999987 4588999999987

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.87  E-value=4.4e-22  Score=132.76  Aligned_cols=94  Identities=26%  Similarity=0.363  Sum_probs=71.8

Q ss_pred             CCCcCCCCHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC
Q 033837            1 MKLCEEGELVDRIVAKGH--------------------YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK   60 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~--------------------~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~   60 (110)
                      |||+.+++|.+++.....                    ..+..+..++.|++.|+.|+|+++|+||||||+||+++.+  
T Consensus       214 ~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~--  291 (566)
T PLN03225        214 WRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEG--  291 (566)
T ss_pred             EEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCC--
Confidence            578999999998864321                    1234567899999999999999999999999999999642  


Q ss_pred             CceEEEeecccceecCCcc--ccccccccccccccccc
Q 033837           61 SFSLKAIDFGLSVFFRPRE--QFNELVGSLYYMALEVL   96 (110)
Q Consensus        61 ~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~pe~~   96 (110)
                      ...+|++|||++..+....  ......+++.|+|||.+
T Consensus       292 ~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        292 SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             CCcEEEEeCCCccccccccccCCcccccCCCccChHHh
Confidence            3459999999987653321  12345778899999965

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.87  E-value=4e-22  Score=125.41  Aligned_cols=107  Identities=18%  Similarity=0.246  Sum_probs=83.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|++.+++...  ..+++..+..++.|++.|+.|+|+++++|+||+|+||+++.+   ..+++.||+........
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~---~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD---GKVYLSGLRSNLSMINH  154 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC---CcEEEcccchhhccccc
Confidence            6899999999998643  458999999999999999999999999999999999999643   34888898754332211


Q ss_pred             cc--------cccccccccccccccccc---cCCCccceeecC
Q 033837           79 EQ--------FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--------~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ..        .....++..|++||.+.+   .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG  197 (327)
T cd08227         155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG  197 (327)
T ss_pred             cccccccccccccccceecccChHHhhcccCCCCchhhHHHHH
Confidence            10        011245667999999863   378899999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.87  E-value=4.3e-22  Score=122.56  Aligned_cols=105  Identities=26%  Similarity=0.508  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++ |++.+.+... ..+++.++..++.|++.|+.++|+.+++|+|++|+||+++.    ..++++|||.+.......
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC----CCeEEEecccccccccCC
Confidence            57886 5888887654 57899999999999999999999999999999999999954    569999999887664433


Q ss_pred             cccccccccccccccccc-c-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      ......++..|++||.+. + .++.++|+||+|
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  186 (282)
T cd07831         154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVG  186 (282)
T ss_pred             CcCCCCCCcccCChhHhhcCCCCCcchhHHHHH
Confidence            333445678899999764 3 368899999987

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.86  E-value=5.9e-22  Score=122.65  Aligned_cols=107  Identities=25%  Similarity=0.475  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++..    ...+++..+..++.|++.|+.++|+.+++|+|++|+||+++.+   ..++++|||.+....
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~---~~~kl~dfg~~~~~~  179 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLT  179 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC---CCEEEeecccchhcc
Confidence            589999999998752    3578999999999999999999999999999999999999543   458999999876654


Q ss_pred             Cccc-cccccccccccccccccc------cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR------NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~------~~~~~~d~wslg  110 (110)
                      .... .....++..|++||.+..      .++.++|+||+|
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  220 (291)
T cd06639         180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLG  220 (291)
T ss_pred             cccccccCccCCccccChhhhcCCCCcccccCCccchHHHH
Confidence            3221 123456778999998752      257899999987

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.86  E-value=1.8e-22  Score=123.32  Aligned_cols=106  Identities=26%  Similarity=0.468  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++... ..+++..+..++.|++.++.++|+ .+++|+|++|+||+++.   ...++++|||.+......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~---~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS---RGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC---CCCEEEeecccchhhHHH
Confidence            5789989999999765 789999999999999999999999 99999999999999954   445999999987655322


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. ....++..|++||.+.+ .++.++|+||+|
T Consensus       155 ~~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG  186 (265)
T cd06605         155 LA-KTFVGTSSYMAPERIQGNDYSVKSDIWSLG  186 (265)
T ss_pred             Hh-hcccCChhccCHHHHcCCCCCchhhHHHHH
Confidence            21 12556778999999875 488899999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.86  E-value=4.6e-22  Score=122.68  Aligned_cols=107  Identities=25%  Similarity=0.468  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++++++.++......+++.++..++.|++.++.|||+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~---~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07846          79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ---SGVVKLCDFGFARTLAAPGE  155 (286)
T ss_pred             EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCcEEEEeeeeeeeccCCcc
Confidence            589998888887766667999999999999999999999999999999999999954   4459999999887653322 


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......++..|++||.+.+  .++.++|+||||
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  188 (286)
T cd07846         156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVG  188 (286)
T ss_pred             ccCcccceeeccCcHHhccccccCchHhHHHHH
Confidence            2233456788999998864  367889999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=5.5e-22  Score=121.95  Aligned_cols=106  Identities=28%  Similarity=0.563  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.. +.+++..+..++.+++.++.++|+.+++|+|++|+||+++.   ...++++|||.+........
T Consensus        81 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06917          81 MEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN---TGNVKLCDFGVAALLNQNSS  156 (277)
T ss_pred             EecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC---CCCEEEccCCceeecCCCcc
Confidence            689999999998755 47899999999999999999999999999999999999954   44699999998876543322


Q ss_pred             -cccccccccccccccccc--cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+  .++.++|+||||
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  189 (277)
T cd06917         157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLG  189 (277)
T ss_pred             ccccccCCcceeCHHHhccCCccccchhHHHHH
Confidence             223467888999998863  368899999987

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.86  E-value=7.3e-22  Score=122.35  Aligned_cols=106  Identities=26%  Similarity=0.448  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      |||+.+ +|.+.+... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+...... 
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~---~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN---RGILKICDFGLAREYGSPL  160 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC---CCcEEEeecCceeeccCCc
Confidence            578874 888888654 45899999999999999999999999999999999999954   456999999988766443 


Q ss_pred             cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .......+++.|++||.+.+  .++.++|+||+|
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG  194 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVG  194 (293)
T ss_pred             cccccccccccccCchhhcCCccccchhhHHHHH
Confidence            22233456778999998864  267899999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.86  E-value=5.9e-22  Score=121.31  Aligned_cols=107  Identities=21%  Similarity=0.341  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++.++..++.+++.|+.|+|+.+++|+|++|.||+++.   ...++++|||.+.......
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~---~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS---NLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC---CCcEEECCCccceeccccc
Confidence            6899999999998754 67899999999999999999999999999999999999953   4458999999887654322


Q ss_pred             cc--cc--cccccccccccccc-ccCCCccceeecC
Q 033837           80 QF--NE--LVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~--~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  ..  ...++.|++||.+. +.++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG  197 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFG  197 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHH
Confidence            11  11  11234699999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.86  E-value=4.2e-22  Score=125.52  Aligned_cols=106  Identities=28%  Similarity=0.429  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. ++|.+.+.....+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+..+.....
T Consensus        85 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~---~~~~kl~Dfg~a~~~~~~~~  160 (332)
T cd07857          85 EELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFSENPG  160 (332)
T ss_pred             Eeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC---CCCEEeCcCCCceecccccc
Confidence            35565 689998887788999999999999999999999999999999999999954   34599999998876532211


Q ss_pred             -----cccccccccccccccccc--cCCCccceeecC
Q 033837           81 -----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 -----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                           .....+++.|++||.+.+  .++.++|+||+|
T Consensus       161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slG  197 (332)
T cd07857         161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVG  197 (332)
T ss_pred             cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHH
Confidence                 123467888999998763  478899999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.86  E-value=2.5e-22  Score=119.15  Aligned_cols=92  Identities=27%  Similarity=0.577  Sum_probs=79.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccccccc
Q 033837           17 GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL   96 (110)
Q Consensus        17 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~   96 (110)
                      +.++...++.++.+++.|+.|||++||+|||+||.|+++++..  -.++++|+|++.+..+....+-...+.+|-.||.+
T Consensus       127 ~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~--rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELL  204 (338)
T KOG0668|consen  127 PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL  204 (338)
T ss_pred             hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh--ceeeeeecchHhhcCCCceeeeeeehhhcCCchhe
Confidence            3577888999999999999999999999999999999997543  35899999999888777666667778888999999


Q ss_pred             c--ccCCCccceeecC
Q 033837           97 K--RNYGPEVDVWSML  110 (110)
Q Consensus        97 ~--~~~~~~~d~wslg  110 (110)
                      .  ..|+.+.|+||||
T Consensus       205 Vdy~~YDYSLD~WS~G  220 (338)
T KOG0668|consen  205 VDYQMYDYSLDMWSLG  220 (338)
T ss_pred             eechhccccHHHHHHH
Confidence            7  3489999999997

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.86  E-value=4.3e-22  Score=122.75  Aligned_cols=106  Identities=27%  Similarity=0.459  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||++ +++.+++...   ..+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.....
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~  153 (285)
T cd07861          78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGI  153 (285)
T ss_pred             EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC---CCcEEECcccceeecCC
Confidence            68887 5888877532   56899999999999999999999999999999999999954   34599999998865432


Q ss_pred             ccc-cccccccccccccccccc--cCCCccceeecC
Q 033837           78 REQ-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ... .....+++.|+|||.+.+  .++.++|+||||
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  189 (285)
T cd07861         154 PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIG  189 (285)
T ss_pred             CcccccCCcccccccChHHhcCCCCcCcHHHHHHHH
Confidence            221 223356788999998863  368899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=7.7e-22  Score=120.81  Aligned_cols=107  Identities=28%  Similarity=0.521  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++..    ...+++..+..++.|++.|+.|||+.+++|+|++|+||+++.   ...++++|||.+....
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~---~~~~~l~d~~~~~~~~  164 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK---NAEVKLVDFGVSAQLD  164 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc---CCeEEECCCccceecc
Confidence            689999999998754    357999999999999999999999999999999999999954   3459999999876653


Q ss_pred             Cccc-cccccccccccccccccc------cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR------NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~------~~~~~~d~wslg  110 (110)
                      .... .....++..|+|||.+..      .++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  205 (275)
T cd06608         165 STLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG  205 (275)
T ss_pred             cchhhhcCccccccccCHhHhcccccccCCccccccHHHhH
Confidence            3221 223457888999998742      267789999997

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.86  E-value=2.4e-22  Score=115.72  Aligned_cols=106  Identities=27%  Similarity=0.559  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +|||.. +|..+... ++.+....++.++-|++.|+.++|+.++.|||++|+|+++   ..++.+|+.|||+++-+....
T Consensus        80 fe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   80 FEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             HHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce
Confidence            367764 78887765 4789999999999999999999999999999999999999   455669999999998776543


Q ss_pred             -cccccccccccccccccccc--CCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKRN--YGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~~--~~~~~d~wslg  110 (110)
                       +.....-|.+|++|.++-+.  |+++.|+||.|
T Consensus       156 rcysaevvtlwyrppdvlfgakly~tsidmwsag  189 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  189 (292)
T ss_pred             EeeeceeeeeeccCcceeeeeehhccchHhhhcc
Confidence             34445678999999999754  99999999976

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.86  E-value=8e-22  Score=120.33  Aligned_cols=107  Identities=23%  Similarity=0.322  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..++..++..++.|++.|+.+||+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~~~~  155 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE---TLCCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC---CCCEEEccCcceeecCCC
Confidence            6899999999988653  46889999999999999999999999999999999999954   445999999988765422


Q ss_pred             ccc--cccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ...  ....++..|++||.+. ..++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG  190 (260)
T cd05067         156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG  190 (260)
T ss_pred             CcccccCCcccccccCHHHhccCCcCcccchHHHH
Confidence            211  1223456799999887 4578899999987

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.86  E-value=7.2e-22  Score=122.21  Aligned_cols=106  Identities=23%  Similarity=0.426  Sum_probs=84.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ +|.+++... ..+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~~  157 (291)
T cd07844          82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE---RGELKLADFGLARAKSVPS  157 (291)
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC---CCCEEECccccccccCCCC
Confidence            688875 899988654 56899999999999999999999999999999999999954   3459999999876543211


Q ss_pred             c-cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . .....++..|+|||.+.+  .++.++|+||+|
T Consensus       158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG  191 (291)
T cd07844         158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVG  191 (291)
T ss_pred             ccccccccccccCCcHHhhcCcccCcHHHHHHHH
Confidence            1 122345678999998863  378899999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.86  E-value=1.5e-21  Score=120.32  Aligned_cols=106  Identities=26%  Similarity=0.479  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+.+ ++.+++...  ..+++.++..++.|++.|+.+||+.+++|+|++|+||+++.+   ..++++|||.+......
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~---~~~~l~dfg~~~~~~~~  160 (287)
T cd07838          85 FEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD---GQVKIADFGLARIYSFE  160 (287)
T ss_pred             ehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC---CCEEEeccCcceeccCC
Confidence            577764 888888654  358999999999999999999999999999999999999543   56999999988766443


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......++..|++||.+.+ .++.++|+||+|
T Consensus       161 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G  193 (287)
T cd07838         161 MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVG  193 (287)
T ss_pred             cccccccccccccChHHhccCCCCCcchhhhHH
Confidence            33333456778999999874 478899999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.86  E-value=4.4e-22  Score=122.48  Aligned_cols=106  Identities=25%  Similarity=0.470  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++. .+.+++..+..++.+++.|+.|+|+++++|+|++|+||+++.+   ..++++|||.+..+.....
T Consensus        81 ~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          81 MEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC---CCEEEccccccccccCcch
Confidence            68999999998875 4578899999999999999999999999999999999999543   4599999998866543322


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  188 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLG  188 (277)
T ss_pred             hhhcccCcccccCHHHhCcCCCchhhhHHHHH
Confidence             122356778999999874 478899999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.86  E-value=9.2e-22  Score=126.86  Aligned_cols=89  Identities=20%  Similarity=0.238  Sum_probs=70.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc---ccccccccccccccc
Q 033837           19 YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEV   95 (110)
Q Consensus        19 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~   95 (110)
                      ++..++..++.|++.|+.|+|+.+++|+|++|.||+++.   ...++++|||++........   .....+++.|++||.
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~---~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~  312 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE---GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES  312 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC---CCEEEEEecCcceecccccccccCCCcCCCCceeChHH
Confidence            556678889999999999999999999999999999954   44689999999876432211   112345677999999


Q ss_pred             ccc-cCCCccceeecC
Q 033837           96 LKR-NYGPEVDVWSML  110 (110)
Q Consensus        96 ~~~-~~~~~~d~wslg  110 (110)
                      +.+ .++.++|+||||
T Consensus       313 ~~~~~~~~~~DvwslG  328 (401)
T cd05107         313 IFNNLYTTLSDVWSFG  328 (401)
T ss_pred             hcCCCCCcHhHHHHHH
Confidence            874 478899999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.86  E-value=5.3e-22  Score=122.87  Aligned_cols=107  Identities=22%  Similarity=0.276  Sum_probs=84.6

Q ss_pred             CCCcCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK------------------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV   56 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~   56 (110)
                      |||+.+|+|.+++.+.                        ..++...+..++.|++.|+.|+|+.+++|+|++|+||+++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~  161 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA  161 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEc
Confidence            5899999999987542                        2477888999999999999999999999999999999995


Q ss_pred             eCCCCceEEEeecccceecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           57 NKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        57 ~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .   ...++++|||.+.........   ....++..|++||.+.+ .++.++|+||||
T Consensus       162 ~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  216 (290)
T cd05045         162 E---GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFG  216 (290)
T ss_pred             C---CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHH
Confidence            4   346999999988654322211   11234567999998764 488899999987

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=6.2e-22  Score=120.74  Aligned_cols=107  Identities=21%  Similarity=0.274  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.  ..++..++..++.+++.|+.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~---~~~~~l~d~g~~~~~~~~  156 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE---NLVCKIADFGLARLIEDD  156 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC---CCCEEECccccceeccch
Confidence            6899999999999754  46899999999999999999999999999999999999954   345899999988765432


Q ss_pred             ccc--ccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQF--NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~--~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...  .....+..|++||.+.+ .++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  191 (261)
T cd05034         157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFG  191 (261)
T ss_pred             hhhhhhccCCCccccCHHHhccCCcCchhHHHHHH
Confidence            111  11223457999998874 478899999987

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.86  E-value=7.9e-22  Score=124.51  Aligned_cols=106  Identities=25%  Similarity=0.422  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. ++|.+++...+++++..+..++.|++.|+.|||+++++|+|++|+||+++.   ...++++|||++....... 
T Consensus        88 ~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~---~~~~kL~Dfg~~~~~~~~~~  163 (337)
T cd07858          88 YELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSEKGD  163 (337)
T ss_pred             EeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEECcCccccccCCCcc
Confidence            57775 689998888888999999999999999999999999999999999999954   3459999999887654331 


Q ss_pred             cccccccccccccccccc--ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                      ......++..|++||.+.  ..++.++|+||||
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  196 (337)
T cd07858         164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVG  196 (337)
T ss_pred             cccccccccCccChHHHhcCCCCCCcccHHHHH
Confidence            122345678899999875  3488899999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.86  E-value=2.3e-21  Score=117.49  Aligned_cols=107  Identities=31%  Similarity=0.504  Sum_probs=89.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++++|.+++.....+++..+..++.|++.++.++|+++++|+|++|+||+++.   ...++++|||.+...... .
T Consensus        72 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~---~~~~~l~d~~~~~~~~~~~~  148 (250)
T cd05123          72 LEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA---DGHIKLTDFGLAKELSSEGS  148 (250)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC---CCcEEEeecCcceecccCCC
Confidence            688999999999988878999999999999999999999999999999999999954   345899999988765432 1


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......++..|++||...+ ..+.++|+||||
T Consensus       149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG  180 (250)
T cd05123         149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLG  180 (250)
T ss_pred             cccCCcCCccccChHHhCCCCCCchhhHHHHH
Confidence            2233456778999999874 477889999987

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.86  E-value=7.9e-22  Score=121.41  Aligned_cols=106  Identities=26%  Similarity=0.485  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.. +++++.++..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE---QGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC---CCCEEEcccccceeccCCcc
Confidence            689999999998854 57889999999999999999999999999999999999954   34599999998866543322


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+ .++.++|+||||
T Consensus       157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG  188 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLG  188 (277)
T ss_pred             ccccccCcccccCHhHhccCCCccHHHHHHHH
Confidence             122356778999999874 478899999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.86  E-value=1.1e-21  Score=119.79  Aligned_cols=107  Identities=29%  Similarity=0.486  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++++|.+++...   ..+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+.....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~---~~~~~l~df~~~~~~~~  154 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE---DGSVKIADFGVSASLAD  154 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC---CCCEEEcccchHHHhcc
Confidence            6899999999999753   46899999999999999999999999999999999999954   34599999998866543


Q ss_pred             cccc-----cccccccccccccccc-c-cCCCccceeecC
Q 033837           78 REQF-----NELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~-----~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      ....     ....++..|++||.+. . .++.++|+||||
T Consensus       155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG  194 (267)
T cd06610         155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG  194 (267)
T ss_pred             CccccccccccccCChhhcChHHHccccCcCcccchHhHh
Confidence            3221     2235778899999886 3 478899999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.86  E-value=6.4e-22  Score=123.10  Aligned_cols=106  Identities=21%  Similarity=0.409  Sum_probs=85.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. ++|.+++... ..+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~  158 (301)
T cd07873          83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE---RGELKLADFGLARAKSIPT  158 (301)
T ss_pred             Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC---CCcEEECcCcchhccCCCC
Confidence            68887 5888888654 56899999999999999999999999999999999999954   3459999999886543222


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|++||.+.+  .++.++|+||||
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG  192 (301)
T cd07873         159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVG  192 (301)
T ss_pred             CcccccceeecccCcHHHhCCCCCccHHHHHHHH
Confidence             1223456788999998864  377899999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.86  E-value=1.2e-21  Score=121.07  Aligned_cols=107  Identities=28%  Similarity=0.453  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.....+++..+..++.|++.++.++|+.+++|+|++|.||+++.   ...++++|||.+........
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEEECccccccccccc
Confidence            689999999999987788999999999999999999999999999999999999954   34589999998765433221


Q ss_pred             --cccccccccccccccccc-c--CCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-N--YGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-~--~~~~~d~wslg  110 (110)
                        .....++..|++||.+.+ .  ++.++|+||+|
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG  195 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG  195 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence              122356788999999863 2  67889999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.86  E-value=1.1e-21  Score=118.47  Aligned_cols=107  Identities=33%  Similarity=0.571  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++++|.+.+... ..+++..+..++.|++.++.++|+.+++|+|++|.||+++.   ...++++|||.+.......
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~  152 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTK  152 (253)
T ss_pred             EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc---CCeEEEeeccccccccccc
Confidence            5889999999998765 67999999999999999999999999999999999999954   4469999999887665433


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......++..|++||.+.+ .++.++|+||||
T Consensus       153 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG  184 (253)
T cd05122         153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLG  184 (253)
T ss_pred             cccceecCCcccCHHHHcCCCCCccccHHHHH
Confidence            2233456778999999874 478899999987

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.86  E-value=9.3e-22  Score=121.15  Aligned_cols=107  Identities=22%  Similarity=0.281  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAK--------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      +||+++++|.+++...        ..+++.++..++.+++.|+.|||+++++|+|++|+||+++.   ...++++|||++
T Consensus        88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~---~~~~kl~d~g~~  164 (280)
T cd05043          88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE---ELQVKITDNALS  164 (280)
T ss_pred             EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC---CCcEEECCCCCc
Confidence            4678889999998643        45889999999999999999999999999999999999953   356899999998


Q ss_pred             eecCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           73 VFFRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +.+......   ....++..|++||.+.+ .++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  206 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFG  206 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhH
Confidence            765332211   11234556999998874 488899999987

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.1e-21  Score=118.99  Aligned_cols=107  Identities=23%  Similarity=0.242  Sum_probs=85.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+. ..++...+..++.+++.++.++|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        71 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~---~~~~~l~d~g~~~~~~~~~  147 (251)
T cd05041          71 MELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE---NNVLKISDFGMSREEEGGI  147 (251)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC---CCcEEEeeccccccccCCc
Confidence            5889999999998653 56889999999999999999999999999999999999954   3459999999876543221


Q ss_pred             cc---cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..   .....+..|++||.+. +.++.++|+||||
T Consensus       148 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  182 (251)
T cd05041         148 YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYG  182 (251)
T ss_pred             ceeccccCcceeccCChHhhccCCCCcchhHHHHH
Confidence            11   1112244599999887 4588999999987

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.86  E-value=1.2e-21  Score=119.22  Aligned_cols=107  Identities=22%  Similarity=0.373  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++..+..++.+++.++.++|+++++|+|++|.||+++   ....++++|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~  154 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQ  154 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCc
Confidence            5899999999998754 5688999999999999999999999999999999999995   34468999999876553322


Q ss_pred             cc--cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  ....++..|++||.+. +.++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG  188 (256)
T cd05112         155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFG  188 (256)
T ss_pred             ccccCCCccchhhcCHhHhccCCcChHHHHHHHH
Confidence            11  1123345799999887 4588899999987

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.86  E-value=9.2e-22  Score=124.06  Aligned_cols=106  Identities=26%  Similarity=0.432  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. ++|.+++...+.+++..+..++.|++.|+.|||+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        87 ~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          87 MDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE---DCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             Eehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEecccccceeecccCc
Confidence            57885 589998877778999999999999999999999999999999999999954   44599999998866533221


Q ss_pred             -----cccccccccccccccccc--cCCCccceeecC
Q 033837           81 -----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 -----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                           .....++..|++||.+.+  .++.++|+||+|
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG  199 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVG  199 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHH
Confidence                 123467788999998753  478899999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.86  E-value=1.9e-21  Score=118.14  Aligned_cols=106  Identities=26%  Similarity=0.409  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++.+    ...+++..+..++.+++.|+.++|+.+++|+|++|.||+++.   ...++++|||.+....
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~kl~d~g~~~~~~  154 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLVKIGDLGISKVLK  154 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcEEEeeccchhhhc
Confidence            688999999998865    356889999999999999999999999999999999999965   3458999999876654


Q ss_pred             Cccccccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. ......+++.|++||.+.+ .++.++|+||+|
T Consensus       155 ~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG  188 (256)
T cd08530         155 KN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG  188 (256)
T ss_pred             cC-CcccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence            43 2233456788999999875 478899999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.86  E-value=1.7e-21  Score=118.55  Aligned_cols=107  Identities=22%  Similarity=0.483  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++.++..++.|++.++.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~---~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTIKLGDFGIARVLNST  154 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEEeeccceeecCcc
Confidence            5899999999988754  35889999999999999999999999999999999999954   345999999988665432


Q ss_pred             cc-cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. .....+++.|++||.+.+ .++.++|+||||
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG  188 (256)
T cd08218         155 VELARTCIGTPYYLSPEICENRPYNNKSDIWALG  188 (256)
T ss_pred             hhhhhhccCCccccCHHHhCCCCCCCccchhHHH
Confidence            21 122356778999999874 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.9e-21  Score=123.74  Aligned_cols=110  Identities=26%  Similarity=0.437  Sum_probs=93.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      +|||+|.||.-+++....+.+..++.+.-||++|+.||....  |||-||+|.||++......+.+||.|||++..+.+.
T Consensus       547 LEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMddd  626 (775)
T KOG1151|consen  547 LEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDD  626 (775)
T ss_pred             eeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCC
Confidence            699999999999998888999999999999999999999764  999999999999987667788999999999887543


Q ss_pred             cc--------ccccccccccccccccc-c--c--CCCccceeecC
Q 033837           79 EQ--------FNELVGSLYYMALEVLK-R--N--YGPEVDVWSML  110 (110)
Q Consensus        79 ~~--------~~~~~~~~~~~~pe~~~-~--~--~~~~~d~wslg  110 (110)
                      .-        .....||.+|++||-+. +  +  .+.++|+||.|
T Consensus       627 Sy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvG  671 (775)
T KOG1151|consen  627 SYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVG  671 (775)
T ss_pred             ccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeee
Confidence            21        12357899999999664 3  2  57799999987

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=9.4e-22  Score=121.61  Aligned_cols=107  Identities=19%  Similarity=0.271  Sum_probs=84.3

Q ss_pred             CCCcCCCCHHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC
Q 033837            1 MKLCEEGELVDRIVAKG----------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK   58 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~   58 (110)
                      |||+++|+|.+++....                      .+++.++..++.|++.|+.++|+++++|+|++|.||+++. 
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~-  165 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGE-  165 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecC-
Confidence            58999999999986431                      3677888999999999999999999999999999999954 


Q ss_pred             CCCceEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           59 KKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        59 ~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                        ...++++|||.+........   ......+..|++||.+. ..++.++|+||||
T Consensus       166 --~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  219 (288)
T cd05050         166 --NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYG  219 (288)
T ss_pred             --CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHH
Confidence              44589999998765432211   11123345699999887 4588999999987

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=1.1e-21  Score=121.21  Aligned_cols=106  Identities=26%  Similarity=0.394  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+.+.+++..+..++.+++.++.|+|+ .+++|+|++|+||+++.   ...++++|||++.......
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~l~d~gl~~~~~~~~  158 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS---RGQIKLCDFGVSGELINSI  158 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC---CCcEEEccCCcccchhhhc
Confidence            6899999999998887889999999999999999999997 58999999999999953   4469999999876542221


Q ss_pred             cccccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                       .....++..|++||.+. +.++.++|+||+|
T Consensus       159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG  189 (284)
T cd06620         159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLG  189 (284)
T ss_pred             -cCccccCcccCCHHHHccCCCCccchHHHHH
Confidence             12346788899999886 4588899999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.86  E-value=1.2e-21  Score=121.28  Aligned_cols=106  Identities=22%  Similarity=0.376  Sum_probs=83.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. +++.+++.. ...+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.   ...++++|||.+.......
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~---~~~~~l~Dfg~~~~~~~~~  157 (291)
T cd07870          82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY---LGELKLADFGLARAKSIPS  157 (291)
T ss_pred             Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC---CCcEEEeccccccccCCCC
Confidence            57886 677777654 356788899999999999999999999999999999999953   4469999999876543221


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|++||.+.+  .++.++|+||||
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  191 (291)
T cd07870         158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAG  191 (291)
T ss_pred             CCCCCccccccccCCceeecCCCCCcHHHHHHHH
Confidence             1223356788999999864  378889999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.85  E-value=2.4e-21  Score=120.02  Aligned_cols=107  Identities=30%  Similarity=0.505  Sum_probs=84.8

Q ss_pred             CCCcCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAK-----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++ ++.+++...     ..+++..+..++.|++.|+.|||+++++|+|++|+||+++.+  ...++++|||.+...
T Consensus        85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~--~~~~kl~dfg~~~~~  161 (295)
T cd07837          85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ--KGLLKIADLGLGRAF  161 (295)
T ss_pred             eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC--CCeEEEeecccceec
Confidence            688885 888887542     357999999999999999999999999999999999999641  446899999988765


Q ss_pred             CCcc-ccccccccccccccccccc--cCCCccceeecC
Q 033837           76 RPRE-QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .... ......+++.|+|||.+.+  .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG  199 (295)
T cd07837         162 SIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVG  199 (295)
T ss_pred             CCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHH
Confidence            3221 1222355778999998863  378899999987

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.85  E-value=2.5e-21  Score=119.56  Aligned_cols=106  Identities=25%  Similarity=0.394  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++...   ..+++..+..++.+++.++.|||+ .+++|+||+|+||+++.   ...++++|||.+....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~  154 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQVKLCDFGVSGNLV  154 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCCEEEeecCCccccc
Confidence            6899999998888653   479999999999999999999997 59999999999999954   4459999999876553


Q ss_pred             Cccccccccccccccccccccc-------cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR-------NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~-------~~~~~~d~wslg  110 (110)
                      ... .....+++.|++||.+.+       .++.++|+||+|
T Consensus       155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  194 (286)
T cd06622         155 ASL-AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLG  194 (286)
T ss_pred             CCc-cccCCCccCccCcchhcCCCCCccCCCCcccchHhHH
Confidence            322 123356778999998742       147789999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=2.1e-21  Score=118.93  Aligned_cols=108  Identities=29%  Similarity=0.446  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHY--TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++++|.+++... ..+  ++..+..++.|++.|+.|+|+++++|+|++|.||+++.+  ...++++|||.+.....
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKRLAG  161 (268)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCeEEEecchhheeccc
Confidence            5899999999998754 555  888899999999999999999999999999999999542  23589999998765532


Q ss_pred             ccc-cccccccccccccccccc---cCCCccceeecC
Q 033837           78 REQ-FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~-~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ... .....+++.|++||.+..   .++.++|+||+|
T Consensus       162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slG  198 (268)
T cd06624         162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLG  198 (268)
T ss_pred             CCCccccCCCCccccChhhhccccccCCchhhhHHHH
Confidence            221 223456788999999853   278899999987

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.85  E-value=1.1e-21  Score=120.13  Aligned_cols=107  Identities=28%  Similarity=0.519  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++++|.+.+.    ....+++..+..++.|++.++.++|+ .+++|+|++|.||+++.   ...++++|||.+...
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~  164 (269)
T cd08528          88 MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE---DDKVTITDFGLAKQK  164 (269)
T ss_pred             EecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC---CCcEEEecccceeec
Confidence            68999999998873    23568999999999999999999996 68999999999999954   445899999988765


Q ss_pred             CCccccccccccccccccccccc-cCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..........++..|++||.+.+ .++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG  200 (269)
T cd08528         165 QPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFG  200 (269)
T ss_pred             ccccccccccCcccCcChhhhcCCCCchHHHHHHHH
Confidence            44333334567788999999874 488999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.85  E-value=1.5e-21  Score=118.48  Aligned_cols=107  Identities=22%  Similarity=0.456  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++...    ..+++.++..++.+++.|+.++|+++++|+|++|+||+++.   ...++++|||.+....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~---~~~~~l~d~~~~~~~~  154 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS---NGLVKLGDFGISKVLS  154 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC---CCcEEECCccceeecc
Confidence            5789999999998753    67999999999999999999999999999999999999954   3458999999887654


Q ss_pred             Ccc-ccccccccccccccccccc-cCCCccceeecC
Q 033837           77 PRE-QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~-~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ... ......+++.|++||.... .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  190 (258)
T cd08215         155 STVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLG  190 (258)
T ss_pred             cCcceecceeeeecccChhHhccCCCCccccHHHHH
Confidence            432 2223467788999998864 478899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.85  E-value=2.5e-21  Score=119.30  Aligned_cols=106  Identities=25%  Similarity=0.363  Sum_probs=83.8

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||++ |+|.+++..    +..+++..+..++.|++.|+.|+|++ +++|+|++|+||+++.   ...++++|||.+...
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~---~~~~kl~dfg~~~~~  154 (283)
T cd06617          79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR---NGQVKLCDFGISGYL  154 (283)
T ss_pred             hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC---CCCEEEeeccccccc
Confidence            57886 577777643    34689999999999999999999997 9999999999999954   345999999988765


Q ss_pred             CCccccccccccccccccccccc-----cCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLKR-----NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~d~wslg  110 (110)
                      ..........++..|++||.+.+     .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG  194 (283)
T cd06617         155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLG  194 (283)
T ss_pred             ccccccccccCCccccChhhcCCcccccccCccccchhhH
Confidence            43322223456788999998752     267899999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.85  E-value=1.4e-21  Score=122.83  Aligned_cols=106  Identities=30%  Similarity=0.445  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++ ++|.+.+.....+++..+..++.+++.|+.+||+.+++|+|++|.||+++.+   ..++++|||.+....... 
T Consensus        83 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~---~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          83 TELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN---CDLKICDFGLARGVDPDED  158 (330)
T ss_pred             ecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEcccCceEeeccccc
Confidence            57777 4888888877789999999999999999999999999999999999999543   459999999887765432 


Q ss_pred             ---ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                         ......+++.|++||.+.+  .++.++|+||+|
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG  194 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVG  194 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHH
Confidence               1233456788999999873  478899999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.85  E-value=2.7e-21  Score=119.06  Aligned_cols=107  Identities=21%  Similarity=0.339  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.... .++...+..++.|++.|+.+||+++++|+|++|+||+++.+   ..++++|||.+.......
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~  163 (284)
T cd05038          87 MEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE---DLVKISDFGLAKVLPEDK  163 (284)
T ss_pred             EecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC---CCEEEcccccccccccCC
Confidence            68999999999997653 68999999999999999999999999999999999999543   559999999887664221


Q ss_pred             cc----cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..    ....++..|++||... ..++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG  199 (284)
T cd05038         164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFG  199 (284)
T ss_pred             cceeccCCCCCcccccCcHHHccCCCCcccchHHHh
Confidence            11    1123345689999886 4588899999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.85  E-value=1.9e-21  Score=120.75  Aligned_cols=106  Identities=33%  Similarity=0.576  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+++++|.+++.+ ..+++..+..++.|++.|+.+||+++++|+|++|+||+++.   ...++++|||.+........
T Consensus        95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~---~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             EecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC---CCCEEEccCcceeccccccc
Confidence            589999999998864 35788999999999999999999999999999999999954   34589999998765543322


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.. .++.++|+||||
T Consensus       171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG  202 (293)
T cd06647         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  202 (293)
T ss_pred             ccccccCChhhcCchhhccCCCCchhhHHHHH
Confidence             223457788999999874 478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.85  E-value=5e-21  Score=119.55  Aligned_cols=102  Identities=28%  Similarity=0.410  Sum_probs=83.3

Q ss_pred             CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-----------------CCceEEEe
Q 033837            7 GELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-----------------KSFSLKAI   67 (110)
Q Consensus         7 g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-----------------~~~~~~l~   67 (110)
                      -++.+++.++  .+++..+++.++.|++.++.+||+.+++|.||||+||++....                 .+..++++
T Consensus       175 ~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vI  254 (415)
T KOG0671|consen  175 LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVI  254 (415)
T ss_pred             hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEE
Confidence            4889999875  4699999999999999999999999999999999999884222                 12358999


Q ss_pred             ecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           68 DFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        68 d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |||.+..-....  ...+.|..|+|||++.+ ..+.++|+||+|
T Consensus       255 DFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiG  296 (415)
T KOG0671|consen  255 DFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIG  296 (415)
T ss_pred             ecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeee
Confidence            999876532221  34567889999999986 589999999998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.85  E-value=2e-21  Score=120.91  Aligned_cols=106  Identities=28%  Similarity=0.534  Sum_probs=84.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ ++.+.+... ..+++.++..++.|++.|+.|||+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        98 ~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~~  173 (310)
T cd07865          98 FEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK---DGILKLADFGLARAFSLSK  173 (310)
T ss_pred             EcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC---CCcEEECcCCCcccccCCc
Confidence            578864 788877654 47899999999999999999999999999999999999953   4469999999887653221


Q ss_pred             c-----cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .     .....++..|+|||.+.+  .++.++|+||+|
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  211 (310)
T cd07865         174 NSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG  211 (310)
T ss_pred             ccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence            1     122356778999998864  368899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=6.1e-22  Score=130.95  Aligned_cols=106  Identities=22%  Similarity=0.353  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      +|||.+|+|.+|+.+.  ..++...+..++.||.+|+.||..++.|||||..+|+++   +.+-.||+.|||+++++...
T Consensus       342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgD  418 (1157)
T KOG4278|consen  342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGD  418 (1157)
T ss_pred             EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCC
Confidence            4899999999999876  458888899999999999999999999999999999999   44556999999999988654


Q ss_pred             cccccccc---cccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVG---SLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~---~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . +....|   ...|.|||-+.- .++.++|+|+||
T Consensus       419 T-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFG  453 (1157)
T KOG4278|consen  419 T-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFG  453 (1157)
T ss_pred             c-eecccCccCcccccCcccccccccccchhhHHHH
Confidence            3 222233   345999999984 599999999997

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.85  E-value=2.7e-21  Score=119.50  Aligned_cols=107  Identities=34%  Similarity=0.591  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++++|.+++.... .++...+..++.+++.++.++|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~  170 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK---DGSVKLADFGFAAQLTKEK  170 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC---CCCEEECccchhhhhccch
Confidence            58999999999998765 8999999999999999999999999999999999999954   3459999999776543322


Q ss_pred             c-cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . .....++..|++||.+.+ .++.++|+||||
T Consensus       171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG  203 (286)
T cd06614         171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLG  203 (286)
T ss_pred             hhhccccCCcccCCHhHhcCCCCCCccccHHHH
Confidence            1 122346778999998874 478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.85  E-value=1.4e-21  Score=119.88  Aligned_cols=104  Identities=27%  Similarity=0.449  Sum_probs=81.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.. +|.....  -.+.-..+..++.|++.|++++|+.+|+||||||+||++.   ....+|+.|||+++.-...-.
T Consensus       100 ~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~---~~~~lKi~dfg~ar~e~~~~~  173 (369)
T KOG0665|consen  100 MELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN---SDCTLKILDFGLARTEDTDFM  173 (369)
T ss_pred             HHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec---chhheeeccchhhcccCcccc
Confidence            345543 4444443  2366688899999999999999999999999999999994   445599999999876544322


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+..+.+|+|||++.+ .|...+||||+|
T Consensus       174 mtpyVvtRyyrapevil~~~~ke~vdiwSvG  204 (369)
T KOG0665|consen  174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  204 (369)
T ss_pred             cCchhheeeccCchheeccCCcccchhhhhh
Confidence            345677889999999874 489999999987

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.85  E-value=2.7e-21  Score=117.21  Aligned_cols=107  Identities=27%  Similarity=0.455  Sum_probs=90.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+...+++..+..++.+++.++.++|+.+++|+|++|+||+++.   ...++++|||.+........
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~~  156 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGDIET  156 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEEEcccccEEecccccc
Confidence            578889999999987779999999999999999999999999999999999999954   34589999998876654332


Q ss_pred             ---ccccccccccccccccccc-CCCccceeecC
Q 033837           81 ---FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        81 ---~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                         .....++..|.+||..... ++.++|+||||
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG  190 (260)
T cd06606         157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLG  190 (260)
T ss_pred             cccccCCCCCccccCHhhhcCCCCCchhhHHHHH
Confidence               2334667889999998744 88899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=4.1e-21  Score=116.45  Aligned_cols=107  Identities=26%  Similarity=0.456  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.++.++|+.+++|+|++|.||+++.   ...++++|||.+........
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCEEEeccccceecCCCcc
Confidence            578999999999987788999999999999999999999999999999999999954   34589999998876644332


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.+ .++.++|+|++|
T Consensus       155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG  186 (254)
T cd06627         155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLG  186 (254)
T ss_pred             cccccccchhhcCHhhhcCCCCCcchhHHHHH
Confidence             223456788999998874 378899999987

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.85  E-value=2.7e-21  Score=120.10  Aligned_cols=106  Identities=35%  Similarity=0.607  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++. ...+++..+..++.|++.++.++|+.+++|+|++|.||+++.   ...++++|||.+........
T Consensus        96 ~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~---~~~~~l~dfg~~~~~~~~~~  171 (292)
T cd06657          96 MEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFGFCAQVSKEVP  171 (292)
T ss_pred             EecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEcccccceecccccc
Confidence            68999999998764 456889999999999999999999999999999999999954   34589999998765543221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.+ .++.++|+||+|
T Consensus       172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG  203 (292)
T cd06657         172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLG  203 (292)
T ss_pred             cccccccCccccCHHHhcCCCCCchhhHHHHH
Confidence             223457788999998864 478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=3.2e-21  Score=118.27  Aligned_cols=107  Identities=19%  Similarity=0.306  Sum_probs=83.0

Q ss_pred             CCCcCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      +||+.+|+|.+++...      ..++...+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+..
T Consensus        86 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~---~~~~kl~dfg~~~~  162 (273)
T cd05074          86 LPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE---NMTVCVADFGLSKK  162 (273)
T ss_pred             EecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC---CCCEEECccccccc
Confidence            3678889998877422      24788999999999999999999999999999999999953   44589999998876


Q ss_pred             cCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......   ....+++.|++||.+.. .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG  202 (273)
T cd05074         163 IYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFG  202 (273)
T ss_pred             ccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHH
Confidence            5332211   11233456899998864 478899999987

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-21  Score=128.28  Aligned_cols=107  Identities=21%  Similarity=0.338  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|||.+++.+.  ........+.++.||++|++||.+.+++|||+.++|+++   +....+|++|||.++.+-..
T Consensus       614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg  690 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSG  690 (807)
T ss_pred             HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccC
Confidence            6899999999999765  334566778899999999999999999999999999999   55567999999999987655


Q ss_pred             ccccc---cccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNE---LVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~---~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .-.+.   ..=...|+|+|.+. +++++++|+|+||
T Consensus       691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafg  726 (807)
T KOG1094|consen  691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFG  726 (807)
T ss_pred             CceeeecceeeeeeehhHHHHHhccccchhhhhhhH
Confidence            43221   12235699999775 8899999999987

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.85  E-value=6.4e-21  Score=113.77  Aligned_cols=106  Identities=22%  Similarity=0.291  Sum_probs=83.3

Q ss_pred             CCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            2 KLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         2 e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      .|-..|+|.+.+.    ++..+++.++..++.+++.|++++|+..  ..|||+||.||++..   .....+.|||.+...
T Consensus       103 Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~---~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  103 PYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD---SGLPVLMDLGSATQA  179 (302)
T ss_pred             ehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC---CCceEEEeccCcccc
Confidence            4556789999885    2347999999999999999999999998  999999999999953   455899999987654


Q ss_pred             CCcc----c------cccccccccccccccccc----cCCCccceeecC
Q 033837           76 RPRE----Q------FNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~----~------~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                      ....    .      ......|..|+|||.+..    ..+.++|+||||
T Consensus       180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLG  228 (302)
T KOG2345|consen  180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLG  228 (302)
T ss_pred             ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhh
Confidence            2111    0      112356889999999862    367899999998

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.84  E-value=2.7e-21  Score=122.04  Aligned_cols=105  Identities=28%  Similarity=0.507  Sum_probs=83.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. +++.+.+ ....+++..+..++.|++.|+.+||+.+++|+||+|+||+++.   ...++++|||++........
T Consensus        87 ~e~~~-~~l~~~~-~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~---~~~~kl~dfg~~~~~~~~~~  161 (336)
T cd07849          87 QELME-TDLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---NCDLKICDFGLARIADPEHD  161 (336)
T ss_pred             ehhcc-cCHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC---CCCEEECcccceeecccccc
Confidence            46776 4777766 4457999999999999999999999999999999999999953   44599999998876533211


Q ss_pred             ----ccccccccccccccccc--ccCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                          .....+++.|+|||.+.  ..++.++|+||+|
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG  197 (336)
T cd07849         162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVG  197 (336)
T ss_pred             ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHH
Confidence                12246788899999875  3478899999987

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.84  E-value=3.6e-21  Score=120.11  Aligned_cols=106  Identities=25%  Similarity=0.468  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ +|.+++.. ...+++.++..++.|++.|+.|+|+.+++|+||+|+||+++.   ...++++|||.+.......
T Consensus        87 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~kL~dfg~~~~~~~~~  162 (309)
T cd07845          87 MEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD---KGCLKIADFGLARTYGLPA  162 (309)
T ss_pred             EecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECccceeeecCCcc
Confidence            578864 78887765 367899999999999999999999999999999999999954   3459999999887664332


Q ss_pred             c-cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . .....+++.|++||.+.+  .++.++|+||+|
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG  196 (309)
T cd07845         163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVG  196 (309)
T ss_pred             CCCCcccccccccChhhhcCCCCcCchHHHHHHH
Confidence            1 122344677999998863  378899999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.84  E-value=3e-22  Score=120.76  Aligned_cols=93  Identities=24%  Similarity=0.354  Sum_probs=78.9

Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccccccccccccccc
Q 033837           15 AKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMAL   93 (110)
Q Consensus        15 ~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~p   93 (110)
                      ++..++|.-+-.++.-.+.|+.||-. ..|||||+||+||++++.   +.+|++|||.+-.+..+.......|..+|+||
T Consensus       160 q~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~---G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAP  236 (361)
T KOG1006|consen  160 QKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH---GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAP  236 (361)
T ss_pred             HhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecC---CCEeeecccchHhHHHHHHhhhccCCccccCh
Confidence            45679999998888888999999986 489999999999999654   45999999999887766655566788899999


Q ss_pred             cccc--cc-CCCccceeecC
Q 033837           94 EVLK--RN-YGPEVDVWSML  110 (110)
Q Consensus        94 e~~~--~~-~~~~~d~wslg  110 (110)
                      |.+.  .. |+.++|+||||
T Consensus       237 ERi~p~~~gyDiRSDvWSLG  256 (361)
T KOG1006|consen  237 ERIDPSDKGYDIRSDVWSLG  256 (361)
T ss_pred             hccCCccCCcchhhhhhhhc
Confidence            9996  33 89999999998

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.84  E-value=4.2e-21  Score=117.91  Aligned_cols=107  Identities=27%  Similarity=0.545  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.+||+.+++|+|++|+||+++.   ...++++|||.+........
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~---~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK---DMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEecCCccccccCCccc
Confidence            689999999999988888999999999999999999999999999999999999954   34589999998766533221


Q ss_pred             ---------------------cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ---------------------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ---------------------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                           .....++..|++||.... .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG  209 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALG  209 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHH
Confidence                                 112345677999998874 478899999987

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.84  E-value=3.3e-21  Score=121.52  Aligned_cols=106  Identities=29%  Similarity=0.400  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. |+|.+++.....+++..+..++.|++.|+.++|+.+++|+||+|.||+++.   ...++++|||.+....... 
T Consensus        99 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~---~~~~kl~dfg~~~~~~~~~~  174 (335)
T PTZ00024         99 MDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS---KGICKIADFGLARRYGYPPY  174 (335)
T ss_pred             Eeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECC---CCCEEECCccceeecccccc
Confidence            68886 599999988788999999999999999999999999999999999999954   3458999999886654110 


Q ss_pred             --------------ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 --------------QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 --------------~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                                    ......+++.|++||.+.+  .++.++|+||+|
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  221 (335)
T PTZ00024        175 SDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVG  221 (335)
T ss_pred             cccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHH
Confidence                          1112345678999998864  368899999987

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=5.3e-21  Score=120.71  Aligned_cols=105  Identities=28%  Similarity=0.443  Sum_probs=85.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. ++|..++.++ .+.+..+..++.|++.|+.+||+.+++|+|++|+||+++.   ...++++|||.+....... 
T Consensus        88 ~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~---~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          88 FEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             ecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEEeeccchhccccccc
Confidence            57887 4888888665 7888999999999999999999999999999999999954   4459999999887653321 


Q ss_pred             -----ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                           ......++..|++||.+.+  .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG  200 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG  200 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHH
Confidence                 1223467888999998753  378899999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.84  E-value=1.5e-21  Score=128.78  Aligned_cols=107  Identities=23%  Similarity=0.392  Sum_probs=92.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||.++-|+|..++..+ ..++...+.-++.|+..|+.|||+.+.+||||..+||++.   ....||++|||+++.+.+..
T Consensus       469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYLEDDA  545 (974)
T ss_pred             EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhccccc
Confidence            7999999999999865 6788999999999999999999999999999999999994   44569999999999987765


Q ss_pred             cccccccc--cccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGS--LYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~--~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      -.....+.  ..|++||.+. ++++.++|+|-||
T Consensus       546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFg  579 (974)
T KOG4257|consen  546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFG  579 (974)
T ss_pred             hhhccccccceeecCccccchhcccchhhHHHHH
Confidence            54443333  3599999998 7799999999886

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.84  E-value=3.7e-21  Score=120.11  Aligned_cols=109  Identities=24%  Similarity=0.411  Sum_probs=84.4

Q ss_pred             CCCcCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK-----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~   74 (110)
                      |||+++ ++.+.+...     ..+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.++ ....++++|||.+..
T Consensus        83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~  161 (316)
T cd07842          83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL  161 (316)
T ss_pred             EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence            578875 677666421     3688999999999999999999999999999999999996511 256799999998876


Q ss_pred             cCCccc----cccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPREQ----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......    .....++..|+|||.+.+  .++.++|+||||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  203 (316)
T cd07842         162 FNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG  203 (316)
T ss_pred             cCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence            533221    123456788999998763  378899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.8e-21  Score=116.89  Aligned_cols=106  Identities=25%  Similarity=0.530  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |++|+. ||+..+... .++....+..++.++.+|+.|+|++.|+|||+|+.|++++.   ...++++|||.++.+....
T Consensus       103 f~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~---dgilklADFGlar~fs~~~  178 (376)
T KOG0669|consen  103 FDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK---DGILKLADFGLARAFSTSK  178 (376)
T ss_pred             HHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC---CceEEeeccccccceeccc
Confidence            356665 888888654 78999999999999999999999999999999999999954   4569999999987664332


Q ss_pred             c-----cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .     ..-..-|.+|++||.+.+  .|+++.|+|..|
T Consensus       179 n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAg  216 (376)
T KOG0669|consen  179 NVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAG  216 (376)
T ss_pred             ccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHH
Confidence            2     222455899999999874  599999999754

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.84  E-value=1.3e-20  Score=115.84  Aligned_cols=106  Identities=29%  Similarity=0.558  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++ ++|.+++.+. ..+++..+..++.+++.++.++|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        77 ~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~---~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          77 FEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             ecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC---CCCEEEecCCcccccCCCc
Confidence            57887 5899999776 67999999999999999999999999999999999999954   4559999999887654322


Q ss_pred             -cccccccccccccccccc-c-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                       ......++..|++||.+. . .++.++|+||||
T Consensus       153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG  186 (282)
T cd07829         153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVG  186 (282)
T ss_pred             cccCccccCcCcCChHHhcCCcCCCccccHHHHH
Confidence             222334567799999886 3 478899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.84  E-value=6.6e-21  Score=117.38  Aligned_cols=106  Identities=32%  Similarity=0.548  Sum_probs=85.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ +|.+++... ..+++..+..++.|++.|+.++|+.+++|+|++|.||+++.   ...++++|||.+.......
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~---~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN---DGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC---CCCEEEccccceeeccCCC
Confidence            578874 888888665 67999999999999999999999999999999999999954   4459999999887664432


Q ss_pred             --ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                        ......++..|++||.+.+  .++.++|+||||
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG  189 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVG  189 (287)
T ss_pred             cccccccccccccCCceeeEccccCChHHHHHHHH
Confidence              1222355778999998763  378899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=7.2e-21  Score=117.72  Aligned_cols=106  Identities=27%  Similarity=0.485  Sum_probs=86.0

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++..    ...+++..+..++.|++.++.|+|+.+++|+|++|+||+++.   ...++++|||.+....
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~~  156 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR---KGQVKLCDFGVSGELV  156 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec---CCeEEEeecccccccc
Confidence            689999999887643    356889999999999999999999999999999999999954   3459999999876543


Q ss_pred             Cccccccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... ....++..|++||.+.+ .++.++|+||+|
T Consensus       157 ~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG  190 (287)
T cd06621         157 NSLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLG  190 (287)
T ss_pred             cccc-ccccCCccccCHHHhcCCCCCchhhHHHHH
Confidence            3221 22345778999998874 588899999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.84  E-value=9.5e-21  Score=116.77  Aligned_cols=106  Identities=26%  Similarity=0.474  Sum_probs=85.1

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||++ ++|.+++....  .+++..+..++.|++.|+.++|+++++|+|++|+||+++.   ...++++|||.+......
T Consensus        77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~  152 (283)
T cd07835          77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVP  152 (283)
T ss_pred             EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEEEeecccccccCCC
Confidence            57885 68999887654  7899999999999999999999999999999999999954   456999999988654322


Q ss_pred             c-ccccccccccccccccccc--cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . ......+++.|++||.+.+  .++.++|+||||
T Consensus       153 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG  187 (283)
T cd07835         153 VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIG  187 (283)
T ss_pred             ccccCccccccCCCCCceeecCcccCcHHHHHHHH
Confidence            1 1122345778999998863  368899999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.83  E-value=1.9e-20  Score=116.80  Aligned_cols=103  Identities=32%  Similarity=0.525  Sum_probs=83.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. |++.+.+.. ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+...... 
T Consensus        94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~---~~~~kL~dfg~~~~~~~~-  168 (307)
T cd06607          94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE---PGTVKLADFGSASLVSPA-  168 (307)
T ss_pred             HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC---CCCEEEeecCcceecCCC-
Confidence            57776 577776653 467899999999999999999999999999999999999953   445999999987654332 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        ....+++.|++||.+.    +.++.++|+||||
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G  201 (307)
T cd06607         169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  201 (307)
T ss_pred             --CCccCCccccCceeeeccCCCCCCcccchHHHH
Confidence              2335677899999873    3478899999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.83  E-value=1.5e-20  Score=116.49  Aligned_cols=107  Identities=29%  Similarity=0.500  Sum_probs=83.7

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||++ +++.+.+....  .+++..+..++.|++.|+.|+|+++++|+|++|+||+++..+  ..++++|||.+......
T Consensus        80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~--~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIP  156 (294)
T ss_pred             Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC--CEEEEcccccccccCCC
Confidence            68886 58888776543  367888999999999999999999999999999999996432  35899999988654332


Q ss_pred             c-ccccccccccccccccccc--cCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      . ......+++.|++||.+.+  .++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG  191 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVG  191 (294)
T ss_pred             ccccccCceeecccCHHHHhCCCCCCcHHHHHHHH
Confidence            1 1223456788999998864  378899999987

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.83  E-value=9.3e-21  Score=115.21  Aligned_cols=108  Identities=23%  Similarity=0.462  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      +||+++++|.+++...  ..+++..+..++.+++.|+.|+|+++++|+|++|+||+++.++  ..++++|||.+......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG--MVAKLGDFGIARQLNDS  155 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC--CeEEecccccchhccCC
Confidence            5899999999998754  3578999999999999999999999999999999999996432  34799999987665432


Q ss_pred             cc-cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. .....+++.|++||.... .++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG  189 (257)
T cd08225         156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLG  189 (257)
T ss_pred             cccccccCCCccccCHHHHcCCCCCchhhHHHHH
Confidence            22 122356788999998874 488899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=9.1e-21  Score=127.42  Aligned_cols=107  Identities=23%  Similarity=0.363  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      +|||..|+|.+++....                .++...+..++.||+.|++||++..++|||+..+||++.   ....+
T Consensus       381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~---~~~~~  457 (609)
T KOG0200|consen  381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT---KNKVI  457 (609)
T ss_pred             EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---CCCEE
Confidence            48999999999997654                388899999999999999999999999999999999995   34569


Q ss_pred             EEeecccceecCCcccccc--ccc--cccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNE--LVG--SLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~--~~~--~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |++|||+++..........  ..+  ...|+|||.+.. .|+.++|+||||
T Consensus       458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfG  508 (609)
T KOG0200|consen  458 KIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFG  508 (609)
T ss_pred             EEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHH
Confidence            9999999986555443321  122  224999999985 599999999998

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.83  E-value=1e-20  Score=116.99  Aligned_cols=92  Identities=25%  Similarity=0.374  Sum_probs=74.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccccc
Q 033837           16 KGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALE   94 (110)
Q Consensus        16 ~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe   94 (110)
                      ...+++..+..++.+++.|+.|+|+. +++|+|++|+||+++.   ...++++|||++.............+++.|++||
T Consensus       101 ~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  177 (288)
T cd06616         101 KSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR---NGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE  177 (288)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc---CCcEEEeecchhHHhccCCccccccCccCccCHH
Confidence            36799999999999999999999974 9999999999999954   3459999999886654332223345778899999


Q ss_pred             cccc----cCCCccceeecC
Q 033837           95 VLKR----NYGPEVDVWSML  110 (110)
Q Consensus        95 ~~~~----~~~~~~d~wslg  110 (110)
                      .+.+    .++.++|+||+|
T Consensus       178 ~~~~~~~~~~~~~~Di~slG  197 (288)
T cd06616         178 RIDPSARDGYDVRSDVWSLG  197 (288)
T ss_pred             HhccccccCCcchhhhhHHH
Confidence            9863    378899999987

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.83  E-value=1.3e-20  Score=114.91  Aligned_cols=106  Identities=27%  Similarity=0.456  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+.+.+    ...+++.++..++.|++.|+.++|+.+++|+|++|+|++++.    ..++++|||.+....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~----~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN----NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec----CCEeecccCceeecC
Confidence            588999999988753    356899999999999999999999999999999999999953    238999999887654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....+++.|++||...+ .++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG  192 (260)
T cd08222         157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLG  192 (260)
T ss_pred             CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHH
Confidence            3322 223456788999998864 478889999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.83  E-value=1.3e-20  Score=116.20  Aligned_cols=106  Identities=26%  Similarity=0.470  Sum_probs=84.4

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. ++|.+++..  ...+++.++..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~---~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVP  153 (284)
T ss_pred             eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEeeccchhhcccC
Confidence            68886 588888864  356899999999999999999999999999999999999954   345999999987655332


Q ss_pred             cc-cccccccccccccccccc-c-CCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                      .. .....+++.|++||.+.+ . ++.++|+||||
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  188 (284)
T cd07860         154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG  188 (284)
T ss_pred             ccccccccccccccCCeEEecCCCCCcHHHHHHHH
Confidence            21 222345778999998864 3 57889999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.83  E-value=8.8e-21  Score=118.12  Aligned_cols=106  Identities=25%  Similarity=0.395  Sum_probs=82.4

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ ++...+.. ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+.......
T Consensus        94 ~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~  169 (311)
T cd07866          94 TPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFGLARPYDGPP  169 (311)
T ss_pred             EecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECcCccchhccCCC
Confidence            466654 67776654 457999999999999999999999999999999999999954   4459999999886543221


Q ss_pred             c------------cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q------------FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~------------~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .            .....+++.|+|||.+.+  .++.++|+||+|
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  214 (311)
T cd07866         170 PNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIG  214 (311)
T ss_pred             cccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHH
Confidence            1            111245677999998763  378899999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.83  E-value=1.2e-20  Score=116.24  Aligned_cols=106  Identities=26%  Similarity=0.501  Sum_probs=84.5

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++ ++.+++...   ..+++.++..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+.....
T Consensus        77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~---~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK---RGELKLADFGLARAFGI  152 (284)
T ss_pred             EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC---CCcEEEeecchhhhhcC
Confidence            588875 888887643   46899999999999999999999999999999999999953   44599999998865433


Q ss_pred             cc-ccccccccccccccccccc--cCCCccceeecC
Q 033837           78 RE-QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~-~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .. ......+++.|++||.+.+  .++.++|+||+|
T Consensus       153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG  188 (284)
T cd07836         153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVG  188 (284)
T ss_pred             CccccccccccccccChHHhcCCCCCCcHHHHHHHH
Confidence            21 1123456778999998864  368899999987

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.83  E-value=1.2e-20  Score=119.43  Aligned_cols=106  Identities=25%  Similarity=0.445  Sum_probs=83.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++ ++|.+.+. .+.+++..+..++.|++.|+.|||+.+++|+|++|+||+++.+  ...++++|||.+..+.....
T Consensus        95 ~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~--~~~~kl~dfg~~~~~~~~~~  170 (342)
T cd07854          95 QEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE--DLVLKIGDFGLARIVDPHYS  170 (342)
T ss_pred             eeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC--CceEEECCcccceecCCccc
Confidence            57886 48887764 4578999999999999999999999999999999999999532  34589999998866532211


Q ss_pred             ----cccccccccccccccccc--cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                          .....++..|+|||.+.+  .++.++|+||||
T Consensus       171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlG  206 (342)
T cd07854         171 HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG  206 (342)
T ss_pred             cccccccccccccccCHHHHhCccccCchhhHHHHH
Confidence                112346778999998753  378899999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.83  E-value=1.4e-20  Score=115.95  Aligned_cols=106  Identities=25%  Similarity=0.475  Sum_probs=86.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++. ...+++..+..++.+++.++.++|+.+++|+|++|.||+++.   ...++++|||.+........
T Consensus        81 ~e~~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~---~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          81 MEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC---CCCEEEeecccceecccchh
Confidence            68999999998875 356889999999999999999999999999999999999953   34599999998766543221


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.. .++.++|+||+|
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG  188 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG  188 (277)
T ss_pred             hhccccCCccccChhhhccCCCCchhhHHHHH
Confidence             223456778999999874 478899999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.83  E-value=1.5e-20  Score=115.68  Aligned_cols=106  Identities=27%  Similarity=0.524  Sum_probs=86.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ ++.+.+... ..+++.++..++.|++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+.......
T Consensus        77 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          77 FEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT---EGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             EeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC---CCcEEEeeeeeeEecCCCc
Confidence            578875 888887653 68999999999999999999999999999999999999953   3459999999887664432


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......++..|++||.+.+  .++.++|+||+|
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG  186 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVG  186 (283)
T ss_pred             ccccCccCcccccCcHHHhcCCCCCchhHHHHHH
Confidence             1222456778999998863  478899999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.1e-20  Score=118.44  Aligned_cols=99  Identities=23%  Similarity=0.435  Sum_probs=80.3

Q ss_pred             CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccccccc
Q 033837            6 EGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELV   85 (110)
Q Consensus         6 ~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~   85 (110)
                      +++|.+.+. ...+++..+..++.|++.|+.|+|+++++|+|++|+||+++.   ...++++|||.+......  .....
T Consensus       105 ~~~L~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kl~dfg~~~~~~~~--~~~~~  178 (345)
T cd07877         105 GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLARHTDDE--MTGYV  178 (345)
T ss_pred             ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC---CCCEEEeccccccccccc--ccccc
Confidence            678877664 346899999999999999999999999999999999999954   345999999987654322  22346


Q ss_pred             ccccccccccccc--cCCCccceeecC
Q 033837           86 GSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        86 ~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ++..|+|||.+.+  .++.++|+||+|
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~DvwslG  205 (345)
T cd07877         179 ATRWYRAPEIMLNWMHYNQTVDIWSVG  205 (345)
T ss_pred             cCCCccCHHHHhCccCCCchhhHHHHH
Confidence            6788999998764  478899999987

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.82  E-value=1.5e-20  Score=118.29  Aligned_cols=107  Identities=13%  Similarity=0.188  Sum_probs=81.8

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+.++++.+++.+.  ..+++..+..++.|++.|+.|+|+++++|||++|+||++..+   ..+++.||+........
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~---~~~~~~~~~~~~~~~~~  154 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD---GLVSLSGLSHLYSLVRN  154 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC---CcEEEechHHHhhhhcc
Confidence            5889999999988754  458899999999999999999999999999999999999643   35899998754322111


Q ss_pred             cc----c----ccccccccccccccccc---cCCCccceeecC
Q 033837           79 EQ----F----NELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~----~----~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ..    .    ....++..|++||.+.+   .++.++|+||+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG  197 (328)
T cd08226         155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG  197 (328)
T ss_pred             CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence            00    0    01123456999999864   267899999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.82  E-value=1.8e-20  Score=116.48  Aligned_cols=106  Identities=30%  Similarity=0.585  Sum_probs=83.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ ++.+.+... ..+++.++..++.|++.|+.|||+.+++|+|++|.||+++.   ...++++|||.+.......
T Consensus        95 ~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~---~~~~kl~dfg~~~~~~~~~  170 (302)
T cd07864          95 FEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN---KGQIKLADFGLARLYNSEE  170 (302)
T ss_pred             EcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCcEEeCcccccccccCCc
Confidence            578875 777777654 57999999999999999999999999999999999999953   4569999999887654322


Q ss_pred             c--cccccccccccccccccc--cCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .  .....++..|++||.+.+  .++.++|+||+|
T Consensus       171 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG  205 (302)
T cd07864         171 SRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG  205 (302)
T ss_pred             ccccccceeccCccChHHhcCCCCCCchhHHHHHH
Confidence            1  112244667999998753  368899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.82  E-value=4.2e-20  Score=115.86  Aligned_cols=103  Identities=31%  Similarity=0.503  Sum_probs=83.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ ++.+.+.. ..++++.++..++.+++.|+.|||+++++|+|++|+||+++.   ...++++|||.+...... 
T Consensus       104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~---~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE---PGQVKLADFGSASIASPA-  178 (317)
T ss_pred             EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC---CCCEEEecCCCccccCCc-
Confidence            688874 78777754 567899999999999999999999999999999999999954   345999999987654322 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        ....+++.|++||.+.    +.++.++|+||+|
T Consensus       179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slG  211 (317)
T cd06635         179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  211 (317)
T ss_pred             --ccccCCccccChhhhhcCCCCCCCccccHHHHH
Confidence              2345678899999873    3478899999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.82  E-value=3.6e-21  Score=127.16  Aligned_cols=107  Identities=27%  Similarity=0.483  Sum_probs=94.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.+|+|.+.-.-.+++.+.++...+++.+.++.|+|+++=+|||+|-.||++...+   .+|+.|||.+..++....
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g---DvklaDfgvsaqitati~  167 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG---DVKLADFGVSAQITATIA  167 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC---ceeecccCchhhhhhhhh
Confidence            89999999999887889999999999999999999999999999999999999996444   499999999888765433


Q ss_pred             -ccccccccccccccccc----ccCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                       .....||++|+|||+-.    +.|...+|+|++|
T Consensus       168 KrksfiGtpywmapEvaaverkggynqlcdiwa~g  202 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG  202 (829)
T ss_pred             hhhcccCCccccchhHHHHHhcccccccccccccc
Confidence             34579999999999874    4588999999987

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.1e-20  Score=118.39  Aligned_cols=103  Identities=24%  Similarity=0.455  Sum_probs=83.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+ +++|.+++.. .++++..+..++.|++.|+.++|+.+++|+|++|+||+++.   ...++++|||.+......  
T Consensus        99 ~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~---~~~~kL~dfg~~~~~~~~--  171 (343)
T cd07851          99 THLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFGLARHTDDE--  171 (343)
T ss_pred             EecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEcccccccccccc--
Confidence            4566 5688887754 57999999999999999999999999999999999999954   445999999988665332  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....++..|++||.+.+  .++.++|+||+|
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG  203 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG  203 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHH
Confidence            223456778999998863  467899999987

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.2e-20  Score=112.42  Aligned_cols=106  Identities=22%  Similarity=0.378  Sum_probs=82.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++.|||.+-+.. ..+.|...+.++.|+++|+.|||+.+++|||||.+||++...+ ...+|++|||.++.....- 
T Consensus       101 qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~g~tV-  177 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKVGTTV-  177 (378)
T ss_pred             eccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccccCcee-
Confidence            699999999987643 4577888999999999999999999999999999999997544 3479999999876543321 


Q ss_pred             ccccccccccccccccc----cc--CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK----RN--YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~----~~--~~~~~d~wslg  110 (110)
                       ...-....|.+||.+.    +.  ..+..|+|.||
T Consensus       178 -~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfG  212 (378)
T KOG1345|consen  178 -KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFG  212 (378)
T ss_pred             -hhhhhhcccCCcHHHhhccccceEecccccchhee
Confidence             1222344577888763    22  57889999998

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.3e-20  Score=125.62  Aligned_cols=107  Identities=23%  Similarity=0.388  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||+++.|+|.+.|.+  +..|.-..+-.|+.||+.|+.||.+++++||||..+|+++...+   .|||+|||+.+.+...
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr---tVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR---TVKICDFGLMRALGEN  265 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc---eeeeecccceeccCCC
Confidence            689999999999976  35688899999999999999999999999999999999996533   4999999999888654


Q ss_pred             ccccccc---c-ccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELV---G-SLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~---~-~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......   . ...|.|||.+. +.|+.++|+|++|
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyG  302 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYG  302 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhccccccccchhhhhh
Confidence            4332211   1 23499999998 7799999999997

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.82  E-value=4.9e-20  Score=106.87  Aligned_cols=89  Identities=24%  Similarity=0.270  Sum_probs=73.3

Q ss_pred             CCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccccccc
Q 033837            7 GELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELV   85 (110)
Q Consensus         7 g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~   85 (110)
                      |+|.+++.. +..+++.++..++.|++.|+.|+|+++      ||.||+++.   ...+++  ||.+.......    ..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~---~~~~~~--fG~~~~~~~~~----~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW---DGLLKL--DGSVAFKTPEQ----SR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC---ccceee--ccceEeecccc----CC
Confidence            689999976 456999999999999999999999998      999999943   344676  99876653321    25


Q ss_pred             ccccccccccccc-cCCCccceeecC
Q 033837           86 GSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        86 ~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++.|+|||++.+ .++.++|+||||
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG   91 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLG   91 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHH
Confidence            7889999999974 589999999997

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.6e-20  Score=117.98  Aligned_cols=103  Identities=24%  Similarity=0.416  Sum_probs=82.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +++|.+++. ...+++..+..++.|++.|+.|+|+.+++|+|++|.||+++.   ...++++|||.+......  
T Consensus        99 ~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~---~~~~kl~dfg~~~~~~~~--  171 (343)
T cd07880          99 MPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLARQTDSE--  171 (343)
T ss_pred             EecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeecccccccccC--
Confidence            4666 568877664 457899999999999999999999999999999999999954   345999999988654322  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.+  .++.++|+||+|
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  203 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVG  203 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHH
Confidence            123356778999998864  378899999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.82  E-value=3.4e-20  Score=115.18  Aligned_cols=106  Identities=29%  Similarity=0.426  Sum_probs=82.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. +++.+.... ...+++..+..++.+++.++.|||+ .+++|+|++|+||+++.   ...++++|||.+..+...
T Consensus        93 ~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~---~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          93 MELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA---SGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             eeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC---CCCEEECccccchhccCC
Confidence            56764 467776654 4678999999999999999999997 59999999999999953   446999999988665433


Q ss_pred             ccccccccccccccccccccc-----CCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRN-----YGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~-----~~~~~d~wslg  110 (110)
                      .......+++.|++||.+.+.     ++.++|+||||
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG  205 (296)
T cd06618         169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLG  205 (296)
T ss_pred             CcccCCCCCccccCHhhcCCCCCccccccchhHHHHH
Confidence            222233567789999988632     67899999987

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.82  E-value=6.1e-20  Score=114.96  Aligned_cols=103  Identities=32%  Similarity=0.506  Sum_probs=82.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. |++.+.+.. ..++++.++..++.|++.++.|||+++++|+|++|+||+++.   ...++++|||.+.....  
T Consensus       100 ~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~---~~~~kL~dfg~~~~~~~--  173 (313)
T cd06633         100 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE---PGQVKLADFGSASKSSP--  173 (313)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC---CCCEEEeecCCCcccCC--
Confidence            57886 577777754 467899999999999999999999999999999999999954   34599999997754322  


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                       .....++..|++||.+.    +.++.++|+||||
T Consensus       174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slG  207 (313)
T cd06633         174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  207 (313)
T ss_pred             -CCCccccccccChhhccccCCCCCCchhhHHHHH
Confidence             12345778899999873    3478899999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.81  E-value=1.2e-19  Score=123.32  Aligned_cols=107  Identities=21%  Similarity=0.286  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+.+++|.+++...+.+.+..+..++.||+.||.|||+++|+|+||+|+||+++.   ...++|+|||+++...... 
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFGls~~~~~~~~  159 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN---EGHIKLTDFGLSKVTLNREL  159 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC---CCCEEEEeCCCCccccCCcc
Confidence            689999999999987788999999999999999999999999999999999999954   3459999999987654332 


Q ss_pred             ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                      ......+++.|.+||.... . -...+++|++|
T Consensus       160 ~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g  192 (669)
T cd05610         160 NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLG  192 (669)
T ss_pred             cccccccCccccCccccccCCCCceeeeeeecC
Confidence            2234567888999986642 1 23345666665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.81  E-value=5.6e-20  Score=114.89  Aligned_cols=103  Identities=33%  Similarity=0.515  Sum_probs=83.2

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. |++.+.+.. ..++++.++..++.+++.++.|+|+++++|+||+|.||+++.   ...++++|||.+...... 
T Consensus        94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC---CCcEEECCcccceeecCc-
Confidence            57886 578777654 456899999999999999999999999999999999999954   345999999987654332 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        ....+++.|++||.+.    +.++.++|+||||
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG  201 (308)
T cd06634         169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  201 (308)
T ss_pred             --ccccCCccccCHHHHhhcccCCCCcccchHHHH
Confidence              2235677899999874    3477899999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=7.1e-20  Score=122.61  Aligned_cols=106  Identities=34%  Similarity=0.536  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      ||||++ ||+..+...+.+....+-.++.|++.|+.|+|+.|+.|||+|++|+++...+   .+|++|||.+......  
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g---~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG---ILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC---ceEEeecCcceeeccCcc
Confidence            899999 9999998888899999999999999999999999999999999999996543   5999999987654321  


Q ss_pred             ---cccccccccccccccccccc-cCC-CccceeecC
Q 033837           79 ---EQFNELVGSLYYMALEVLKR-NYG-PEVDVWSML  110 (110)
Q Consensus        79 ---~~~~~~~~~~~~~~pe~~~~-~~~-~~~d~wslg  110 (110)
                         ......+|+..|+|||.+.+ .|. ...|+||.|
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~  512 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCG  512 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhcc
Confidence               22345688999999999975 465 469999975

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.81  E-value=8.6e-20  Score=109.57  Aligned_cols=107  Identities=36%  Similarity=0.645  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      +||+++++|.+++.....++..++..++.+++.++.++|+.+++|+|++|.||+++.+   ..++++|||.+........
T Consensus        66 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~---~~~~l~d~~~~~~~~~~~~  142 (244)
T smart00220       66 MEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED---GHVKLADFGLARQLDPGGL  142 (244)
T ss_pred             EeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC---CcEEEccccceeeeccccc
Confidence            5788888999998776668999999999999999999999999999999999999543   4699999998877654433


Q ss_pred             ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .....++..|++||... ..++.++|+|++|
T Consensus       143 ~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG  173 (244)
T smart00220      143 LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLG  173 (244)
T ss_pred             cccccCCcCCCCHHHHccCCCCchhhHHHHH
Confidence            34456677899999887 4578899999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.81  E-value=1.4e-19  Score=119.16  Aligned_cols=94  Identities=27%  Similarity=0.366  Sum_probs=71.8

Q ss_pred             CCCcCCCCHHHHHHhC-C-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK-G-----------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV   56 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~-----------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~   56 (110)
                      |||+++++|.+++... +                       .+....+..++.|++.++.|+|+.+++|||++|.||+++
T Consensus       264 ~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~  343 (507)
T PLN03224        264 WKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT  343 (507)
T ss_pred             EEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC
Confidence            5889999999888532 1                       234567888999999999999999999999999999995


Q ss_pred             eCCCCceEEEeecccceecCCcccccc--cccccccccccccc
Q 033837           57 NKKKSFSLKAIDFGLSVFFRPREQFNE--LVGSLYYMALEVLK   97 (110)
Q Consensus        57 ~~~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~~~pe~~~   97 (110)
                      .   ...++++|||++...........  ...++.|++||.+.
T Consensus       344 ~---~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        344 V---DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             C---CCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence            4   34599999998865533222222  23367899999874

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=7.4e-20  Score=116.37  Aligned_cols=106  Identities=27%  Similarity=0.332  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-----c---CCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-----H---GVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-----~---~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      .||-+.|+|+|+|.. ..++......++..+++||.+||.     +   .|.|||||..||++   ..+..+-|+|+|++
T Consensus       288 TdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IADLGLA  363 (513)
T KOG2052|consen  288 TDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA  363 (513)
T ss_pred             eecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEEeeceee
Confidence            378899999999976 778889999999999999999994     2   38999999999999   44556899999998


Q ss_pred             eecCCc-----ccccccccccccccccccccc-----CC--CccceeecC
Q 033837           73 VFFRPR-----EQFNELVGSLYYMALEVLKRN-----YG--PEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~-----~~~~~~~~~~~~~~pe~~~~~-----~~--~~~d~wslg  110 (110)
                      ......     ...+..+||..|||||++...     |.  ..+|+||||
T Consensus       364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg  413 (513)
T KOG2052|consen  364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG  413 (513)
T ss_pred             EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence            776432     224567999999999999632     32  369999987

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.80  E-value=1.4e-19  Score=114.60  Aligned_cols=101  Identities=24%  Similarity=0.418  Sum_probs=78.8

Q ss_pred             CCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc
Q 033837            2 KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF   81 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~   81 (110)
                      ||+.. ++.+..  ...+++..+..++.|++.|+.|+|+.+++|+|++|+||+++.   ...++++|||.+......  .
T Consensus       100 e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~---~~~~kL~dfg~~~~~~~~--~  171 (342)
T cd07879         100 PYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE---DCELKILDFGLARHADAE--M  171 (342)
T ss_pred             ccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCCCCcCCCCC--C
Confidence            45542 555443  346899999999999999999999999999999999999954   456999999987654221  1


Q ss_pred             ccccccccccccccccc--cCCCccceeecC
Q 033837           82 NELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        82 ~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ....+++.|++||.+.+  .++.++|+||||
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  202 (342)
T cd07879         172 TGYVVTRWYRAPEVILNWMHYNQTVDIWSVG  202 (342)
T ss_pred             CCceeeecccChhhhcCccccCchHHHHHHH
Confidence            23456778999999864  378899999987

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.80  E-value=1.4e-19  Score=114.14  Aligned_cols=103  Identities=29%  Similarity=0.492  Sum_probs=81.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +++|.+.+. ..++++..+..++.|++.|+.++|+++++|+|++|+|++++.   ...++++|||.+......  
T Consensus        89 ~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~---~~~~~l~dfg~~~~~~~~--  161 (328)
T cd07856          89 TELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE---NCDLKICDFGLARIQDPQ--  161 (328)
T ss_pred             eehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC---CCCEEeCccccccccCCC--
Confidence            5777 458877664 456888889999999999999999999999999999999953   445999999987654221  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|++||.+.+  .++.++|+||+|
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  193 (328)
T cd07856         162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAG  193 (328)
T ss_pred             cCCCcccccccCceeeeccCCcCcHHHHHHHH
Confidence            123456778999998763  478899999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=2.4e-19  Score=121.20  Aligned_cols=107  Identities=25%  Similarity=0.423  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ++|++.|.|.++++. +..+-......|..||++|+.|||.++++||||..+|+++...+   .+|+.|||+++.+....
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~---hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN---HVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC---eEEEEecchhhccCccc
Confidence            368999999999975 47888899999999999999999999999999999999995443   48999999998876544


Q ss_pred             ccccc-cc--ccccccccccc-ccCCCccceeecC
Q 033837           80 QFNEL-VG--SLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~-~~--~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..... .|  .+.|+|-|.+. ..|..++|+||||
T Consensus       853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfG  887 (1177)
T KOG1025|consen  853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFG  887 (1177)
T ss_pred             ccccccccccCcHHHHHHHhhccCCCchhhhhhhh
Confidence            33222 22  34588888876 5699999999998

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.78  E-value=5.3e-19  Score=123.93  Aligned_cols=100  Identities=16%  Similarity=0.176  Sum_probs=77.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH---KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++|+|.+++..   +++.++..++.+++.|+.|+|   +.+++|||++|+||+++.+.   ..++. ++.......
T Consensus       762 ~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~---~~~~~-~~~~~~~~~  834 (968)
T PLN00113        762 HEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD---EPHLR-LSLPGLLCT  834 (968)
T ss_pred             EeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC---ceEEE-ecccccccc
Confidence            799999999999853   788899999999999999999   66899999999999996433   23332 443222111


Q ss_pred             ccccccccccccccccccccc-cCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         .....+++.|+|||++.+ .++.++|+||||
T Consensus       835 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~G  865 (968)
T PLN00113        835 ---DTKCFISSAYVAPETRETKDITEKSDIYGFG  865 (968)
T ss_pred             ---CCCccccccccCcccccCCCCCcccchhhHH
Confidence               112356788999999874 589999999997

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.77  E-value=1.4e-18  Score=103.59  Aligned_cols=107  Identities=36%  Similarity=0.643  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+++++|.+++..... +++..+..++.+++.++.++|+.++.|+|+++.|++++..   ..++++|||.+.......
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~---~~~~l~d~g~~~~~~~~~  152 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD---GLVKLADFGLARFIHRDL  152 (225)
T ss_pred             EeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeeCceeeEecCcc
Confidence            578888899999987665 8999999999999999999999999999999999999543   569999999887764432


Q ss_pred             --ccccccccccccccccc-c-ccCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVL-K-RNYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~-~-~~~~~~~d~wslg  110 (110)
                        ......++..|++||.+ . ..++.++|+|+||
T Consensus       153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG  187 (225)
T smart00221      153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLG  187 (225)
T ss_pred             cccccceeccCCcCCHhHhcCCCCCCchhhHHHHH
Confidence              22334567789999988 4 3467799999987

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.77  E-value=8.4e-19  Score=118.12  Aligned_cols=108  Identities=25%  Similarity=0.304  Sum_probs=81.3

Q ss_pred             CCcCCCCHHHHHHhC-CC--CCH-HHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccceec
Q 033837            2 KLCEEGELVDRIVAK-GH--YTE-RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFF   75 (110)
Q Consensus         2 e~~~~g~l~~~l~~~-~~--~~~-~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~   75 (110)
                      |.|.- +|.+++... ..  ... ...+....|+++|+++||+.+|+||||||+||++.-.+  .....+|+|||+|+.+
T Consensus       583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            55653 788887652 11  111 44577889999999999999999999999999997432  2356899999999988


Q ss_pred             CCcccc----ccccccccccccccccc-cCCCccceeecC
Q 033837           76 RPREQF----NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~----~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......    ....||-+|+|||++.. .-..++|++|+|
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslG  701 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLG  701 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcC
Confidence            654332    23468889999999974 346689999998

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.76  E-value=9.6e-19  Score=112.02  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=84.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---------cCCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK---------HGVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~---------~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      +||-+.|+|.++++. ..+++..+-+++..++.||+|||+         ..|.|||+|..||++..   ....-|+|||+
T Consensus       287 t~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~---DlTccIaDFGL  362 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN---DLTCCIADFGL  362 (534)
T ss_pred             eeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc---CCcEEeeccce
Confidence            467789999999954 567889999999999999999995         24999999999999954   34578999999


Q ss_pred             ceecCCccc---ccccccccccccccccccc--CC-----CccceeecC
Q 033837           72 SVFFRPREQ---FNELVGSLYYMALEVLKRN--YG-----PEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~~---~~~~~~~~~~~~pe~~~~~--~~-----~~~d~wslg  110 (110)
                      +..+.....   .....||..|||||++-+.  +.     .+.||||+|
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg  411 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG  411 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence            988764432   2347899999999999753  33     368999876

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.75  E-value=3.1e-18  Score=111.37  Aligned_cols=100  Identities=24%  Similarity=0.404  Sum_probs=81.1

Q ss_pred             CHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccc
Q 033837            8 ELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL   84 (110)
Q Consensus         8 ~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~   84 (110)
                      .|.+.+++-+   .+....+..|+.|+..||..|-.++++|.||+|+|||+.+.  ...+||+|||.+..... .....+
T Consensus       519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~--k~iLKLCDfGSA~~~~e-neitPY  595 (752)
T KOG0670|consen  519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES--KNILKLCDFGSASFASE-NEITPY  595 (752)
T ss_pred             hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC--cceeeeccCcccccccc-ccccHH
Confidence            5667776544   37778899999999999999999999999999999999643  45689999997755432 223445


Q ss_pred             cccccccccccccc-cCCCccceeecC
Q 033837           85 VGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        85 ~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .-+.+|.|||++.| +|+...|+||.|
T Consensus       596 LVSRFYRaPEIiLG~~yd~~iD~WSvg  622 (752)
T KOG0670|consen  596 LVSRFYRAPEIILGLPYDYPIDTWSVG  622 (752)
T ss_pred             HHHHhccCcceeecCcccCCccceeec
Confidence            66778999999996 599999999987

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.74  E-value=1.3e-17  Score=97.95  Aligned_cols=108  Identities=33%  Similarity=0.593  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+++|.+++... ..++...+..++.+++.++.++|+.+++|+|++|.||+++..  ...++++||+.+.......
T Consensus        70 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~  147 (215)
T cd00180          70 MEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDK  147 (215)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCc
Confidence            5788889999998765 578999999999999999999999999999999999999651  3458999999887654432


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+...|.+||....  .++.+.|+|++|
T Consensus       148 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg  181 (215)
T cd00180         148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLG  181 (215)
T ss_pred             chhhcccCCCCccChhHhcccCCCCchhhhHHHH
Confidence             1122345677999998874  577889999986

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.70  E-value=6.6e-17  Score=102.15  Aligned_cols=105  Identities=21%  Similarity=0.395  Sum_probs=79.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec-----
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-----   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~-----   75 (110)
                      |||.+..+..++...   ++..++..++..+..|+.++|.+||+|||+||.|+++.....  .-.+.|||++...     
T Consensus       114 lp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~--rg~LvDFgLA~~~d~~~~  188 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ--RGVLVDFGLAQRYDGYQQ  188 (418)
T ss_pred             ecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC--CceEEechhHHHHHhhhh
Confidence            577777666666544   567899999999999999999999999999999999964333  3567999987611     


Q ss_pred             ------------CC----------------cc-cc-----------cccccccccccccccc--ccCCCccceeecC
Q 033837           76 ------------RP----------------RE-QF-----------NELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        76 ------------~~----------------~~-~~-----------~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                                  ..                .. ..           ....||++|+|||++.  +..++++|+||.|
T Consensus       189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G  265 (418)
T KOG1167|consen  189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG  265 (418)
T ss_pred             hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence                        00                00 00           0146899999999996  3478899999987

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.70  E-value=6.5e-17  Score=102.99  Aligned_cols=87  Identities=23%  Similarity=0.263  Sum_probs=65.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCC-CCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDL-NPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l-~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||+|++|.. ...   ..   ...++.+++.++.++|+++++|||| ||.||+++.   ...++++|||++..+....
T Consensus        97 mE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~---~~~ikLiDFGlA~~~~~~~  166 (365)
T PRK09188         97 RGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP---DGEAAVIDFQLASVFRRRG  166 (365)
T ss_pred             EEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC---CCCEEEEECccceecccCc
Confidence            79999999963 211   11   1467889999999999999999999 999999953   3459999999988764432


Q ss_pred             cc---------cccccccccccccccc
Q 033837           80 QF---------NELVGSLYYMALEVLK   97 (110)
Q Consensus        80 ~~---------~~~~~~~~~~~pe~~~   97 (110)
                      ..         ....+++.|.+||.+.
T Consensus       167 ~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        167 ALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             chhhhhhhhhhhhhhccCccCCcccCC
Confidence            11         2235667789999885

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.69  E-value=6.6e-17  Score=95.17  Aligned_cols=71  Identities=17%  Similarity=0.274  Sum_probs=60.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVC-HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||++++++.....+.+.++...+..++.|++.++.++ |+.+++|+|++|.||+++.    ..++++|||++...
T Consensus        96 mE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~----~~v~LiDFG~a~~~  167 (190)
T cd05147          96 MEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD----GKLYIIDVSQSVEH  167 (190)
T ss_pred             EEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC----CcEEEEEccccccC
Confidence            79999887776655567899999999999999999999 7999999999999999963    24899999988643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.67  E-value=1.9e-16  Score=97.94  Aligned_cols=108  Identities=30%  Similarity=0.485  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ++++.++++.+.+....   .+.+.....+..|++.++.++|+.+++|||++|+|++++..+.  .+++.|||.+.....
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~--~~~l~dfg~~~~~~~  154 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPD  154 (384)
T ss_pred             EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC--eEEEeccCcceecCC
Confidence            57889999997776654   7999999999999999999999999999999999999954321  589999998875533


Q ss_pred             cc-------ccccccccccccccccccc----cCCCccceeecC
Q 033837           78 RE-------QFNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~-------~~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                      ..       ......++..|++||.+.+    .+....|+||+|
T Consensus       155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g  198 (384)
T COG0515         155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG  198 (384)
T ss_pred             CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHH
Confidence            22       2345678999999999874    477889999876

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.66  E-value=5.4e-16  Score=91.30  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=60.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||++++++........+++...+..++.|++.++.++|+ +|++|+|++|.||+++ +   ..++++|||++.....
T Consensus        96 mE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~---~~~~liDFG~a~~~~~  169 (190)
T cd05145          96 MEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D---GKPYIIDVSQAVELDH  169 (190)
T ss_pred             EEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C---CCEEEEEcccceecCC
Confidence            7899987655543345678888999999999999999999 9999999999999996 2   3489999999876544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.63  E-value=6.1e-17  Score=106.59  Aligned_cols=103  Identities=22%  Similarity=0.324  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ++|..+|++...+.+...+.+.....+...++.+++++|+.++++||+|++||+++.++.   +++.|||.++.......
T Consensus        76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh---i~~tdfglske~v~~~~  152 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH---IKLTDFGLSKEAVKEKI  152 (612)
T ss_pred             hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc---cccCCchhhhHhHhhhh
Confidence            467888999999988899999999999999999999999999999999999999965554   89999998877544322


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                         .+|+..|++||+.++ ....+|+||+|
T Consensus       153 ---~cgt~eymApEI~~g-h~~a~D~ws~g  178 (612)
T KOG0603|consen  153 ---ACGTYEYRAPEIING-HLSAADWWSFG  178 (612)
T ss_pred             ---cccchhhhhhHhhhc-cCCcccchhhh
Confidence               288999999999983 45678999987

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.63  E-value=4.5e-16  Score=98.66  Aligned_cols=104  Identities=22%  Similarity=0.360  Sum_probs=82.9

Q ss_pred             cCCCCHHHHHH-----hC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            4 CEEGELVDRIV-----AK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         4 ~~~g~l~~~l~-----~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      +.-|+|..++.     +.   +.++..+++.++.|++.|++|+|+.+++|.||..+|.++   ++...+|++|-.+++.+
T Consensus       370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkltDsaLSRDL  446 (563)
T KOG1024|consen  370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLTDSALSRDL  446 (563)
T ss_pred             cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEeccchhcccc
Confidence            34578888886     11   347889999999999999999999999999999999999   45577999998888876


Q ss_pred             CCccc--c-cccccccccccccccc-ccCCCccceeecC
Q 033837           76 RPREQ--F-NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~--~-~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      -+..-  . ...-....|+++|.+. ..|+..+|+||||
T Consensus       447 FP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfG  485 (563)
T KOG1024|consen  447 FPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFG  485 (563)
T ss_pred             CcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHH
Confidence            44321  1 1123356799999998 4599999999997

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.61  E-value=3e-15  Score=94.43  Aligned_cols=105  Identities=19%  Similarity=0.313  Sum_probs=81.3

Q ss_pred             CCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccce--ecCCcc
Q 033837            6 EGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSV--FFRPRE   79 (110)
Q Consensus         6 ~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~--~~~~~~   79 (110)
                      |-+|.+.....  +.++..++..++.|++.+|.++|+.|++|||++|.|+++....  ....+.++|||+++  ......
T Consensus       104 G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~  183 (322)
T KOG1164|consen  104 GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDS  183 (322)
T ss_pred             CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCC
Confidence            56888877543  5799999999999999999999999999999999999996432  11468999999998  321111


Q ss_pred             -----c----ccccccccccccccccccc-CCCccceeecC
Q 033837           80 -----Q----FNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        80 -----~----~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                           .    .....||..|.++....+. .+.+.|+||++
T Consensus       184 ~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~  224 (322)
T KOG1164|consen  184 GGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLF  224 (322)
T ss_pred             CcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHH
Confidence                 0    1224588899999988754 78899999963

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.59  E-value=1.3e-16  Score=103.28  Aligned_cols=104  Identities=31%  Similarity=0.558  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |++|.-++|.+++...   ...+......++.|+..+++|   ++.+|+|++|.||++..++   .+|+.|||+......
T Consensus       335 Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~---q~kIgDFgl~ts~~~  408 (516)
T KOG1033|consen  335 MNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDD---QLKIGDFGLVTSQDK  408 (516)
T ss_pred             hhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccch---hhhhhhhhheeeccc
Confidence            6788888999999643   235667788999999999999   9999999999999985433   589999998766543


Q ss_pred             cc-------cccccccccccccccccccc-CCCccceeecC
Q 033837           78 RE-------QFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        78 ~~-------~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ..       ......||+.|++||.+.++ |+.++|+||||
T Consensus       409 ~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLG  449 (516)
T KOG1033|consen  409 DETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALG  449 (516)
T ss_pred             CCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHH
Confidence            32       22346899999999999965 99999999987

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.57  E-value=3.2e-15  Score=89.91  Aligned_cols=87  Identities=21%  Similarity=0.255  Sum_probs=62.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||++|.+|.+..    .+++    ....++..++..+|+.|++|+|++|.|+++++++    ++++|||..........
T Consensus       122 mEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g----i~liDfg~~~~~~e~~a  189 (232)
T PRK10359        122 IEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG----LRIIDLSGKRCTAQRKA  189 (232)
T ss_pred             EEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC----EEEEECCCcccccchhh
Confidence            7999998998763    2333    2456889999999999999999999999996432    89999996644321111


Q ss_pred             ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .           ..+.. ..|+.++|+||||
T Consensus       190 ~-----------d~~vler~y~~~~di~~lg  209 (232)
T PRK10359        190 K-----------DRIDLERHYGIKNEIKDLG  209 (232)
T ss_pred             H-----------HHHHHHhHhccccccccee
Confidence            0           01222 3477889999997

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=5.9e-15  Score=102.41  Aligned_cols=108  Identities=20%  Similarity=0.334  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe----CCCCceEEEeecccceec-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN----KKKSFSLKAIDFGLSVFF-   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~----~~~~~~~~l~d~g~~~~~-   75 (110)
                      +||.+.|+|.+++...+.+++..++.+..|++.-++.+|..+|||.||||+|+++..    +.....++|+|||.+.-+ 
T Consensus       773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK  852 (974)
T ss_pred             eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence            588999999999997788999999999999999999999999999999999999842    223456899999987654 


Q ss_pred             --CCcccccccccccccccccccccc-CCCccceee
Q 033837           76 --RPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS  108 (110)
Q Consensus        76 --~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~d~ws  108 (110)
                        .+...+....++-.+.++|...+. .++.+|.+-
T Consensus       853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfG  888 (974)
T KOG1166|consen  853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFG  888 (974)
T ss_pred             EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHH
Confidence              333345556677788999999854 677777653

>smart00090 RIO RIO-like kinase

Probab=99.52  E-value=2.9e-14  Score=86.59  Aligned_cols=73  Identities=22%  Similarity=0.195  Sum_probs=60.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC-CeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG-VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||++++++.........+...++..++.|++.++.++|+.+ ++|+|++|.||+++    ...++++|||.+.....
T Consensus       127 ~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~----~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      127 MEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH----DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             EEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE----CCCEEEEEChhhhccCC
Confidence            688998888776545556667778899999999999999999 99999999999996    23589999998765443

>PRK10345 hypothetical protein; Provisional

Probab=99.50  E-value=1.4e-13  Score=82.14  Aligned_cols=71  Identities=17%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             CCC--cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHHcCCeecCCCCCceEEEeCC-CCceEEEee-ccccee
Q 033837            1 MKL--CEEGELVDRIVAKGHYTERVAAAVMKTIVEVV-QVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAID-FGLSVF   74 (110)
Q Consensus         1 ~e~--~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d-~g~~~~   74 (110)
                      |||  +.+|+|.+++.+. .+.+.  ..++.+++.++ .|||+++|+||||+|+||+++..+ ....++++| ||....
T Consensus        84 ~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             ecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            578  5578999999653 56655  35577777777 899999999999999999997533 334699999 564444

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.48  E-value=1.9e-13  Score=85.34  Aligned_cols=105  Identities=17%  Similarity=0.320  Sum_probs=80.2

Q ss_pred             CCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC--CceEEEeecccceecCCccc--
Q 033837            6 EGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK--SFSLKAIDFGLSVFFRPREQ--   80 (110)
Q Consensus         6 ~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~--~~~~~l~d~g~~~~~~~~~~--   80 (110)
                      |-+|.+++... .+|+..++..++.|++.-++++|++.+|+|||||+|+++.+.+.  ...+-++|||++....+...  
T Consensus       107 GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq  186 (449)
T KOG1165|consen  107 GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ  186 (449)
T ss_pred             CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence            45888888765 46999999999999999999999999999999999999975442  23578999999988744321  


Q ss_pred             ---c---cccccccccccccccccc-CCCccceeecC
Q 033837           81 ---F---NELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        81 ---~---~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                         .   ....||..||+.....+. -+.+-|+=|||
T Consensus       187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLG  223 (449)
T KOG1165|consen  187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALG  223 (449)
T ss_pred             cCccccccccccceeeeEeeccccchhhhhhhHHHhh
Confidence               1   235788889987766543 45555655544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.48  E-value=1.9e-13  Score=82.29  Aligned_cols=109  Identities=20%  Similarity=0.291  Sum_probs=79.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||.+ |-+|.+.+.-. ..|+-.++..++.|++.-++|+|.++.+||||||+|++..-+.....+-++|||++....+..
T Consensus        90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            3444 44788877543 568899999999999999999999999999999999999654455568999999998764321


Q ss_pred             c-----c---cccccccccccccccccc-CCCccceeecC
Q 033837           80 Q-----F---NELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~---~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      .     .   ....||..|.+..+..+. -+.+-|+=|+|
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvg  208 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVG  208 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhc
Confidence            1     1   224677778776655432 34455655544

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.46  E-value=3.2e-13  Score=80.22  Aligned_cols=66  Identities=24%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCC-CCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDL-NPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l-~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+.|.+|.+....       ....++.|+..++.++|++|++|+|| +|.||+++.+   ..++++|||.+....
T Consensus        77 meyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~---g~i~LIDFG~A~~~~  143 (218)
T PRK12274         77 RSYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQED---GSPAVIDFQLAVRGN  143 (218)
T ss_pred             EeeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCC---CCEEEEECCCceecC
Confidence            688888888654321       11357789999999999999999999 7999999643   348999999987543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=1.3e-12  Score=83.56  Aligned_cols=102  Identities=25%  Similarity=0.366  Sum_probs=70.4

Q ss_pred             CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe-CCCCceEEEeecccceecCCc---ccc--
Q 033837            8 ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN-KKKSFSLKAIDFGLSVFFRPR---EQF--   81 (110)
Q Consensus         8 ~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~-~~~~~~~~l~d~g~~~~~~~~---~~~--   81 (110)
                      +|..++-. ...+......+..|+++|+.|||+.|+.|||+|.+||++.- ++.-..+.++|||++---...   ..+  
T Consensus       328 tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S  406 (598)
T KOG4158|consen  328 TLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYES  406 (598)
T ss_pred             hHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccccccccccc
Confidence            45555533 34556677778899999999999999999999999999963 334456789999976322111   111  


Q ss_pred             --cccccccccccccccc---cc---CC-CccceeecC
Q 033837           82 --NELVGSLYYMALEVLK---RN---YG-PEVDVWSML  110 (110)
Q Consensus        82 --~~~~~~~~~~~pe~~~---~~---~~-~~~d~wslg  110 (110)
                        ....|.-..+|||+..   ++   .+ .++|.|+.|
T Consensus       407 ~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~G  444 (598)
T KOG4158|consen  407 DEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAG  444 (598)
T ss_pred             ccccCCCcceecchhhhhcCCCCceeeccchhhhhhhh
Confidence              1234556689999874   32   11 378999876

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.40  E-value=7.2e-14  Score=97.00  Aligned_cols=76  Identities=36%  Similarity=0.518  Sum_probs=60.4

Q ss_pred             HHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc---------c------c-ccccccccccccccc
Q 033837           32 VEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR---------E------Q-FNELVGSLYYMALEV   95 (110)
Q Consensus        32 ~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~---------~------~-~~~~~~~~~~~~pe~   95 (110)
                      +.+++|+|+-+|+|||++|+|.+++.-+   .+|+.|||++......         .      . ....+|||.|.|||+
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mG---hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMG---HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecc---cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            6789999999999999999999996544   4899999987653110         0      0 112489999999999


Q ss_pred             ccc-cCCCccceeecC
Q 033837           96 LKR-NYGPEVDVWSML  110 (110)
Q Consensus        96 ~~~-~~~~~~d~wslg  110 (110)
                      +.. .|+..+|+|++|
T Consensus       230 ilrqgygkpvdwwamG  245 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMG  245 (1205)
T ss_pred             hhhhccCCCccHHHHH
Confidence            875 499999999987

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.39  E-value=1.8e-12  Score=77.26  Aligned_cols=66  Identities=29%  Similarity=0.443  Sum_probs=56.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||++|++|.+.+.....    ....++.+++.++.++|+.+++|+|++|.||+++    ...++++|||.+..
T Consensus        78 ~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~  143 (211)
T PRK14879         78 MEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence            689999999998865432    7788899999999999999999999999999996    23488999998765

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.39  E-value=1.7e-12  Score=79.02  Aligned_cols=68  Identities=25%  Similarity=0.337  Sum_probs=53.4

Q ss_pred             CCCcCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEE-GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||+++| .+|.+++.. .++++..    +.+++.++.++|+.||+|+|++|.||+++.++   .++++|||.+....
T Consensus       125 ~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~---~v~LIDfg~~~~~~  193 (239)
T PRK01723        125 IERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDG---KFWLIDFDRGELRT  193 (239)
T ss_pred             EEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC---CEEEEECCCcccCC
Confidence            577886 688887754 4455443    46789999999999999999999999996433   59999999876643

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.37  E-value=1.7e-12  Score=86.90  Aligned_cols=63  Identities=27%  Similarity=0.424  Sum_probs=54.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++++|.+++.        ....++.+++.++.++|+.+++|+|++|.||+++ +   ..++++|||.+...
T Consensus       415 ~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~---~~~~liDFGla~~~  477 (535)
T PRK09605        415 MEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D---DRLYLIDFGLGKYS  477 (535)
T ss_pred             EEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C---CcEEEEeCcccccC
Confidence            68999999999875        3567889999999999999999999999999993 2   24899999988764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.35  E-value=2.4e-12  Score=76.06  Aligned_cols=64  Identities=31%  Similarity=0.445  Sum_probs=53.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||++|++|.+.+.....       .++.+++.++.++|+.+++|+|++|.|++++    ...++++|||.+...
T Consensus        76 ~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~  139 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence            689999999987754321       7788999999999999999999999999996    234899999987653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.32  E-value=3.5e-12  Score=75.52  Aligned_cols=68  Identities=26%  Similarity=0.280  Sum_probs=53.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||++++++.....      ......++.+++.++.++|+.+++|+|++|.||+++.   ...++++|||.+.....
T Consensus       110 ~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~---~~~~~liDfg~~~~~~~  177 (198)
T cd05144         110 MEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD---DEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             EEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC---CCcEEEEECCccccCCC
Confidence            68888888876432      1345678889999999999999999999999999954   34589999998865433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.22  E-value=2.2e-11  Score=71.26  Aligned_cols=50  Identities=22%  Similarity=0.267  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837           22 RVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus        22 ~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      .++..++.+++.++.++|. .+++|+|++|.||+++    ...++++|||.+...
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~~~~~liDfg~a~~~  164 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----DGKVYIIDVPQAVEI  164 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----CCcEEEEECcccccc
Confidence            6678889999999999999 9999999999999996    334899999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.21  E-value=2.7e-11  Score=79.58  Aligned_cols=106  Identities=20%  Similarity=0.347  Sum_probs=82.0

Q ss_pred             CCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCC-eecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            2 KLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGV-MHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         2 e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      +||+.|+|.+.+.. ...+..-....+.++++.|+.|+|.-.+ .|..++..|.++   +.++.+|++|||+........
T Consensus        27 ~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv---d~~w~lklt~~Gl~~~~~~~~  103 (484)
T KOG1023|consen   27 EYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV---DSRWVLKLTDFGLNSLLEETA  103 (484)
T ss_pred             eeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee---eeeEEEEechhhhcccccccc
Confidence            68999999999976 4568888888899999999999997655 899999999999   667889999999876654211


Q ss_pred             --c-ccccccccccccccccccc--------CCCccceeecC
Q 033837           80 --Q-FNELVGSLYYMALEVLKRN--------YGPEVDVWSML  110 (110)
Q Consensus        80 --~-~~~~~~~~~~~~pe~~~~~--------~~~~~d~wslg  110 (110)
                        . .........|.+||.+...        .+.+.|+||+|
T Consensus       104 ~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~  145 (484)
T KOG1023|consen  104 EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFG  145 (484)
T ss_pred             cccccchhHHHHhccCHHHhcccccccccccccccCCeehHH
Confidence              1 1112234568999998632        34569999986

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=3.7e-12  Score=86.01  Aligned_cols=108  Identities=29%  Similarity=0.475  Sum_probs=86.0

Q ss_pred             CCCcCCCCHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRI-VAKG-HYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l-~~~~-~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      +||..++++++-. .... ..+...+..++.|+..++.|+| ..++.|+|++|+|.+++..+.  .++..|||++.....
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAYRN  177 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC--cccCCCchhhccccc
Confidence            4677788888877 4443 5777888899999999999999 899999999999999964332  589999999877654


Q ss_pred             -cc---ccccccc-cccccccccccc-c-CCCccceeecC
Q 033837           78 -RE---QFNELVG-SLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        78 -~~---~~~~~~~-~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                       ..   .....+| ++.|.+||...+ . .++..|+||.|
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g  217 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLG  217 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCccccccc
Confidence             22   2334678 899999999986 3 57889999987

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.17  E-value=8.7e-12  Score=77.30  Aligned_cols=81  Identities=19%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccccccccc------
Q 033837           25 AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR------   98 (110)
Q Consensus        25 ~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~------   98 (110)
                      ..+..|++..++++|+.|++|+|++|+|++++++   +.+.++||+.........  .....+..|.+||....      
T Consensus       148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~---G~v~Lg~F~~~~r~g~~~--~~~~~~~~~~PPe~~~~~~~~~~  222 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQD---GGVFLGDFSSLVRAGTRY--RCSEFPVAFTPPELESCAGQFGQ  222 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TT---S-EEE--GGGEEETTEEE--EGGGS-TTTS-HHHHHHHTSCHH
T ss_pred             HHHHHHHHHHHHHHhhcceEecccceeeEEEcCC---CCEEEcChHHHeecCcee--eccCCCcccCChhhhhhhcccCc
Confidence            4555888999999999999999999999999554   459999998554332211  11223456888987642      


Q ss_pred             ---cCCCccceeecC
Q 033837           99 ---NYGPEVDVWSML  110 (110)
Q Consensus        99 ---~~~~~~d~wslg  110 (110)
                         .++.+.|.|++|
T Consensus       223 ~~~~~t~~~DaW~LG  237 (288)
T PF14531_consen  223 NNAPYTFATDAWQLG  237 (288)
T ss_dssp             SEEEE-HHHHHHHHH
T ss_pred             ccceeeeccCHHHHH
Confidence               267788999887

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.16  E-value=1.4e-10  Score=68.54  Aligned_cols=72  Identities=13%  Similarity=0.175  Sum_probs=54.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVC-HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+.++.+.....+...+++.++..+..+++.++..+ |..+++|+|+++.||++..    ..+.++|||.+....
T Consensus       103 ME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~----~~v~iIDF~qav~~~  175 (197)
T cd05146         103 MSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD----GKVWFIDVSQSVEPT  175 (197)
T ss_pred             EEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC----CcEEEEECCCceeCC
Confidence            68887654433222333455667778889999999988 8999999999999999953    238999999776654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.09  E-value=8.7e-11  Score=72.28  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=72.9

Q ss_pred             CCcCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcC-Ce-ecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            2 KLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHG-VM-HHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lh~~~-i~-h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      .||+.|+|+..++++..  +..+++++++-+++.|+.|||+.. ++ ..-++..+++++++ ....+...|--++..   
T Consensus       267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmided-ltarismad~kfsfq---  342 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED-LTARISMADTKFSFQ---  342 (448)
T ss_pred             eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch-hhhheecccceeeee---
Confidence            48899999999987754  678999999999999999999975 44 44788888988643 223345555443322   


Q ss_pred             cccccccccccccccccccccc---C-CCccceeec
Q 033837           78 REQFNELVGSLYYMALEVLKRN---Y-GPEVDVWSM  109 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~~~---~-~~~~d~wsl  109 (110)
                         ......+|.|++||.++..   . -.++|||||
T Consensus       343 ---e~gr~y~pawmspealqrkped~n~raadmwsf  375 (448)
T KOG0195|consen  343 ---EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSF  375 (448)
T ss_pred             ---ccccccCcccCCHHHHhcCchhcchhhhhHHHH
Confidence               1223447889999999743   2 247999997

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.03  E-value=2e-09  Score=64.31  Aligned_cols=76  Identities=18%  Similarity=0.295  Sum_probs=61.2

Q ss_pred             CCCcCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEE-GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      +|++++ .+|.+++......+......++.++...+.-||..|++|+|+++.||++..++....+.++||+.+....
T Consensus        96 te~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen   96 TEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             EEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            355665 4788887764456777888899999999999999999999999999999866545578999999766543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.02  E-value=1.4e-09  Score=63.54  Aligned_cols=74  Identities=24%  Similarity=0.394  Sum_probs=57.1

Q ss_pred             CCCcCC-CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEE-GELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~-g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||.+| -++.+++.+.  ..........+++.+-..+.-||.++++|+||..+||++.+++....+-++|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            678875 3677777543  2233333467888899999999999999999999999998777666678999998754

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.99  E-value=5e-09  Score=64.83  Aligned_cols=74  Identities=18%  Similarity=0.206  Sum_probs=58.1

Q ss_pred             CCCcCCC-CHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC----CCCceEEEeecccce
Q 033837            1 MKLCEEG-ELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK----KKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g-~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~----~~~~~~~l~d~g~~~   73 (110)
                      ||++++- +|.+++..  ..+..+.....++.+++..+..||..|++|+|+++.||+++.+    +....+.++||+.+.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            4677764 78887753  3455667778899999999999999999999999999999742    224568999999774


Q ss_pred             e
Q 033837           74 F   74 (110)
Q Consensus        74 ~   74 (110)
                      .
T Consensus       194 ~  194 (268)
T PRK15123        194 I  194 (268)
T ss_pred             c
Confidence            3

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.99  E-value=3.3e-10  Score=79.93  Aligned_cols=100  Identities=22%  Similarity=0.282  Sum_probs=70.0

Q ss_pred             CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec--C-Ccc-cc--
Q 033837            8 ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF--R-PRE-QF--   81 (110)
Q Consensus         8 ~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~--~-~~~-~~--   81 (110)
                      +|.|.+.-++-+...+.+-++.|++.|+..+|..||+|+|||.+||+++.=   .++-++||..-++.  + +.+ .+  
T Consensus       106 nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW---NW~~LtDFAsFKPtYLPeDNPadf~f  182 (1431)
T KOG1240|consen  106 NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW---NWLYLTDFASFKPTYLPEDNPADFTF  182 (1431)
T ss_pred             hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee---chhhhhcccccCCccCCCCCcccceE
Confidence            566666555556777888899999999999999999999999999999532   24788999754432  1 111 11  


Q ss_pred             --ccccccccccccccccc---c---------CCCccceeecC
Q 033837           82 --NELVGSLYYMALEVLKR---N---------YGPEVDVWSML  110 (110)
Q Consensus        82 --~~~~~~~~~~~pe~~~~---~---------~~~~~d~wslg  110 (110)
                        .+...-.+|.|||....   .         ..++-||+|+|
T Consensus       183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~G  225 (1431)
T KOG1240|consen  183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAG  225 (1431)
T ss_pred             EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhh
Confidence              12223347999997632   1         34577888877

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=1.5e-09  Score=71.06  Aligned_cols=54  Identities=17%  Similarity=0.374  Sum_probs=45.9

Q ss_pred             CCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEE
Q 033837            2 KLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFV   56 (110)
Q Consensus         2 e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~   56 (110)
                      |++ |..|..++...  ..++...++.|+.||+.||.|||+ ++|||.||||+|||+.
T Consensus       166 EvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  166 EVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             hhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            444 45788888654  458999999999999999999996 6999999999999884

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=4.2e-09  Score=61.48  Aligned_cols=63  Identities=29%  Similarity=0.492  Sum_probs=49.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||++|..|.+.+...       ...++..+-.-+.-||..+|+|.|+.++|+++...+    +-++|||++..
T Consensus        78 me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~----i~~IDfGLg~~  140 (204)
T COG3642          78 MEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR----IYFIDFGLGEF  140 (204)
T ss_pred             EEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc----EEEEECCcccc
Confidence            7888887777777654       144556677777889999999999999999995432    88999998765

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.89  E-value=3.7e-09  Score=59.30  Aligned_cols=52  Identities=23%  Similarity=0.369  Sum_probs=42.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHc---CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           20 TERVAAAVMKTIVEVVQVCHKH---GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        20 ~~~~~~~~~~~i~~~l~~lh~~---~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      +......+..+++.++..+|..   +++|+|++|.|++++.   ...++++||+.+..
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~  138 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGY  138 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccC
Confidence            4456677888999999999984   6999999999999964   34589999997754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=5.4e-09  Score=65.93  Aligned_cols=107  Identities=11%  Similarity=0.046  Sum_probs=72.7

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .||++.|++.++|++.    ..+.....++|+.||++|+.|||+..  ++|.++..+.+++.+   +..+|+.--.....
T Consensus       151 teymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~---ngLIkig~~ap~s~  227 (458)
T KOG1266|consen  151 TEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQH---NGLIKIGSVAPDST  227 (458)
T ss_pred             EecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecC---CceEEecccCcccc
Confidence            4899999999999643    45888899999999999999999986  899999999999853   33355432111110


Q ss_pred             cCCcc----c-ccccccccccccccccc-ccCCCccceeecC
Q 033837           75 FRPRE----Q-FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~----~-~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      -..-.    . .....+.++|.+||.-. -+-...+|+|+||
T Consensus       228 h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg  269 (458)
T KOG1266|consen  228 HPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG  269 (458)
T ss_pred             chhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence            00000    0 01123456677887665 3456678998886

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.82  E-value=1.2e-08  Score=67.10  Aligned_cols=71  Identities=20%  Similarity=0.325  Sum_probs=51.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~-~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||++|+++.+..... ....   ...++..++. .+..+|..|++|+|++|.||++..+   ..++++|||++..+..
T Consensus       237 mE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~---g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       237 MEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKD---GKIIALDFGIVGRLSE  309 (437)
T ss_pred             EEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCC---CcEEEEeCCCeeECCH
Confidence            7999999998876432 2222   2334444443 4677899999999999999999543   4599999998877643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.78  E-value=1.1e-08  Score=58.97  Aligned_cols=62  Identities=21%  Similarity=0.303  Sum_probs=45.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCC-----eecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGV-----MHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-----~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||++|.++.+.    .    ......+.+++.++..+|+.++     +|+|++|.||+++.    ..++++||+.+..
T Consensus        70 ~e~i~G~~l~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~----~~~~liDf~~a~~  136 (170)
T cd05151          70 TEFIEGSELLTE----D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD----GRLWLIDWEYAGM  136 (170)
T ss_pred             EEecCCCccccc----c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC----CeEEEEecccccC
Confidence            567777665542    0    1123456788999999999885     99999999999962    2489999997654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.56  E-value=5.2e-08  Score=64.78  Aligned_cols=106  Identities=21%  Similarity=0.270  Sum_probs=79.5

Q ss_pred             CCcCCCCHHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            2 KLCEEGELVDRIVAKGH-YTERVAAAVMKTIVE----VVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~i~~----~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |+|. .++.++-..... ++...+.....+...    |+.++|+..++|.+++|.|++...+.  ...++.|||....+.
T Consensus       198 E~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~--~s~~~~df~~v~~i~  274 (524)
T KOG0601|consen  198 ELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW--TSCKLTDFGLVSKIS  274 (524)
T ss_pred             cccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc--ceeecCCcceeEEcc
Confidence            4454 466666654433 777888888888888    99999999999999999999985431  457889999877765


Q ss_pred             Cccccc-----c-ccccccccccccccccCCCccceeecC
Q 033837           77 PREQFN-----E-LVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~-----~-~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      +.....     . ..+..-|++||...+-++...|++++|
T Consensus       275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~  314 (524)
T KOG0601|consen  275 DGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLG  314 (524)
T ss_pred             CCccccceeeeecCCCCceEeChhhhccccchHhhhcchh
Confidence            543211     1 145567999999998888899999876

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.52  E-value=1.7e-07  Score=63.08  Aligned_cols=70  Identities=21%  Similarity=0.311  Sum_probs=48.7

Q ss_pred             CCCcCCCCHHHHH--HhCC----CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccce
Q 033837            1 MKLCEEGELVDRI--VAKG----HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l--~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~   73 (110)
                      |||+.|+++.+..  ...+    .+.+..+..++.|+       ...|++|+|++|.||+++.++ ....+.++|||...
T Consensus       240 mE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg  312 (537)
T PRK04750        240 MERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG  312 (537)
T ss_pred             EeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence            7999999998743  2323    24444444444444       458999999999999997543 23468999999887


Q ss_pred             ecCC
Q 033837           74 FFRP   77 (110)
Q Consensus        74 ~~~~   77 (110)
                      .+..
T Consensus       313 ~l~~  316 (537)
T PRK04750        313 SLNK  316 (537)
T ss_pred             ECCH
Confidence            6643

>PRK09902 hypothetical protein; Provisional

Probab=98.48  E-value=1.1e-06  Score=52.63  Aligned_cols=67  Identities=15%  Similarity=0.138  Sum_probs=54.5

Q ss_pred             CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            7 GELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         7 g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      -||.+++.+.  .+.++.+...+..+++..+..||+.|+.|+|+.+.||+++.++ ...++++||..++.
T Consensus       111 ~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~  179 (216)
T PRK09902        111 ISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR  179 (216)
T ss_pred             ccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence            4777777543  4567777788999999999999999999999999999996433 45699999986654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.47  E-value=1.1e-07  Score=63.36  Aligned_cols=106  Identities=23%  Similarity=0.249  Sum_probs=74.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      .|||+++++.....-...+.+.....+..|++.++.++|+..++|.|++|.||++..++  ...++.|++....+.-...
T Consensus       345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~~~~  422 (524)
T KOG0601|consen  345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAFSSG  422 (524)
T ss_pred             hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccceecc
Confidence            37899888888776566788888999999999999999999999999999999996543  5578888886543211111


Q ss_pred             ccccccccccc-cccccc--ccCCCccceeecC
Q 033837           81 FNELVGSLYYM-ALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~-~pe~~~--~~~~~~~d~wslg  110 (110)
                      .  ....-.+. ..|++.  ..+..++|++|||
T Consensus       423 ~--~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~  453 (524)
T KOG0601|consen  423 V--FHHIDRLYPIAEILLEDYPHLSKADIFSLG  453 (524)
T ss_pred             c--ccccccccccchhhcccccccccccccccc
Confidence            0  11122233 245544  3366778888775

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.46  E-value=1.6e-07  Score=55.42  Aligned_cols=70  Identities=24%  Similarity=0.315  Sum_probs=42.7

Q ss_pred             CCCcC--CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCE--EGELVDRIVAKGHYTERVAAAVMKTIVEVVQV-CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||++  |..+.. +.... +.......++.+++..+.. +|..|++|+|+.+.||++..+    .+.++|||.+....
T Consensus        85 ME~I~~~G~~~~~-l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~----~~~iIDf~qav~~~  157 (188)
T PF01163_consen   85 MEYIGEDGVPLPR-LKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG----KVYIIDFGQAVDSS  157 (188)
T ss_dssp             EE--EETTEEGGC-HHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT----CEEE--GTTEEETT
T ss_pred             EEecCCCccchhh-HHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc----eEEEEecCcceecC
Confidence            67887  433433 32221 1134456666777775554 579999999999999999643    48999999776544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.31  E-value=1.3e-06  Score=52.71  Aligned_cols=61  Identities=33%  Similarity=0.397  Sum_probs=45.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      |||++|..+.+...    +++    .....+.+++..+|+.|+.|+|..|.|+++..++    ++++|++.-.
T Consensus       122 ~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~----i~iID~~~k~  182 (229)
T PF06176_consen  122 MEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG----IRIIDTQGKR  182 (229)
T ss_pred             EEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc----EEEEECcccc
Confidence            68888877766532    222    2345567788999999999999999999996432    8999997543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.30  E-value=1.6e-07  Score=61.88  Aligned_cols=47  Identities=30%  Similarity=0.529  Sum_probs=36.2

Q ss_pred             CceEEEeecccceecCCccccccccccccccccccccc-cCCCccceeec
Q 033837           61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM  109 (110)
Q Consensus        61 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wsl  109 (110)
                      ...+||+|||-+.+...  .+...+.|..|++||++.+ .|++.+||||+
T Consensus       390 di~vKIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsgY~~~ADiWS~  437 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSGYSTSADIWST  437 (590)
T ss_pred             ceeEEEeeccchhhhhh--hhchhhhhhhccCcceeecCCCCCchhHHHH
Confidence            44699999998776321  2334466889999999986 59999999996

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.25  E-value=4.7e-07  Score=64.32  Aligned_cols=107  Identities=23%  Similarity=0.326  Sum_probs=76.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee------
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF------   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~------   74 (110)
                      |+|..++++...++..+...+.-++.+...+..+.++||+..+.|++++|.+++....+.   .++.+|+....      
T Consensus       883 ~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh---~~l~~~~t~~~vg~~~p  959 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGH---RPLTDFGTLSKVGLIPP  959 (1205)
T ss_pred             hHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCC---cccCccccccccccccC
Confidence            466778899998887777777777888888899999999998999999999999854443   45555541110      


Q ss_pred             ---------------cCC---cc--------cccccccccccccccccccc-CCCccceeecC
Q 033837           75 ---------------FRP---RE--------QFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        75 ---------------~~~---~~--------~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                                     +..   ..        ......+++.|.+||.+.+. .++.+|+|+.|
T Consensus       960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g 1022 (1205)
T KOG0606|consen  960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSG 1022 (1205)
T ss_pred             cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhh
Confidence                           000   00        01123678889999999854 67889999876

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.12  E-value=2.9e-06  Score=58.03  Aligned_cols=81  Identities=21%  Similarity=0.325  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccc-----cc-----cccccccccccc
Q 033837           27 VMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF-----NE-----LVGSLYYMALEV   95 (110)
Q Consensus        27 ~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~-----~~-----~~~~~~~~~pe~   95 (110)
                      -+.++..|+.++|. .+++|+++.|++|.+...   ...|+..|+++........+     ..     ......|.+||+
T Consensus       104 nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~---~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~  180 (700)
T KOG2137|consen  104 NLGNVADGLAFLHRSAKVVHGNIQPEAIVVNAN---GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEY  180 (700)
T ss_pred             hhhcccchhhhhccCcceeecccchhheeeccC---cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchh
Confidence            34556789999996 589999999999999543   34899999876654332111     11     122345899999


Q ss_pred             cccc-CCCccceeecC
Q 033837           96 LKRN-YGPEVDVWSML  110 (110)
Q Consensus        96 ~~~~-~~~~~d~wslg  110 (110)
                      +... ..+++|++|+|
T Consensus       181 ~~~~~~~~~sd~fSlG  196 (700)
T KOG2137|consen  181 LLGTTNTPASDVFSLG  196 (700)
T ss_pred             hccccccccccceeee
Confidence            9854 67889999987

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.89  E-value=2.6e-05  Score=46.56  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=24.5

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||+++.+ ....+.++||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence            457999999999999642 123478999986643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.85  E-value=0.00012  Score=48.57  Aligned_cols=78  Identities=15%  Similarity=0.119  Sum_probs=60.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccccccccccccccccccc
Q 033837           17 GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL   96 (110)
Q Consensus        17 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~   96 (110)
                      ..+.+..+...++.++.+..-+|..|-.-+|++++|+++.   +...+.+.|-..-....+.....+..|...|++||..
T Consensus       112 P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ  188 (637)
T COG4248         112 PHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQ  188 (637)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcccceeeccCCceEecccCccccCCHHHh
Confidence            4477889999999999999999999999999999999994   4445788875433233344445566788899999986


Q ss_pred             c
Q 033837           97 K   97 (110)
Q Consensus        97 ~   97 (110)
                      .
T Consensus       189 ~  189 (637)
T COG4248         189 T  189 (637)
T ss_pred             c
Confidence            4

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.79  E-value=6.3e-06  Score=57.18  Aligned_cols=47  Identities=23%  Similarity=0.338  Sum_probs=33.6

Q ss_pred             EEEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           64 LKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        64 ~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .++.+|+.+........   .....||+.|++||++.+ .++.++|+||||
T Consensus       517 ~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG  567 (669)
T cd05610         517 KIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALG  567 (669)
T ss_pred             cccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHH
Confidence            46678886655432211   223578999999999875 489999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.73  E-value=8.2e-05  Score=46.39  Aligned_cols=67  Identities=24%  Similarity=0.320  Sum_probs=47.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||++|-.|...-     +....+..++..|+..+.-+-..|++|+|+++=||+++.++.   +.++||--+...
T Consensus       186 Me~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~---~~vIDwPQ~v~~  252 (304)
T COG0478         186 MEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD---IVVIDWPQAVPI  252 (304)
T ss_pred             eehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC---EEEEeCcccccC
Confidence            6777765554432     234555666677777777777899999999999999976544   899999755443

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.06  E-value=0.0025  Score=43.47  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=48.4

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||.|..+.+.-. ....+....+.....+...  ..+-..|.+|.|-.|-||++.+.. ....+.+.|+|+...+..
T Consensus       281 ME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  281 MEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             EEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            89999876665432 2233444544443333332  233456799999999999997432 345688999998776543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.99  E-value=0.0028  Score=39.27  Aligned_cols=51  Identities=25%  Similarity=0.290  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837           22 RVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus        22 ~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ..+..+..+++..+.-|.. .+++|.||+.=||++..    ..+.++|++-+....
T Consensus       166 ~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~----~~p~iID~~QaV~~~  217 (268)
T COG1718         166 EEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHD----GEPYIIDVSQAVTID  217 (268)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEEC----CeEEEEECccccccC
Confidence            3677788889988888887 89999999999999962    247899999776654

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.91  E-value=0.0021  Score=47.33  Aligned_cols=109  Identities=17%  Similarity=0.112  Sum_probs=67.5

Q ss_pred             CCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEe--ecccceecCCcc
Q 033837            2 KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI--DFGLSVFFRPRE   79 (110)
Q Consensus         2 e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~--d~g~~~~~~~~~   79 (110)
                      |+|+.-++.+.+..-+..+...++.+..+...|+.++|+....|.-+......-...+....+++.  +|+.+..+.+..
T Consensus       266 ~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~  345 (1351)
T KOG1035|consen  266 EICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE  345 (1351)
T ss_pred             hhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcc
Confidence            577878888888888889999999999999999999999865555443332111100111123333  777666655544


Q ss_pred             cccccccccccccccccccc-C--CCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN-Y--GPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~-~--~~~~d~wslg  110 (110)
                      .........-+.++|....+ +  +...|+|.+|
T Consensus       346 ~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  346 KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             cchhhcCccccccccccccccchhhhhhHHHHHH
Confidence            33333334446667766533 2  3346888664

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.71  E-value=0.0071  Score=42.12  Aligned_cols=49  Identities=8%  Similarity=0.103  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHHHH-HcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           22 RVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        22 ~~~~~~~~~i~~~l~~lh-~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      ..+.--+.||+.||.||| +++++|+++.-+.++++..+   .-++.+|..+.
T Consensus       104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G---eWkLggle~v~  153 (690)
T KOG1243|consen  104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG---EWKLGGLELVS  153 (690)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC---cEEEeeeEEEe
Confidence            344455689999999998 67899999999999996544   47888887553

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.65  E-value=0.0087  Score=40.85  Aligned_cols=72  Identities=18%  Similarity=0.288  Sum_probs=47.6

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+.|-.+.+... +....+...+.....++  -+..+-..|..|.|..|-|+++..+   +.+-+.|||....+..
T Consensus       245 mE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~--f~~q~~~dgffHaDpHpGNi~v~~~---g~i~~lDfGi~g~l~~  317 (517)
T COG0661         245 MEWIDGIKISDIAALKSAGIDRKELAELLVRA--FLRQLLRDGFFHADPHPGNILVRSD---GRIVLLDFGIVGRLDP  317 (517)
T ss_pred             EEeeCCEecccHHHHHhcCCCHHHHHHHHHHH--HHHHHHhcCccccCCCccceEEecC---CcEEEEcCcceecCCH
Confidence            79999988888742 22445533433322222  1233445899999999999999654   4588999998766543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.46  E-value=0.049  Score=32.70  Aligned_cols=60  Identities=27%  Similarity=0.353  Sum_probs=40.3

Q ss_pred             CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCc-eEEEee-cccc
Q 033837            8 ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF-SLKAID-FGLS   72 (110)
Q Consensus         8 ~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~-~~~l~d-~g~~   72 (110)
                      +|.+++. .+.+++ .+...   +-.-..++-+..|+.+|++|.||++...+... .+.++| ||..
T Consensus       109 TL~~~l~-~~~~~~-~~~~~---L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  109 TLEDYLK-EGGLTE-ELRQA---LDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             cHHHHHH-cCCccH-HHHHH---HHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence            5666663 344555 33333   33446678889999999999999998655444 677777 5533

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.29  E-value=0.0013  Score=45.76  Aligned_cols=78  Identities=19%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcccccccccccccccccccc-ccCCCc
Q 033837           25 AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPE  103 (110)
Q Consensus        25 ~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~  103 (110)
                      ....+.-..++.++|+.-=+|+|    ||+..+    ...+..+|+....+......+...+++.+++||+.. +.+...
T Consensus       339 ~~~~r~et~~l~~l~~~~~~~~d----~~l~s~----~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~  410 (829)
T KOG0576|consen  339 AYPLRKETRPLAELHSSYKVHRD----NILGSE----EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGC  410 (829)
T ss_pred             hhhhhhhcccccccccccccCcc----cccccc----cccccccccCCcccCcccccccCCCCCCCCCchhhcccccccC
Confidence            33444445667777766545665    665532    347888998877776554445667889999999876 457788


Q ss_pred             cceeecC
Q 033837          104 VDVWSML  110 (110)
Q Consensus       104 ~d~wslg  110 (110)
                      .|.|+++
T Consensus       411 p~~~~~~  417 (829)
T KOG0576|consen  411 PDSGSLA  417 (829)
T ss_pred             CCccCCC
Confidence            8888864

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.07  E-value=0.019  Score=34.12  Aligned_cols=52  Identities=15%  Similarity=0.110  Sum_probs=42.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---cCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHK---HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      ..++.+...++.+++..+.+++.   ..+.-.|++++|+.+..+   ..+|++|....
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~---~~lk~iDld~v  109 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD---GRLKLIDLDDV  109 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC---CcEEEEechhc
Confidence            35788899999999999999986   346677999999999643   34999998744

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.99  E-value=0.035  Score=38.16  Aligned_cols=55  Identities=20%  Similarity=0.306  Sum_probs=44.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837           18 HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus        18 ~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      ..++..+..++.|+..|+.++|+.|+..+-+.+.+|+++..   .+++++.-|....+
T Consensus       389 ~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~---~RIriS~C~i~Dvl  443 (655)
T KOG3741|consen  389 KAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK---MRIRISGCGIMDVL  443 (655)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc---ceEEEecccceeee
Confidence            47789999999999999999999999999999999999632   24676655544433

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=95.75  E-value=0.027  Score=36.41  Aligned_cols=29  Identities=31%  Similarity=0.536  Sum_probs=23.5

Q ss_pred             CeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           43 VMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        43 i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      +||.|+.+.||+++.++.  ...++||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~--~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTD--VSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCC--eeeEEEccccc
Confidence            899999999999965433  47889998654

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.61  E-value=0.067  Score=33.83  Aligned_cols=29  Identities=28%  Similarity=0.501  Sum_probs=23.1

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      .+++|+|+.+.|++++. +   .+.++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~---~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-N---EVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-C---cEEEEECcccc
Confidence            46899999999999964 2   36899998553

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK05231 homoserine kinase; Provisional

Probab=95.52  E-value=0.015  Score=36.95  Aligned_cols=31  Identities=32%  Similarity=0.413  Sum_probs=23.9

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+++|+|+.+.|++++.+   ....++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~---~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGD---RLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECC---ceEEEEecccccC
Confidence            479999999999999632   2357999986643

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.50  E-value=0.031  Score=33.89  Aligned_cols=32  Identities=25%  Similarity=0.379  Sum_probs=24.5

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||+++..  ...+.++||..+..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~--~~~~~lIDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEE--KNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCC--CCCEEEEEcccCCc
Confidence            358999999999999742  12489999986643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.48  E-value=0.055  Score=34.38  Aligned_cols=30  Identities=37%  Similarity=0.619  Sum_probs=24.2

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      .+++|+|+.+.|++++.++   .+.++||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~---~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDS---VKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCc---eEEEeeccccc
Confidence            6799999999999996432   35899998664

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.48  E-value=0.047  Score=34.48  Aligned_cols=33  Identities=30%  Similarity=0.481  Sum_probs=24.4

Q ss_pred             CCeecCCCCCceEEEeC-CCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNK-KKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~-~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||+++.+ +....+.++||..+..
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            47999999999999642 0013488999987654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK06149 hypothetical protein; Provisional

Probab=95.27  E-value=0.044  Score=40.34  Aligned_cols=34  Identities=21%  Similarity=0.230  Sum_probs=25.1

Q ss_pred             HcCCeecCCCCCceEEEeCCCC--ceEEEeecccce
Q 033837           40 KHGVMHHDLNPKKILFVNKKKS--FSLKAIDFGLSV   73 (110)
Q Consensus        40 ~~~i~h~~l~~~~il~~~~~~~--~~~~l~d~g~~~   73 (110)
                      ..++||.|+++.||+++.+...  ....++|||.+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            4679999999999999754211  235799999653

>PHA03111 Ser/Thr kinase; Provisional

Probab=95.16  E-value=0.091  Score=34.44  Aligned_cols=46  Identities=17%  Similarity=0.243  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHHHHHHHHHH----HcCCeecCCCCCceEEEeCCCCceEEE
Q 033837           21 ERVAAAVMKTIVEVVQVCH----KHGVMHHDLNPKKILFVNKKKSFSLKA   66 (110)
Q Consensus        21 ~~~~~~~~~~i~~~l~~lh----~~~i~h~~l~~~~il~~~~~~~~~~~l   66 (110)
                      ..-++.++-|++.-.....    ..+.+|-||||+||++.+.+....+++
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~  327 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITL  327 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEE
Confidence            3456777777766553332    235899999999999975543333333

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.12  E-value=0.043  Score=33.46  Aligned_cols=31  Identities=29%  Similarity=0.315  Sum_probs=23.4

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.|++++.+   ....++||+.+..
T Consensus       164 ~~l~HGD~~~~Nvlv~~~---~i~giIDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDG---RLSAVIDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEECC---CEEEEEeCcccCc
Confidence            458999999999999532   2346999996543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.98  E-value=0.1  Score=32.86  Aligned_cols=30  Identities=33%  Similarity=0.469  Sum_probs=23.4

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      .+++|+|+.|.|++++.+   ..+.++||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~---~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGD---ELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCC---ceEEEeehhhhc
Confidence            469999999999999642   235799998654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK06148 hypothetical protein; Provisional

Probab=94.84  E-value=0.081  Score=39.20  Aligned_cols=34  Identities=32%  Similarity=0.344  Sum_probs=25.3

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++||.|+++.||+++.+......-++|||.+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            5699999999999997543223345999996543

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.65  E-value=0.11  Score=32.64  Aligned_cols=49  Identities=22%  Similarity=0.323  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHHHHHHHc--CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           23 VAAAVMKTIVEVVQVCHKH--GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        23 ~~~~~~~~i~~~l~~lh~~--~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+...+..+-..+.-.+..  -++|+|+.+.|++.+.   ...+.++||..+..
T Consensus       133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~---~~~l~LIDWEyAg~  183 (269)
T COG0510         133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD---KGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcC---CCcEEEEecccCCC
Confidence            3343444444444444433  5899999999999954   34599999976543

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.54  E-value=0.052  Score=32.31  Aligned_cols=28  Identities=18%  Similarity=0.310  Sum_probs=22.5

Q ss_pred             CeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           43 VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        43 i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+|+|+.|.|+++..++    ++++|++.+..
T Consensus        79 p~H~D~~~~N~~~~~~~----~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG----LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC----EEEEeCCcccC
Confidence            59999999999985432    78999987654

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.43  E-value=0.003  Score=48.35  Aligned_cols=105  Identities=16%  Similarity=0.112  Sum_probs=66.7

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHc-C----CeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKH-G----VMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~-~----i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      ++||.+|++++.+-++    +...+..+-....+......-+|+. +    .+|+++++.|.++.   .+..+++.++|+
T Consensus      1310 ~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIV---tny~v~~gk~gL 1386 (2724)
T KOG1826|consen 1310 SLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIV---TNYNVKLGKGGL 1386 (2724)
T ss_pred             HHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhcccee---cCCccccccccc
Confidence            4678889999988655    2343344433344435555555543 2    57899999999984   344588999998


Q ss_pred             ceecCCc-cccccccccccccccccccc-cCCCccceee
Q 033837           72 SVFFRPR-EQFNELVGSLYYMALEVLKR-NYGPEVDVWS  108 (110)
Q Consensus        72 ~~~~~~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~d~ws  108 (110)
                      .+...+. .......+++.|+.+++... .++.++|+|.
T Consensus      1387 dKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr 1425 (2724)
T KOG1826|consen 1387 DKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILR 1425 (2724)
T ss_pred             ccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHH
Confidence            8733222 22233466777777777663 3666688886

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.35  E-value=0.046  Score=33.74  Aligned_cols=29  Identities=21%  Similarity=0.348  Sum_probs=23.2

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.|++++.++    +.++||..+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~----~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG----LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC----CEEEeccccCc
Confidence            489999999999996533    68999986644

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.31  E-value=0.084  Score=34.70  Aligned_cols=39  Identities=21%  Similarity=0.282  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHHHHH----HcCCeecCCCCCceEEEeCCC
Q 033837           22 RVAAAVMKTIVEVVQVCH----KHGVMHHDLNPKKILFVNKKK   60 (110)
Q Consensus        22 ~~~~~~~~~i~~~l~~lh----~~~i~h~~l~~~~il~~~~~~   60 (110)
                      .-++.++-|++.-..-..    ..+.+|-||||+||++.+...
T Consensus       275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~  317 (434)
T PF05445_consen  275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKE  317 (434)
T ss_pred             HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCC
Confidence            334555566654331121    235899999999999965443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.25  E-value=0.059  Score=32.95  Aligned_cols=31  Identities=23%  Similarity=0.024  Sum_probs=23.9

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.|++++++   ..+.++||+.+..
T Consensus       163 ~~l~HgD~~~~Nil~~~~---~~~~iIDwe~a~~  193 (244)
T cd05150         163 LVVTHGDACLPNIIVDPG---KFSGFIDLGRLGV  193 (244)
T ss_pred             eEEECCCCCCccEEEeCC---cEEEEEEcccccc
Confidence            348999999999999642   3467999986643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.06  E-value=0.058  Score=32.26  Aligned_cols=32  Identities=28%  Similarity=0.360  Sum_probs=19.6

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||++++.  ...+.++||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~--~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPS--DGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESS--TTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceeeec--cceeEEEecccceE
Confidence            459999999999999722  23347999986644

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PLN02236 choline kinase

Probab=93.92  E-value=0.16  Score=33.07  Aligned_cols=31  Identities=23%  Similarity=0.477  Sum_probs=24.4

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+++.||++++.+  ..+.++||..+..
T Consensus       201 ~~cH~Dl~~~Nil~~~~~--~~~~lID~Eya~~  231 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEET--RAITIIDYEYASY  231 (344)
T ss_pred             eEEeCCCCcCcEEEeCCC--CcEEEEeehhccc
Confidence            589999999999996422  3589999986654

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.73  E-value=0.048  Score=32.67  Aligned_cols=32  Identities=38%  Similarity=0.510  Sum_probs=18.6

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||++.  .....++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~--~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILIN--NKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEET--SSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEec--cCCCeEEEecHHHHhh
Confidence            3489999999999992  1223499999987654

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=93.71  E-value=0.14  Score=30.98  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837           27 VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus        27 ~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      -+.++..-+..+|..||+-+|+++.|..=        =+++|||.+
T Consensus       169 ~~~~~~~dl~~~~k~gI~~~Dv~~~ny~~--------G~lvDfs~~  206 (207)
T PF13095_consen  169 DIPQMLRDLKILHKLGIVPRDVKPRNYRG--------GKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCccccccC--------CEEEecccC
Confidence            34566777888999999999999999863        378899853

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.51  E-value=0.33  Score=32.42  Aligned_cols=51  Identities=20%  Similarity=0.274  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837           21 ERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus        21 ~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      ..++..++.+.+.-+.-+... ..-||++...||+++    .+.+.++||.+++.-
T Consensus       320 ~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId----~GnvtLIDfklsRl~  371 (488)
T COG5072         320 SEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID----EGNVTLIDFKLSRLS  371 (488)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee----cCceEEEEeeeeecc
Confidence            456666666665555545543 588999999999995    345999999988743

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=93.32  E-value=0.27  Score=31.31  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=23.4

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      +++|+|+.+.|++++.++   .+.++||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~---~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETR---GGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCC---CEEEEEhhhccc
Confidence            699999999999995433   378899875543

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=93.05  E-value=0.12  Score=33.41  Aligned_cols=30  Identities=23%  Similarity=0.382  Sum_probs=23.6

Q ss_pred             CeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           43 VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        43 i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+|+|+.+.||++.+++  ..++++||..+..
T Consensus       184 ~CHnDl~~~NiL~~~~~--~~l~lID~EYag~  213 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDE--GKLYFIDFEYGSY  213 (330)
T ss_pred             EEECCCCcccEEEeCCC--CcEEEEcccccCC
Confidence            79999999999996432  2489999986654

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=92.98  E-value=0.47  Score=31.37  Aligned_cols=47  Identities=21%  Similarity=0.405  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           25 AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        25 ~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..+...+..-+.-|-..|+||+|.+-=||++..++   .++++||--+..
T Consensus       205 ~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~---~i~vIDFPQmvS  251 (465)
T KOG2268|consen  205 PTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDD---KIVVIDFPQMVS  251 (465)
T ss_pred             HHHHHHHHHHHHHHHHcCceecccchheeEEecCC---CEEEeechHhhc
Confidence            33445555666778889999999999999996543   389999974443

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.88  E-value=0.13  Score=31.43  Aligned_cols=29  Identities=21%  Similarity=0.243  Sum_probs=22.8

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.|.|++++.++    +.++||+.+..
T Consensus       154 ~~~HgD~~~~Nii~~~~~----~~iIDwe~a~~  182 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG----TYWIDLGDFGY  182 (226)
T ss_pred             ceEecCCCCCcEEEcCCC----cEEEechhcCc
Confidence            478999999999995422    78999986643

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=92.58  E-value=0.19  Score=29.98  Aligned_cols=34  Identities=29%  Similarity=0.425  Sum_probs=25.2

Q ss_pred             cCCeecCCCCCceEEEeCCC--CceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKK--SFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~--~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.|+++..++.  ...+.++||..+..
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            45899999999999964321  12578999987654

subfamily of choline kinases

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=92.24  E-value=0.15  Score=32.98  Aligned_cols=31  Identities=16%  Similarity=0.375  Sum_probs=24.9

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.|+++++.+.   +-++||+.+..
T Consensus       198 ~~lvHGD~~~gNlii~~~~~---~gVlDwe~~~l  228 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRP---TGVLDWELATL  228 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCe---eEEEecccccc
Confidence            34899999999999975443   88999987654

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.98  E-value=0.2  Score=31.59  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=23.4

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.|++++.+  .....++||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDED--ARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCC--CCEEEEECcHhccc
Confidence            48999999999999642  22356999986643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK11768 serine/threonine protein kinase; Provisional

Probab=91.47  E-value=0.61  Score=30.10  Aligned_cols=29  Identities=21%  Similarity=0.276  Sum_probs=22.7

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+++|.|+.+.|+++.  +   .+.++||+.+..
T Consensus       196 ~~liHgD~h~~NvL~~--d---~~~iIDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR--D---GPHFVDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc--C---CcEEEeCCCCCC
Confidence            4689999999999993  2   267899986643

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=89.30  E-value=1  Score=28.36  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=24.6

Q ss_pred             CCeecCCCCCceEEEeCCC--CceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKK--SFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~--~~~~~l~d~g~~~~   74 (110)
                      -++|+|+...||++..++.  ...+.++||-.+..
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            3899999999999965432  23588999976544

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=88.90  E-value=0.5  Score=31.60  Aligned_cols=30  Identities=23%  Similarity=0.466  Sum_probs=23.8

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||++..+    .++++|+..+..
T Consensus       223 ~~l~HgDl~~gni~~~~~----~~~viD~E~a~~  252 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE----ETKVIDPEFAFY  252 (401)
T ss_pred             CceeeccCCcccEEeeCC----CcEEEecccccc
Confidence            469999999999999643    378999876543

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=87.32  E-value=2  Score=29.07  Aligned_cols=55  Identities=22%  Similarity=0.252  Sum_probs=41.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837           17 GHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus        17 ~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      ..+....+..+-.+++.-+..|. .++++|-||.-=|+++..    +.+-++|.+-+...
T Consensus       259 ~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd----G~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  259 ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD----GKLYIIDVSQSVEH  314 (520)
T ss_pred             ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC----CEEEEEEccccccC
Confidence            34666777777777777776655 578999999999999843    34889998866554

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=87.12  E-value=0.89  Score=28.49  Aligned_cols=36  Identities=25%  Similarity=0.260  Sum_probs=26.5

Q ss_pred             HHHHHHHHH--cCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837           32 VEVVQVCHK--HGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus        32 ~~~l~~lh~--~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      +..+.-.|+  .+.+|+|..|+||+-+..   +-+|+.|=+
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~---G~lKlVDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKF---GYLKLVDPV  188 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCC---CCEEecChh
Confidence            345667784  469999999999998544   448888744

The function of this family is unknown.

>PLN02876 acyl-CoA dehydrogenase

Probab=86.98  E-value=0.8  Score=33.45  Aligned_cols=32  Identities=22%  Similarity=0.494  Sum_probs=23.8

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+++.|++++.++. ...-++||..+..
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~-~v~aVLDWE~a~~  257 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTED-RVIGILDWELSTL  257 (822)
T ss_pred             ceEecCcccccEEEcCCCC-eEEEEEeeecccc
Confidence            4999999999999964322 2357899886644

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=86.36  E-value=0.58  Score=30.96  Aligned_cols=30  Identities=23%  Similarity=0.385  Sum_probs=23.2

Q ss_pred             HcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837           40 KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus        40 ~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      ...++|+|+.+.||++.+++    .+++|+..+.
T Consensus       191 ~~~llHGDl~~gNi~~~~~~----~~~iD~e~~~  220 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE----TKVIDPEFAF  220 (370)
T ss_pred             cceeeeccCCcccEEEcCCC----CEEEcCcccc
Confidence            35689999999999995432    6789987553

This enzyme is involved in the methionine salvage pathway in certain bacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	110
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-21
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-21
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-19
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		5e-19
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		5e-19
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		9e-19
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-18
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-18
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-18
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-18
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-17
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-17
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-17
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-17
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-16
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-15
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-15
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-15
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-15
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-15
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-15
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-15
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-15
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-15
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-15
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-15
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-15
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-15
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-15
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-15
3soa_A	444	Full-Length Human Camkii Length = 444		5e-14
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-14
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		8e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-13
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-13
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		5e-13
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		7e-13
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		9e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-12
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-12
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-12
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-12
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-12
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		2e-12
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-12
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		2e-12
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		2e-12
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		2e-12
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		2e-12
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-12
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-12
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-12
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-12
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		6e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		6e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		7e-12
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-12
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		9e-12
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-11
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-11
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-11
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-11
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-11
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-11
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-11
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-11
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-11
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-11
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-11
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-11
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-11
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-10
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-10
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-10
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-10
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-10
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-10
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-10
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		3e-10
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-10
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		7e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		8e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		9e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		9e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		9e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		9e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		9e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-09
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-09
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-09
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-09
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-09
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-09
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-09
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-09
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		3e-09
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-09
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-09
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		4e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		6e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		8e-09
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		8e-09
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-08
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-08
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-08
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-08
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-08
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-08
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-08
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-08
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-08
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-08
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-08
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-08
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-08
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-08
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-08
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-08
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-08
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-08
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-08
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-08
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		3e-08
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-08
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-08
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		3e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-08
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		4e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-08
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-08
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		4e-08
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-08
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-08
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		4e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-08
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-08
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		5e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		6e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		8e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-07
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-07
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-07
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		5e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-07
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		7e-07
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		7e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-07
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		8e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		8e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-07
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		8e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		9e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		9e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-07
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-06
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-06
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		3e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-06
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-06
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		3e-06
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-06
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		3e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-06
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		3e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		3e-06
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		3e-06
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		3e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		3e-06
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		3e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		3e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-06
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-06
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		3e-06
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		3e-06
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		3e-06
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		3e-06
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		3e-06
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-06
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		3e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-06
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-06
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		3e-06
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		3e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-06
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		3e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-06
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-06
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-06
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-06
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-06
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		5e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		6e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-06
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-06
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-06
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-06
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		7e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-06
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-06
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		8e-06
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		8e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-06
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		8e-06
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		8e-06
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-06
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-06
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-06
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-06
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		8e-06
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-06
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-06
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-06
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		9e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		9e-06
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-06
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-06
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		9e-06
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-06
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-05
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-05
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-05
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-05
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-05
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		2e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-05
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-05
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-05
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		3e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		3e-05
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		3e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-05
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-05
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-05
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-05
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		4e-05
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		5e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-05
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		5e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		6e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		6e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		7e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		9e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-04
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-04
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		5e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		5e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		5e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		6e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		6e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		6e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		6e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		6e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		6e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		6e-04
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		7e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-04
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		7e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-04
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		7e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		8e-04
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		8e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		9e-04

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 64/108 (59%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LC  GEL +R+V K  + E  AA +MK ++  V  CHK  V H DL P+  LF+    
Sbjct: 85  MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              LK IDFGL+  F+P +     VG+ YY++ +VL+  YGPE D WS
Sbjct: 145 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWS 192

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 64/108 (59%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LC  GEL +R+V K  + E  AA +MK ++  V  CHK  V H DL P+  LF+    
Sbjct: 102 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 161
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              LK IDFGL+  F+P +     VG+ YY++ +VL+  YGPE D WS
Sbjct: 162 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWS 209

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL DRIV KG+Y+ER AA  +K I+E V   H++G++H DL P+ +L+     
Sbjct: 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAP 186
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              LK  DFGLS     +     + G+  Y A E+L+   YGPEVD+WS+
Sbjct: 187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 62/102 (60%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+ +  ++E  AA ++K +   +   HKH ++H DL P+ IL  +K+K   +K 
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F+   +  + +G+ YY+A EVL+  Y  + DVWS
Sbjct: 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 62/102 (60%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+ +  ++E  AA ++K +   +   HKH ++H DL P+ IL  +K+K   +K 
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F+   +  + +G+ YY+A EVL+  Y  + DVWS
Sbjct: 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/102 (39%), Positives = 62/102 (60%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+ +  ++E  AA ++K +   +   HKH ++H DL P+ IL  +K+K   +K 
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F+   +  + +G+ YY+A EVL+  Y  + DVWS
Sbjct: 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 5   EEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL 64
           E GEL ++I+ +  + E  AA +MK I+  +   HKH ++H D+ P+ IL  NK    ++
Sbjct: 129 EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188
Query: 65  KAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           K +DFGLS FF    +  + +G+ YY+A EVLK+ Y  + DVWS
Sbjct: 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWS 232

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 65/103 (63%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+ +  + E  AA ++K ++  V   HKH ++H DL P+ +L  +K+K   +K 
Sbjct: 121 GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI 180
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           +DFGLS  F  +++  E +G+ YY+A EVL++ Y  + DVWS+
Sbjct: 181 VDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSI 223

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M++   GEL D I+ +  ++E  AA +MK ++      HKH ++H DL P+ +L  +K +
Sbjct: 83  MEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 142
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              +K +DFGLS  F    +  E +G+ YY+A EVL++ Y  + DVWS
Sbjct: 143 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWS 190

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M++   GEL D I+ +  ++E  AA +MK ++      HKH ++H DL P+ +L  +K +
Sbjct: 100 MEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 159
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              +K +DFGLS  F    +  E +G+ YY+A EVL++ Y  + DVWS
Sbjct: 160 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWS 207

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K  +++ 
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K  +++ 
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 176
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 177 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 218

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K  +++ 
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 195 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 236

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K  +++ 
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 194 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 235

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 63/102 (61%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K  +++ 
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 171 IDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWS 212

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 1   MKLCEEGELVDRIV---AKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           M+ CE GEL++RIV   A+G   +E   A +MK ++  +   H   V+H DL P+ ILF 
Sbjct: 99  METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158
Query: 57  NKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           +      +K IDFGL+  F+  E      G+  YMA EV KR+   + D+WS
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWS 210

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K  ++K 
Sbjct: 89  GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+
Sbjct: 149 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 191

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K  ++K 
Sbjct: 90  GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K  ++K 
Sbjct: 90  GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L   GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K  
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
           ++K  DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+
Sbjct: 169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTER A+ ++  +++ V+  H  G++H DL P+ +L+ +  +
Sbjct: 95  MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +   DFGLS    P    +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTER A+ ++  +++ V+  H  G++H DL P+ +L+ +  +
Sbjct: 95  MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +   DFGLS    P    +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTER A+ ++  +++ V+  H  G++H DL P+ +L+ +  +
Sbjct: 95  MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +   DFGLS    P    +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTE+ A+ +++ +++ V   H+ G++H DL P+ +L+ ++ +
Sbjct: 99  MQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDE 158
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +   DFGLS      +  +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 159 ESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 208

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+ +Y+E  A+  ++ I+E V  CH +G++H DL P+ +L  +K K  ++K 
Sbjct: 88  GELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 67  IDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++  +  +Q +    G+  Y++ EVL+++ YG  VD+W+
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+ +Y+E  A+  ++ I+E V  CH +G++H DL P+ +L  +K K  ++K 
Sbjct: 88  GELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 67  IDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++  +  +Q +    G+  Y++ EVL+++ YG  VD+W+
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTER A+ ++  +++ V+  H  G++H DL P+ +L+ +  +
Sbjct: 95  MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 154
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +   DFGLS    P    +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+ +Y+E  A+  ++ I+E V  CH+ GV+H DL P+ +L  +K K  ++K 
Sbjct: 88  GELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 67  IDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++  +  +Q +    G+  Y++ EVL++  YG  VD+W+
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWA 191

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+ +Y+E  A+  ++ I+E V  CH+ GV+H DL P+ +L  +K K  ++K 
Sbjct: 106 GELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKL 165
Query: 67  IDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++     +Q +    G+  Y++ EVL+++ YG  VD+W+
Sbjct: 166 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWA 209

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL +RI  K H++E  A+ +M+ +V  V   H  GV+H DL P+ +LF ++  
Sbjct: 85  MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144
Query: 61  SFSLKAIDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           +  +K IDFG +    P  Q       +L+Y A E+L +N Y    D+WS+
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L   GEL + IVA+ +Y+E  A+  ++ I+E V  CH+ GV+H +L P+ +L  +K K  
Sbjct: 91  LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 63  SLKAIDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
           ++K  DFGL++     +Q +    G+  Y++ EVL+++ YG  VD+W+
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWA 198

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRI+ +G YTE+ A+ V++ ++  V+  H++G++H DL P+ +L++  ++
Sbjct: 85  MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEE 144
Query: 61  SFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           +  +   DFGLS      EQ    +   G+  Y+A EVL ++ Y   VD WS+
Sbjct: 145 NSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL + IVA+ +Y+E  A+  +  I+E V   H+H ++H DL P+ +L  +K K  ++K 
Sbjct: 115 GELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 67  IDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL++  +  +Q +    G+  Y++ EVL+++ YG  VD+W+
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWA 218

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L  +GEL D +  K   +E+   ++M++++E V   H + ++H DL P+ IL      + 
Sbjct: 181 LMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNM 237
Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWS 108
            ++  DFG S    P E+  EL G+  Y+A E+LK         YG EVD+W+
Sbjct: 238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 92  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +E  GS  Y A E+   K+  GPEVDVWS+
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 92  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 151
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +          E   + YY+A EVL    Y    D+WS+
Sbjct: 152 RPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L ++GEL D +  K   +E+    +M+ ++EV+   HK  ++H DL P+ IL  +     
Sbjct: 92  LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---DM 148
Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWS 108
           ++K  DFG S    P E+  E+ G+  Y+A E+++         YG EVD+WS
Sbjct: 149 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L ++GEL D +  K   +E+    +M+ ++EV+   HK  ++H DL P+ IL  +     
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---DM 161
Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWS 108
           ++K  DFG S    P E+  E+ G+  Y+A E+++         YG EVD+WS
Sbjct: 162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 93  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL---DG 149
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 150 DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 200

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 92  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 92  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           E+V R  A   Y+E VA+  M+ I+E ++ CH + ++H D+ P+ +L  +K+ S  +K  
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLG 175
Query: 68  DFGLSVFFRPREQFNE-------LVGSLYYMALEVLKRN-YGPEVDVWS 108
           DFG+++      Q  E        VG+ ++MA EV+KR  YG  VDVW 
Sbjct: 176 DFGVAI------QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 92  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  E GEL  RI  +G   +TER AA +M+ I   +Q  H H + H D+ P+ +L+ +K
Sbjct: 86  MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK 145
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           +K   LK  DFG +     +        + YY+A EVL    Y    D+WS+
Sbjct: 146 EKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 98  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 157
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 158 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 209

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 2   KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
           +L + GEL+D+I+ +  ++ER A+AV+ TI + V+  H  GV+H DL P  IL+V++  +
Sbjct: 96  ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
Query: 62  -FSLKAIDFGLSVFFRPREQFNELVGSLY---YMALEVLKRN-YGPEVDVWSM 109
             S++  DFG +   R       L+   Y   ++A EVL+R  Y    D+WS+
Sbjct: 156 PESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSL 206

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 99  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 158
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 159 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 210

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 92  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 151
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 152 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 203

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 100 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 159
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 160 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 93  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 152
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 153 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 204

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 85  MEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 141
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 142 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 192

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 94  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 153
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 154 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A +  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 90  MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DA 146
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   GS  Y A E+   K+  GPEVDVWS+
Sbjct: 147 DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 197

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  E GEL  RI  +G   +TER AA +M+ I   +Q  H H + H D+ P+ +L+ +K
Sbjct: 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK 164
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVG---SLYYMALEVL-KRNYGPEVDVWSM 109
           +K   LK  DFG    F      N L     + YY+A EVL    Y    D+WS+
Sbjct: 165 EKDAVLKLTDFG----FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 2   KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
           +L + GEL+D+I+ +  ++ER A+AV+ TI + V+  H  GV+H DL P  IL+V++  +
Sbjct: 96  ELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
Query: 62  -FSLKAIDFGLSVFFRPREQFNELVGSLYY----MALEVLKRN-YGPEVDVWSM 109
             S++  DFG +   R     N L+ +  Y    +A EVL+R  Y    D+WS+
Sbjct: 156 PESIRICDFGFAKQLRAE---NGLLXTPCYTANFVAPEVLERQGYDAACDIWSL 206

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 92  MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DA 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   G+  Y A E+   K+  GPEVDVWS+
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 3   LCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF 62
           L ++GEL D +  K   +E+    +M+ ++EV+   HK  ++H DL P+ IL  +     
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---DM 161
Query: 63  SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWS 108
           ++K  DFG S    P E+   + G+  Y+A E+++         YG EVD+WS
Sbjct: 162 NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL D I   G   E  A  + + I+  V  CH+H V+H DL P+ +L      
Sbjct: 90  MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DA 146
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWS 108
             + K  DFGLS      E   +  GS  Y A EV+  R Y GPEVD+WS
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWS 196

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A +  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 93  MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DA 149
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
             ++K  DFG S  F    + +   G+  Y A E+   K+  GPEVDVWS+
Sbjct: 150 DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D IV K   TE       + I+  ++ CH+H ++H DL P+ +L      + ++K 
Sbjct: 93  GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKI 149
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            DFGLS             GS  Y A EV+  K   GPEVDVWS
Sbjct: 150 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS 193

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GE+ D +VA G   E+ A A  + IV  VQ CH+  ++H DL  + +L        ++K 
Sbjct: 98  GEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADXNIKI 154
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            DFG S  F    + +   G+  Y A E+   K+  GPEVDVWS+
Sbjct: 155 ADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL D I   G   E+ +  + + I+  V  CH+H V+H DL P+ +L      
Sbjct: 95  MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DA 151
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWS 108
             + K  DFGLS      E      GS  Y A EV+  R Y GPEVD+WS
Sbjct: 152 HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWS 201

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 108 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 167
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 168 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL D I   G   E  A  + + I+  V  CH+H V+H DL P+ +L      
Sbjct: 90  MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DA 146
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWS 108
             + K  DFGLS      E      GS  Y A EV+  R Y GPEVD+WS
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS 196

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           EL D IV +   +E+ A    + I+  V+ CH+H ++H DL P+ +L     +  ++K  
Sbjct: 99  ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIA 155
Query: 68  DFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           DFGLS             GS  Y A EV+  K   GPEVDVWS
Sbjct: 156 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 198

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           EL D IV +   +E+ A    + I+  V+ CH+H ++H DL P+ +L     +  ++K  
Sbjct: 98  ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIA 154
Query: 68  DFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           DFGLS             GS  Y A EV+  K   GPEVDVWS
Sbjct: 155 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 197

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 197
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 198 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
            EL D IV +   +E+ A    + I+  V+ CH+H ++H DL P+ +L     +  ++K 
Sbjct: 88  NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKI 144
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            DFGLS             GS  Y A EV+  K   GPEVDVWS
Sbjct: 145 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 188

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           EL D IV +   +E+ A    + I+  V+ CH+H ++H DL P+ +L     +  ++K  
Sbjct: 93  ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIA 149
Query: 68  DFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           DFGLS             GS  Y A EV+  K   GPEVDVWS
Sbjct: 150 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 192

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 144 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 203
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 204 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 94  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 153
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 154 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 2   KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
           +L   GEL+D+I+ +  ++ER A+ V+ TI + V+  H  GV+H DL P  IL+V++  +
Sbjct: 101 ELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 62  FS-LKAIDFGLSVFFRPREQFNELVGSLY---YMALEVLKRN-YGPEVDVWSM 109
              L+  DFG +   R       L+   Y   ++A EVLKR  Y    D+WS+
Sbjct: 161 PECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLKRQGYDEGCDIWSL 211

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 2   KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
           +L   GEL+D+I+ +  ++ER A+ V+ TI + V+  H  GV+H DL P  IL+V++  +
Sbjct: 101 ELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 62  FS-LKAIDFGLSVFFRPREQFNELVGSLY---YMALEVLKR-NYGPEVDVWSM 109
              L+  DFG +   R       L+   Y   ++A EVLKR  Y    D+WS+
Sbjct: 161 PECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLKRQGYDEGCDIWSL 211

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 105 MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 163
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 164 ---VKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSL 211

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 107 MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 165
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 166 ---VKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSL 213

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 100 MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 158
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 159 ---VKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPYGPEVDIWSL 206

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 150 MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 208
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 209 ---VKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSL 256

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           E+V R  A   Y+E VA+  M+ I+E ++ CH + ++H D+ P  +L  +K+ S  +K  
Sbjct: 118 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG 177
Query: 68  DFGLSVFFRPREQFNE-------LVGSLYYMALEVLKRN-YGPEVDVWS 108
            FG+++      Q  E        VG+ ++MA EV+KR  YG  VDVW 
Sbjct: 178 GFGVAI------QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 220

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 96  MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 154
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 155 ---VKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPYGPEVDIWSL 202

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           E+V R  A   Y+E VA+  M+ I+E ++ CH + ++H D+ P  +L  +K+ S  +K  
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG 175
Query: 68  DFGLSVFFRPREQFNE-------LVGSLYYMALEVLKRN-YGPEVDVWS 108
            FG+++      Q  E        VG+ ++MA EV+KR  YG  VDVW 
Sbjct: 176 GFGVAI------QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   AAV   +++ + V H  GV+H D+    IL  +  +
Sbjct: 227 MEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 285
Query: 61  SFSLKAIDFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG         PR +   LVG+ Y+MA E++ R  YGPEVD+WS+
Sbjct: 286 ---VKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPYGPEVDIWSL 333

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+  + GEL DRI+ + +  TE      MK I E ++  H+  ++H DL P+ IL VN+ 
Sbjct: 165 MEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD 224
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNY-GPEVDVWSM 109
               +K IDFGL+  ++PRE+     G+  ++A EV+  ++     D+WS+
Sbjct: 225 AK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 7   GELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL 64
           GEL  RI  +G   +TER A+ + K+I E +Q  H   + H D+ P+ +L+ +K+ +  L
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL 203
Query: 65  KAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
           K  DFG +              + YY+A EVL    Y    D WS+
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL        S+K 
Sbjct: 102 GSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKL 157
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG      P + + +E+VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 158 TDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 232 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 291
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 292 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 344

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 93  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 93  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 92  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 151
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 152 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 204

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 93  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 99  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 158
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 159 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 211

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 218 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           E++ + +M+ I   +   H  G+ H D+ P+  LF +  KSF +K +DFGLS  F     
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNN 225
Query: 81  -----FNELVGSLYYMALEVL---KRNYGPEVDVWS 108
                     G+ Y++A EVL     +YGP+ D WS
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 82  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 140
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 141 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 142
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 143 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 83  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD- 141
Query: 61  SFSLKAIDFGLSVFFR--PREQ-FNELVGSLYYMALEVLKRN--YGPEVDVWS 108
             +LK  DFGL+  FR   RE+  N++ G+L Y+A E+LKR   +   VDVWS
Sbjct: 142 --NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 153
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
            +  +K IDFG++       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL        S+K 
Sbjct: 102 GSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKL 157
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 158 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL        S+K 
Sbjct: 103 GSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKL 158
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 159 TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL        S+K 
Sbjct: 102 GSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKL 157
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 158 TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 108 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 167
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
            +  +K IDFG++       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 168 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 218

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 87  LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
            +  +K IDFG++       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 147 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 197

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 1   MKLCEEGELVDRIVAKG-----HYTERVAAAVMKTIVEVVQVCHK-----HGVMHHDLNP 50
           M+ CE G+L   ++ KG     +  E     VM  +   ++ CH+     H V+H DL P
Sbjct: 86  MEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 51  KKILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKR-NYGPEVDVWS 108
             +    K+   ++K  DFGL+      E F  E VG+ YYM+ E + R +Y  + D+WS
Sbjct: 145 ANVFLDGKQ---NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 109 M 109
           +
Sbjct: 202 L 202

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 94  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 153
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           + +  LK  DFG                     A E     Y    D+WS+
Sbjct: 154 RPNAILKLTDFGF--------------------AKETTGEKYDKSCDMWSL 184

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  +++ +  CH  G+MH D+ P  ++  +++K   L+ ID+GL+ F+ P +++N  V S
Sbjct: 138 MYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVAS 195
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 196 RYFKGPELLVDYQMYDYSLDMWSL 219

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E G L D IV      E   A V  +++  +   H  GV+H D+    IL  +  +
Sbjct: 121 MEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR 179
Query: 61  SFSLKAIDFGL-SVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              +K  DFG  +   +   +   LVG+ Y+MA EV+ R  YG EVD+WS+
Sbjct: 180 ---IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSL 227

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  +++ +  CH  G+MH D+ P  ++  +++K   L+ ID+GL+ F+ P +++N  V S
Sbjct: 143 MYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVAS 200
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 201 RYFKGPELLVDYQMYDYSLDMWSL 224

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D +V +    E   AAV +  ++ ++  H + V+H ++    IL        S+K 
Sbjct: 103 GSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL---GMDGSVKL 158
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG      P + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 159 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 204

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE 79
           E +  ++    ++ V  CHKH  +H D+ P+ IL     K   +K  DFG +     P +
Sbjct: 101 EHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSD 157
Query: 80  QFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            +++ V + +Y + E+L     YGP VDVW++
Sbjct: 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAI 189

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  +L  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 142 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 199
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 200 RYFKGPELLVDYQMYDYSLDMWSL 223

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 193
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 194 RYFKGPELLVDYQMYDYSLDMWSL 217

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 193
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 194 RYFKGPELLVDYQMYDYSLDMWSL 217

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  + G L D IV++    E   A V + +++ +   H  GV+H D+    IL     +
Sbjct: 121 MEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR 179
Query: 61  SFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG      +   +   LVG+ Y+MA EV+ R+ Y  EVD+WS+
Sbjct: 180 ---VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSL 227

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 135 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 192
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 193 RYFKGPELLVDYQMYDYSLDMWSL 216

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  I++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 88  LYYMALEVL--KRNYGPEVDVWSM 109
            Y+   E+L   + Y   +D+WS+
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSL 218

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 1   MKLCEEGE----LVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           +++C  GE    L +R+     ++E  A   M  I+  +   H HG++H DL    +L  
Sbjct: 90  LEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT 146
Query: 57  NKKKSFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              ++ ++K  DFGL+   + P E+   L G+  Y++ E+  R+ +G E DVWS+
Sbjct: 147 ---RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 92  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 202

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 92  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 202

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 194 KGPELLVDLQDYDYSLDMWSL 214

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 193 KGPELLVDLQDYDYSLDMWSL 213

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 1   MKLCEEGELVDRIVAKG-----HYTERVAAAVMKTIVEVVQVCHK-----HGVMHHDLNP 50
           M+ CE G+L   ++ KG     +  E     VM  +   ++ CH+     H V+H DL P
Sbjct: 86  MEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 51  KKILFVNKKKSFSLKAIDFGLSVFFRPREQFNE-LVGSLYYMALEVLKR-NYGPEVDVWS 108
             +    K+   ++K  DFGL+        F +  VG+ YYM+ E + R +Y  + D+WS
Sbjct: 145 ANVFLDGKQ---NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 109 M 109
           +
Sbjct: 202 L 202

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 213 KGPELLVDLQDYDYSLDMWSL 233

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 193 KGPELLVDLQDYDYSLDMWSL 213

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 1   MKLCEEGELVDRIVAKG-----HYTERVAAAVMKTIVEVVQVCHK-----HGVMHHDLNP 50
           M+ CE G+L   ++ KG     +  E     VM  +   ++ CH+     H V+H DL P
Sbjct: 86  MEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 51  KKILFVNKKKSFSLKAIDFGLSVFFRPREQFNE-LVGSLYYMALEVLKR-NYGPEVDVWS 108
             +    K+   ++K  DFGL+        F +  VG+ YYM+ E + R +Y  + D+WS
Sbjct: 145 ANVFLDGKQ---NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 109 M 109
           +
Sbjct: 202 L 202

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL   +   G + E+ +A  M+ + + +  CH+  V+H D+ P+ +L   K +
Sbjct: 94  LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE 153
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVW 107
              LK  DFG SV   P  +   + G+L Y+  E+++ + +  +VD+W
Sbjct: 154 ---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL   +   G + E+ +A  M+ + + +  CH+  V+H D+ P+ +L   K +
Sbjct: 93  LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVW 107
              LK  DFG SV   P  +   + G+L Y+  E+++ + +  +VD+W
Sbjct: 153 ---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 7   GELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK 65
           GEL DRI A+ +  +E      M+   E ++  H+H ++H D+ P+ I+   KK S S+K
Sbjct: 133 GELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS-SVK 191
Query: 66  AIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            IDFGL+    P E       +  + A E++ R   G   D+W++
Sbjct: 192 IIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +++ +  CH  G+MH D+ P  ++  ++ +   L+ ID+GL+ F+ P +++N  V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 91  MALEVL--KRNYGPEVDVWSM 109
              E+L   ++Y   +D+WS+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSL 212

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 2   KLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-K 60
           +L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++   
Sbjct: 94  ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP 153
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
              +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV--NYEPLGLEADMWSI 203

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++  NY P   E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSI 203

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF--VNKKKSFSLKAIDFGLS-VFFRPR 78
           RV  + +  ++  V  CH    +H DL P+ +L    +  ++  LK  DFGL+  F  P 
Sbjct: 132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 79  EQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            QF   + +L+Y   E+L   R+Y   VD+WS+
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   V H DL  +  L ++   
Sbjct: 94  MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL-LDGSP 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNY-GPEVDVWS 108
           +  LK  DFG S       Q    VG+  Y+A EV LK+ Y G   DVWS
Sbjct: 153 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWS 202

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   V H DL  +  L ++   
Sbjct: 93  MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL-LDGSP 151
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNY-GPEVDVWS 108
           +  LK  DFG S       Q    VG+  Y+A EV LK+ Y G   DVWS
Sbjct: 152 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWS 201

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH++ ++H DL P+ +L +NK+    LK  DFGL+  F  P   F+  V +L+
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLL-INKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 90  YMALEVL--KRNYGPEVDVWS 108
           Y A +VL   R Y   +D+WS
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWS 194

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 10  VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF 69
           +D++   G  TE +   +M  ++  +   H H V+H DL P+ IL  +   S  +K  DF
Sbjct: 109 LDKVPEPGVPTETIKD-MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADF 164
Query: 70  GLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
           GL+  +  +     +V +L+Y A EV L+ +Y   VD+WS+
Sbjct: 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 10  VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF 69
           +D++   G  TE +   +M  ++  +   H H V+H DL P+ IL  +   S  +K  DF
Sbjct: 109 LDKVPEPGVPTETIKD-MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADF 164
Query: 70  GLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
           GL+  +  +     +V +L+Y A EV L+ +Y   VD+WS+
Sbjct: 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 10  VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF 69
           +D++   G  TE +   +M  ++  +   H H V+H DL P+ IL  +   S  +K  DF
Sbjct: 109 LDKVPEPGVPTETIKD-MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADF 164
Query: 70  GLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
           GL+  +  +     +V +L+Y A EV L+ +Y   VD+WS+
Sbjct: 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 25/127 (19%)
Query: 1   MKLCEEGELVD---RIVAKGHY-----TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKK 52
           MKL   G ++D    IVAKG +      E   A +++ ++E ++  HK+G +H D+    
Sbjct: 92  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 53  ILFVNKKKSFSLKAIDFGLSVFF---------RPREQFNELVGSLYYMALEVLK--RNYG 101
           IL     +  S++  DFG+S F          + R+ F   VG+  +MA EV++  R Y 
Sbjct: 152 ILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTF---VGTPCWMAPEVMEQVRGYD 205
Query: 102 PEVDVWS 108
            + D+WS
Sbjct: 206 FKADIWS 212

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 7   GELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL 64
           GEL ++ VA  H   +E  A   M+ + + +   H++  +H DL P+ I+F  K+ S  L
Sbjct: 239 GELFEK-VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNEL 296
Query: 65  KAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           K IDFGL+    P++      G+  + A EV + +  G   D+WS+
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 1   MKLCEEGELVD---RIVAKGHY-----TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKK 52
           MKL   G ++D    IVAKG +      E   A +++ ++E ++  HK+G +H D+    
Sbjct: 87  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 53  ILFVNKKKSFSLKAIDFGLSVFFRPREQFNE------LVGSLYYMALEVLK--RNYGPEV 104
           IL     +  S++  DFG+S F                VG+  +MA EV++  R Y  + 
Sbjct: 147 ILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 203
Query: 105 DVWS 108
           D+WS
Sbjct: 204 DIWS 207

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL 96
           CH+H ++H DL P+ +L        +LK  DFGL+  F  P   +   V +L+Y A +VL
Sbjct: 135 CHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 97  --KRNYGPEVDVWSM 109
              + Y   VD+WS+
Sbjct: 192 MGSKKYSTSVDIWSI 206

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   + H DL  +  L ++   
Sbjct: 95  MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL-LDGSP 153
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNY--GPEVDVWS 108
           +  LK  DFG S       Q    VG+  Y+A EVL R    G   DVWS
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWS 203

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL 96
           CH+H ++H DL P+ +L        +LK  DFGL+  F  P   +   V +L+Y A +VL
Sbjct: 135 CHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 97  --KRNYGPEVDVWSM 109
              + Y   VD+WS+
Sbjct: 192 MGSKKYSTSVDIWSI 206

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQ 80
           +V    +  I+  +  CH H ++H D+ P+ IL     +S  +K  DFG +     P E 
Sbjct: 124 QVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEV 180
Query: 81  FNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
           +++ V + +Y A E+L  +  YG  VDVW++
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G ++  I  + H+ ER A+ V++ +   +   H  G+ H DL P+ IL  + +K   +K 
Sbjct: 96  GSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKI 155
Query: 67  IDFGLSVFFR--------PREQFNELVGSLYYMALEVLK------RNYGPEVDVWSM 109
            DF L    +           +     GS  YMA EV++        Y    D+WS+
Sbjct: 156 CDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSL 212

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 7   GELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK 65
           GEL +++  +    +E  A   M+ + + +   H++  +H DL P+ I+F  K+ S  LK
Sbjct: 133 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELK 191
Query: 66  AIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            IDFGL+    P++      G+  + A EV + +  G   D+WS+
Sbjct: 192 LIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 236

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  EL G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 14  VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS- 72
           V +G      A + +  ++  +  CH   V+H DL P+ +L     +   LK  DFGL+ 
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLAR 148
Query: 73  VFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            F  P  ++   V +L+Y A +VL   + Y   +D+WS+
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 1   MKLCEEGELVDRIVAK-GHYTERVAA-AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C++G L   I  + G   ++V A  + + I + V   H   ++H DL P  I  V+ 
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALE-VLKRNYGPEVDVWSM 109
           K+   +K  DFGL    +   +     G+L YM+ E +  ++YG EVD++++
Sbjct: 173 KQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   V H DL  +  L ++   
Sbjct: 94  MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL-LDGSP 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNY-GPEVDVWS 108
           +  LK   FG S       Q  + VG+  Y+A EV LK+ Y G   DVWS
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWS 202

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 90  YMALEVL--KRNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSL 190

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 14  VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS- 72
           V +G      A + +  ++  +  CH   V+H DL P+ +L     +   LK  DFGL+ 
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLAR 148
Query: 73  VFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            F  P  ++   V +L+Y A +VL   + Y   +D+WS+
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 175
Query: 90  YMALEVL--KRNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSL 197

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GE+   +     + E+  A  +  +   +  CH   V+H D+ P+ +L  +   
Sbjct: 92  LEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--- 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +  LK  DFG SV   P  +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 149 AGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PS 186
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            + ++L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 187 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 218

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 14  VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS- 72
           V +G      A + +  ++  +  CH   V+H DL P+ +L     +   LK  DFGL+ 
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLAR 148
Query: 73  VFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            F  P  ++   + +L+Y A +VL   + Y   +D+WS+
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V   H   V H DL  +  L ++   
Sbjct: 94  MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTL-LDGSP 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNY-GPEVDVWS 108
           +  LK  DFG S       Q    VG+  Y+A EV LK+ Y G   DVWS
Sbjct: 153 APRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWS 202

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +   LK  DFG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            + ++L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GE+   +     + E+  A  +  +   +  CH   V+H D+ P+ +L  +   
Sbjct: 92  LEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--- 148
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +  LK  DFG SV   P  +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 149 AGELKIADFGWSVHA-PSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 169
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSL 191

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   V H DL  +  L ++   
Sbjct: 94  MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL-LDGSP 152
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNY-GPEVDVWS 108
           +  LK   FG S       Q    VG+  Y+A EV LK+ Y G   DVWS
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWS 202

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 175
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSL 197

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 161
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  +L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  +L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 165
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  +L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYTHEVVTLW 172
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSL 194

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  +L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +   LK  DFG SV   P 
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPS 164
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            + + L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 165 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           E +A+ + + +V  V       ++H D+  + I+     + F++K IDFG + +    + 
Sbjct: 129 EPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKL 185
Query: 81  FNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
           F    G++ Y A EVL  N   GPE+++WS+
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE 79
            ER   + +  + E +Q  H H + H D+ P+ I++  ++ S ++K I+FG +   +P +
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS-TIKIIEFGQARQLKPGD 158
Query: 80  QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            F  L  +  Y A EV + +      D+WS+
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGE---LKL 152
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 161
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            + + L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 193

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSL 192

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSL 191

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSL 192

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSL 192

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 167
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSL 189

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSL 191

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 172
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSL 194

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 1   MKLCEEGELVDRIV-AKGHY-TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G + D I   KG+   E   A + + I+  +   H+H V+H D+  + +L    
Sbjct: 106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-- 163
Query: 59  KKSFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRNYGPEV------DVWSM 109
            ++  +K +DFG+S    R   + N  +G+ Y+MA EV+  +  P+       D+WS+
Sbjct: 164 -ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 90  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 146
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S      E  NE VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 147 IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSM 192

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSL 191

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +   LK  DFG SV   P 
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPS 164
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSL 193

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 30  TIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLY 89
           +I++ +   HK+ ++H DL P+ IL   + +S  +K IDFG S +    ++    + S +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRS-GIKVIDFGSSCY--EHQRVYTXIQSRF 264
Query: 90  YMALEV-LKRNYGPEVDVWSM 109
           Y A EV L   YG  +D+WS+
Sbjct: 265 YRAPEVILGARYGMPIDMWSL 285

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSL 190

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 191
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 192 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 185
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 185
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PS 165
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E ++ R +  +VD+WS+
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSL 197

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 184
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSL 192

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE 79
           +E     ++K I+E V   H++ ++H DL P+ IL  +      +K +DFG+S       
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188
Query: 80  QFNELVGSLYYMALEVLKRNYGP---EVDVWSM 109
           +  E++G+  Y+A E+L  NY P     D+W++
Sbjct: 189 ELREIMGTPEYLAPEIL--NYDPITTATDMWNI 219

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLY 89
           +++ +  CH H V+H DL P+ +L +N +   ++K  DFGL+  F  P   +   V +L+
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLL-INTEG--AIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 90  YMALEVLK--RNYGPEVDVWSM 109
           Y A E+L   + Y   VD+WS+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSL 191

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 199
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 152
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 172
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 185
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 184
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 184
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 171
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 172 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 185
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 179
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 180 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 223

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 157
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G ++  I  + H+ E  A+ V++ +   +   H  G+ H DL P+ IL  +  +   +K 
Sbjct: 96  GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 67  IDFGLSVFFRPREQFNEL--------VGSLYYMALEVLK------RNYGPEVDVWSM 109
            DFGL    +     + +         GS  YMA EV++        Y    D+WS+
Sbjct: 156 CDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 184
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 157
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 172
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 199
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 156
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 157 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 157
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 30  TIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLY 89
           +I++ +   HK+ ++H DL P+ IL   + +S  +K IDFG S +    ++    + S +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRS-GIKVIDFGSSCY--EHQRVYTXIQSRF 264
Query: 90  YMALEV-LKRNYGPEVDVWSM 109
           Y A EV L   YG  +D+WS+
Sbjct: 265 YRAPEVILGARYGMPIDMWSL 285

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 171
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 172 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 165
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 30  TIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLY 89
           +I++ +   HK+ ++H DL P+ IL   + +S  +K IDFG S +    ++    + S +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRS-GIKVIDFGSSCY--EHQRVYXXIQSRF 264
Query: 90  YMALEV-LKRNYGPEVDVWSM 109
           Y A EV L   YG  +D+WS+
Sbjct: 265 YRAPEVILGARYGMPIDMWSL 285

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 172
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 96  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 152
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 122 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PS 177
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 209

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 99  DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 155
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 156 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 199

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 199
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 156
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 157 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PS 186
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 218

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 104 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 159
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 191

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +   LK  DFG SV   P 
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPS 164
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +   LK  DFG SV   P 
Sbjct: 102 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPS 157
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 189

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 162
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL 194

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 160
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 112 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 168
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 169 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 108 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 164
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF-VNKKKSFSLKA 66
           +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL  +N+ +   LK 
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKL 204
Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           IDFG     +    + +  G+  Y   E ++  R +G    VWS+
Sbjct: 205 IDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +++C    L++    +   TE  A   M+  ++ VQ  H + V+H DL     LF+N   
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLND-- 177
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+  +L G+  Y+A EVL K+ +  EVD+WS+
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +++C    L++    +   TE  A   M+  ++ VQ  H + V+H DL     LF+N   
Sbjct: 105 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLND-- 161
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+  +L G+  Y+A EVL K+ +  EVD+WS+
Sbjct: 162 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 212

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 114 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 170
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 171 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 93  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 149
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 150 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 112 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 168
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 169 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 116 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 172
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 173 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-RPREQFNEL 84
           A M   ++ ++  H+H ++H DL P  +L     ++  LK  DFGL+  F  P   +   
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 85  VGSLYYMALEVL--KRNYGPEVDVWSM 109
           V + +Y A E+L   R YG  VD+W++
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAV 199

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 108 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 164
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 86  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 142
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 143 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 1   MKLCEEGEL---VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+ CE G+L   +++        E     ++  I   ++  H++ ++H DL P+ I+   
Sbjct: 98  MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 157
Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWS 108
             +    K ID G +      E   E VG+L Y+A E+L ++ Y   VD WS
Sbjct: 158 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 209

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 1   MKLCEEGEL---VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+ CE G+L   +++        E     ++  I   ++  H++ ++H DL P+ I+   
Sbjct: 97  MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 156
Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWS 108
             +    K ID G +      E   E VG+L Y+A E+L ++ Y   VD WS
Sbjct: 157 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 190 GTVNYMPPEAIK 201

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 89  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 145
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 146 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 87  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 143
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 190 GTVNYMPPEAIK 201

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 174 GTVNYMPPEAIK 185

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 170 GTVNYMPPEAIK 181

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 88  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 144
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 145 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M+  +  +   H + ++H DL P+ IL  +     ++K  DFGL+  +  +   + +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG---TVKLADFGLARIYSYQMALDPVVV 173
Query: 87  SLYYMALEV-LKRNYGPEVDVWSM 109
           +L+Y A EV L+  Y   VD+WS+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  +FG SV   P 
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIANFGWSV-HAPS 162
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 194

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  DFG S    P 
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSC-HAPS 161
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19  YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR 78
           + E+  A  +  +   +  CH   V+H D+ P+ +L  +   +  LK  +FG SV   P 
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIANFGWSV-HAPS 163
Query: 79  EQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 86  GSLYYMALEVLK-----RNYG-------PEVDVWSM 109
           G++ YM  E +K     R  G       P+ DVWS+
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +++C    L++    +   TE  A   M+  ++ VQ  H + V+H DL     LF+N   
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLND-- 177
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVD+WS+
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 10  VDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDF 69
           +D+    G   E +   +M+  +  +   H + ++H DL P+ IL  +     ++K  DF
Sbjct: 109 LDKAPPPGLPAETIKD-LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG---TVKLADF 164
Query: 70  GLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
           GL+  +  +     +V +L+Y A EV L+  Y   VD+WS+
Sbjct: 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSV 205

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +++C    L++    +   TE  A   M+  ++ VQ  H + V+H DL     LF+N   
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLND-- 177
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVD+WS+
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           +L D I  KG   E  +      +V  +Q CH  GV+H D+  + IL ++ ++  + K I
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENIL-IDLRRGCA-KLI 182
Query: 68  DFGLSVFFRPREQFNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
           DFG        E + +  G+  Y   E + R+  +     VWS+
Sbjct: 183 DFGSGALLH-DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSL 225

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 218 GTVNYMPPEAIK 229

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 218 GAVNYMPPEAIK 229

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G ++  I  + H+ E  A+ V++ +   +   H  G+ H DL P+ IL  +  +   +K 
Sbjct: 96  GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 67  IDFGLSVFFRPREQFNEL--------VGSLYYMALEVLK------RNYGPEVDVWSM 109
            DF L    +     + +         GS  YMA EV++        Y    D+WS+
Sbjct: 156 CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29  KTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELV 85
           K ++E V   H+HG++H DL P   L V+      LK IDFG++   +P       +  V
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 86  GSLYYMALEVLK 97
           G++ YM  E +K
Sbjct: 171 GTVNYMPPEAIK 182

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 96  LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 152
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 96  LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 152
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 100 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 156
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 207

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M+  +  +   H + ++H DL P+ IL  +     ++K  DFGL+  +  +     +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG---TVKLADFGLARIYSYQMALAPVVV 173
Query: 87  SLYYMALEV-LKRNYGPEVDVWSM 109
           +L+Y A EV L+  Y   VD+WS+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 143
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 149 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 205
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 206 IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 251

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV-FFRPR 78
           TE     V K  ++ +   H + ++H DL    ILF        +K  DFG+S    R  
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTI 189
Query: 79  EQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
           ++ +  +G+ Y+MA EV+       R Y  + DVWS+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 114 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 170
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 171 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF------RPREQ 80
           VM+ ++  +   H++ ++H D+    +L     +   LK  DFGL+  F      +P   
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVW 107
            N +V +L+Y   E+L  +R+YGP +D+W
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLW 214

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 143
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 143
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF------RPREQ 80
           VM+ ++  +   H++ ++H D+    +L     +   LK  DFGL+  F      +P   
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            N +V +L+Y   E+L  +R+YGP +D+W 
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWG 215

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 143
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 106 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 162
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 163 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 208

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 6   EGELVDRIVAK-GHYTERVAAAVMKTIVE-VVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           +G  +D+++ K G   E++   V   +++ +  +  KH +MH D+ P  IL VN +    
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRG--E 143
Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF------RPREQ 80
           VM+ ++  +   H++ ++H D+    +L     +   LK  DFGL+  F      +P   
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            N +V +L+Y   E+L  +R+YGP +D+W 
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWG 215

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + G L+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 111 LSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 167
Query: 61  SFSLKAIDFGLSVFFRP---REQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              ++  DFG +    P   + + N  VG+  Y++ E+L +++     D+W++
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF------RPREQ 80
           VM+ ++  +   H++ ++H D+    +L     +   LK  DFGL+  F      +P   
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            N +V +L+Y   E+L  +R+YGP +D+W 
Sbjct: 186 XNRVV-TLWYRPPELLLGERDYGPPIDLWG 214

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           + + V+  H + + H DL P+ ILFVN                  KS +++ +DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E  + +V + +Y A EV L+  +    DVWS+
Sbjct: 206 --DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSI 239

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV-FFRPR 78
           TE     V K  ++ +   H + ++H DL    ILF        +K  DFG+S    R  
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRXI 189
Query: 79  EQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
           ++ +  +G+ Y+MA EV+       R Y  + DVWS+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 94  LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 150
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 27  VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVG 86
           +M+  +  +   H + ++H DL P+ IL  +     ++K  DFGL+  +  +     +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG---TVKLADFGLARIYSYQMALFPVVV 173
Query: 87  SLYYMALEV-LKRNYGPEVDVWSM 109
           +L+Y A EV L+  Y   VD+WS+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV-FFRPR 78
           TE     V K  ++ +   H + ++H DL    ILF        +K  DFG+S    R  
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRXI 189
Query: 79  EQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
           ++ +  +G+ Y+MA EV+       R Y  + DVWS+
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 118 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 174
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 175 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 225

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 16  KGHYTERVAAAVMKTIVEVVQ-VCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF 74
           +G   ER+   +   IV+ +  +  KHGV+H D+ P  IL   + +   +K  DFG+S  
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ---IKLCDFGISGR 174
Query: 75  FRPREQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
               +  +   G   YMA E +      K +Y    DVWS+
Sbjct: 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 15  AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-V 73
             G     +  + +  +++ +  CH   V+H DL P+ +L     ++  LK  DFGL+  
Sbjct: 94  CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARA 150
Query: 74  FFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           F  P   ++  V +L+Y   +VL   + Y   +D+WS
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N  +
Sbjct: 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLN--E 176
Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              +K  DFGL+       E+   L G+  Y+A EVL K+ +  EVDVWS+
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYAANVDIWSV 211

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           +   V   H  G+ H D+ P+ +L VN K + +LK  DFG +    P E     + S +Y
Sbjct: 150 LFRAVGFIHSLGICHRDIKPQNLL-VNSKDN-TLKLCDFGSAKKLIPSEPSVAXICSRFY 207
Query: 91  MALEVL--KRNYGPEVDVWSM 109
            A E++     Y P +D+WS+
Sbjct: 208 RAPELMLGATEYTPSIDLWSI 228

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 141 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 198 MGYKENVDIWSV 209

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 22  RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF 81
           +V+ AV++ +  + +   KH +MH D+ P  IL VN +    +K  DFG+S         
Sbjct: 118 KVSIAVLRGLAYLRE---KHQIMHRDVKPSNIL-VNSRG--EIKLCDFGVSGQLI-DSMA 170
Query: 82  NELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           N  VG+  YMA E L+  +Y  + D+WSM
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSM 199

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL 96
           CH+  V+H DL P+ +L +N++    LK  DFGL+     P + ++  V +L+Y   ++L
Sbjct: 116 CHRQKVLHRDLKPQNLL-INERG--ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 97  --KRNYGPEVDVWSM 109
               +Y  ++D+W +
Sbjct: 173 LGSTDYSTQIDMWGV 187

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAA-AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ CE G L D I ++    +R     + + I+E +   H  G++H DL P  I F+++ 
Sbjct: 94  MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNI-FIDES 152
Query: 60  KSFSLKAIDFGLSVFFR---------------PREQFNELVGSLYYMALEVLKRN--YGP 102
           +  ++K  DFGL+                     +     +G+  Y+A EVL     Y  
Sbjct: 153 R--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 103 EVDVWSM 109
           ++D++S+
Sbjct: 211 KIDMYSL 217

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 181 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 238 MGYKENVDIWSV 249

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D     G YT        K I+E ++  H + ++H D+    +L      S  LK 
Sbjct: 115 GPLKDNEQTIGFYT--------KQILEGLKYLHDNQIVHRDIKGDNVLI--NTYSGVLKI 164
Query: 67  IDFGLSVFFRPREQFNE-LVGSLYYMALEVLK---RNYGPEVDVWSM 109
            DFG S          E   G+L YMA E++    R YG   D+WS+
Sbjct: 165 SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 20/126 (15%)
Query: 1   MKLCEEGELVDRIVAKGHYTER---VAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+LC +  L D +  +    ER   V   +   I E V+  H  G+MH DL P  I F  
Sbjct: 94  MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153
Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNEL-------------VGSLYYMALEVLKRN-YGPE 103
                 +K  DFGL       E+   +             VG+  YM+ E +  N Y  +
Sbjct: 154 DD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210
Query: 104 VDVWSM 109
           VD++S+
Sbjct: 211 VDIFSL 216

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 144 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 201 MGYKENVDIWSV 212

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G L D     G YT        K I+E ++  H + ++H D+    +L      S  LK 
Sbjct: 101 GPLKDNEQTIGFYT--------KQILEGLKYLHDNQIVHRDIKGDNVLI--NTYSGVLKI 150
Query: 67  IDFGLSVFFRPREQFNE-LVGSLYYMALEVLK---RNYGPEVDVWSM 109
            DFG S          E   G+L YMA E++    R YG   D+WS+
Sbjct: 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 197

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 136 HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 193 MGYKENVDIWSV 204

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 181 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 238 MGYKENVDIWSV 249

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 137 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 194 MGYKENVDIWSV 205

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 144 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 201 MGYKENVDIWSV 212

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           ER++  + + +V +  + H  G++H DL P  I+    K   +LK +DFGL+        
Sbjct: 126 ERMSYLLYQMLVGIKHL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFM 181
Query: 81  FNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               V + YY A EV L   Y   VD+WS+
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSV 211

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL   +     + E+  A +M+ + + +  CH   V+H D+ P+    +    
Sbjct: 102 LEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN---LLLGL 158
Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              LK  DFG SV   P  +   + G+L Y+  E+++ R +  +VD+W +
Sbjct: 159 KGELKIADFGWSVHA-PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCI 207

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 142 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 199 MGYKENVDIWSV 210

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 144 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 201 MGYKENVDIWSV 212

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 137 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 194 MGYKENVDIWSV 205

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 136 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 193 MGYKENVDIWSV 204

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           ER++  + + +V +  + H  G++H DL P  I+    K   +LK +DFGL+        
Sbjct: 126 ERMSYLLYQMLVGIKHL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFM 181
Query: 81  FNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               V + YY A EV L   Y   VD+WS+
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSV 211

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-L 96
            H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 97  KRNYGPEVDVWSM 109
              Y   VD+WS+
Sbjct: 199 GMGYKENVDIWSV 211

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 15  AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-V 73
             G     +  + +  +++ +  CH   V+H DL P+ +L     ++  LK  +FGL+  
Sbjct: 94  CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARA 150
Query: 74  FFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
           F  P   ++  V +L+Y   +VL   + Y   +D+WS
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL 84
           AAV    ++ +   H H ++H D+    IL     +   +K  DFG +    P    N  
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA---NXF 210
Query: 85  VGSLYYMALEVL----KRNYGPEVDVWSM 109
           VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSL 239

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 148 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 205 MGYKENVDLWSV 216

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 137 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 194 MGYKENVDLWSV 205

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 20/126 (15%)
Query: 1   MKLCEEGELVDRIVAKGHYTER---VAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+LC +  L D +  +    +R   V   +   I E V+  H  G+MH DL P  I F  
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199
Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNEL-------------VGSLYYMALEVLK-RNYGPE 103
                 +K  DFGL       E+   +             VG+  YM+ E +   NY  +
Sbjct: 200 DD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHK 256
Query: 104 VDVWSM 109
           VD++S+
Sbjct: 257 VDIFSL 262

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 25  AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL 84
           AAV    ++ +   H H ++H D+    IL     +   +K  DFG +    P    N  
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA---NXF 171
Query: 85  VGSLYYMALEVL----KRNYGPEVDVWSM 109
           VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 145 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 202 MGYKENVDIWSV 213

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDIWSV 211

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSV 234

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  +D ++  G   E   A +++ I++ +   H    +H D+    +L     +   +K 
Sbjct: 110 GSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKL 165
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 166 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  +D ++  G   E   A +++ I++ +   H    +H D+    +L     +   +K 
Sbjct: 90  GSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKL 145
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 146 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  +D ++  G   E   A +++ I++ +   H    +H D+    +L     +   +K 
Sbjct: 105 GSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKL 160
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 161 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  +D ++  G   E   A +++ I++ +   H    +H D+    +L     +   +K 
Sbjct: 90  GSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKL 145
Query: 67  IDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 146 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+    K   +LK +DFGL+            V + YY A EV L 
Sbjct: 143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 98  RNYGPEVDVWSM 109
             Y   VD+WS+
Sbjct: 200 MGYKENVDLWSV 211

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSV 214

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSV 214

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSV 214

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSV 234

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSV 216

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSV 219

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSV 220

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSV 211

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSV 222

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSV 214

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSV 216

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSV 216

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSV 212

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G  +D ++  G   E   A +++ I++ +   H    +H D+    +L   +  
Sbjct: 96  MEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG- 153
Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 154 --DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  ++  +   H  G+ H D+ P+ +L      S  LK IDFG +      E     + S
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 88  LYYMALEVL--KRNYGPEVDVWS 108
            YY A E++    NY   +D+WS
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWS 227

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 26  AVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFGLSVFF----RPREQ 80
           +++  I++ +   H + V+H DL P  IL + +  +   +K  D G +  F    +P   
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 81  FNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
            + +V + +Y A E+L   R+Y   +D+W++
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAI 222

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSV 234

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           +   ++  H++ + H DL P+ ILFVN +                K+ S++  DFG + F
Sbjct: 164 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 223
Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E    +V + +Y   EV L+  +    DVWS+
Sbjct: 224 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 257

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSV 212

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           +   ++  H++ + H DL P+ ILFVN +                K+ S++  DFG + F
Sbjct: 141 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 200
Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E    +V + +Y   EV L+  +    DVWS+
Sbjct: 201 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 234

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSV 214

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           +   ++  H++ + H DL P+ ILFVN +                K+ S++  DFG + F
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191
Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E    +V + +Y   EV L+  +    DVWS+
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 225

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSV 218

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ----FNELVG 86
           I+  ++  H   V+H DL P  +L      +  LK  DFGL+    P         E V 
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E++   + Y   +D+WS+
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSV 219

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 35  VQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF------NELVGSL 88
           +   H++  +H D+    IL     ++F+ K  DFGL+   R  E+F      + +VG+ 
Sbjct: 146 INFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVMXSRIVGTT 199
Query: 89  YYMALEVLKRNYGPEVDVWS 108
            YMA E L+    P+ D++S
Sbjct: 200 AYMAPEALRGEITPKSDIYS 219

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	110
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	9e-55
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-55
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-53
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-53
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-52
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-52
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-52
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-51
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-51
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-51
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-50
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-49
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-49
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-49
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-49
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-48
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-48
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-48
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-48
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-48
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-47
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-47
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-47
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-47
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-47
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-47
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-46
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-46
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-45
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-44
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-44
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-38
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-36
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-31
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-30
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-30
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-29
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-26
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-26
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-25
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-23
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-23
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-23
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-23
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-23
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-22
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-21
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	9e-20
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-19
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-19
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-19
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-19
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-19
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-18
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-17
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	8e-16
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-15
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-15
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-13
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-13
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-13
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-13
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-12
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-12
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-12
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-12
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-11
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-11
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-10
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-09
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	9e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-08
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-08
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-08
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	9e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	9e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-04

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  170 bits (434), Expect = 9e-55
 Identities = 47/109 (43%), Positives = 64/109 (58%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+LC  GEL +R+V K  + E  AA +MK ++  V  CHK  V H DL P+  LF+    
Sbjct: 85  MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
              LK IDFGL+  F+P +     VG+ YY++ +VL+  YGPE D WS 
Sbjct: 145 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSA 193

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  170 bits (434), Expect = 9e-55
 Identities = 41/109 (37%), Positives = 64/109 (58%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +L   GEL D I+ +  ++E  AA ++K +   +   HKH ++H DL P+ IL  +K+K
Sbjct: 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
              +K IDFGLS  F+   +  + +G+ YY+A EVL+  Y  + DVWS 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSA 208

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  166 bits (423), Expect = 4e-53
 Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 1/110 (0%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L   GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K
Sbjct: 84  FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             ++K  DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+ 
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  167 bits (426), Expect = 9e-53
 Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L   GEL + IVA+  Y+E  A+  ++ I+E +  CH +G++H +L P+ +L  +K K
Sbjct: 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
             ++K  DFGL++     E ++   G+  Y++ EVLK++ Y   VD+W+
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  170 bits (433), Expect = 1e-52
 Identities = 41/108 (37%), Positives = 64/108 (59%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +L   GEL D I+ +  ++E  AA ++K +   +   HKH ++H DL P+ IL  +K+K
Sbjct: 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              +K IDFGLS  F+   +  + +G+ YY+A EVL+  Y  + DVWS
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  164 bits (417), Expect = 4e-52
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 1   MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           M+ CE GEL++RIV+        +E   A +MK ++  +   H   V+H DL P+ ILF 
Sbjct: 99  METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158

Query: 57  NKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           +      +K IDFGL+  F+  E      G+  YMA EV KR+   + D+WS 
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSA 211

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  169 bits (431), Expect = 4e-52
 Identities = 42/108 (38%), Positives = 65/108 (60%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +  E GEL ++I+ +  + E  AA +MK I+  +   HKH ++H D+ P+ IL  NK  
Sbjct: 125 TEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             ++K +DFGLS FF    +  + +G+ YY+A EVLK+ Y  + DVWS
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWS 232

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  167 bits (426), Expect = 1e-51
 Identities = 36/108 (33%), Positives = 65/108 (60%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            ++   GEL D I+++  ++E  AA +++ ++  +   HK+ ++H DL P+ +L  +K K
Sbjct: 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSK 164

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
             +++ IDFGLS  F   ++  + +G+ YY+A EVL   Y  + DVWS
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  163 bits (414), Expect = 5e-51
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL DRIV KG+Y+ER AA  +K I+E V   H++G++H DL P+ +L+     
Sbjct: 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAP 186

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSM 109
              LK  DFGLS     +     + G+  Y A E+L+   YGPEVD+WS+
Sbjct: 187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  166 bits (423), Expect = 5e-51
 Identities = 41/108 (37%), Positives = 67/108 (62%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  + GEL D I+ +  + E  AA ++K ++  V   HKH ++H DL P+ +L  +K+K
Sbjct: 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEK 174

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
              +K +DFGLS  F  +++  E +G+ YY+A EVL++ Y  + DVWS
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWS 222

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  164 bits (417), Expect = 1e-50
 Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L   GEL + IVA+ +Y+E  A+  ++ I+E V  CH+ GV+H +L P+ +L  +K K
Sbjct: 89  FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLK 148

Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             ++K  DFGL++     ++ +    G+  Y++ EVL+++ YG  VD+W+ 
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  158 bits (401), Expect = 2e-49
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL +RI  K H++E  A+ +M+ +V  V   H  GV+H DL P+ +LF ++  
Sbjct: 85  MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144

Query: 61  SFSLKAIDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
           +  +K IDFG +    P  Q       +L+Y A E+L +N Y    D+WS
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWS 194

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  156 bits (397), Expect = 3e-49
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 87  LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            +  +K IDFG++       +F  + G+  ++A E++     G E D+WS
Sbjct: 147 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 196

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  159 bits (404), Expect = 4e-49
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 197

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWS 108
           + +  LK  DFG +              + YY+A EVL    Y    D+WS
Sbjct: 198 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  158 bits (402), Expect = 4e-49
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L  +GEL D +  K   +E+   ++M++++E V   H + ++H DL P+ IL  +   
Sbjct: 179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM- 237

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWSM 109
              ++  DFG S    P E+  EL G+  Y+A E+LK         YG EVD+W+ 
Sbjct: 238 --QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  155 bits (394), Expect = 2e-48
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L ++GEL D +  K   +E+    +M+ ++EV+   HK  ++H DL P+ IL  +   
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM- 161

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-------RNYGPEVDVWSM 109
             ++K  DFG S    P E+  E+ G+  Y+A E+++         YG EVD+WS 
Sbjct: 162 --NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  155 bits (395), Expect = 2e-48
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK- 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 93  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++     G E D+WS+
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  155 bits (393), Expect = 2e-48
 Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRI+ +G YTE+ A+ V++ ++  V+  H++G++H DL P+ +L++  ++
Sbjct: 85  MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEE 144

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           +  +   DFGLS   +     +   G+  Y+A EVL +  Y   VD WS+
Sbjct: 145 NSKIMITDFGLSKMEQN-GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  155 bits (394), Expect = 2e-48
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 93  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  155 bits (394), Expect = 5e-48
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)

Query: 1   MKLCEEGELVDRIVAKGH----YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
            +  +  +L   IV +      Y+E VA+  M+ I+E ++ CH + ++H D+ P  +L  
Sbjct: 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164

Query: 57  NKKKSFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
           +K+ S  +K   FG+++            VG+ ++MA EV+KR  YG  VDVW 
Sbjct: 165 SKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  153 bits (389), Expect = 1e-47
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153

Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               +K IDFGL+       +F  + G+  ++A E++     G E D+WS
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  153 bits (388), Expect = 2e-47
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 1   MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +     ++ +RI        ER   + +  + E +Q  H H + H D+ P+ I++  ++
Sbjct: 80  FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR 139

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            S ++K I+FG +   +P + F  L  +  Y A EV + +      D+WS
Sbjct: 140 SS-TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  153 bits (388), Expect = 3e-47
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +L + GEL+D+I+ +  ++ER A+AV+ TI + V+  H  GV+H DL P  IL+V++  
Sbjct: 95  TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154

Query: 61  -SFSLKAIDFGLSVFFRPREQ-FNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              S++  DFG +   R           +  ++A EVL+R  Y    D+WS+
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSL 206

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  153 bits (388), Expect = 4e-47
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L   GEL D +  K   +E  A + +K I++ V   H   + H DL P+ I+ ++K  
Sbjct: 94  LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153

Query: 61  SFS-LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               +K IDFGL+       +F  + G+  ++A E++     G E D+WS
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  152 bits (386), Expect = 4e-47
 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 1   MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           ++    GE+    + +     +E     ++K I+E V   H++ ++H DL P+ IL  + 
Sbjct: 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI 167

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
                +K +DFG+S       +  E++G+  Y+A E+L  +      D+W+
Sbjct: 168 YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWN 218

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  152 bits (385), Expect = 5e-47
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 14/123 (11%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +    G ++  I  + H+ E  A+ V++ +   +   H  G+ H DL P+ IL  +  +
Sbjct: 90  FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ 149

Query: 61  SFSLKAIDFGLSVFFRPREQFNEL--------VGSLYYMALEVLK------RNYGPEVDV 106
              +K  DF L    +     + +         GS  YMA EV++        Y    D+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209

Query: 107 WSM 109
           WS+
Sbjct: 210 WSL 212

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  151 bits (383), Expect = 1e-46
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  E GEL  RI  +G   +TER AA +M+ I   +Q  H H + H D+ P+ +L+ +K
Sbjct: 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK 164

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWS 108
           +K   LK  DFG +              + YY+A EVL    Y    D+WS
Sbjct: 165 EKDAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  152 bits (387), Expect = 2e-46
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++L E GEL D++V      E         ++  VQ  H++G++H DL P+ +L  ++++
Sbjct: 218 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG S           L G+  Y+A EVL       Y   VD WS+
Sbjct: 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  152 bits (386), Expect = 3e-45
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +    GEL +++  +    +E  A   M+ + + +   H++  +H DL P+ I+F  K+
Sbjct: 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR 292

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWS 108
            +  LK IDFGL+    P++      G+  + A EV + +  G   D+WS
Sbjct: 293 SN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  146 bits (371), Expect = 2e-44
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+  + GEL DRI+ + +  TE      MK I E ++  H+  ++H DL P+ IL VN+ 
Sbjct: 165 MEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD 224

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               +K IDFGL+  ++PRE+     G+  ++A EV+  +      D+WS
Sbjct: 225 AK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWS 273

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  146 bits (371), Expect = 3e-44
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++    GEL DRI A+ +  +E      M+   E ++  H+H ++H D+ P+ I+   KK
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK 186

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            S S+K IDFGL+    P E       +  + A E++ R   G   D+W+
Sbjct: 187 AS-SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  127 bits (322), Expect = 9e-38
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 22/110 (20%)

Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 94  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 153

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
           + +  LK  DFG                     A E     Y    D+WS
Sbjct: 154 RPNAILKLTDFGF--------------------AKETTGEKYDKSCDMWS 183

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  124 bits (312), Expect = 6e-36
 Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 49/156 (31%)

Query: 1   MKLCEEGELVDRIVAKGH----------------------------------------YT 20
           M+LC  G L+D++                                               
Sbjct: 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR 166

Query: 21  ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ 80
           E++ + +M+ I   +   H  G+ H D+ P+  LF   K    +K +DFGLS  F     
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF-EIKLVDFGLSKEFYKLNN 225

Query: 81  -----FNELVGSLYYMALEVLK---RNYGPEVDVWS 108
                     G+ Y++A EVL     +YGP+ D WS
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  115 bits (290), Expect = 1e-31
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 1   MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+ CE G+L   +    +     E     ++  I   ++  H++ ++H DL P+ I+   
Sbjct: 97  MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 156

Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
             +    K ID G +      E   E VG+L Y+A E+L+ + Y   VD WS 
Sbjct: 157 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  107 bits (270), Expect = 5e-30
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 1   MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKIL-FV 56
           M+ C  G L   +    +     E     V++ +V  +    ++G++H ++ P  I+  +
Sbjct: 88  MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147

Query: 57  NKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR---------NYGPEVDVW 107
            +      K  DFG +      EQF  L G+  Y+  ++ +R          YG  VD+W
Sbjct: 148 GEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207

Query: 108 SM 109
           S+
Sbjct: 208 SI 209

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  109 bits (273), Expect = 6e-30
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 1   MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKIL-FV 56
           M+ C  G L   +    +     E     V++ +V  +    ++G++H ++ P  I+  +
Sbjct: 88  MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147

Query: 57  NKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN---------YGPEVDVW 107
            +      K  DFG +      EQF  L G+  Y+  ++ +R          YG  VD+W
Sbjct: 148 GEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207

Query: 108 SM 109
           S+
Sbjct: 208 SI 209

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  107 bits (269), Expect = 3e-29
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++LC    L + +  K   +       +++     +   H   ++H DL P  IL     
Sbjct: 97  IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155

Query: 60  KSFSLKAI--DFGLSVFFRPREQ----FNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
               +KA+  DFGL              + + G+  ++A E+L    K N    VD++S 
Sbjct: 156 AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSA 215

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  104 bits (262), Expect = 4e-28
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 31/139 (22%)

Query: 1   MKLCEEGELVDRIVAKGHY-------TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKI 53
           ++LC    L D + +K           E    ++++ I   V   H   ++H DL P+ I
Sbjct: 88  LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNI 146

Query: 54  LFVNKKKSFS----------LKAIDFGLSVFFRPREQ-----FNELVGSLYYMALEVL-- 96
           L     +  +          +   DFGL       +       N   G+  + A E+L  
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206

Query: 97  ------KRNYGPEVDVWSM 109
                 KR     +D++SM
Sbjct: 207 SNNLQTKRRLTRSIDIFSM 225

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 98.9 bits (247), Expect = 1e-26
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 19/121 (15%)

Query: 4   CEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           C   +L   +  K         +  K ++E V   H+HG++H DL P   L V+      
Sbjct: 109 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---- 164

Query: 64  LKAIDFGLSVFFRPREQFNEL---VGSLYYMALEVLKRN------------YGPEVDVWS 108
           LK IDFG++   +P          VG++ YM  E +K                P+ DVWS
Sbjct: 165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224

Query: 109 M 109
           +
Sbjct: 225 L 225

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 98.2 bits (245), Expect = 3e-26
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 19/121 (15%)

Query: 4   CEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           C   +L   +  K         +  K ++E V   H+HG++H DL P   L V+      
Sbjct: 90  CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---- 145

Query: 64  LKAIDFGLSVFFRPREQFNEL---VGSLYYMALEVLKR------------NYGPEVDVWS 108
           LK IDFG++   +P          VG++ YM  E +K                P+ DVWS
Sbjct: 146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205

Query: 109 M 109
           +
Sbjct: 206 L 206

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 98.7 bits (246), Expect = 4e-26
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 19/121 (15%)

Query: 4   CEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           C   +L   +  K         +  K ++E V   H+HG++H DL P   L V+      
Sbjct: 137 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG----M 192

Query: 64  LKAIDFGLSVFFRPREQFNEL---VGSLYYMALEVLKR------------NYGPEVDVWS 108
           LK IDFG++   +P          VG++ YM  E +K                P+ DVWS
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252

Query: 109 M 109
           +
Sbjct: 253 L 253

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 96.6 bits (241), Expect = 1e-25
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+ D +VA G   E+ A +  + IV  VQ CH+  ++H DL  + +L      
Sbjct: 93  MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN 152

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWSM 109
              +K  DFG S  F    + +   G+  Y A E+ + + Y GPEVDVWS+
Sbjct: 153 ---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 90.9 bits (226), Expect = 1e-23
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 21/127 (16%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAA-VMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ CE G L D I ++    +R     + + I+E +   H  G++H DL P  I     +
Sbjct: 94  MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR 153

Query: 60  KSFSLKAIDFGLS---------------VFFRPREQFNELVGSLYYMALEVL--KRNYGP 102
               +K  DFGL+                     +     +G+  Y+A EVL    +Y  
Sbjct: 154 N---VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210

Query: 103 EVDVWSM 109
           ++D++S+
Sbjct: 211 KIDMYSL 217

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 91.2 bits (227), Expect = 2e-23
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N+  
Sbjct: 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLNEDL 178

Query: 61  SFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFGL+       +    L G+  Y+A EVL +  +  EVDVWS+
Sbjct: 179 --EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 90.4 bits (225), Expect = 2e-23
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
            +L D I  KG   E  +      +V  +Q CH  GV+H D+  + IL     +    K 
Sbjct: 124 QDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKL 181

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWSM 109
           IDFG        E + +  G+  Y   E +    Y      VWS+
Sbjct: 182 IDFGSGALL-HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSL 225

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 89.6 bits (223), Expect = 3e-23
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++LC    L++    +   TE  A   ++ IV   Q  H++ V+H DL     LF+N+  
Sbjct: 94  LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLNEDL 152

Query: 61  SFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFGL+       +    L G+  Y+A EVL +  +  EVDVWS+
Sbjct: 153 --EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 89.7 bits (223), Expect = 4e-23
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
            +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL         LK 
Sbjct: 134 QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKL 191

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWSM 109
           IDFG          + +  G+  Y   E ++   Y G    VWS+
Sbjct: 192 IDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 89.0 bits (221), Expect = 9e-23
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
            +L   I       E +A+ + + +V  V       ++H D+  + I+       F++K 
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED---FTIKL 171

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-Y-GPEVDVWSM 109
           IDFG + +    + F    G++ Y A EVL  N Y GPE+++WS+
Sbjct: 172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 88.6 bits (220), Expect = 2e-22
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL +RI   G ++E  A    + ++  V  CH   + H DL  +  L ++   
Sbjct: 95  MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL-LDGSP 153

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNY-GPEVDVWSM 109
           +  LK  DFG S       Q    VG+  Y+A EVL ++ Y G   DVWS 
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSC 204

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 86.9 bits (216), Expect = 2e-22
 Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL D I   G   E  A  + + I+  V  CH+H V+H DL P+ +L      
Sbjct: 90  MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM- 148

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNY-GPEVDVWSM 109
             + K  DFGLS      E      GS  Y A EV+  R Y GPEVD+WS 
Sbjct: 149 --NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 87.2 bits (216), Expect = 1e-21
 Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GEL D I   G   E+ +  + + I+  V  CH+H V+H DL P+ +L      
Sbjct: 95  MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM- 153

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNY-GPEVDVWSM 109
             + K  DFGLS      E      GS  Y A EV+  R Y GPEVD+WS 
Sbjct: 154 --NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSS 202

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143

Query: 61  SFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEVL-KRNY-GPEVDVWSM 109
              LK  DFGL+  FR   +   L    G+L Y+A E+L +R +    VDVWS 
Sbjct: 144 ---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 85.0 bits (211), Expect = 3e-21
 Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL D IV K   TE       + I+  ++ CH+H ++H DL P+ +L  +     ++K 
Sbjct: 93  GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL---NVKI 149

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNY-GPEVDVWSM 109
            DFGLS             GS  Y A EV+  + Y GPEVDVWS 
Sbjct: 150 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 84.7 bits (210), Expect = 3e-21
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 84  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143

Query: 61  SFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEVL-KRNY-GPEVDVWSM 109
              LK  DFGL+  FR   +   L    G+L Y+A E+L +R +    VDVWS 
Sbjct: 144 ---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 83.0 bits (206), Expect = 7e-21
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHY-TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           +++C  GE+   +  +    +E  A   M  I+  +   H HG++H DL    +L     
Sbjct: 90  LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM 149

Query: 60  KSFSLKAIDFGLSVFFRPREQFNE-LVGSLYYMALEVLKRN-YGPEVDVWS 108
               +K  DFGL+   +   + +  L G+  Y++ E+  R+ +G E DVWS
Sbjct: 150 N---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWS 197

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 80.4 bits (199), Expect = 9e-20
 Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 9/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +L  +G +++ +      +E  A    + +++ ++  H   ++H D+ P  +L      
Sbjct: 117 FELVNQGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH 175

Query: 61  SFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVL---KRNY-GPEVDVWSM 109
              +K  DFG+S  F+  +   +  VG+  +MA E L   ++ + G  +DVW+M
Sbjct: 176 ---IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 81.2 bits (200), Expect = 1e-19
 Identities = 12/111 (10%), Positives = 30/111 (27%), Gaps = 9/111 (8%)

Query: 3   LCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
           L      +D +   +G         +   ++ +       G++H    P  +        
Sbjct: 174 LELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI---MPD 230

Query: 62  FSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN---YGPEVDVWSM 109
             L   D       +   +       + Y   E L  +   +   ++ W +
Sbjct: 231 GRLMLGDVSALW--KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQL 279

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 81.2 bits (200), Expect = 1e-19
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 1   MKLCEEGELVDRIVAKGHYT-----ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILF 55
            +L   G L++ I    +       + +  +    ++ +++  H   ++H D+ P   + 
Sbjct: 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205

Query: 56  VNK--------KKSFSLKAIDFGLSV---FFRPREQFNELVGSLYYMALEVL-KRNYGPE 103
            N           S  L  ID G S+    F     F     +  +  +E+L  + +  +
Sbjct: 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ 265

Query: 104 VDVWSM 109
           +D + +
Sbjct: 266 IDYFGV 271

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 79.2 bits (196), Expect = 2e-19
 Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    G +   +     + E+  A  +  +   +  CH   V+H D+ P+ +L  +  +
Sbjct: 88  LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 147

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
              LK  DFG SV   P  +  +L G+L Y+  E+++   +  +VD+WS
Sbjct: 148 ---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 78.9 bits (195), Expect = 3e-19
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C++G L   I  +      + +A  + + I + V   H   +++ DL P  I  V+ 
Sbjct: 99  MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT 158

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           K+   +K  DFGL    +   +     G+L YM+ E +  ++YG EVD++++
Sbjct: 159 KQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 207

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 78.4 bits (194), Expect = 4e-19
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    GEL   +   G + E+ +A  M+ + + +  CH+  V+H D+ P+ +L   K  
Sbjct: 93  LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG- 151

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-KRNYGPEVDVWSM 109
              LK  DFG SV   P  +   + G+L Y+  E++  + +  +VD+W  
Sbjct: 152 --ELKIADFGWSV-HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCA 198

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 77.7 bits (191), Expect = 2e-18
 Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 18/115 (15%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
             L+                +   ++ ++   H +G++H  L P  I+     +   +  
Sbjct: 191 EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFL 247

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVLKRN------------YGPEVDVWSM 109
             F   V             S  +   E+  R                  D W++
Sbjct: 248 TGFEHLV---RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 73.5 bits (181), Expect = 4e-17
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 1   MKLCEEGELVDRIVAKGHY-TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +LC    L     A G    E      ++  +  +   H  G++H D+ P  I F+  +
Sbjct: 136 TELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANI-FLGPR 193

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
                K  DFGL V            G   YMA E+L+ +YG   DV+S
Sbjct: 194 GR--CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFS 240

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 70.5 bits (173), Expect = 7e-16
 Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 1   MKLCEEGELVDRIVAKGH--------YTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPK 51
            +  E   ++                   +V   ++K+++      H    + H D+ P 
Sbjct: 122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPS 181

Query: 52  KILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN---YGPEVDVWS 108
            IL     +   +K  DFG S +    ++     G+  +M  E         G +VD+WS
Sbjct: 182 NILMDKNGR---VKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237

Query: 109 M 109
           +
Sbjct: 238 L 238

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL- 96
           CH  G+MH D+ P  ++ ++ +    L+ ID+GL+ F+ P +++N  V S Y+   E+L 
Sbjct: 146 CHSMGIMHRDVKPHNVM-IDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 203

Query: 97  -KRNYGPEVDVWS 108
             + Y   +D+WS
Sbjct: 204 DYQMYDYSLDMWS 216

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 14/120 (11%)

Query: 1   MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHK-----HGVMHHDLNPK 51
           M+ CE G+L   I      + +  E     VM  +   ++ CH+     H V+H DL P 
Sbjct: 86  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145

Query: 52  KILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            + F++ K++  +K  DFGL+        F    VG+ YYM+ E +   +Y  + D+WS+
Sbjct: 146 NV-FLDGKQN--VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 68.9 bits (169), Expect = 2e-15
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 1   MKLCEEGELVDRIVAKGHYT---ERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+LC +  L D +  +         V   +   I E V+  H  G+MH DL P  I F  
Sbjct: 94  MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153

Query: 58  KKKSFSLKAIDFGLS-------------VFFRPREQFNELVGSLYYMALEVLK-RNYGPE 103
                 +K  DFGL                     +    VG+  YM+ E +   +Y  +
Sbjct: 154 DDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210

Query: 104 VDVWSM 109
           VD++S+
Sbjct: 211 VDIFSL 216

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 69.0 bits (169), Expect = 3e-15
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 1   MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M  CE G+L  RI A     + E         I   ++  H   ++H D+  + I F+ K
Sbjct: 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI-FLTK 160

Query: 59  KKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWS 108
               +++  DFG++       +     +G+ YY++ E+ +   Y  + D+W+
Sbjct: 161 DG--TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 68.2 bits (167), Expect = 3e-15
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 21/127 (16%)

Query: 1   MKLCEEGELVDRI----VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           +   + G L + I          TE     ++  I   ++  H  G  H DL P   + +
Sbjct: 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKP-TNILL 167

Query: 57  NKKKSFSLKAIDFGLSVFFRPR----------EQFNELVGSLYYMALEVLK----RNYGP 102
             +    L  +D G                  + +     ++ Y A E+           
Sbjct: 168 GDEGQPVL--MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE 225

Query: 103 EVDVWSM 109
             DVWS+
Sbjct: 226 RTDVWSL 232

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 67.6 bits (165), Expect = 7e-15
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 20/126 (15%)

Query: 1   MKLCEEGELVDRIVAKGHYTER---VAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+LC +  L D +  +    +R   V   +   I E V+  H  G+MH DL P  I F  
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199

Query: 58  KKKSFSLKAIDFGLS-------------VFFRPREQFNELVGSLYYMALEVL-KRNYGPE 103
                 +K  DFGL                          VG+  YM+ E +   NY  +
Sbjct: 200 DDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK 256

Query: 104 VDVWSM 109
           VD++S+
Sbjct: 257 VDIFSL 262

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 67.3 bits (165), Expect = 7e-15
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 1   MKLCEEG--ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G  E++D +  +  +    A      +++ ++  H  G++H D+ P  +L    
Sbjct: 87  MEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELV---GSLYYMALEVL--KRNY-GPEVDVWSM 109
                LK    G++    P    +      GS  +   E+      + G +VD+WS 
Sbjct: 146 GT---LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSA 199

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 64.0 bits (156), Expect = 1e-13
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L E G L   I   G   E  A   +   +E ++  H   ++H D+    +L ++   
Sbjct: 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL-LSSD- 186

Query: 61  SFSLKAIDFGLS------VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
                  DFG +         +     + + G+  +MA EV+       +VD+WS
Sbjct: 187 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 241

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 63.1 bits (154), Expect = 3e-13
 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
           ++L + G+L   I      K    ER        +   ++  H   VMH D+ P  + F+
Sbjct: 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANV-FI 169

Query: 57  NKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                  +K  D GL   F       + LVG+ YYM+ E +  N Y  + D+WS+
Sbjct: 170 TATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 62.8 bits (152), Expect = 4e-13
 Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 11/111 (9%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
             L+                +   ++ ++   H +G++H  L P  I+     +   +  
Sbjct: 196 EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFL 252

Query: 67  IDFGLSVFF--RPREQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
             F   V                    A  +L              D W++
Sbjct: 253 TGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 62.4 bits (152), Expect = 5e-13
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  + G L D IV++    E   A V + +++ +   H  GV+H D+    IL      
Sbjct: 121 MEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG- 178

Query: 61  SFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG      +   +   LVG+ Y+MA EV+ R+ Y  EVD+WS+
Sbjct: 179 --RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSL 227

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 61.6 bits (150), Expect = 9e-13
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL      
Sbjct: 96  MEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG- 153

Query: 61  SFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG        + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 154 --SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 61.3 bits (149), Expect = 1e-12
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL- 96
            H  G+ H D+ P+ +L ++   +  LK  DFG +      E     + S YY A E++ 
Sbjct: 172 IHSFGICHRDIKPQNLL-LDPD-TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229

Query: 97  -KRNYGPEVDVWSM 109
              +Y   +DVWS 
Sbjct: 230 GATDYTSSIDVWSA 243

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL- 96
            H  G+ H D+ P+ +L ++      LK IDFG +      E     + S YY A E++ 
Sbjct: 157 IHSIGICHRDIKPQNLL-LDPPSG-VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIF 214

Query: 97  -KRNYGPEVDVWS 108
              NY   +D+WS
Sbjct: 215 GATNYTTNIDIWS 227

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVG 86
               ++ V  CHKH  +H D+ P+ IL + K     +K  DFG +     P + +++ V 
Sbjct: 108 TWQTLQAVNFCHKHNCIHRDVKPENIL-ITKHS--VIKLCDFGFARLLTGPSDYYDDEVA 164

Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y + E+L     YGP VDVW++
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAI 189

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PREQFNELVG 86
           +  I+  +  CH H ++H D+ P+ IL V++     +K  DFG +     P E +++ V 
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENIL-VSQSG--VVKLCDFGFARTLAAPGEVYDDEVA 186

Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E+L     YG  VDVW++
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAI 211

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 60.2 bits (146), Expect = 3e-12
 Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 26/131 (19%)

Query: 1   MKLCEEGELVDRIV---AKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILF 55
            +LC+ G+LV+ +    ++G  +      +       VQ  H+    ++H DL  + +L 
Sbjct: 113 TELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171

Query: 56  VNKKKSFSLKAIDFGLSVFFRPR-------------EQFNELVGSLYYMALEVL----KR 98
            N+    ++K  DFG +                   E+      +  Y   E++      
Sbjct: 172 SNQG---TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF 228

Query: 99  NYGPEVDVWSM 109
             G + D+W++
Sbjct: 229 PIGEKQDIWAL 239

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           +  ++  +  CH   V+H DL P+ +L +N++    LK  DFGL+  F  P  ++   + 
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLL-INREG--ELKIADFGLARAFGIPVRKYTHEIV 162

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y A +VL   + Y   +D+WS
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWS 186

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           +  ++  V  CH+H ++H DL P+ +L +N     +LK  DFGL+  F  P   +   V 
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLL-INSDG--ALKLADFGLARAFGIPVRSYTHEVV 181

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y A +VL   + Y   VD+WS
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWS 205

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           +  +++ +  CH   V+H DL P+ +L +N+     LK  +FGL+  F  P   ++  V 
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLL-INRNG--ELKLANFGLARAFGIPVRCYSAEVV 163

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y   +VL   + Y   +D+WS
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWS 187

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNK 58
            +L   G L   +        +V  +  + I++ +Q  H     ++H DL    I F+  
Sbjct: 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI-FITG 166

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWS 108
               S+K  D GL+   R       ++G+  +MA E+ +  Y   VDV++
Sbjct: 167 PTG-SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYA 214

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF-----RPREQFN 82
           M+ ++  +   H++ ++H D+    +L         LK  DFGL+  F         ++ 
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYT 186

Query: 83  ELVGSLYYMALEVL--KRNYGPEVDVWS 108
             V +L+Y   E+L  +R+YGP +D+W 
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWG 214

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           +  ++  +  CH+  V+H DL P+ +L +N++    LK  DFGL+     P + ++  V 
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLL-INERG--ELKLADFGLARAKSIPTKTYDNEVV 162

Query: 87  SLYYMALEVL--KRNYGPEVDVWS 108
           +L+Y   ++L    +Y  ++D+W 
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWG 186

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 16  KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VF 74
                  +       +++ +  CH++ ++H DL P+ +L +NK+    LK  DFGL+  F
Sbjct: 102 PRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL-INKRG--QLKLGDFGLARAF 158

Query: 75  FRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
             P   F+  V +L+Y A +VL   R Y   +D+WS
Sbjct: 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS---LKAIDFGLSVFF-RPREQFNE 83
           +  ++  V  CH    +H DL P+ +L ++   +     LK  DFGL+  F  P  QF  
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLL-LSVSDASETPVLKIGDFGLARAFGIPIRQFTH 196

Query: 84  LVGSLYYMALEVL--KRNYGPEVDVWS 108
            + +L+Y   E+L   R+Y   VD+WS
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWS 223

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 57.5 bits (139), Expect = 3e-11
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF-SLKAIDFGLSVFF----RPREQFN 82
           +  I++ +   H + V+H DL P  IL + +      +K  D G +  F    +P    +
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193

Query: 83  ELVGSLYYMALEVL--KRNYGPEVDVWS 108
            +V + +Y A E+L   R+Y   +D+W+
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWA 221

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVG 86
           M   ++ ++  H+H ++H DL P  +L +++     LK  DFGL+  F  P   +   V 
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNLL-LDENG--VLKLADFGLAKSFGSPNRAYTHQVV 174

Query: 87  SLYYMALEVL--KRNYGPEVDVWSM 109
           + +Y A E+L   R YG  VD+W++
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAV 199

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M+  +  +   H + ++H DL P+ IL V      ++K  DFGL+  +  +     +V +
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENIL-VTSGG--TVKLADFGLARIYSYQMALTPVVVT 182

Query: 88  LYYMALEVL-KRNYGPEVDVWS 108
           L+Y A EVL +  Y   VD+WS
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWS 204

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYY 90
           I++ +   HK+ ++H DL P+ IL   + +S  +K IDFG S +    ++    + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRS-GIKVIDFGSSCY--EHQRVYTYIQSRFY 265

Query: 91  MALEV-LKRNYGPEVDVWSM 109
            A EV L   YG  +D+WS+
Sbjct: 266 RAPEVILGARYGMPIDMWSL 285

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL- 96
            H  G+ H D+ P+ +L VN  K  +LK  DFG +    P E     + S +Y A E++ 
Sbjct: 157 IHSLGICHRDIKPQNLL-VN-SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELML 214

Query: 97  -KRNYGPEVDVWS 108
               Y P +D+WS
Sbjct: 215 GATEYTPSIDLWS 227

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 1   MKLCEEG---ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+    G    L+          E+      K I+E ++  H + ++H D+    +L   
Sbjct: 98  MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157

Query: 58  KKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN---YGPEVDVWS 108
              S  LK  DFG S              G+L YMA E++ +    YG   D+WS
Sbjct: 158 Y--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWS 210

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 28  MKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGS 87
           M  ++  +   H H V+H DL P+ IL V       +K  DFGL+  +  +     +V +
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNIL-VTSSG--QIKLADFGLARIYSFQMALTSVVVT 182

Query: 88  LYYMALEVL-KRNYGPEVDVWS 108
           L+Y A EVL + +Y   VD+WS
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWS 204

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G  +D ++  G   E   A +++ I++ +   H    +H D+    +L     +
Sbjct: 99  MEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE 157

Query: 61  SFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +K  DFG++      + + N  VG+ ++MA EV+K++ Y  + D+WS+
Sbjct: 158 ---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 205

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 54.3 bits (131), Expect = 4e-10
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRI-VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ C  G + D I +     TE   A ++++ ++ ++  H    +H D+    IL   + 
Sbjct: 103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG 162

Query: 60  KSFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                K  DFG++        + N ++G+ ++MA EV++   Y    D+WS+
Sbjct: 163 ---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 211

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 53.1 bits (128), Expect = 8e-10
 Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 25/130 (19%)

Query: 1   MKLCEEGELVDRI----VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV 56
            + C  G L D I        ++ E     ++  +   ++  H   ++H D+ P  I   
Sbjct: 90  NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149

Query: 57  NKKKSFSLKAI----------------DFGLSVFFRPREQFNELVGSLYYMALEVLKRN- 99
                 +                    D G               G   ++A EVL+ N 
Sbjct: 150 RTSIPNAASEEGDEDDWASNKVMFKIGDLGHV---TRISSPQVEEGDSRFLANEVLQENY 206

Query: 100 -YGPEVDVWS 108
            + P+ D+++
Sbjct: 207 THLPKADIFA 216

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 51.6 bits (124), Expect = 3e-09
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 1   MKLCEEGELVD--RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+ C  G + D  +        E   A + + I+  +   H+H V+H D+  + +L    
Sbjct: 106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL--- 162

Query: 59  KKSFSLKAIDFGLSV-FFRPREQFNELVGSLYYMALEVLKRN------YGPEVDVWSM 109
            ++  +K +DFG+S    R   + N  +G+ Y+MA EV+  +      Y  + D+WS+
Sbjct: 163 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 51.8 bits (124), Expect = 3e-09
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-L 96
            H  G++H DL P  I+ V      +LK +DFGL+            V + YY A EV L
Sbjct: 180 LHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236

Query: 97  KRNYGPEVDVWS 108
              Y   VD+WS
Sbjct: 237 GMGYKENVDIWS 248

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 51.6 bits (124), Expect = 3e-09
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
            +  ++H DL P+ IL  N K+S ++K +DFG S      ++  + + S +Y + EV L 
Sbjct: 176 PELSIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLG 232

Query: 98  RNYGPEVDVWSM 109
             Y   +D+WS+
Sbjct: 233 MPYDLAIDMWSL 244

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 51.5 bits (124), Expect = 4e-09
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 38  CHK--HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV 95
            H     V H D+ P  +L VN+    +LK  DFG +    P E     + S YY A E+
Sbjct: 145 LHLPSVNVCHRDIKPHNVL-VNEA-DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPEL 202

Query: 96  L--KRNYGPEVDVWS 108
           +   ++Y   VD+WS
Sbjct: 203 IFGNQHYTTAVDIWS 217

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 50.5 bits (121), Expect = 9e-09
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LK 97
           H  G++H DL P  I+ V      +LK +DFGL+            V + YY A EV L 
Sbjct: 144 HSAGIIHRDLKPSNIV-VKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

Query: 98  RNYGPEVDVWS 108
             Y   VD+WS
Sbjct: 201 MGYKENVDIWS 211

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 11/106 (10%)

Query: 8   ELVD----RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
           E V     +           A A +  I+  +   H  G++++DL P+ I+   ++    
Sbjct: 164 EYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---- 219

Query: 64  LKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
           LK ID G          F  L G+  + A E+++       D++++
Sbjct: 220 LKLIDLGAV---SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTV 262

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 50.3 bits (120), Expect = 1e-08
 Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 1   MKLCEEGELVD--RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
                 G   D           E   A +++ +++ +   H  G +H  +    IL    
Sbjct: 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 164

Query: 59  KKSFSLKAIDFGLSVFFRP--------REQFNELVGSLYYMALEVLKRN---YGPEVDVW 107
            K   +       ++             +     V  L +++ EVL++N   Y  + D++
Sbjct: 165 GK---VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221

Query: 108 S 108
           S
Sbjct: 222 S 222

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 15/89 (16%)

Query: 33  EVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL-----VGS 87
           E+     K  + H DL  K IL    KK+      D GL+V         ++     VG+
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180

Query: 88  LYYMALEVLK-------RNYGPEVDVWSM 109
             YMA EVL         +    VD+W+ 
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 11/75 (14%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALE 94
                ++H DL P  +L V       LK  DFG +      +    +    GS  +MA E
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTV--LKICDFGTA-----CDIQTHMTNNKGSAAWMAPE 173

Query: 95  VLKRN-YGPEVDVWS 108
           V + + Y  + DV+S
Sbjct: 174 VFEGSNYSEKCDVFS 188

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-- 96
           H+ GV+H DL+P  IL +    +  +   DF L+            V   +Y A E++  
Sbjct: 151 HEAGVVHRDLHPGNIL-LAD--NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207

Query: 97  KRNYGPEVDVWS 108
            + +   VD+WS
Sbjct: 208 FKGFTKLVDMWS 219

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 40  KHGVMHHDLNPKKILFVNKKKS---FSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV- 95
           + G++H D+ P+ +L            +K  D G + +    E +   + +  Y + EV 
Sbjct: 150 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHYTNSIQTREYRSPEVL 207

Query: 96  LKRNYGPEVDVWSM 109
           L   +G   D+WS 
Sbjct: 208 LGAPWGCGADIWST 221

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 20/86 (23%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS------VFFRPREQFNELVGSLYYMA 92
           H  G++H DL  K + + N K    +   DFGL          R  ++     G L ++A
Sbjct: 147 HAKGILHKDLKSKNVFYDNGK----VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202

Query: 93  LEVLKRN----------YGPEVDVWS 108
            E++++           +    DV++
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFA 228

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 1   MKLCEEGELVDRI-VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+ C  G   D + V K    E   AAV    ++ +   H H ++H D+    IL     
Sbjct: 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 191

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
               +K  DFG +    P    N  VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 192 L---VKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 239

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 15/89 (16%)

Query: 33  EVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL-----VGS 87
           E+V    K  + H DL  K IL    KK+ +    D GL+V         ++     VG+
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214

Query: 88  LYYMALEVLKRNYGPE-------VDVWSM 109
             YMA EVL  +   +        D+++M
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAM 243

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 49.0 bits (117), Expect = 3e-08
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 15/89 (16%)

Query: 33  EVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL-----VGS 87
           E+     K  + H DL  K IL    KK+ +    D GL+V F       ++     VG+
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209

Query: 88  LYYMALEVLKRNYGPE-------VDVWSM 109
             YM  EVL  +            D++S 
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSF 238

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 48.5 bits (116), Expect = 3e-08
 Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 11/117 (9%)

Query: 1   MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++ C  G +   ++      TE     V + ++E +   H   ++H DL    +L   + 
Sbjct: 95  IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG 154

Query: 60  KSFSLKAIDFGLSVFFRP-REQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
               ++  DFG+S       ++ +  +G+ Y+MA EV+         Y  + D+WS+
Sbjct: 155 D---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 19/124 (15%)

Query: 1   MKLCEEGELVD--------RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKK 52
           MKL   G ++D             G   E   A +++ ++E ++  HK+G +H D+    
Sbjct: 92  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151

Query: 53  ILFVNKKKSFSLKAIDFGLS------VFFRPREQFNELVGSLYYMALEVLKRN--YGPEV 104
           IL        S++  DFG+S            +     VG+  +MA EV+++   Y  + 
Sbjct: 152 ILLGEDG---SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 208

Query: 105 DVWS 108
           D+WS
Sbjct: 209 DIWS 212

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEV 95
           H  GV+H DL P  +  VN  +   LK +DFGL+     R    E+   V + +Y A EV
Sbjct: 143 HSAGVVHRDLKPGNLA-VN--EDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEV 194

Query: 96  L--KRNYGPEVDVWS 108
           +    +Y   VD+WS
Sbjct: 195 ILSWMHYNQTVDIWS 209

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKS--FSLKAIDFGLSVFFRPREQFNEL---VGSLYYMA 92
                ++H DL    I   +  ++     K  DFGLS     ++  + +   +G+  +MA
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLGNFQWMA 194

Query: 93  LEVL---KRNYGPEVDVWS 108
            E +   + +Y  + D +S
Sbjct: 195 PETIGAEEESYTEKADTYS 213

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEV 95
           H  G++H DL P  +  VN  +   LK +DFGL+     R+  +E+   V + +Y A EV
Sbjct: 145 HAAGIIHRDLKPGNLA-VN--EDCELKILDFGLA-----RQADSEMTGYVVTRWYRAPEV 196

Query: 96  L--KRNYGPEVDVWS 108
           +     Y   VD+WS
Sbjct: 197 ILNWMRYTQTVDIWS 211

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.3 bits (115), Expect = 6e-08
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           + L   G+L   +   G ++E         I+  ++  H   V++ DL P  IL     +
Sbjct: 271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DE 327

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
              ++  D GL+  F  +++ +  VG+  YMA EVL++   Y    D +S+
Sbjct: 328 HGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 47.7 bits (114), Expect = 9e-08
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEV 95
           H   ++H DL P  +  VN  +   LK +DFGL+     R   +E+   V + +Y A E+
Sbjct: 149 HSADIIHRDLKPSNLA-VN--EDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEI 200

Query: 96  L--KRNYGPEVDVWS 108
           +    +Y   VD+WS
Sbjct: 201 MLNWMHYNQTVDIWS 215

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.4 bits (113), Expect = 9e-08
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G+LV  +++     E+ A      +V  +   H  G +H D+ P  +L     K
Sbjct: 148 MEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DK 203

Query: 61  SFSLKAIDFGLSVFFRPREQF--NELVGSLYYMALEVLKR-----NYGPEVDVWSM 109
           S  LK  DFG  +          +  VG+  Y++ EVLK       YG E D WS+
Sbjct: 204 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKK 59
           M+  + G L   +   G   E++   V   +++ +     KH +MH D+ P  IL VN +
Sbjct: 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSR 168

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
                K  DFG+S         N  VG+  YM+ E L+   Y  + D+WSM
Sbjct: 169 GEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN----ELVGSLYYMALE 94
           H   V+H DL P  +  +N +    LK  DFGL+    P         E + + +Y +  
Sbjct: 137 HSANVLHRDLKPANLF-INTEDL-VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194

Query: 95  VL--KRNYGPEVDVWS 108
           +L    NY   +D+W+
Sbjct: 195 LLLSPNNYTKAIDMWA 210

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN----ELVGSLYYMALE 94
           H   V+H DL P  +L +N   +  LK  DFGL+    P         E V + +Y A E
Sbjct: 145 HSANVLHRDLKPSNLL-LN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201

Query: 95  VL--KRNYGPEVDVWS 108
           ++   + Y   +D+WS
Sbjct: 202 IMLNSKGYTKSIDIWS 217

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 19/86 (22%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS---------------VFFRPREQFNE 83
           H   ++H DLN    L V   ++ ++   DFGL+               +    R++   
Sbjct: 125 HSMNIIHRDLNSHNCL-VR--ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181

Query: 84  LVGSLYYMALEVLK-RNYGPEVDVWS 108
           +VG+ Y+MA E++  R+Y  +VDV+S
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFS 207

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKK 59
           M+L        +   +G   ER+   +   IV+ +     KHGV+H D+ P  IL ++++
Sbjct: 103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL-LDER 161

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN------YGPEVDVWSM 109
               +K  DFG+S      +  +   G   YMA E +         Y    DVWS+
Sbjct: 162 G--QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 45.1 bits (107), Expect = 6e-07
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 12/83 (14%)

Query: 36  QVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMA 92
           +  HK  + H D+  K +L    K + +    DFGL++ F   +     +  VG+  YMA
Sbjct: 145 KDGHKPAISHRDIKSKNVL---LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201

Query: 93  LEVL------KRNYGPEVDVWSM 109
            EVL      +R+    +D+++M
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAM 224

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 45.0 bits (107), Expect = 7e-07
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR 98
               ++H D+ P  IL     +   +   DF ++       Q   + G+  YMA E+   
Sbjct: 132 QNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188

Query: 99  N----YGPEVDVWS 108
                Y   VD WS
Sbjct: 189 RKGAGYSFAVDWWS 202

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 44.6 bits (106), Expect = 8e-07
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS-VFFRPREQFNELVGSLYYMALEVL 96
                ++H +L    +L V+KK  +++K  DFGLS +            G+  +MA EVL
Sbjct: 155 NRNPPIVHRNLKSPNLL-VDKK--YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211

Query: 97  KRN-YGPEVDVWS 108
           +      + DV+S
Sbjct: 212 RDEPSNEKSDVYS 224

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           +   ++  H++ + H DL P+ ILFVN +                K+ S++  DFG + F
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191

Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E    +V + +Y   EV L+  +    DVWS+
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 225

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNEL---VGSLYYMALEV 95
           H   ++H DL    I      +  ++K  DFGL+         ++     GS+ +MA EV
Sbjct: 137 HAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193

Query: 96  LKRN----YGPEVDVWS 108
           ++      Y  + DV++
Sbjct: 194 IRMQDSNPYSFQSDVYA 210

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 25/102 (24%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVN----------------------KKKSFSLKAID 68
           I++ +    K  + H DL P+ IL  +                      + KS  +K ID
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205

Query: 69  FGLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
           FG + F    +    ++ +  Y A EV L   +    D+WS 
Sbjct: 206 FGCATF--KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSF 245

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK 97
             +  +  H LN + ++ +++    + +     +   F    Q    + +  ++A E L+
Sbjct: 129 TLEPLIPRHALNSRSVM-IDED--MTARISMADVKFSF----QSPGRMYAPAWVAPEALQ 181

Query: 98  R----NYGPEVDVWS 108
           +          D+WS
Sbjct: 182 KKPEDTNRRSADMWS 196

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165

Query: 61  SFSLKAIDFGLS---VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              ++  DFG +        + + N  VG+  Y++ E+L         D+W++
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 218

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF--NELVGSL 88
           IV  +   H+ G +H D+ P  IL     +   ++  DFG  +  R          VG+ 
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227

Query: 89  YYMALEVLKR--------NYGPEVDVWSM 109
            Y++ E+L+         +YGPE D W++
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWAL 256

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 16/78 (20%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSL------KAIDFGLSVFFRPREQFNELVGSLYYMA 92
           H+  +++ DL P+ IL         L      +  D GL+V     +     VG++ YMA
Sbjct: 303 HRERIVYRDLKPENIL---------LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353

Query: 93  LEVLKRN-YGPEVDVWSM 109
            EV+K   Y    D W++
Sbjct: 354 PEVVKNERYTFSPDWWAL 371

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 12/112 (10%)

Query: 7   GELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK 65
           G+L+  +   +    E +A   +  +V  +   H+   +H D+ P  IL      +  ++
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIR 215

Query: 66  AIDFGLSVFFRPREQF--NELVGSLYYMALEVL------KRNYGPEVDVWSM 109
             DFG  +          +  VG+  Y++ E+L      K  YGPE D WS+
Sbjct: 216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------KSFSLKAIDFGLSVF 74
           I + V   H + + H DL P+ ILFV                    +  +K +DFG + +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186

Query: 75  FRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
               E  + LV + +Y A EV L   +    DVWS+
Sbjct: 187 --DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSI 220

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  E   L + I + G  +   A      I++ ++  H   ++H D+ P+ IL  + K 
Sbjct: 90  MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT 149

Query: 61  SFSLKAIDFGLSVFFR--PREQFNELVGSLYYMALEVLKRNY-GPEVDVWSM 109
              LK  DFG++         Q N ++G++ Y + E  K        D++S+
Sbjct: 150 ---LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 39  HKHG---VMHHDLNPKKILFVNKKKSFS-----LKAIDFGLSVFFRPREQFNELVGSLYY 90
           H      ++H DL    IL + K ++       LK  DFGL+  +    + +   G+  +
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAW 180

Query: 91  MALEVLKRN-YGPEVDVWS 108
           MA EV++ + +    DVWS
Sbjct: 181 MAPEVIRASMFSKGSDVWS 199

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 33/101 (32%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS------------------------- 72
            H  G++H DL P   L VN+    S+K  DFGL+                         
Sbjct: 172 VHSAGILHRDLKPANCL-VNQD--CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228

Query: 73  VFFRPREQFNEL---VGSLYYMALEVL--KRNYGPEVDVWS 108
            F   +    +L   V + +Y A E++  + NY   +DVWS
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS 269

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 41.0 bits (96), Expect = 2e-05
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 20/89 (22%)

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---------NELVGSL 88
            +K  + H DLN + +L    K   +    DFGLS+                    VG++
Sbjct: 136 HYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192

Query: 89  YYMALEVLK--------RNYGPEVDVWSM 109
            YMA EVL+         +   +VD++++
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYAL 221

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 22/120 (18%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKIL-----F 55
           M+L    +L   +  +G      A A+++ I   +   H  G  H D+ P+ IL     F
Sbjct: 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF 172

Query: 56  VNKKKSFSLKAIDFGLSVFFRPRE-----QFNELVGSLYYMALEVLKRNY-GPEVDVWSM 109
                      +DFG++            Q    VG+LYYMA E    ++     D++++
Sbjct: 173 A--------YLVDFGIA---SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYAL 221

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 16/83 (19%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFN-----------ELVGS 87
           H   V+H DL P  +L +N   +  LK  DFGL+         N           E V +
Sbjct: 129 HGSNVIHRDLKPSNLL-INS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185

Query: 88  LYYMALEVL--KRNYGPEVDVWS 108
            +Y A EV+     Y   +DVWS
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWS 208

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  +   L D +  +G  T + A  V+    + +   H++G++H D+ P  I+      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154

Query: 61  SFSLKAIDFGLSVFFRPRE----QFNELVGSLYYMALEVLKRNY-GPEVDVWSM 109
              +K +DFG++           Q   ++G+  Y++ E  + +      DV+S+
Sbjct: 155 ---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 6/105 (5%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLK 65
           GEL   +  +  ++E  A      IV  +   H +  V++ DL  + ++     K   +K
Sbjct: 233 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIK 289

Query: 66  AIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
             DFGL     +         G+  Y+A EVL+ N YG  VD W 
Sbjct: 290 ITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 39.2 bits (91), Expect = 8e-05
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L+  I   G + E  A      I   +      G+++ DL    ++         +K 
Sbjct: 427 GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKI 483

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG+               G+  Y+A E++    YG  VD W+ 
Sbjct: 484 ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 528

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           GEL   +  +  +TE  A      IV  ++  H   V++ D+  + ++     K   +K 
Sbjct: 90  GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKI 146

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            DFGL               G+  Y+A EVL+ N YG  VD W 
Sbjct: 147 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVA---AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           M+    GE+   +   G ++E  A   AA    IV   +  H   +++ DL P+ +L   
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLHSLDLIYRDLKPENLLI-- 174

Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             +   ++  DFG +   R + +   L G+   +A E++    Y   VD W++
Sbjct: 175 -DQQGYIQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL 224

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL-- 64
           GEL  ++  +G + E  A   +  I   +   H+ G+++ DL P+ I+         L  
Sbjct: 106 GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM---------LNH 156

Query: 65  ----KAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
               K  DFGL           +   G++ YMA E+L R+ +   VD WS+
Sbjct: 157 QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 8/71 (11%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR--------PREQFN 82
           ++  V+  H    +H D+ P   L    +++  +  IDFGL+  +R        P  +  
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENK 171

Query: 83  ELVGSLYYMAL 93
            L G+  Y ++
Sbjct: 172 NLTGTARYASV 182

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 31  IVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR--------PREQFN 82
           ++  ++  H    +H D+ P   L    KK   +  IDFGL+  +R        P  +  
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK 173

Query: 83  ELVGSLYYMAL 93
            L G+  Y ++
Sbjct: 174 NLTGTARYASI 184

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L+  I     + E  A      I+  +   H  G+++ DL    +L          K 
Sbjct: 109 GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKL 165

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG+               G+  Y+A E+L+   YGP VD W+M
Sbjct: 166 ADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 28/95 (29%)

Query: 39  HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSL---------- 88
           H+ G++H DL P   L +N+    S+K  DFGL+      +  N +              
Sbjct: 146 HESGIIHRDLKPANCL-LNQD--CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202

Query: 89  -------------YYMALEVL--KRNYGPEVDVWS 108
                        +Y A E++  + NY   +D+WS
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWS 237

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 16  KGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF 74
                E +   +  +IV+ ++  H K  V+H D+ P  +L +N       K  DFG+S +
Sbjct: 103 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL-INALGQV--KMCDFGISGY 159

Query: 75  FRPREQFNELVGSLYYMALEVLK-----RNYGPEVDVWSM 109
                  +   G   YMA E +      + Y  + D+WS+
Sbjct: 160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 17/110 (15%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL-- 64
           G+L  R+  +  +TE      +  +   +   H  G+++ DL P+ IL         L  
Sbjct: 111 GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL---------LDE 161

Query: 65  ----KAIDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               K  DFGLS       ++     G++ YMA EV+ R  +    D WS
Sbjct: 162 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWS 211

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L+  +  +    E  A      I   +   H+ G+++ DL    +L         +K 
Sbjct: 138 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKL 194

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            D+G+     RP +  +   G+  Y+A E+L+   YG  VD W++
Sbjct: 195 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L+  +  +    E  A      I   +   H+ G+++ DL    +L         +K 
Sbjct: 95  GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKL 151

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            D+G+     RP +  +   G+  Y+A E+L+   YG  VD W++
Sbjct: 152 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 196

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 5/105 (4%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G+L+  I   G + E  A      I   +      G+++ DL    ++         +K 
Sbjct: 106 GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKI 162

Query: 67  IDFGLS-VFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            DFG+               G+  Y+A E++    YG  VD W+ 
Sbjct: 163 ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 207

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 36.0 bits (83), Expect = 9e-04
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEV-LKRNYGPEVDVWSM 109
             +   +K  D G +      + F E + +  Y +LEV +   Y    D+WS 
Sbjct: 229 NAEKLKVKIADLGNA--CWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWST 279

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.98
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.95
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.94
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.94
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.94
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.94
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.94
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.94
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.93
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.93
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.93
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.93
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.93
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.93
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.93
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.92
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.92
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.92
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.92
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.92
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
3niz_A	311	Rhodanese family protein; structural genomics, str	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.92
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.92
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.92
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.92
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.92
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.92
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.92
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.92
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.92
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.91
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.91
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.91
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.91
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.91
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.91
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.91
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.91
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.91
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.91
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.91
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.91
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.91
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.91
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.91
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.91
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.91
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.91
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.91
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.91
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.9
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.9
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.9
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.9
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.9
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.9
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.9
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.9
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.9
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.89
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.89
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.89
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.89
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.89
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.89
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.89
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.88
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.88
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.88
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.86
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.84
3uqc_A	286	Probable conserved transmembrane protein; structur	99.75
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.69
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.46
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.22
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.34
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.3
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.09
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.67
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.65
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.04
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.69
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.62
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.18
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	93.98
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.87
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.67
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.1
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	92.95
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.72
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.19
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.99
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.75
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.63
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	90.25
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	89.8
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.68
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.22
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	82.75
3mes_A	424	Choline kinase; malaria, structural genomics, stru	82.55

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.4e-38  Score=194.08  Aligned_cols=107  Identities=26%  Similarity=0.529  Sum_probs=95.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||+||+|.+++.+.+.+++.+++.++.|++.|+.|||+++|+||||||+||+++.   ...+||+|||+++.+.... 
T Consensus       111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~---~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE---DMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TSCEEECCCTTCEECCTTTT
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcC---CCCEEEEEcCCceecCCCCC
Confidence            799999999999998899999999999999999999999999999999999999954   4459999999998774322 


Q ss_pred             --ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        ...+.+||+.|+|||++.+ .|+.++|+||+|
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlG  221 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALG  221 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHH
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHH
Confidence              2345789999999999985 589999999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.1e-37  Score=190.03  Aligned_cols=107  Identities=26%  Similarity=0.401  Sum_probs=93.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||+||+|.+++.+.+.+++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||+++..... .
T Consensus       105 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE---EGHIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             ECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT---TSCEEEESSEEEEC-----C
T ss_pred             EEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcC---CCCEEecccccceeccCCCc
Confidence            799999999999998899999999999999999999999999999999999999954   345999999999865433 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...+.+||+.|+|||++.+ .|+.++|+||+|
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG  213 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG  213 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHH
T ss_pred             cccccccCcccCCHHHhccCCCCCCCcccchH
Confidence            3345789999999999984 599999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1e-36  Score=187.73  Aligned_cols=107  Identities=23%  Similarity=0.340  Sum_probs=94.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.||.|||+++  |+||||||+||+++.  ....+||+|||+++.... 
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~~~~-  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGGCCT-
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC--CCCCEEEEeCcCCEeCCC-
Confidence            799999999999998899999999999999999999999998  999999999999952  234599999999975433 


Q ss_pred             cccccccccccccccccccccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      ....+.+||+.|+|||++.+.|+.++|+||||
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlG  216 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFG  216 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHH
T ss_pred             CccCCcccCccccCHHHcCCCCCcHHHHHHHH
Confidence            23345689999999999988899999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.6e-36  Score=189.90  Aligned_cols=108  Identities=25%  Similarity=0.347  Sum_probs=92.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||+||+|.+++.+.+++++.++..++.|++.||.|||+++|+||||||+|||++.++  ..+||+|||+++.+.....
T Consensus       129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC-----
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCc
Confidence            79999999999999889999999999999999999999999999999999999995432  2499999999987643221


Q ss_pred             ------cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                            ....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG  243 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC  243 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHH
Confidence                  123579999999999985 499999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.5e-36  Score=189.51  Aligned_cols=106  Identities=35%  Similarity=0.614  Sum_probs=93.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||++|+|.+++.+ +++++.++..++.|++.||.|||+++|+||||||+|||++.   ...+||+|||+++.+... .
T Consensus       150 mEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          150 MEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             ECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECCSSSC
T ss_pred             EeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC---CCCEEEecCcCceecCCCCC
Confidence            799999999998865 57999999999999999999999999999999999999954   345999999999877543 3


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlG  257 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLG  257 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHH
Confidence            3456789999999999984 599999999997

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.8e-36  Score=184.03  Aligned_cols=106  Identities=36%  Similarity=0.647  Sum_probs=83.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||| +|+|.+++.+.+++++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||+++.......
T Consensus        92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~---~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE---HLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT---TCCEEECCSSCC--------
T ss_pred             EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECC---CCCEEEeecCCCeecCCCCc
Confidence            7999 6799999999999999999999999999999999999999999999999954   44599999999987665554


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ..+.+||+.|+|||++.+. | +.++|+||+|
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlG  199 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG  199 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHH
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHH
Confidence            5567899999999999854 4 6799999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=190.59  Aligned_cols=106  Identities=35%  Similarity=0.614  Sum_probs=93.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||+||+|.+++.. +.+++.++..++.||+.||.|||+++|+||||||+|||++.   ...+||+|||+++.+... .
T Consensus       227 mEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~---~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          227 MEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             EECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT---TCCEEECCCTTCEECCSSCC
T ss_pred             EeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC---CCCEEEecCccceECCCCCc
Confidence            799999999998864 56999999999999999999999999999999999999954   345999999999877543 3


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||||
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlG  334 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLG  334 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHH
Confidence            3456789999999999985 599999999997

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.1e-36  Score=188.77  Aligned_cols=107  Identities=22%  Similarity=0.485  Sum_probs=92.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||+||+|.+++...  ..+++.++..++.||+.||.|||+++|+||||||+||+++.   ...+||+|||+++.+...
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT---TCCEEECSTTEESCCCHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC---CCCEEEcccccceeecCC
Confidence            7999999999999754  45899999999999999999999999999999999999954   345999999999876543


Q ss_pred             cc-cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .. ....+||+.|+|||++.+ .|+.++|+||||
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlG  212 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYNNKSDIWALG  212 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cccccccCCCccccCHHHHCCCCCCcHHHHHHHH
Confidence            22 344689999999999985 499999999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=181.70  Aligned_cols=107  Identities=21%  Similarity=0.381  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... +++++.++..++.|++.|+.|||+++|+||||||+||+++   ....+||+|||+++......
T Consensus       110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC-----
T ss_pred             EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCceecccCC
Confidence            7999999999999764 6799999999999999999999999999999999999995   34569999999997654321


Q ss_pred             ---ccccccccccccccccccc----cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                         .....+||+.|+|||++.+    .|+.++|+||||
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~G  224 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG  224 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHH
Confidence               2334689999999999852    388899999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1e-34  Score=179.70  Aligned_cols=107  Identities=31%  Similarity=0.520  Sum_probs=84.3

Q ss_pred             CCCcCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||++|+|.+++.....   ..+..+..++.|++.|+.|||+++|+||||||+||+++.   ...+||+|||+++.+..
T Consensus        94 mE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~---~~~vKl~DFGla~~~~~  170 (299)
T 4g31_A           94 MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQ  170 (299)
T ss_dssp             EECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECCCCCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC---CCcEEEccCccceecCC
Confidence            799999999999987654   455678899999999999999999999999999999954   34599999999877643


Q ss_pred             ccc-------------cccccccccccccccccc-cCCCccceeecC
Q 033837           78 REQ-------------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~-------------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...             ....+||+.|+|||++.+ .|+.++|+||||
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG  217 (299)
T 4g31_A          171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG  217 (299)
T ss_dssp             ---------------------CCCTTSCHHHHTTCCCCTHHHHHHHH
T ss_pred             CccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHH
Confidence            211             123579999999999985 599999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.8e-34  Score=192.66  Aligned_cols=106  Identities=26%  Similarity=0.364  Sum_probs=94.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||+||+|.+++.+.+.+++..++.+++||+.||.|||+++|+||||||+|||++.   .+.+||+|||++..+.... 
T Consensus       271 mEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~---~G~vKL~DFGlA~~~~~~~-  346 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLACDFSKKK-  346 (689)
T ss_dssp             ECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT---TSCEEECCCTTCEECSSCC-
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeC---CCCEEecccceeeecCCCC-
Confidence            799999999999998899999999999999999999999999999999999999954   4459999999998765432 


Q ss_pred             ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      ..+.+||+.|+|||++. + .|+.++|+||+|
T Consensus       347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLG  378 (689)
T 3v5w_A          347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLG  378 (689)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHH
T ss_pred             CCCccCCcCccCHHHHhCCCCCCcHHHHHHHH
Confidence            34578999999999996 4 489999999997

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.8e-34  Score=178.56  Aligned_cols=107  Identities=21%  Similarity=0.322  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEe
Q 033837            1 MKLCEEGELVDRIVAK-------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI   67 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~   67 (110)
                      ||||++|+|.+++.+.             ..+++.++..++.|++.|+.|||+++|+||||||+||+++   ....+|++
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~---~~~~~Ki~  170 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIG  170 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC---CCCcEEEC
Confidence            7999999999999753             3699999999999999999999999999999999999994   44569999


Q ss_pred             ecccceecCCcccc---cccccccccccccccc-ccCCCccceeecC
Q 033837           68 DFGLSVFFRPREQF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        68 d~g~~~~~~~~~~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      |||+++........   ....||+.|+|||++. +.|+.++|+||||
T Consensus       171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~G  217 (299)
T 4asz_A          171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  217 (299)
T ss_dssp             CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHH
Confidence            99999766443221   2346889999999998 5699999999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=9.4e-34  Score=175.94  Aligned_cols=107  Identities=20%  Similarity=0.359  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      ||||++|+|.+++...                ..+++.++..++.|++.|+.|||+++++||||||+||+++   ....+
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~---~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC---CCCCE
Confidence            7999999999999642                3589999999999999999999999999999999999994   44569


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ||+|||+++.......   .....||+.|+|||++. +.|+.++|+||||
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG  234 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG  234 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence            9999999987643321   23357899999999997 5699999999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=7.4e-34  Score=179.08  Aligned_cols=107  Identities=23%  Similarity=0.317  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      ||||++|+|.+++.+.                ..+++.++..++.|++.|+.|||+++|+||||||+||+++   ....+
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~---~~~~v  224 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV  224 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCE
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC---CCCCE
Confidence            7999999999999752                3488999999999999999999999999999999999995   44569


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ||+|||+++.+.....   .....||+.|+|||++. +.|+.++|+||||
T Consensus       225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~G  274 (353)
T 4ase_A          225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  274 (353)
T ss_dssp             EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehH
Confidence            9999999987643322   23357889999999998 4599999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.98  E-value=1.9e-33  Score=175.92  Aligned_cols=107  Identities=20%  Similarity=0.238  Sum_probs=84.9

Q ss_pred             CCCcCCCCHHHHHHhC---------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEE
Q 033837            1 MKLCEEGELVDRIVAK---------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLK   65 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~   65 (110)
                      ||||++|+|.+++.+.               +++++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~---~~~~K  198 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ---GLVVK  198 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET---TTEEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC---CCcEE
Confidence            7999999999998653               35899999999999999999999999999999999999953   45699


Q ss_pred             EeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           66 AIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        66 l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |+|||+++.......   .....||+.|+|||++.+ .|+.++|+||||
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~G  247 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG  247 (329)
T ss_dssp             ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred             EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchH
Confidence            999999986643321   233578999999999984 599999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=1e-32  Score=174.43  Aligned_cols=105  Identities=23%  Similarity=0.380  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.   .+++.+++.++.|++.|+.|||+++|+||||||+||+++.+  ...+|++|||+++...... 
T Consensus        99 mE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~--~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A           99 MPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             EECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCC--CCeEEECcCCCCcccCCccc
Confidence            79999999999883   59999999999999999999999999999999999999643  2469999999987543211 


Q ss_pred             ----------------------------ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 ----------------------------QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ----------------------------~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                                                  .....+||+.|+|||++.+  .|+.++|+||+|
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG  234 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG  234 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence                                        1123579999999999874  389999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=9.6e-33  Score=176.34  Aligned_cols=106  Identities=25%  Similarity=0.390  Sum_probs=90.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||+ |+|.+++.+.+++++.+++.++.|++.||.|||+++|+||||||+||+++.   ...+|++|||+++.+.... 
T Consensus       138 mE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~---~~~~Ki~DFGla~~~~~~~~  213 (398)
T 4b99_A          138 LDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE---NCELKIGDFGMARGLCTSPA  213 (398)
T ss_dssp             EECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TCCEEECCCTTCBCC-----
T ss_pred             EeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC---CCCEEEeecceeeecccCcc
Confidence            79996 689999988899999999999999999999999999999999999999954   4459999999998764321 


Q ss_pred             ----ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 ----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                          .....+||+.|+|||++.+  .|+.++|+||+|
T Consensus       214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG  250 (398)
T 4b99_A          214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG  250 (398)
T ss_dssp             --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             ccccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence                2235689999999999874  378999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.97  E-value=7.6e-33  Score=183.36  Aligned_cols=109  Identities=28%  Similarity=0.506  Sum_probs=96.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||+||+|.+++.. .+.+++.+++.++.||+.||.|||+++|+||||||+||+++.+. ...+||+|||+++.+....
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~-~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCSSCEECCTTS
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCC-CCCEEEeeccceeEccCCC
Confidence            799999999999964 46899999999999999999999999999999999999996432 2469999999998886665


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlG  343 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG  343 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHH
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHH
Confidence            5566789999999999985 489999999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.3e-32  Score=170.57  Aligned_cols=106  Identities=26%  Similarity=0.269  Sum_probs=86.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH--------GVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      ||||++|+|.+++.. .++++..+..++.|++.|+.|+|++        +|+||||||+|||++   ....+||+|||++
T Consensus        80 ~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla  155 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             ecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC---CCCCEEEEeCCCC
Confidence            799999999999965 4688999999999999999999987        899999999999994   4456999999998


Q ss_pred             eecCCccc-----cccccccccccccccccc-------cCCCccceeecC
Q 033837           73 VFFRPREQ-----FNELVGSLYYMALEVLKR-------NYGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~-----~~~~~~~~~~~~pe~~~~-------~~~~~~d~wslg  110 (110)
                      +.......     ....+||+.|+|||++.+       .|+.++|+||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~G  205 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHH
Confidence            87643321     123579999999999863       256689999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=3.6e-30  Score=164.49  Aligned_cols=107  Identities=22%  Similarity=0.387  Sum_probs=93.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC-Ccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR-PRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~-~~~   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++|+||||+|+||+++.   ...+||+|||++.... ...
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~---~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCCCCTTC
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECC---CCCEEEeecceeeecccCCC
Confidence            699999999999988889999999999999999999999999999999999999954   4459999999987632 333


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||||
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslG  240 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALG  240 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             ccccccCCcccCCchhhcCCCCChHHHHHHHH
Confidence            3455789999999999985 589999999987

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=3.3e-30  Score=162.60  Aligned_cols=107  Identities=26%  Similarity=0.397  Sum_probs=89.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++...... .
T Consensus       103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~---~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCSCC---
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECC---CCCEEEccccceeecccCCc
Confidence            799999999999988889999999999999999999999999999999999999954   345999999998754322 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||||
T Consensus       180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  211 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMG  211 (353)
T ss_dssp             ------CCGGGCCHHHHHHHHCTTHHHHHHHH
T ss_pred             cccccCCCcCeEChhhcCCCCcCCccCCCcch
Confidence            2345689999999999974 599999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=1.3e-29  Score=159.04  Aligned_cols=107  Identities=26%  Similarity=0.390  Sum_probs=93.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++..... ..
T Consensus        84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECC---CCCEEEeeccchhhcccCCC
Confidence            799999999999988889999999999999999999999999999999999999954   34599999999876432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .++.++|+||||
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  192 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  192 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHH
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccch
Confidence            3345689999999999974 589999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.96  E-value=6.8e-30  Score=161.39  Aligned_cols=110  Identities=17%  Similarity=0.318  Sum_probs=92.0

Q ss_pred             CCCcCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe--------CCCCceEEEe
Q 033837            1 MKLCEEGELVDRIVA-----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN--------KKKSFSLKAI   67 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~--------~~~~~~~~l~   67 (110)
                      ||||++|+|.+++..     ...+++..+..++.|++.|+.|||+++|+||||||+||+++.        +.....+|++
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~  225 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI  225 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred             EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence            799999999999973     467999999999999999999999999999999999999964        1114569999


Q ss_pred             ecccceecC---Cccccccccccccccccccccc-cCCCccceeecC
Q 033837           68 DFGLSVFFR---PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        68 d~g~~~~~~---~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |||++..+.   .........||+.|+|||++.+ .++.++|+||||
T Consensus       226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  272 (365)
T 3e7e_A          226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVA  272 (365)
T ss_dssp             CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHH
T ss_pred             eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHH
Confidence            999997653   2223344678999999999985 489999999997

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=1.2e-29  Score=160.42  Aligned_cols=110  Identities=34%  Similarity=0.661  Sum_probs=97.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+.+.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....+|++|||++........
T Consensus       107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~  186 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA  186 (362)
T ss_dssp             ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence            69999999999998888899999999999999999999999999999999999997655455699999999877655444


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+ .++.++|+||||
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  217 (362)
T 2bdw_A          187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACG  217 (362)
T ss_dssp             CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence            455688999999999985 589999999987

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=5.1e-30  Score=169.83  Aligned_cols=104  Identities=19%  Similarity=0.202  Sum_probs=76.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||+|++|.+.+.+++++++.   .++.||+.||.|+|++||+||||||+|||++.   ...+||+|||+++..... .
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~---dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDA---RQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECT---TSCEEECCCTTEESCC---C
T ss_pred             EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECC---CCCEEEeecccCeeCCCCCc
Confidence            8999999999999988888765   47899999999999999999999999999954   345999999998766433 2


Q ss_pred             ccccccccccccccccccccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....+||+.|++||++.+.+...+|+||+|
T Consensus       395 ~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g  425 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAENKSWNGFWRSAP  425 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC--------------
T ss_pred             cccCceechhhccHHHhCCCCCCcccccccc
Confidence            2345689999999999998888889999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=1.2e-29  Score=160.08  Aligned_cols=107  Identities=22%  Similarity=0.333  Sum_probs=93.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++..... ..
T Consensus       100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~---~g~vkL~DFG~a~~~~~~~~  176 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGV  176 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCCCCTTC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcC---CCcEEEEeCCcccccccCCc
Confidence            799999999999988889999999999999999999999999999999999999954   34599999999876432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .++.++|+||||
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  208 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG  208 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHH
T ss_pred             ccccccCCccccChhhhcCCCcCCcccccchH
Confidence            3345689999999999974 589999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=1.5e-29  Score=158.31  Aligned_cols=107  Identities=36%  Similarity=0.659  Sum_probs=94.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+++++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++........
T Consensus        93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~---~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECSTTCCGGGSSSCG
T ss_pred             EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcC---CCCEEEeeccCceecCCCCc
Confidence            699999999999988889999999999999999999999999999999999999953   44599999999877665555


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ....+|++.|+|||++.+. + +.++|+||+|
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  201 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG  201 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHH
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhH
Confidence            5567899999999999743 4 4789999987

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=9.3e-30  Score=162.71  Aligned_cols=110  Identities=33%  Similarity=0.554  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  ..+++..+..++.|++.|+.|||+++++||||+|+||+++..+....+||+|||++......
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            6999999999999765  35999999999999999999999999999999999999975433567999999999876554


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ......+||+.|+|||++. ..|+.++|+||||
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  250 (400)
T 1nxk_A          218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG  250 (400)
T ss_dssp             ---------CTTCCGGGSCCCCSSSHHHHHHHH
T ss_pred             CccccCCCCCCccCHhhcCCCCCCCcccHHHHH
Confidence            4445567899999999997 4589999999987

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.1e-29  Score=158.53  Aligned_cols=107  Identities=26%  Similarity=0.354  Sum_probs=93.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      ||||++|+|.+++.+.+.+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++..... ..
T Consensus        97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK---DGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCCCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECC---CCCEEEeEChhhhhcccCCC
Confidence            799999999999988889999999999999999999999999999999999999954   34599999999876432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .++.++|+||+|
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  205 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG  205 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccCCCCCcccCChhhhcCCCCCChhhhHHHH
Confidence            3345688999999999985 489999999987

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=3.7e-29  Score=161.80  Aligned_cols=110  Identities=35%  Similarity=0.648  Sum_probs=96.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+.+...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.......+|++|||++........
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~  168 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ  168 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence            69999999999999889999999999999999999999999999999999999997544456799999999877654322


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....|++.|+|||++.+ .|+.++|+||+|
T Consensus       169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG  200 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG  200 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             eeecccCCcccCCHHHhcCCCCCCccccHHHH
Confidence             344678999999999985 589999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=2.4e-29  Score=159.71  Aligned_cols=107  Identities=24%  Similarity=0.348  Sum_probs=93.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++..... ..
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~---~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCCCBCGGGBCCCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC---CCCEEEeeCccccccccCCC
Confidence            799999999999988889999999999999999999999999999999999999954   34599999999876432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .++.++|+||||
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  226 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG  226 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHH
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHH
Confidence            3345689999999999985 489999999987

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=2.9e-29  Score=157.86  Aligned_cols=107  Identities=21%  Similarity=0.360  Sum_probs=93.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++..... ..
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCGGGCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC---CCCEEEEeccccccccCCCC
Confidence            799999999999988889999999999999999999999999999999999999954   34599999999876432 22


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .++.++|+||||
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  197 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALG  197 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccCCCccccCccccCCCCCChHHhHHHHH
Confidence            3345688999999999985 589999999987

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=4.2e-29  Score=159.05  Aligned_cols=107  Identities=22%  Similarity=0.419  Sum_probs=94.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++........
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~---~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDE---HGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCTTCC
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECC---CCCEEEeccceeeeccCCCc
Confidence            699999999999998889999999999999999999999999999999999999954   44599999999987765555


Q ss_pred             cccccccccccccccccc----cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                      ....+||+.|+|||++..    .|+.++|+||||
T Consensus       171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG  204 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLG  204 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHH
T ss_pred             eeccCCCccccCCeeeccCCCCCCCccceeechH
Confidence            556789999999999852    378899999987

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=2.9e-29  Score=168.87  Aligned_cols=107  Identities=22%  Similarity=0.333  Sum_probs=93.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC-cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP-RE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~-~~   79 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.||.|||+++|+||||||+||+++.   ...+||+|||++..... ..
T Consensus       421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~---~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECS---SSCEEECCCTTCEECCCTTC
T ss_pred             EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcC---CCcEEEeecceeeccccCCc
Confidence            799999999999998889999999999999999999999999999999999999954   34599999999876432 23


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||||
T Consensus       498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlG  529 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG  529 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHH
T ss_pred             ccccccCCCcccCHhhhcCCCCCccceEechH
Confidence            3445689999999999974 589999999987

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=3.5e-29  Score=158.32  Aligned_cols=110  Identities=30%  Similarity=0.525  Sum_probs=95.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC-CceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK-SFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~-~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||++..++. ...++++|||++.......
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~  173 (361)
T 2yab_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV  173 (361)
T ss_dssp             EECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC
Confidence            689999999999988889999999999999999999999999999999999999964331 2269999999998776554


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||+|
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  205 (361)
T 2yab_A          174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG  205 (361)
T ss_dssp             CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             ccccCCCCccEECchHHcCCCCCccccHHHHH
Confidence            4455679999999999984 589999999987

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=3.6e-29  Score=161.55  Aligned_cols=107  Identities=25%  Similarity=0.439  Sum_probs=92.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+ .+.+++..+..++.|++.|+.|||+++++||||||+||+++.   ...+||+|||++.......
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~---~g~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCTTS
T ss_pred             EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC---CCCEEEcchhhhhhcccCC
Confidence            799999999999987 578999999999999999999999999999999999999954   4469999999987664432


Q ss_pred             c--ccccccccccccccccc------ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      .  ....+||+.|+|||++.      +.|+.++|+||||
T Consensus       230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlG  268 (437)
T 4aw2_A          230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG  268 (437)
T ss_dssp             CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHH
T ss_pred             CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHH
Confidence            2  23357999999999985      2488999999987

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=3.2e-29  Score=163.36  Aligned_cols=110  Identities=37%  Similarity=0.693  Sum_probs=95.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+.+.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++..+....+|++|||++........
T Consensus       100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  179 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK  179 (486)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence            68999999999998888999999999999999999999999999999999999996555556799999999876655444


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+.|+.++|+||+|
T Consensus       180 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG  209 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAG  209 (486)
T ss_dssp             --CCTTGGGGCCGGGGGSCCCHHHHHHHHH
T ss_pred             cCCCcCCCCCCCHHHhCCCCCchhhHHHHH
Confidence            455678999999999988899999999987

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=2.9e-29  Score=163.82  Aligned_cols=110  Identities=37%  Similarity=0.698  Sum_probs=98.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+.+.....+++..+..++.|++.|+.|||+++++||||+|+||+++..+....+|++|||++........
T Consensus       115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            68999999999998888999999999999999999999999999999999999997655456699999999987765554


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+.|+.++|+||+|
T Consensus       195 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG  224 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIG  224 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHH
T ss_pred             ccccCCCcCeeCHHHHcccCCCchhHHHHH
Confidence            555689999999999887799999999987

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.95  E-value=8.3e-29  Score=154.35  Aligned_cols=105  Identities=26%  Similarity=0.426  Sum_probs=92.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++......  
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~g~~kL~Dfg~a~~~~~~--  159 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK---NGHIKITDFGFAKYVPDV--  159 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT---TSCEEECCCSSCEECSSC--
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcC---CCCEEEeecCcceecCCc--
Confidence            799999999999998889999999999999999999999999999999999999954   445999999998765432  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....+||+.|+|||++.+ .++.++|+||||
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  190 (318)
T 1fot_A          160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFG  190 (318)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHH
T ss_pred             cccccCCccccCHhHhcCCCCCcccchhhhH
Confidence            234578999999999874 489999999987

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=6.9e-29  Score=154.96  Aligned_cols=110  Identities=35%  Similarity=0.640  Sum_probs=78.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+....... 
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           85 MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             ECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred             EEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence            6999999999999988899999999999999999999999999999999999999765555579999999987654432 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||++.+ .++.++|+||+|
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  196 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLG  196 (325)
T ss_dssp             -------------------CCCCHHHHHHHHH
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHH
Confidence            2344577899999999974 589999999987

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.95  E-value=6.5e-29  Score=162.52  Aligned_cols=110  Identities=38%  Similarity=0.704  Sum_probs=98.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+.+...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.++....++++|||++........
T Consensus       125 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  204 (504)
T 3q5i_A          125 TEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK  204 (504)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc
Confidence            68999999999998888999999999999999999999999999999999999997655445699999999987765544


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+.++.++|+||+|
T Consensus       205 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG  234 (504)
T 3q5i_A          205 LRDRLGTAYYIAPEVLKKKYNEKCDVWSCG  234 (504)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHH
T ss_pred             cccccCCcCCCCHHHhccCCCchHHHHHHH
Confidence            455678999999999987899999999987

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=3.8e-29  Score=162.85  Aligned_cols=110  Identities=33%  Similarity=0.653  Sum_probs=97.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.+|+|.+.+...+.+++..+..++.|++.|+.|||+++++||||+|+||+++..+....+|++|||++........
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence            68999999999999888999999999999999999999999999999999999996544456799999999877655444


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+.|+.++|+||+|
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG  214 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHGTYDEKCDVWSTG  214 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHTCCCTHHHHHHHH
T ss_pred             cccCCCCccccCceeecCCCCCcceeHHHH
Confidence            455678999999999988899999999987

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=9.9e-29  Score=154.26  Aligned_cols=110  Identities=30%  Similarity=0.514  Sum_probs=95.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.++ ....++++|||++.......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~  172 (326)
T 2y0a_A           93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  172 (326)
T ss_dssp             EECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC
Confidence            68999999999998888899999999999999999999999999999999999996543 23369999999998765444


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  204 (326)
T 2y0a_A          173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG  204 (326)
T ss_dssp             CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred             ccccccCCcCcCCceeecCCCCCcHHHHHHHH
Confidence            4445678999999999974 589999999987

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=1.1e-28  Score=155.56  Aligned_cols=105  Identities=24%  Similarity=0.382  Sum_probs=92.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||++......  
T Consensus       120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECSSC--
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECC---CCCEEEcccccceeccCC--
Confidence            689999999999988888999999999999999999999999999999999999954   345999999998776443  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....+||+.|+|||++.+ .++.++|+||||
T Consensus       195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  225 (350)
T 1rdq_E          195 TWTLCGTPEALAPEIILSKGYNKAVDWWALG  225 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccCCccccCHHHhcCCCCCCcCCEeccc
Confidence            234578999999999874 589999999987

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=9.2e-29  Score=158.68  Aligned_cols=107  Identities=26%  Similarity=0.462  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+. ..+++..+..++.|++.|+.|||+++++||||||+||+++.   ...+|++|||++.......
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~---~g~vkL~DFGla~~~~~~~  216 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR---CGHIRLADFGSCLKLRADG  216 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCTTS
T ss_pred             EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC---CCCEEEeechhheeccCCC
Confidence            7999999999999764 58999999999999999999999999999999999999954   4459999999987764433


Q ss_pred             c--ccccccccccccccccc--------ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK--------RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~--------~~~~~~~d~wslg  110 (110)
                      .  ....+||+.|+|||++.        +.|+.++|+||||
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlG  257 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG  257 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHH
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHh
Confidence            2  22357899999999986        2488999999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=1.3e-28  Score=163.02  Aligned_cols=107  Identities=27%  Similarity=0.402  Sum_probs=93.5

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...+  .+++..+..++.|++.|+.|||+++|+||||+|+||+++.   ...+||+|||++......
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~---~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC---CCCeEEEecccceecccC
Confidence            79999999999997654  4999999999999999999999999999999999999954   445999999999877554


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+||+.|+|||++.+ .|+.++|+||||
T Consensus       340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLG  372 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG  372 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHH
T ss_pred             ccccccCCCccccCHHHHcCCCCCccchHHHHH
Confidence            44455689999999999985 589999999987

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=1.7e-28  Score=149.77  Aligned_cols=110  Identities=43%  Similarity=0.766  Sum_probs=97.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||++..++....++++|||.+........
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~  164 (277)
T 3f3z_A           85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM  164 (277)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence            68999999999998888899999999999999999999999999999999999995444455699999999887665544


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+.++.++|+||||
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG  194 (277)
T 3f3z_A          165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAG  194 (277)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTTHHHHHHH
T ss_pred             hhccCCCCCccChHHhcccCCchhhehhHH
Confidence            455678999999999987789999999987

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=1.2e-28  Score=155.19  Aligned_cols=110  Identities=42%  Similarity=0.714  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++..+....++++|||++........
T Consensus       127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence            69999999999998888899999999999999999999999999999999999996533456799999999876654433


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+ .++.++|+||||
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  237 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVG  237 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHH
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHH
Confidence            345678999999999975 589999999987

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=1.7e-28  Score=158.52  Aligned_cols=107  Identities=26%  Similarity=0.386  Sum_probs=91.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      ||||++|+|.+++.....+++..+..++.|++.||.|||+ ++|+||||+|+||+++.   ...+||+|||++...... 
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~---~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECS---SSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECC---CCCEEEccCCCceeccCCC
Confidence            7999999999999888899999999999999999999998 89999999999999954   345999999998754322 


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+||+.|+|||++.+ .++.++|+||||
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  336 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  336 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHH
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhH
Confidence            22345678999999999874 589999999987

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.6e-28  Score=153.14  Aligned_cols=109  Identities=25%  Similarity=0.480  Sum_probs=94.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++.++..++.|++.|+.|||+++++|+||+|+||+++..+ ...++++|||.+.......
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTC
T ss_pred             EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCC-CCCEEEEECCCCeECCCCC
Confidence            6999999999999765 4799999999999999999999999999999999999996421 3569999999998776555


Q ss_pred             cccccccccccccccccccc-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~-~~~~~d~wslg  110 (110)
                      ......+++.|+|||++.+. ++.++|+||+|
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  190 (321)
T 1tki_A          159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG  190 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHH
T ss_pred             ccccccCChhhcCcHHhcCCCCCchhhHHHHH
Confidence            44556789999999999854 78899999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=2.2e-28  Score=153.48  Aligned_cols=106  Identities=37%  Similarity=0.650  Sum_probs=92.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +|+|.+++.+.+.+++.++..++.|++.|+.|||+++++||||+|+||+++   ....+|++|||++........
T Consensus        88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~DFG~s~~~~~~~~  163 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNF  163 (336)
T ss_dssp             ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCEEECCSSCTBTTTTSBT
T ss_pred             EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCEEEEEeccceeccCCcc
Confidence            6899 689999998888999999999999999999999999999999999999995   344599999999887665554


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ....+|++.|+|||++.+. + +.++|+||+|
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  195 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG  195 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHH
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHH
Confidence            5566899999999999754 4 7789999987

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=1.8e-28  Score=157.28  Aligned_cols=106  Identities=30%  Similarity=0.461  Sum_probs=90.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.. ..+++..+..++.|++.|+.|||+++|+||||+|+||+++.   ...+||+|||++........
T Consensus       148 ~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~---~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             ECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCTTSE
T ss_pred             EeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECC---CCCEEEeccceeEeeccCCc
Confidence            799999999998865 57999999999999999999999999999999999999954   44599999999977654332


Q ss_pred             --cccccccccccccccccc-c----CCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-N----YGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-~----~~~~~d~wslg  110 (110)
                        ....+||+.|+|||++.+ .    |+.++|+||||
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlG  260 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  260 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHH
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecch
Confidence              235689999999999863 2    67899999997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=4.6e-28  Score=148.27  Aligned_cols=110  Identities=34%  Similarity=0.661  Sum_probs=96.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+.+.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+........
T Consensus        84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA  163 (284)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence            68999999999998888899999999999999999999999999999999999997655556699999999877665544


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (284)
T 3kk8_A          164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACG  194 (284)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             ccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence            455678999999999875 488999999987

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.95  E-value=2.8e-28  Score=153.57  Aligned_cols=110  Identities=32%  Similarity=0.556  Sum_probs=93.2

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||||++|+|.+.+.+.    ..+++..+..++.|++.|+.|||+++++||||+|+||+++.++....+|++|||++....
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~  184 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG  184 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence            6999999999887542    358999999999999999999999999999999999999765555669999999987765


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....||+.|+|||++.+ .++.++|+||+|
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  220 (351)
T 3c0i_A          185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG  220 (351)
T ss_dssp             TTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             CCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHH
Confidence            4332 334578999999999974 589999999987

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.95  E-value=1.7e-28  Score=154.24  Aligned_cols=110  Identities=35%  Similarity=0.609  Sum_probs=94.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC-CCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~-~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||++... +....+|++|||++.......
T Consensus        95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            7999999999999888899999999999999999999999999999999999998543 233459999999988764332


Q ss_pred             -ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....++++.|+|||++.+ .|+.++|+||||
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  207 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLG  207 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHh
Confidence             2344578999999999975 488899999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=3.9e-28  Score=149.66  Aligned_cols=107  Identities=23%  Similarity=0.390  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+++++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+........
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS---NKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCCSSSTTC-----
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEEeCCCccccccccc
Confidence            689999999999988889999999999999999999999999999999999999954   34599999998876543221


Q ss_pred             --cccccccccccccccccc-cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        .....|++.|+|||.+.+ .++.++|+||+|
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  199 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG  199 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHH
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHH
Confidence              233568999999999875 488899999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=5.8e-28  Score=149.90  Aligned_cols=106  Identities=26%  Similarity=0.338  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++.......
T Consensus       136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~---~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECG---GGCEEECCCTTCEECC---
T ss_pred             Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC---CCCEEEccceeeeecccCC
Confidence            5888 56898888654 56999999999999999999999999999999999999943   4569999999987765544


Q ss_pred             ccccccccccccccccccccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+.++.++|+||||
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG  242 (311)
T 3p1a_A          212 AGEVQEGDPRYMAPELLQGSYGTAADVFSLG  242 (311)
T ss_dssp             ---CCCCCGGGCCGGGGGTCCSTHHHHHHHH
T ss_pred             CCcccCCCccccCHhHhcCCCCchhhHHHHH
Confidence            4444578999999999988899999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=1e-28  Score=158.71  Aligned_cols=110  Identities=31%  Similarity=0.553  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++..+....+|++|||++........
T Consensus       218 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~  297 (419)
T 3i6u_A          218 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL  297 (419)
T ss_dssp             EECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc
Confidence            68999999999998888999999999999999999999999999999999999997555455699999999887655444


Q ss_pred             ccccccccccccccccc----ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.    ..++.++|+||||
T Consensus       298 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG  331 (419)
T 3i6u_A          298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG  331 (419)
T ss_dssp             -------CTTCCTTTTC----CTTHHHHHHHHHH
T ss_pred             ccccCCCCCccCceeeecCCCCCCCchhhhHhHH
Confidence            45567899999999985    2377899999987

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=7.9e-28  Score=148.99  Aligned_cols=107  Identities=25%  Similarity=0.395  Sum_probs=90.0

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.. ...+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRE---NKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECT---TSCEEECCCTTCEECC---
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECC---CCCEEEeecccceeccccc
Confidence            689999999999987 577999999999999999999999999999999999999953   4459999999987653322


Q ss_pred             cc---------------ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF---------------NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---------------~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..               ....|++.|+|||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  209 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG  209 (310)
T ss_dssp             -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHH
Confidence            11               13468999999999985 589999999987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.94  E-value=7.2e-28  Score=158.77  Aligned_cols=107  Identities=22%  Similarity=0.350  Sum_probs=92.2

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||++||+|.+++...    ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++....
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~---~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD---DGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC---CCCEEEeecceeeecc
Confidence            7999999999998753    46999999999999999999999999999999999999954   4459999999998765


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... ....+||+.|+|||++.+ .|+.++|+||||
T Consensus       341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlG  376 (543)
T 3c4z_A          341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALG  376 (543)
T ss_dssp             TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHH
T ss_pred             CCCcccccccCCccccChhhhcCCCCChHHhcCcch
Confidence            4332 234589999999999985 489999999987

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.94  E-value=7.3e-28  Score=148.70  Aligned_cols=106  Identities=33%  Similarity=0.580  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.+. .+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++........
T Consensus        96 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECCSTTC
T ss_pred             EECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC---CCCEEEeeCCCceecCCccc
Confidence            6899999999998654 6899999999999999999999999999999999999954   34599999999877654322


Q ss_pred             -cccccccccccccccccc-cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       .....|++.|+|||.+.+ .++.++|+||+|
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  203 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  203 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHH
T ss_pred             ccCCccCCcCccChhhhcCCCCCcHHHHHHHH
Confidence             334578999999999874 589999999987

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.94  E-value=4.2e-28  Score=148.86  Aligned_cols=110  Identities=37%  Similarity=0.648  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+.+..    ...+++..+..++.|++.|+.|||+++++|+||+|+||++...+....++++|||.+....
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            699999999998853    3679999999999999999999999999999999999999654445679999999987665


Q ss_pred             CccccccccccccccccccccccCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .........+++.|+|||.+.+.++.++|+||||
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG  212 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAG  212 (285)
T ss_dssp             --------CTTGGGCCHHHHTTCCCHHHHHHHHH
T ss_pred             CcccCcCcccccCcCChHHhccCCCcccCeehHH
Confidence            4443445678999999999887788999999987

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.94  E-value=2.9e-28  Score=158.68  Aligned_cols=107  Identities=36%  Similarity=0.606  Sum_probs=94.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++........
T Consensus        95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~---~~~vkL~DFG~a~~~~~~~~  171 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEF  171 (476)
T ss_dssp             EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECT---TCCEEECCCSSCEECCTTCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEec---CCCeEEEeccchhhcccccc
Confidence            689999999999988889999999999999999999999999999999999999953   34599999999987765544


Q ss_pred             ccccccccccccccccccc--CCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN--YGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~--~~~~~d~wslg  110 (110)
                      ....+|++.|+|||++.+.  ++.++|+||+|
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG  203 (476)
T 2y94_A          172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSG  203 (476)
T ss_dssp             BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHH
T ss_pred             ccccCCCcCeEChhhccCCCCCCCcceehhhH
Confidence            4556899999999999854  36789999987

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.94  E-value=6.2e-28  Score=150.71  Aligned_cols=107  Identities=27%  Similarity=0.419  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++...... .
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~  176 (327)
T 3a62_A          100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH---QGHVKLTDFGLCKESIHDGT  176 (327)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT---TSCEEECCCSCC--------
T ss_pred             EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECC---CCcEEEEeCCcccccccCCc
Confidence            689999999999988888999999999999999999999999999999999999954   345999999988654322 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  208 (327)
T 3a62_A          177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLG  208 (327)
T ss_dssp             --CTTSSCCTTSCHHHHTTSCCCTHHHHHHHH
T ss_pred             cccccCCCcCccCHhhCcCCCCCCcccchhHH
Confidence            2334578999999999874 589999999987

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.1e-27  Score=148.82  Aligned_cols=110  Identities=25%  Similarity=0.463  Sum_probs=92.9

Q ss_pred             CCCcCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe-CCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN-KKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~-~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++....   .+++.++..++.|++.|+.|||+++++|+||+|+||++.. ++....+|++|||.+....
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            68999999999997543   3999999999999999999999999999999999999743 2344568999999998776


Q ss_pred             Ccccccccccccccccccccc---------ccCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLK---------RNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~---------~~~~~~~d~wslg  110 (110)
                      .........+++.|+|||++.         ..++.++|+||||
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG  210 (319)
T 4euu_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG  210 (319)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHH
T ss_pred             CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHH
Confidence            555445567899999999874         3478899999987

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=5.7e-28  Score=152.63  Aligned_cols=108  Identities=15%  Similarity=0.266  Sum_probs=90.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||| +++|.+++... +.+++..+..++.|++.|+.|||+++++||||+|+||+++.. ....+||+|||++..+....
T Consensus       131 ~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~-~~~~~kl~DFG~a~~~~~~~  208 (364)
T 3op5_A          131 MDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEG  208 (364)
T ss_dssp             EECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS-CTTCEEECCCTTCEESSGGG
T ss_pred             EeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC-CCCeEEEEECCcceecccCC
Confidence            6899 89999999775 689999999999999999999999999999999999999732 23469999999997764322


Q ss_pred             cc--------ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF--------NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--------~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..        ....||+.|+|||.+.+ .++.++|+||||
T Consensus       209 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  248 (364)
T 3op5_A          209 VHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILG  248 (364)
T ss_dssp             CCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHH
Confidence            11        22458999999999985 489999999987

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=2.3e-27  Score=146.77  Aligned_cols=106  Identities=25%  Similarity=0.436  Sum_probs=90.5

Q ss_pred             CCCcCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. |+|.+++.....  +++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        98 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~---~~~~kl~Dfg~a~~~~~~  173 (308)
T 3g33_A           98 FEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQ  173 (308)
T ss_dssp             EECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT---TSCEEECSCSCTTTSTTC
T ss_pred             ehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC---CCCEEEeeCccccccCCC
Confidence            57886 599999987643  999999999999999999999999999999999999953   445999999998766544


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......+++.|+|||++. ..++.++|+||||
T Consensus       174 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  206 (308)
T 3g33_A          174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG  206 (308)
T ss_dssp             CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHH
T ss_pred             cccCCccccccccCchHHcCCCCCchHHHHHHH
Confidence            4445567899999999987 4589999999987

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.94  E-value=5.7e-28  Score=154.00  Aligned_cols=109  Identities=30%  Similarity=0.497  Sum_probs=93.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+ ....++++|||++.......
T Consensus       127 ~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEecccceecCCCc
Confidence            6899999999998755 479999999999999999999999999999999999999532 23459999999998765544


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+|+.|+|||++.+ .++.++|+||||
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  237 (387)
T 1kob_A          206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIG  237 (387)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHH
T ss_pred             ceeeeccCCCccCchhccCCCCCCcccEeeHh
Confidence            4445578999999999974 488899999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.94  E-value=7.1e-28  Score=152.25  Aligned_cols=109  Identities=33%  Similarity=0.467  Sum_probs=83.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++...+++++..+..++.|++.|+.|||+++++||||+|+||+++..+ ...+|++|||++........
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~-~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS-SCCEEECCCCCC--------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-CceEEEeecCccccccccCC
Confidence            68999999999998888999999999999999999999999999999999999995322 23499999998875443333


Q ss_pred             cccccccccccccccccc-cCCC-ccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGP-EVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~-~~d~wslg  110 (110)
                      .....|++.|+|||++.+ .+.. ++|+||+|
T Consensus       174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  205 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCG  205 (361)
T ss_dssp             -------CTTSCHHHHHCSSCCHHHHHHHHHH
T ss_pred             CCCCcCCCCcCChhhhcCCCCCCCeeeeehhH
Confidence            345678999999999874 4544 48999987

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.1e-27  Score=149.76  Aligned_cols=107  Identities=26%  Similarity=0.432  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++........
T Consensus       138 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~~~~~  214 (355)
T 1vzo_A          138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADET  214 (355)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEESCSSEEEECCGGGG
T ss_pred             eecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCcEEEeeCCCCeecccCCC
Confidence            699999999999988888999999999999999999999999999999999999953   44699999999876543222


Q ss_pred             --cccccccccccccccccc---cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                        .....|++.|+|||++.+   .++.++|+||||
T Consensus       215 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG  249 (355)
T 1vzo_A          215 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG  249 (355)
T ss_dssp             GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHH
T ss_pred             CcccCcccCcCccChhhhcCCCCCCCchhhHHHHH
Confidence              233578999999999873   268899999987

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=2.7e-27  Score=147.24  Aligned_cols=107  Identities=32%  Similarity=0.519  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||++|+|.+++.....   ..+..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||.+.....
T Consensus       140 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~DfG~a~~~~~  216 (332)
T 3qd2_B          140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQ  216 (332)
T ss_dssp             EECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECSC
T ss_pred             EEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeC---CCCEEEeecCccccccc
Confidence            689999999999986543   566678999999999999999999999999999999954   34699999999887644


Q ss_pred             cc-------------ccccccccccccccccccc-cCCCccceeecC
Q 033837           78 RE-------------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~-------------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..             ......|++.|+|||.+.+ .++.++|+||||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  263 (332)
T 3qd2_B          217 DEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLG  263 (332)
T ss_dssp             C--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHH
T ss_pred             chhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHH
Confidence            31             1123468999999999975 589999999987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=2e-27  Score=147.85  Aligned_cols=110  Identities=30%  Similarity=0.525  Sum_probs=94.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC-CceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK-SFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~-~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.++. ...++++|||.+.......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~  173 (321)
T 2a2a_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV  173 (321)
T ss_dssp             ECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc
Confidence            689999999999988888999999999999999999999999999999999999964431 1259999999988765544


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  205 (321)
T 2a2a_A          174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG  205 (321)
T ss_dssp             CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cccccCCCCCccCcccccCCCCCCccccHHHH
Confidence            4445678999999999874 589999999987

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=5.7e-28  Score=149.82  Aligned_cols=107  Identities=22%  Similarity=0.426  Sum_probs=85.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++.++..++.|++.|+.|+|+++++|+||+|+||+++.+   ..++++|||.+....... 
T Consensus        95 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~  171 (311)
T 3ork_A           95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGN  171 (311)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT---SCEEECCCSCC--------
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC---CCEEEeeccCccccccccc
Confidence            6899999999999888899999999999999999999999999999999999999654   349999999987654322 


Q ss_pred             ---ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         ......|++.|+|||.+.+ .++.++|+||||
T Consensus       172 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  206 (311)
T 3ork_A          172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG  206 (311)
T ss_dssp             ----------CCTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred             ccccccccCcCcccCCHHHhcCCCCCchHhHHHHH
Confidence               1223468999999999975 588899999987

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=2.9e-27  Score=149.61  Aligned_cols=107  Identities=35%  Similarity=0.671  Sum_probs=93.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||+.+++|+|++|.||+++.   ...++++|||++..+.....
T Consensus       179 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~---~~~ikl~DfG~~~~~~~~~~  255 (365)
T 2y7j_A          179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD---NMQIRLSDFGFSCHLEPGEK  255 (365)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCCTTCEECCTTCC
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEEEecCcccccCCCcc
Confidence            699999999999988888999999999999999999999999999999999999953   44599999999887765444


Q ss_pred             cccccccccccccccccc-------cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-------NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-------~~~~~~d~wslg  110 (110)
                      .....|++.|+|||++.+       .++.++|+||||
T Consensus       256 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  292 (365)
T 2y7j_A          256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG  292 (365)
T ss_dssp             BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHH
T ss_pred             cccCCCCCCccChhhccccccccCcCCCchhhHHhHH
Confidence            455688999999998852       377899999987

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.94  E-value=2.5e-27  Score=153.46  Aligned_cols=106  Identities=26%  Similarity=0.426  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. |+|.+++.....+++..+..++.|++.||.|||+++|+||||||+||+++.   ...+||+|||+++...... 
T Consensus       136 ~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~~~  211 (458)
T 3rp9_A          136 LEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ---DCSVKVCDFGLARTVDYPEN  211 (458)
T ss_dssp             ECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TCCEEECCCTTCBCTTSCTT
T ss_pred             Eeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECC---CCCEeecccccchhccCccc
Confidence            57775 699999988888999999999999999999999999999999999999954   4459999999987653211 


Q ss_pred             ---------------------------cccccccccccccccccc--ccCCCccceeecC
Q 033837           80 ---------------------------QFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        80 ---------------------------~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                                                 .....+||+.|+|||++.  ..|+.++|+||||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG  271 (458)
T 3rp9_A          212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG  271 (458)
T ss_dssp             CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHH
Confidence                                       123357899999999764  4589999999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=2.3e-27  Score=148.64  Aligned_cols=107  Identities=29%  Similarity=0.567  Sum_probs=92.3

Q ss_pred             CCCcCCC-CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEG-ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g-~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+| +|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||.+.......
T Consensus       108 ~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~a~~~~~~~  184 (335)
T 3dls_A          108 MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE---DFTIKLIDFGSAAYLERGK  184 (335)
T ss_dssp             EECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TSCEEECCCTTCEECCTTC
T ss_pred             EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcC---CCcEEEeecccceECCCCC
Confidence            5788766 99999988889999999999999999999999999999999999999954   4469999999998776554


Q ss_pred             cccccccccccccccccccc-C-CCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+. + +.++|+||||
T Consensus       185 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  217 (335)
T 3dls_A          185 LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLG  217 (335)
T ss_dssp             CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHH
T ss_pred             ceeccCCCccccChhhhcCCCCCCCcccchhHH
Confidence            44556789999999998743 4 7789999987

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=4.1e-27  Score=143.90  Aligned_cols=107  Identities=27%  Similarity=0.504  Sum_probs=92.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++...  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+   ..++++|||.+......
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B           99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT---KQVKIGDFGLVTSLKND  175 (284)
T ss_dssp             ECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEESSCC
T ss_pred             EeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC---CCEEECcchhheecccc
Confidence            6899999999999754  679999999999999999999999999999999999999654   35999999998776554


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+.+ .++.++|+||||
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  208 (284)
T 2a19_B          176 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALG  208 (284)
T ss_dssp             SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHH
T ss_pred             ccccccCCcccccChhhhccCCCcchhhhHHHH
Confidence            43444578899999999874 488999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=1.1e-27  Score=149.84  Aligned_cols=104  Identities=14%  Similarity=0.191  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCCceEEEeCCC-----------------Cc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKK-----------------SF   62 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~~l~~~~il~~~~~~-----------------~~   62 (110)
                      ||||++|++.+.+.+ ..+++..+..++.|++.|+.||| +++|+||||||+||+++.++.                 ..
T Consensus       141 ~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~  219 (336)
T 2vuw_A          141 LEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGL  219 (336)
T ss_dssp             EEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTE
T ss_pred             EEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCc
Confidence            689999987776643 67899999999999999999999 999999999999999986541                 23


Q ss_pred             eEEEeecccceecCCccccccccccccccccccccccCCCccceeec
Q 033837           63 SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM  109 (110)
Q Consensus        63 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~d~wsl  109 (110)
                      .+||+|||+++.....    ...||+.|+|||++.+..+.++|+||+
T Consensus       220 ~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g~~~~~~Diwsl  262 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTGDGDYQFDIYRL  262 (336)
T ss_dssp             EEEECCCTTCBEEETT----EEECCCCTTCSGGGCCCSSHHHHHHHH
T ss_pred             eEEEeeccccEecCCC----cEEEeecccChhhhcCCCccceehhhh
Confidence            6999999999765432    347899999999998766889999996

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=1e-27  Score=149.17  Aligned_cols=110  Identities=31%  Similarity=0.553  Sum_probs=94.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+........
T Consensus        93 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  172 (322)
T 2ycf_A           93 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL  172 (322)
T ss_dssp             EECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH
T ss_pred             EecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccc
Confidence            68999999999998888899999999999999999999999999999999999997554445699999999877654433


Q ss_pred             ccccccccccccccccc----ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                      .....+++.|+|||++.    ..++.++|+||||
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  206 (322)
T 2ycf_A          173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG  206 (322)
T ss_dssp             HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHH
T ss_pred             cccccCCcCccCchhhccCCCCCCCchhhHHHHH
Confidence            34457899999999873    3478899999987

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=1.4e-27  Score=148.01  Aligned_cols=110  Identities=26%  Similarity=0.466  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....+|++|||++....... 
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence            6899999999999888889999999999999999999999999999999999999755444558999999876543211 


Q ss_pred             -------cccccccccccccccccc------ccCCCccceeecC
Q 033837           80 -------QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 -------~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                             ......|++.|+|||++.      ..++.++|+||||
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  213 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG  213 (316)
T ss_dssp             ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHH
T ss_pred             cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHH
Confidence                   112345899999999985      2378999999987

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=2.3e-27  Score=150.50  Aligned_cols=109  Identities=35%  Similarity=0.544  Sum_probs=93.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||++..++ ...+|++|||++.......
T Consensus       165 ~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          165 MEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             EECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT-TTEEEECCCSSCEECCTTC
T ss_pred             EeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC-CCcEEEEeCCCceecCCcc
Confidence            6899999999988654 5799999999999999999999999999999999999986432 3569999999998776554


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  275 (373)
T 2x4f_A          244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVG  275 (373)
T ss_dssp             BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHH
T ss_pred             ccccccCCCcEeChhhccCCCCCcHHhHHHHH
Confidence            4445678999999999874 588899999987

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.94  E-value=3.5e-27  Score=149.49  Aligned_cols=107  Identities=21%  Similarity=0.283  Sum_probs=89.1

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++....                .+++.++..++.|++.|+.|||+++++||||+|+||+++.   ...+
T Consensus       166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~  242 (370)
T 2psq_A          166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE---NNVM  242 (370)
T ss_dssp             EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCE
T ss_pred             EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC---CCCE
Confidence            68999999999997643                4789999999999999999999999999999999999954   4459


Q ss_pred             EEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |++|||++........   .....+++.|+|||++.+ .++.++|+||||
T Consensus       243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG  292 (370)
T 2psq_A          243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  292 (370)
T ss_dssp             EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHH
T ss_pred             EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHH
Confidence            9999999886643322   122355778999999874 589999999987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=3.7e-27  Score=147.15  Aligned_cols=109  Identities=16%  Similarity=0.260  Sum_probs=90.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC--CceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK--SFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~--~~~~~l~d~g~~~~~~~   77 (110)
                      |||+ +++|.+++.. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.++.  ...++++|||++.....
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            6899 8999999976 478999999999999999999999999999999999999954321  12399999999987543


Q ss_pred             ccc--------cccccccccccccccccc-cCCCccceeecC
Q 033837           78 REQ--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...        .....||+.|+|||++.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  204 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALG  204 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHH
Confidence            221        134578999999999985 488999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=151.55  Aligned_cols=110  Identities=16%  Similarity=0.179  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAK-------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      ||||++|+|.+++...       ..+++.++..++.|++.|+.|||+++++||||+|+||+++.++....+|++|||++.
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            6899999999999754       358999999999999999999999999999999999999755555579999999887


Q ss_pred             ecCCcc---cccccccccccccccccc-ccCCCccceeecC
Q 033837           74 FFRPRE---QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~---~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ......   ......+++.|+|||++. ..++.++|+||||
T Consensus       233 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG  273 (367)
T 3l9p_A          233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG  273 (367)
T ss_dssp             HHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHH
Confidence            542211   122346688899999987 4589999999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=3.3e-27  Score=144.88  Aligned_cols=110  Identities=37%  Similarity=0.693  Sum_probs=95.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+.+.....+++..+..++.|++.|+.+||+++++|+||+|+||+++..+....++++|||.+........
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~  179 (287)
T 2wei_A          100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK  179 (287)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred             EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence            68999999999998888899999999999999999999999999999999999997654455699999998876544433


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+.++.++|+||||
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~Di~slG  209 (287)
T 2wei_A          180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAG  209 (287)
T ss_dssp             CSCHHHHHTTCCHHHHTTCCCTHHHHHHHH
T ss_pred             cccccCcccccChHHhcCCCCCchhhHhHH
Confidence            344567889999999988889999999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.94  E-value=3.2e-27  Score=152.16  Aligned_cols=106  Identities=25%  Similarity=0.442  Sum_probs=87.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+. |+|.+++.....+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+||+|||+++...... 
T Consensus       109 ~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~  184 (432)
T 3n9x_A          109 LEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ---DCSVKVCDFGLARTINSEKD  184 (432)
T ss_dssp             EECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEEC-----
T ss_pred             EecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECC---CCCEEEccCCCccccccccc
Confidence            57776 599999988888999999999999999999999999999999999999954   4459999999988764321 


Q ss_pred             ----------------------cccccccccccccccccc--ccCCCccceeecC
Q 033837           80 ----------------------QFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        80 ----------------------~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                                            ......||+.|+|||++.  ..|+.++|+||+|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG  239 (432)
T 3n9x_A          185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG  239 (432)
T ss_dssp             --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHH
Confidence                                  124467899999999864  4589999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.94  E-value=1.5e-27  Score=148.88  Aligned_cols=110  Identities=25%  Similarity=0.418  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++...  ..+++.++..++.|++.|+.|||+++++|+||+|+||+++.......++++|||.+......
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence            6899999999988543  67999999999999999999999999999999999999965333456999999999876554


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......+++.|+|||++.+ .++.++|+||||
T Consensus       188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  220 (327)
T 3lm5_A          188 CELREIMGTPEYLAPEILNYDPITTATDMWNIG  220 (327)
T ss_dssp             ------CCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cccccccCCcCccCCeeecCCCCCchhhHHHHH
Confidence            44445678999999999974 588999999987

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=4.6e-27  Score=144.45  Aligned_cols=109  Identities=20%  Similarity=0.295  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++.. ...+++..+..++.|++.|+.|||+++++|+||+|+||+++..+....++++|||.+.......
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            6889 8899999974 4679999999999999999999999999999999999999533344569999999987764432


Q ss_pred             c--------cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .        .....|++.|+|||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  202 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG  202 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHH
Confidence            1        133578899999999985 588899999987

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=4.6e-27  Score=145.86  Aligned_cols=107  Identities=22%  Similarity=0.334  Sum_probs=82.3

Q ss_pred             CCCcCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGH---YTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+++.+.+.   +++..+..++.|++.|+.|||+++  ++|+||+|+||+++.   ...++++|||++...
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~---~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK---KYTVKVCDFGLSRLK  189 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT---TCCEEECCCC-----
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC---CCcEEECCCCCCccc
Confidence            689999999999976543   999999999999999999999999  999999999999953   446999999988754


Q ss_pred             CCccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           76 RPREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..... .....|++.|+|||.+.+ .++.++|+||||
T Consensus       190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  226 (309)
T 3p86_A          190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG  226 (309)
T ss_dssp             ------------CCTTSCHHHHTTCCCCTTHHHHHHH
T ss_pred             cccccccccCCCCccccChhhhcCCCCCchhhHHHHH
Confidence            33221 234578999999999985 488999999987

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=3.8e-27  Score=144.05  Aligned_cols=107  Identities=21%  Similarity=0.359  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC----------------C
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK----------------K   60 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~----------------~   60 (110)
                      |||+++++|.+++...    +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.++                .
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            6899999999999754    6799999999999999999999999999999999999996433                3


Q ss_pred             CceEEEeecccceecCCcccccccccccccccccccccc--CCCccceeecC
Q 033837           61 SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN--YGPEVDVWSML  110 (110)
Q Consensus        61 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~d~wslg  110 (110)
                      ...++++|||.+.......   ...+++.|+|||.+.+.  ++.++|+||||
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  218 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALA  218 (289)
T ss_dssp             CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHH
T ss_pred             ceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHH
Confidence            3468999999887764432   23578999999999754  55789999987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.93  E-value=7.3e-27  Score=143.67  Aligned_cols=109  Identities=19%  Similarity=0.311  Sum_probs=90.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+ +++|.+++... .++++..+..++.|++.|+.|||+++++|+||+|+||+++.++  ....++++|||.+.....
T Consensus        85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            6888 89999999865 4699999999999999999999999999999999999996542  233599999999887643


Q ss_pred             ccc--------cccccccccccccccccc-cCCCccceeecC
Q 033837           78 REQ--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ...        .....|++.|+|||.+.+ .++.++|+||||
T Consensus       164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  205 (298)
T 1csn_A          164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALG  205 (298)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHH
Confidence            321        233568899999999874 488999999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.93  E-value=3.4e-27  Score=148.43  Aligned_cols=89  Identities=24%  Similarity=0.277  Sum_probs=74.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc---ccccccccccccccc
Q 033837           19 YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEV   95 (110)
Q Consensus        19 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~   95 (110)
                      +++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++........   .....+++.|+|||+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  266 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  266 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC---CCcEEEEeccceeeecccccchhccccCCCceeEChhh
Confidence            889999999999999999999999999999999999953   44599999999876533221   223467888999999


Q ss_pred             cc-ccCCCccceeecC
Q 033837           96 LK-RNYGPEVDVWSML  110 (110)
Q Consensus        96 ~~-~~~~~~~d~wslg  110 (110)
                      +. ..++.++|+||||
T Consensus       267 ~~~~~~~~~~Di~slG  282 (359)
T 3vhe_A          267 IFDRVYTIQSDVWSFG  282 (359)
T ss_dssp             HHHCCCCHHHHHHHHH
T ss_pred             hcCCCCCchhhhhhHH
Confidence            87 4588999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=6.8e-27  Score=143.63  Aligned_cols=109  Identities=20%  Similarity=0.295  Sum_probs=90.7

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++.. ...+++..+..++.|++.|+.|||+++++|+||+|+||++...+....++++|||.+.......
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            6889 8899999975 4679999999999999999999999999999999999999433334569999999987764332


Q ss_pred             c--------cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .        .....+++.|+|||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  202 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG  202 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHH
Confidence            1        123578899999999985 588899999987

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=8.2e-27  Score=148.37  Aligned_cols=105  Identities=28%  Similarity=0.454  Sum_probs=85.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc--
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR--   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~--   78 (110)
                      ||||+ ++|.+.+.. +.+++..+..++.|++.|+.|||+.+++||||+|+||+++.   ...+|++|||+++.....  
T Consensus        90 ~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~---~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           90 FDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             EECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEESSSCCC
T ss_pred             ecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcC---CCCEEecCCccccccccccc
Confidence            68887 588888865 57999999999999999999999999999999999999954   445999999998765321  


Q ss_pred             --------------------cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 --------------------EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 --------------------~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                                          ......+||+.|+|||++.+  .++.++|+||+|
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG  218 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG  218 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHH
Confidence                                11233578999999999864  489999999987

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=1.7e-27  Score=149.55  Aligned_cols=108  Identities=18%  Similarity=0.244  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +++|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.++. ..++++|||++..+.....
T Consensus       131 ~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~~~kL~Dfg~a~~~~~~~~  208 (345)
T 2v62_A          131 MERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP-DQVYLADYGLSYRYCPNGN  208 (345)
T ss_dssp             EECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST-TSEEECCCTTCEESSGGGC
T ss_pred             Eecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC-CcEEEEeCCCceecccccc
Confidence            6899 8999999987778999999999999999999999999999999999999975431 2699999999977643211


Q ss_pred             --------cccccccccccccccccc-cCCCccceeecC
Q 033837           81 --------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 --------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                              .....|++.|+|||.+.+ .++.++|+||||
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  247 (345)
T 2v62_A          209 HKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILG  247 (345)
T ss_dssp             CCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred             cccchhccccccCCCccccCHHHhcCCCCCchhhHHHHH
Confidence                    133468899999999885 489999999997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.93  E-value=1.3e-27  Score=149.10  Aligned_cols=107  Identities=36%  Similarity=0.566  Sum_probs=90.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.....+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCCTTCEECEETTE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeC---CCCEEEEEeeccceeccCCc
Confidence            689999999999988788999999999999999999999999999999999999954   3459999999987653221 


Q ss_pred             --ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                        ......|++.|+|||++.+ . ++.++|+||||
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  195 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG  195 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHH
T ss_pred             ccccCCCccCcCccCcHHhccCCCCCCcccHHHHH
Confidence              1234578999999999874 3 46789999987

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.1e-26  Score=147.70  Aligned_cols=107  Identities=20%  Similarity=0.290  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++....                .+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...+
T Consensus       154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~  230 (382)
T 3tt0_A          154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE---DNVM  230 (382)
T ss_dssp             EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCE
T ss_pred             EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC---CCcE
Confidence            68999999999997643                4999999999999999999999999999999999999954   3459


Q ss_pred             EEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ||+|||++........   .....+++.|+|||++.+ .++.++|+||||
T Consensus       231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  280 (382)
T 3tt0_A          231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  280 (382)
T ss_dssp             EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHH
Confidence            9999999876643321   222456778999999874 488999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.93  E-value=1.9e-26  Score=141.64  Aligned_cols=107  Identities=23%  Similarity=0.339  Sum_probs=92.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+++  ++|+||+|+||+++.  ....++++|||.+......
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~~~~~~~  185 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCccccccc
Confidence            689999999999988888999999999999999999999999  999999999999952  3345999999988654332


Q ss_pred             cccccccccccccccccccccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+.++.++|+||+|
T Consensus       186 -~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG  216 (290)
T 1t4h_A          186 -FAKAVIGTPEFMAPEMYEEKYDESVDVYAFG  216 (290)
T ss_dssp             -SBEESCSSCCCCCGGGGGTCCCTHHHHHHHH
T ss_pred             -ccccccCCcCcCCHHHHhccCCCcchHHHHH
Confidence             2234568899999999887799999999987

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=5.9e-27  Score=144.14  Aligned_cols=107  Identities=21%  Similarity=0.296  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+   ..++++|||.+.......
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCSCC------
T ss_pred             EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC---CeEEEccCcccccccCCc
Confidence            6899999999999765 459999999999999999999999999999999999999654   359999999987664332


Q ss_pred             c----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    .....++..|+|||.+. ..++.++|+||||
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  204 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFG  204 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHH
Confidence            1    12234566799999987 4589999999987

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.93  E-value=1e-26  Score=142.98  Aligned_cols=106  Identities=25%  Similarity=0.515  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++ ++.+.+.. .+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCSCC
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeecccceecCCcc
Confidence            688876 66665554 578999999999999999999999999999999999999954   4459999999987764332


Q ss_pred             -ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                       ......+++.|+|||++.+ . ++.++|+||+|
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  189 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  189 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             ccccCCccccCCcChHHHcCCCCcCchHHHHHHH
Confidence             2334577899999999864 3 79999999987

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=3.2e-27  Score=145.44  Aligned_cols=106  Identities=27%  Similarity=0.345  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH--------KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      |||+++|+|.+++. ...+++..+..++.|++.|+.|||        +.+++||||+|+||+++.   ...+|++|||++
T Consensus        85 ~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~a  160 (301)
T 3q4u_A           85 THYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK---NGQCCIADLGLA  160 (301)
T ss_dssp             ECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT---TSCEEECCCTTC
T ss_pred             hhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC---CCCEEEeeCCCe
Confidence            68999999999984 457999999999999999999999        999999999999999953   446999999998


Q ss_pred             eecCCccc-----ccccccccccccccccccc-------CCCccceeecC
Q 033837           73 VFFRPREQ-----FNELVGSLYYMALEVLKRN-------YGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~-----~~~~~~~~~~~~pe~~~~~-------~~~~~d~wslg  110 (110)
                      ........     .....|++.|+|||.+.+.       ++.++|+||||
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG  210 (301)
T 3q4u_A          161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG  210 (301)
T ss_dssp             EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence            76543222     1224789999999998743       33589999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.93  E-value=2.8e-26  Score=144.48  Aligned_cols=107  Identities=23%  Similarity=0.352  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC--------------------
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK--------------------   58 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~--------------------   58 (110)
                      |||+ +++|.+++....  .+++..+..++.|++.|+.|||+++++||||+|+||+++..                    
T Consensus       115 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~  193 (360)
T 3llt_A          115 FEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI  193 (360)
T ss_dssp             ECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred             EcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccc
Confidence            6889 889999997653  59999999999999999999999999999999999999531                    


Q ss_pred             --CCCceEEEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           59 --KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        59 --~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        .....++++|||++......  .....|++.|+|||++.+ .++.++|+||||
T Consensus       194 ~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  246 (360)
T 3llt_A          194 YRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFG  246 (360)
T ss_dssp             EEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHH
Confidence              11446999999998764432  234578999999999974 589999999987

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.93  E-value=2e-26  Score=143.59  Aligned_cols=106  Identities=31%  Similarity=0.534  Sum_probs=90.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++. ...+++..+..++.|++.|+.|||+.+++|+||+|+||+++.   ...++++|||++....... 
T Consensus       121 ~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          121 MEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             ECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECCSSSC
T ss_pred             EecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCcEEEeeeeeeeecccCcc
Confidence            69999999999875 457999999999999999999999999999999999999953   3459999999987764432 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+ .++.++|+||||
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG  228 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLG  228 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             ccccccCCccccCHhhhcCCCCCchhhHHHHH
Confidence            2334578999999999974 588999999987

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.93  E-value=8.6e-27  Score=151.42  Aligned_cols=104  Identities=27%  Similarity=0.436  Sum_probs=81.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++ ++.+.+.  ..+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+||+|||++........
T Consensus       146 ~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~---~~~~kl~DFG~a~~~~~~~~  219 (464)
T 3ttj_A          146 MELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  219 (464)
T ss_dssp             EECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCCCCC-----CCC
T ss_pred             EeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeC---CCCEEEEEEEeeeecCCCcc
Confidence            688875 5666654  34899999999999999999999999999999999999954   44599999999987655444


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....||+.|+|||++.+ .|+.++|+||+|
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  250 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  250 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHH
Confidence            455788999999999985 589999999987

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=1.7e-26  Score=141.25  Aligned_cols=110  Identities=30%  Similarity=0.554  Sum_probs=90.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.+...+++..+..++.|++.|+.+||+++++|+||+|+||+++.++ ....++++|||.+.......
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~  166 (283)
T 3bhy_A           87 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN  166 (283)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---
T ss_pred             EeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC
Confidence            68999999999998888899999999999999999999999999999999999996543 22369999999987765444


Q ss_pred             cccccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+. ..++.++|+||||
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  198 (283)
T 3bhy_A          167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG  198 (283)
T ss_dssp             -----CCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cccccCCCcCccCcceecCCCCCcchhhhhHH
Confidence            344456889999999987 4588999999987

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=5.1e-27  Score=146.56  Aligned_cols=106  Identities=24%  Similarity=0.324  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH---------GVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      ||||++|+|.+++... ..++..+..++.|++.|+.|||+.         +++||||+|+||+++.   ...+|++|||+
T Consensus        91 ~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~---~~~~kL~DFG~  166 (336)
T 3g2f_A           91 MEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN---DGTCVISDFGL  166 (336)
T ss_dssp             ECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT---TSCEEECCCTT
T ss_pred             EecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC---CCcEEEeeccc
Confidence            6999999999999654 448889999999999999999999         9999999999999953   34699999999


Q ss_pred             ceecCCcc---------ccccccccccccccccccc--------cCCCccceeecC
Q 033837           72 SVFFRPRE---------QFNELVGSLYYMALEVLKR--------NYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~---------~~~~~~~~~~~~~pe~~~~--------~~~~~~d~wslg  110 (110)
                      +.......         ......||+.|+|||++.+        .++.++|+||||
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  222 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG  222 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence            87764321         1123468999999999864        255689999987

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.93  E-value=6e-27  Score=146.03  Aligned_cols=107  Identities=22%  Similarity=0.439  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||++.......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~---~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS---PSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESS---SSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECC---CCeEEECCCCcccccCccc
Confidence            6899999999999764 67999999999999999999999999999999999999954   4459999999987764332


Q ss_pred             c---ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .   .....+++.|+|||.+. +.++.++|+||||
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  204 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG  204 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhH
Confidence            1   22345677899999997 4589999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=2.9e-27  Score=150.95  Aligned_cols=110  Identities=26%  Similarity=0.469  Sum_probs=92.4

Q ss_pred             CCCcCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe-CCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN-KKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~-~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||||++|+|.+++....   .+++..+..++.|++.|+.|||+++++|+||+|+||++.. ++....+|++|||.+....
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            69999999999997542   3999999999999999999999999999999999999843 2344568999999998776


Q ss_pred             Cccccccccccccccccccccc---------cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR---------NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~---------~~~~~~d~wslg  110 (110)
                      .........|++.|+|||++.+         .++.++|+||||
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG  210 (396)
T 4eut_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG  210 (396)
T ss_dssp             CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHH
Confidence            5554455678999999998752         367789999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.93  E-value=1.8e-26  Score=146.83  Aligned_cols=107  Identities=17%  Similarity=0.230  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...++++|||.+......
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~---~~~~kl~dfg~~~~~~~~  181 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV---DGKVYLSGLRSNLSMISH  181 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCGGGCEECEET
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEcccccceeeccc
Confidence            6899999999999765  67999999999999999999999999999999999999953   346999999987654221


Q ss_pred             c--------ccccccccccccccccccc---cCCCccceeecC
Q 033837           79 E--------QFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        79 ~--------~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      .        ......|++.|+|||++.+   .++.++|+||||
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  224 (389)
T 3gni_B          182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG  224 (389)
T ss_dssp             TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred             cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence            1        1122467888999999874   488999999987

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.93  E-value=3.4e-27  Score=147.83  Aligned_cols=109  Identities=35%  Similarity=0.578  Sum_probs=77.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  ..+++.++..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+......
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~  184 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN  184 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence            6899999999999865  36999999999999999999999999999999999999976555567999999988765432


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      . .....+++.|+|||++.+ .++.++|+||||
T Consensus       185 ~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  216 (336)
T 3fhr_A          185 A-LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLG  216 (336)
T ss_dssp             --------------------CHHHHHHHHHHHH
T ss_pred             c-cccCCCCcCccChhhhCCCCCCchhhHHHHH
Confidence            2 234567899999999864 478899999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.93  E-value=2.6e-27  Score=150.21  Aligned_cols=103  Identities=14%  Similarity=0.088  Sum_probs=84.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCH-------HHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAKGHYTE-------RVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~-------~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      |||+ +|+|.+++...+.+++       ..+..++.|++.|+.|||+++++||||||+||+++.   ...+|++|||++.
T Consensus       179 ~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~---~~~~kL~DFG~a~  254 (377)
T 3byv_A          179 YPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQ---RGGVFLTGFEHLV  254 (377)
T ss_dssp             EECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCEEECCGGGCE
T ss_pred             Eecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEEechhhe
Confidence            6788 5799999986554554       778889999999999999999999999999999954   3469999999987


Q ss_pred             ecCCcccccccccccccccccccc-c-----------cCCCccceeecC
Q 033837           74 FFRPREQFNELVGSLYYMALEVLK-R-----------NYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~pe~~~-~-----------~~~~~~d~wslg  110 (110)
                      ....  ......| +.|+|||++. .           .++.++|+||||
T Consensus       255 ~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG  300 (377)
T 3byv_A          255 RDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG  300 (377)
T ss_dssp             ETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred             ecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence            6433  2234466 8999999987 4           589999999997

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.93  E-value=1.3e-26  Score=151.25  Aligned_cols=109  Identities=19%  Similarity=0.296  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+ +++|.+++.. ...+++..+..++.||+.||.|||+++|+||||+|+||++...+....++|+|||++.......
T Consensus        82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            6889 8899999975 4679999999999999999999999999999999999999533344569999999988764432


Q ss_pred             c--------cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .        .....|++.|++||.+.+ .++.++|+||||
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlG  200 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLG  200 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHH
Confidence            1        114578999999999985 588999999987

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=144.66  Aligned_cols=107  Identities=21%  Similarity=0.337  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... +.+++.++..++.|++.|+.|||+++++|+||+|+||+++   ....++++|||++.......
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCSSCEECC---
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CCCCEEECCCCcccccccCc
Confidence            6899999999999754 6899999999999999999999999999999999999994   34569999999988764332


Q ss_pred             c----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    .....+++.|+|||.+. ..++.++|+||||
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  241 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG  241 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHH
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHH
Confidence            1    11234567799999997 4588899999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=1.2e-26  Score=145.94  Aligned_cols=108  Identities=13%  Similarity=0.234  Sum_probs=90.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+ +++|.+++...  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++ ...++++|||++......
T Consensus       137 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~  214 (352)
T 2jii_A          137 LPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED-QSQVTLAGYGFAFRYCPS  214 (352)
T ss_dssp             EECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE-EEEEEECCGGGCBCSSGG
T ss_pred             ecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC-CceEEEecCcceeeccCC
Confidence            6899 89999999875  7899999999999999999999999999999999999996432 126999999998765432


Q ss_pred             cc--------cccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQ--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..        .....|++.|+|||.+.+ .++.++|+||||
T Consensus       215 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  255 (352)
T 2jii_A          215 GKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG  255 (352)
T ss_dssp             GCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             CccccccccccccccCCccccCHHHHccCCCCchhhHHHHH
Confidence            21        122478899999999985 588999999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.93  E-value=6.8e-27  Score=156.57  Aligned_cols=107  Identities=22%  Similarity=0.368  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.....+++..+..++.||+.|+.|||+++|+||||+|+||+++.++   .+||+|||++..+.....
T Consensus       448 ~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~---~~kL~DFGla~~~~~~~~  524 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADEN  524 (635)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT---EEEECCTTHHHHTTC---
T ss_pred             EEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC---CEEEEEcCCccccccCcc
Confidence            69999999999998888999999999999999999999999999999999999997543   599999999876643321


Q ss_pred             ----cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                          .....+++.|+|||++.+ .++.++|+||||
T Consensus       525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlG  559 (635)
T 4fl3_A          525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG  559 (635)
T ss_dssp             ----------CGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHH
Confidence                112345678999999974 589999999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.93  E-value=5.2e-27  Score=146.20  Aligned_cols=106  Identities=25%  Similarity=0.368  Sum_probs=88.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc----------CCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH----------GVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~----------~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      ||||++|+|.+++.. ..+++..+..++.|++.|+.|||+.          +++|+||+|+||+++   ....+|++|||
T Consensus       101 ~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~---~~~~~kL~DFg  176 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFG  176 (322)
T ss_dssp             EECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC---TTCCEEECCCT
T ss_pred             EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC---CCCeEEEccCC
Confidence            689999999999965 4599999999999999999999999          999999999999995   34469999999


Q ss_pred             cceecCCccc---cccccccccccccccccc------cCCCccceeecC
Q 033837           71 LSVFFRPREQ---FNELVGSLYYMALEVLKR------NYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~---~~~~~~~~~~~~pe~~~~------~~~~~~d~wslg  110 (110)
                      .+........   .....|++.|+|||++.+      .++.++|+||||
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  225 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG  225 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence            9977644322   223578999999999864      245678999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=1.2e-26  Score=144.86  Aligned_cols=107  Identities=23%  Similarity=0.324  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+|+|.+++.. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.++   .+|++|||++.......
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT---EEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC---CEEEccCcceeEccCCc
Confidence            578999999999976 46799999999999999999999999999999999999996543   59999999987664332


Q ss_pred             cc---ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   ....+++.|+|||.+.+ .++.++|+||||
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  206 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG  206 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhH
Confidence            21   22345778999999874 589999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.93  E-value=1.7e-26  Score=142.74  Aligned_cols=109  Identities=35%  Similarity=0.638  Sum_probs=92.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||++...+....++++|||.+...... .
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~  163 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-I  163 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-T
T ss_pred             EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-c
Confidence            689999999999988888999999999999999999999999999999999999954344556999999988654332 2


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (304)
T 2jam_A          164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIG  194 (304)
T ss_dssp             THHHHSCCCBCCTTTBSSCSCCHHHHHHHHH
T ss_pred             cccccCCCCccChHHhccCCCCchhhHHHHH
Confidence            233568899999999974 588899999987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=3.4e-26  Score=143.17  Aligned_cols=107  Identities=31%  Similarity=0.443  Sum_probs=92.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      |||+++++|.+++.....+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+...... .
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE---DLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcC---CCCEEEeeccCceecccCcc
Confidence            689999999999988888999999999999999999999999999999999999953   345999999998776432 2


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|++||.+.+ .++.++|+||||
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  228 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG  228 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHH
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHH
Confidence            2234568899999999874 478899999987

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=1e-26  Score=142.31  Aligned_cols=107  Identities=21%  Similarity=0.328  Sum_probs=80.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+   ..++++|||.+.......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC-----------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC---CCEEECccccccccCccc
Confidence            6899999999999765 479999999999999999999999999999999999999754   359999999887664432


Q ss_pred             cc--cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  ....+++.|+|||.+. ..++.++|+||||
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  204 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFG  204 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHH
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHH
Confidence            21  2234567899999987 4588899999987

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=1.7e-26  Score=149.51  Aligned_cols=105  Identities=21%  Similarity=0.337  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++.+.+  .+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++......
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~  342 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASST  342 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TSCEEECCCTTCEECC--
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC---CCCEEEeeCCCccccccc
Confidence            68999999999998654  3799999999999999999999999999999999999953   446999999998754332


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  ....+++.|+|||.+. ..++.++|+||||
T Consensus       343 ~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG  373 (450)
T 1k9a_A          343 Q--DTGKLPVKWTAPEALREKKFSTKSDVWSFG  373 (450)
T ss_dssp             ------CCCTTTSCHHHHHSSCCCHHHHHHHHH
T ss_pred             c--cCCCCCcceeCHHHhcCCCCCcHHHHHHHH
Confidence            1  1234577899999997 4589999999987

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.93  E-value=1.1e-26  Score=142.51  Aligned_cols=107  Identities=18%  Similarity=0.275  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCC-----ceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS-----FSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~-----~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++.+.. .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++..     ..++++|||.+..
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~  170 (289)
T 4fvq_A           91 QEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT  170 (289)
T ss_dssp             EECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTT
T ss_pred             EECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCccccc
Confidence            68999999999998764 49999999999999999999999999999999999999765432     1389999998765


Q ss_pred             cCCccccccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ....   ....+++.|+|||.+.+  .++.++|+||||
T Consensus       171 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  205 (289)
T 4fvq_A          171 VLPK---DILQERIPWVPPECIENPKNLNLATDKWSFG  205 (289)
T ss_dssp             TSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHH
T ss_pred             ccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHH
Confidence            4332   22456888999999874  488999999987

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.93  E-value=1.3e-26  Score=144.53  Aligned_cols=107  Identities=21%  Similarity=0.278  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.+..                .+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~---~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG---GGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC---CCeE
Confidence            69999999999997643                6999999999999999999999999999999999999953   4469


Q ss_pred             EEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +++|||++.............+++.|+|||.+.+ .++.++|+||||
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  228 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG  228 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHH
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHH
Confidence            9999998864432222223355778999999874 478999999987

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=2.8e-26  Score=140.21  Aligned_cols=106  Identities=25%  Similarity=0.484  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~---~~~~~l~Dfg~~~~~~~~~-  163 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-  163 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECT---TSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcC---CCCEEEEeccccccCCccc-
Confidence            689999999999988888999999999999999999999999999999999999954   4459999999875443322 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG  194 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHH
Confidence            234567899999999875 478899999987

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=2.9e-26  Score=145.68  Aligned_cols=107  Identities=24%  Similarity=0.425  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++ +|.+.+.    ....+++..+..++.|++.|+.|||+++++||||+|+||+++.  ....+|++|||.+....
T Consensus       117 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~  193 (383)
T 3eb0_A          117 MEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLI  193 (383)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECC
T ss_pred             EecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccC
Confidence            688984 7766664    3577999999999999999999999999999999999999963  23469999999998765


Q ss_pred             Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .........+++.|+|||.+.+  .++.++|+||+|
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  229 (383)
T 3eb0_A          194 PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIG  229 (383)
T ss_dssp             TTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             CCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence            5544455678999999998864  389999999987

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.2e-26  Score=144.18  Aligned_cols=107  Identities=21%  Similarity=0.272  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe
Q 033837            1 MKLCEEGELVDRIVAKG-----------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN   57 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-----------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~   57 (110)
                      |||+++|+|.+++....                       .+++..+..++.|++.|+.|||+++++|+||+|+||+++.
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~  207 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  207 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcC
Confidence            68999999999997542                       2789999999999999999999999999999999999964


Q ss_pred             CCCCceEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           58 KKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        58 ~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                         ...++++|||.+........   .....+++.|+|||.+. +.++.++|+||||
T Consensus       208 ---~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  261 (344)
T 1rjb_A          208 ---GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG  261 (344)
T ss_dssp             ---TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ---CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHH
Confidence               34699999999876543221   12345677899999987 4588999999987

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=6.9e-27  Score=147.98  Aligned_cols=104  Identities=13%  Similarity=0.164  Sum_probs=83.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHH------HHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVA------AAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      ||||+ |+|.+++... ..+.+...      ..++.|++.|+.|||+++++||||||+||+++.   ...+||+|||++.
T Consensus       167 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~---~~~~kL~DFG~a~  242 (371)
T 3q60_A          167 MPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMP---DGRLMLGDVSALW  242 (371)
T ss_dssp             ECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECT---TSCEEECCGGGEE
T ss_pred             ecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECC---CCCEEEEecceee
Confidence            68998 8999999764 33444444      567799999999999999999999999999954   3459999999987


Q ss_pred             ecCCccccccccccccccccccccc---cCCCccceeecC
Q 033837           74 FFRPREQFNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ......  ....+++.|+|||++.+   .++.++|+||||
T Consensus       243 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG  280 (371)
T 3q60_A          243 KVGTRG--PASSVPVTYAPREFLNASTATFTHALNAWQLG  280 (371)
T ss_dssp             ETTCEE--EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred             ecCCCc--cCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence            654322  13456689999999874   489999999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=5.3e-26  Score=141.84  Aligned_cols=106  Identities=25%  Similarity=0.310  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH--------GVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      |||+++|+|.+++.. ..+++..+..++.|++.|+.|+|++        +++|+||+|+||+++.   ...+|++|||.+
T Consensus       114 ~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfg~a  189 (337)
T 3mdy_A          114 TDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK---NGTCCIADLGLA  189 (337)
T ss_dssp             ECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT---TSCEEECCCTTC
T ss_pred             EeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC---CCCEEEEeCCCc
Confidence            699999999999965 4699999999999999999999998        9999999999999953   446999999998


Q ss_pred             eecCCcccc-----cccccccccccccccccc-CCCc------cceeecC
Q 033837           73 VFFRPREQF-----NELVGSLYYMALEVLKRN-YGPE------VDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~~-----~~~~~~~~~~~pe~~~~~-~~~~------~d~wslg  110 (110)
                      .........     ....|++.|+|||++.+. +...      +|+||||
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  239 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFG  239 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHH
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHH
Confidence            765433221     235789999999998743 4443      8999987

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=2.3e-26  Score=146.80  Aligned_cols=107  Identities=25%  Similarity=0.365  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      ||||+++ +.+.+.    ....+++..+..++.|++.|+.|||+++++||||+|+||+++.  ....+|++|||++....
T Consensus       117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEECC
T ss_pred             eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC--CCCcEEEeeCCCccccc
Confidence            6788764 444332    3567999999999999999999999999999999999999962  33469999999998765


Q ss_pred             Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .........+++.|+|||++.+  .++.++|+||+|
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  229 (394)
T 4e7w_A          194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTG  229 (394)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHH
Confidence            5444455678999999999864  489999999987

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.93  E-value=2e-26  Score=142.64  Aligned_cols=107  Identities=26%  Similarity=0.546  Sum_probs=86.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++++++.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  157 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK---HSVIKLCDFGFARLLTGPSD  157 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECC----
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcC---CCCEEEeeCCCchhccCccc
Confidence            689999999998887888999999999999999999999999999999999999953   4469999999987765332 


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  190 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIG  190 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHH
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHH
Confidence            2334578899999999864  478999999987

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=1.7e-26  Score=144.40  Aligned_cols=107  Identities=18%  Similarity=0.249  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK------------------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV   56 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~   56 (110)
                      |||+++|+|.+++...                        ..+++.++..++.|++.|+.|||+++++|+||+|+||+++
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~  208 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG  208 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEC
Confidence            6899999999999763                        5689999999999999999999999999999999999995


Q ss_pred             eCCCCceEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           57 NKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        57 ~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .   ...++++|||.+........   .....+++.|+|||.+. ..++.++|+||||
T Consensus       209 ~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  263 (343)
T 1luf_A          209 E---NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG  263 (343)
T ss_dssp             G---GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             C---CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHH
Confidence            3   44699999998876533221   12345678899999987 4588999999987

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=1.4e-26  Score=150.00  Aligned_cols=107  Identities=21%  Similarity=0.293  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++......
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~---~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT---TCCEEECSTTGGGGBCCH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC---CCcEEEeeCCCceEcCCC
Confidence            6999999999999743  46889999999999999999999999999999999999953   446999999998765432


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.++.++|+||||
T Consensus       338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  372 (454)
T 1qcf_A          338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG  372 (454)
T ss_dssp             HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceeccCCCcccccccCHHHhccCCCCcHHHHHhHH
Confidence            21  12234567799999997 5689999999987

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.93  E-value=4.7e-26  Score=140.14  Aligned_cols=107  Identities=35%  Similarity=0.664  Sum_probs=92.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus       103 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~~~~~~~~~~  179 (298)
T 1phk_A          103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEK  179 (298)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCCTTCEECCTTCC
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcC---CCcEEEecccchhhcCCCcc
Confidence            689999999999988888999999999999999999999999999999999999954   34599999999877655444


Q ss_pred             ccccccccccccccccc-------ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-------RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-------~~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.       ..++.++|+||||
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  216 (298)
T 1phk_A          180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG  216 (298)
T ss_dssp             BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred             cccccCCccccCHHHhccccccccccCCcccccHhHH
Confidence            44567889999999874       2367899999987

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.92  E-value=4.4e-26  Score=139.64  Aligned_cols=106  Identities=26%  Similarity=0.536  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~Dfg~~~~~~~~~-  168 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY---KGELKIADFGWSVHAPSLR-  168 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT---TCCEEECCCTTCEECSSSC-
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcC---CCCEEEecccccccCcccc-
Confidence            689999999999988888999999999999999999999999999999999999954   3459999999886654322 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+ .++.++|+||||
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  199 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAG  199 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHH
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHH
Confidence            234568899999999875 488999999987

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=2.4e-26  Score=140.65  Aligned_cols=107  Identities=19%  Similarity=0.308  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.. ...+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~---~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT---TSCEEECSTTGGGGBCCHH
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcC---CCCEEEccccccccccccc
Confidence            689999999999976 467999999999999999999999999999999999999953   4459999999887654432


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+. ..++.++|+||+|
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  208 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG  208 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHH
T ss_pred             cccccCCccCcccCCHHHhccCCCCchhhHHHHH
Confidence            1  12234567899999997 4588999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.92  E-value=4.8e-26  Score=141.88  Aligned_cols=107  Identities=27%  Similarity=0.411  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCC----------------Cc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK----------------SF   62 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~----------------~~   62 (110)
                      |||+ +++|.+++...+  ++++..+..++.|++.|+.|||+++++|+||+|+||+++..+.                ..
T Consensus        96 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~  174 (339)
T 1z57_A           96 FELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP  174 (339)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCC
T ss_pred             EcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCC
Confidence            6888 789999997664  6899999999999999999999999999999999999964321                34


Q ss_pred             eEEEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           63 SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        63 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .++++|||.+......  .....+++.|+|||++.+ .++.++|+||||
T Consensus       175 ~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  221 (339)
T 1z57_A          175 DIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIG  221 (339)
T ss_dssp             CEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHH
T ss_pred             CceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHH
Confidence            5899999988764332  234578899999999975 589999999987

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=1.2e-26  Score=147.30  Aligned_cols=107  Identities=21%  Similarity=0.270  Sum_probs=88.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++.......
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~---~~~~kl~DfG~s~~~~~~~  267 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE---KNVLKISDFGMSREEADGV  267 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCGGGCEECTTSE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcC---CCcEEECcCCCceecCCCc
Confidence            6899999999999764 56999999999999999999999999999999999999953   3469999999987654322


Q ss_pred             cc---cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..   ....+++.|+|||.+. +.++.++|+||||
T Consensus       268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  302 (377)
T 3cbl_A          268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG  302 (377)
T ss_dssp             EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHH
T ss_pred             eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHH
Confidence            11   1123456799999987 4588899999987

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.92  E-value=2.7e-26  Score=139.53  Aligned_cols=107  Identities=18%  Similarity=0.283  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR---DLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT---TCCEEECCTTCEEECCTTC
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC---CCCEEEccCccceecchhh
Confidence            6899999999999765 45999999999999999999999999999999999999953   4459999999987664432


Q ss_pred             c--cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  192 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG  192 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHH
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHH
Confidence            2  122345677999999974 588999999987

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.92  E-value=2.4e-26  Score=141.67  Aligned_cols=107  Identities=20%  Similarity=0.315  Sum_probs=90.2

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.. ...+++.++..++.|++.|+.|||+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus       104 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT---EEEECCCTTCEECCTTC
T ss_pred             EEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC---CEEECcccccccccCCC
Confidence            689999999999954 46799999999999999999999999999999999999996543   59999999987765432


Q ss_pred             c----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    .....++..|+|||.+.+ .++.++|+||+|
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  216 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFG  216 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHH
Confidence            1    223456778999999874 478899999987

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=3.7e-26  Score=142.72  Aligned_cols=107  Identities=22%  Similarity=0.316  Sum_probs=84.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+|+|.+++... +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~---~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT---EEEECCTTC--------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC---CEEEccCcceeEccCcc
Confidence            5789999999999764 6799999999999999999999999999999999999996543   59999999987664332


Q ss_pred             cc---ccccccccccccccccc-cCCCccceeecC
Q 033837           80 QF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..   ....+++.|+|||.+.+ .++.++|+||||
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  206 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG  206 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHH
Confidence            21   22345678999999974 588999999987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.92  E-value=2.6e-26  Score=139.99  Aligned_cols=107  Identities=38%  Similarity=0.635  Sum_probs=83.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++...+.+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT---TSCEEECCCCGGGCCCC---
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECC---CCCEEEeecccccccCCCcc
Confidence            689999999999988888999999999999999999999999999999999999953   34599999998876654433


Q ss_pred             ccccccccccccccccccc-C-CCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRN-Y-GPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~-~-~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+. + +.++|+||||
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  198 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCG  198 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHH
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHH
Confidence            3445788899999999754 3 5789999987

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=2.8e-26  Score=139.58  Aligned_cols=107  Identities=21%  Similarity=0.347  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~  160 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---NQVIKVSDFGMTRFVLDDQ  160 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG---GGCEEECCTTGGGGBCCHH
T ss_pred             EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC---CCCEEeccccccccccccc
Confidence            6899999999999754 56999999999999999999999999999999999999953   3459999999887654332


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+. ..++.++|+||+|
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (269)
T 4hcu_A          161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG  194 (269)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccccCcccccccCCHHHhcCCCCCchhhhHHHH
Confidence            1  22345567899999997 4588999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=6e-26  Score=139.61  Aligned_cols=107  Identities=30%  Similarity=0.429  Sum_probs=91.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE---DLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcC---CCCEEEEeccCceecccCcc
Confidence            689999999999988888999999999999999999999999999999999999953   4459999999987764322 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+ .++.++|+||+|
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  202 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG  202 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHH
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHH
Confidence            2233568889999999874 478899999987

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=2e-26  Score=143.33  Aligned_cols=107  Identities=20%  Similarity=0.320  Sum_probs=82.3

Q ss_pred             CCCcCCCCHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKG------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++....      .+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+..
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~---~~~~kl~Dfg~a~~  186 (323)
T 3qup_A          110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE---DMTVCVADFGLSRK  186 (323)
T ss_dssp             EECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT---TSCEEECCCCC---
T ss_pred             EEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC---CCCEEEeecccccc
Confidence            58999999999986432      5999999999999999999999999999999999999953   44699999999876


Q ss_pred             cCCcccc---ccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQF---NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......   ....+++.|+|||.+.+ .++.++|+||||
T Consensus       187 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  226 (323)
T 3qup_A          187 IYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG  226 (323)
T ss_dssp             --------------CCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccccccccCcccccCchhhcCCCCCCccchhhHH
Confidence            5433221   22345678999999874 488999999987

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.92  E-value=2e-26  Score=146.92  Aligned_cols=105  Identities=32%  Similarity=0.560  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      || +.+++|.+++.....+++.++..++.|++.||.|||+++|+||||+|+||+++.    ..+|++|||++....... 
T Consensus       135 ~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             EE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS----SCEEECCCSSSCCC-----
T ss_pred             Ee-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC----CeEEEEecCccccccCCCc
Confidence            56 567899999998889999999999999999999999999999999999999942    359999999987764322 


Q ss_pred             --ccccccccccccccccccc------------cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR------------NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~------------~~~~~~d~wslg  110 (110)
                        ......|++.|+|||++.+            .++.++|+||||
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlG  254 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  254 (390)
T ss_dssp             ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHH
T ss_pred             cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHH
Confidence              1234578999999999853            478899999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.92  E-value=2.4e-26  Score=143.60  Aligned_cols=109  Identities=28%  Similarity=0.507  Sum_probs=86.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++ +|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||++..++  ....++++|||.+......
T Consensus       112 ~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          112 FEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             EECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             EecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            688884 9999999888899999999999999999999999999999999999996432  3346899999988765432


Q ss_pred             -cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 -EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 -~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       .......+++.|+|||++.+  .++.++|+||||
T Consensus       191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  225 (329)
T 3gbz_A          191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA  225 (329)
T ss_dssp             ---------CCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHH
Confidence             22334567899999999874  379999999987

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.92  E-value=5.6e-26  Score=146.00  Aligned_cols=107  Identities=24%  Similarity=0.347  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++ ++.+.+.    ....+++..+..++.|++.||.|||+++|+||||||+||+++.+  ...+||+|||+++.+.
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~--~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECC
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC--CCeEEeccchhhhhcc
Confidence            578875 6665553    34679999999999999999999999999999999999999643  3458999999998765


Q ss_pred             Cccccccccccccccccccccc--cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .........+++.|+|||++.+  .|+.++|+||||
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  244 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG  244 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHH
Confidence            5444445678999999999863  489999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.92  E-value=6.6e-26  Score=139.58  Aligned_cols=107  Identities=21%  Similarity=0.317  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++   ....++++|||.+.......
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSCGGGCCCSCGG
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCCCEEECcccccccccccc
Confidence            6899999999999764 5689999999999999999999999999999999999994   34469999999987664432


Q ss_pred             c-----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .     .....+++.|+|||.+.+ .++.++|+||+|
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  219 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG  219 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHH
Confidence            1     122456778999999974 588899999987

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=3.1e-26  Score=145.37  Aligned_cols=107  Identities=21%  Similarity=0.322  Sum_probs=81.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++.......
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE---KFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECCC----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECC---CCCEEEeeccccccccccc
Confidence            6899999999999765 56889999999999999999999999999999999999953   4469999999987653322


Q ss_pred             c-----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .     .....+++.|+|||.+. ..++.++|+||||
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG  283 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG  283 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHH
Confidence            1     12235567899999987 4589999999987

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=2.8e-26  Score=141.92  Aligned_cols=107  Identities=23%  Similarity=0.261  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhCCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAKGH------------------------YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV   56 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~------------------------~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~   56 (110)
                      |||+++|+|.+++.....                        +++.++..++.|++.|+.|||+++++|+||+|+||+++
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~  184 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA  184 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEc
Confidence            689999999999976433                        88999999999999999999999999999999999996


Q ss_pred             eCCCCceEEEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           57 NKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        57 ~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .   ...++++|||.+........   .....+++.|+|||.+.+ .++.++|+||||
T Consensus       185 ~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  239 (314)
T 2ivs_A          185 E---GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG  239 (314)
T ss_dssp             T---TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             C---CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHH
Confidence            4   34599999999876643322   122355678999999874 488999999987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.92  E-value=3.6e-26  Score=142.19  Aligned_cols=107  Identities=21%  Similarity=0.266  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++...    ..+++.++..++.|++.|+.|||+++++|+||+|+||+++   ....+|++|||.+....
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGISKKGT  190 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---TTCCEEECCCTTCEECS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---CCCCEEEeecccccccc
Confidence            6899999999988644    2589999999999999999999999999999999999995   34469999999987653


Q ss_pred             Cccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           77 PREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ....   .....|++.|+|||.+. +.++.++|+||||
T Consensus       191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  228 (321)
T 2qkw_B          191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG  228 (321)
T ss_dssp             SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred             cccccccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence            3211   22346789999999987 5689999999987

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=3.5e-26  Score=145.08  Aligned_cols=107  Identities=21%  Similarity=0.325  Sum_probs=80.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++.+. ..+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++.......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcC---CCCEEECcCccccccccCC
Confidence            6899999999999765 47999999999999999999999999999999999999953   4469999999987664322


Q ss_pred             cc----cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..    ....+++.|+|||.+. ..++.++|+||||
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG  237 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG  237 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHH
Confidence            11    1123456799999997 4588999999987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=4.3e-26  Score=141.94  Aligned_cols=107  Identities=17%  Similarity=0.244  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHc---CCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKH---GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      |||+++|+|.+++...    ..+++..+..++.|++.|+.|||++   +++|+||+|+||+++.   ...++++|||.+.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~---~~~~kl~Dfg~~~  182 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAK  182 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT---TCCEEECCCSSCE
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC---CCCEEeccCcccc
Confidence            6899999999999754    3499999999999999999999999   9999999999999953   4459999999987


Q ss_pred             ecCCccc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           74 FFRPREQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......  .....|++.|+|||.+. ..++.++|+||||
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  222 (326)
T 3uim_A          183 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG  222 (326)
T ss_dssp             ECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHH
T ss_pred             ccCcccccccccccCCcCccCHHHhccCCCCccccchhHH
Confidence            7643222  23345899999999987 4588999999987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.92  E-value=4.1e-26  Score=141.65  Aligned_cols=106  Identities=27%  Similarity=0.496  Sum_probs=87.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ ++.+.+... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||.+.......
T Consensus        98 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           98 FEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEETTSCC
T ss_pred             EcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECC---CCCEEEccCcCceecCCCc
Confidence            688885 888888654 56999999999999999999999999999999999999954   3459999999988764322


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||++.+  .++.++|+||+|
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  207 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG  207 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHH
Confidence             2334577899999999864  489999999987

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=1e-25  Score=151.08  Aligned_cols=110  Identities=28%  Similarity=0.493  Sum_probs=95.6

Q ss_pred             CCCcCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||++|+|.+++....   .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+.....
T Consensus        97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A           97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence            68999999999997643   689999999999999999999999999999999999998766666789999999887655


Q ss_pred             cccccccccccccccccccc-ccCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ........+++.|+|||.+. ..++.++|+||+|
T Consensus       177 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLG  210 (676)
T 3qa8_A          177 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG  210 (676)
T ss_dssp             CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHH
T ss_pred             ccccccccCCcccCChHHhccCCCCchhHHHHHH
Confidence            44445567899999999997 4589999999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.92  E-value=6.4e-26  Score=138.47  Aligned_cols=107  Identities=28%  Similarity=0.558  Sum_probs=73.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR---NMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECT---TCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCCEEEEeecceeeccCCC
Confidence            6899999999999865 67999999999999999999999999999999999999953   4459999999887654322


Q ss_pred             -ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+ .++.++|+||||
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  199 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLG  199 (278)
T ss_dssp             -------------------------CTHHHHHH
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHH
Confidence             2233568899999999874 478899999987

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=9.2e-26  Score=140.33  Aligned_cols=106  Identities=25%  Similarity=0.447  Sum_probs=88.0

Q ss_pred             CCCcCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||++ |+|.+++...      ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||.+..
T Consensus        82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A           82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK---RGQLKLGDFGLARA  157 (317)
T ss_dssp             EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCSSCEE
T ss_pred             EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC---CCCEEECcCcccee
Confidence            68898 5999988643      35899999999999999999999999999999999999954   34599999999877


Q ss_pred             cCCcc-ccccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPRE-QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ..... ......+++.|+|||++.+  .++.++|+||||
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  196 (317)
T 2pmi_A          158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCG  196 (317)
T ss_dssp             TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHH
Confidence            64322 2334578899999999874  489999999987

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=8.2e-26  Score=140.08  Aligned_cols=107  Identities=25%  Similarity=0.428  Sum_probs=82.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++...+.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA---DDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECSCCC---------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcC---CCCEEEecCccCcccccccc
Confidence            689999999999988888999999999999999999999999999999999999954   3459999999886654322 


Q ss_pred             -ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+ .++.++|+||||
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  222 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALT  222 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHH
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHH
Confidence             1233568889999999874 588899999987

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.92  E-value=8.3e-26  Score=140.79  Aligned_cols=105  Identities=26%  Similarity=0.528  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.   .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++  ..++++|||.+........
T Consensus       112 ~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~--~~~kl~Dfg~a~~~~~~~~  186 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQE  186 (330)
T ss_dssp             EECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCCTTCEECCTTCC
T ss_pred             EeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC--CEEEEEeCCCceEcCCCCc
Confidence            68999999998874   388999999999999999999999999999999999996432  3699999999987655444


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+  .++.++|+||||
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  218 (330)
T 3nsz_A          187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLG  218 (330)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             cccccccccccChhhhcCCCcCCchhhHHHHH
Confidence            455678899999999874  489999999987

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.92  E-value=3e-26  Score=142.82  Aligned_cols=107  Identities=21%  Similarity=0.308  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++.. ...+++.++..++.|++.|+.|||+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA---HVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT---EEEECCGGGCEECCTTC
T ss_pred             EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCC---CEEEcccccceecccCC
Confidence            689999999999976 46799999999999999999999999999999999999996543   59999999988764332


Q ss_pred             c----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    .....+++.|+|||.+.+ .++.++|+||||
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  217 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG  217 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHH
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHH
Confidence            1    122456778999999874 478899999987

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.92  E-value=4.2e-26  Score=149.15  Aligned_cols=107  Identities=20%  Similarity=0.284  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++.+.  ..+++..+..++.|++.|+.|||+++++||||+|+||+++   ....+||+|||++......
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~  371 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGD  371 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEECCTTC
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeecccceeccCC
Confidence            6899999999999764  4589999999999999999999999999999999999994   3456999999998776432


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.++.++|+||||
T Consensus       372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG  406 (495)
T 1opk_A          372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG  406 (495)
T ss_dssp             CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHH
Confidence            21  12234567899999987 4588999999987

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.92  E-value=3.5e-26  Score=143.52  Aligned_cols=105  Identities=32%  Similarity=0.566  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      || +.+++|.+++.....+++.++..++.|++.|+.|||+++++||||+|+||+++.    ..+|++|||++........
T Consensus        88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~----~~~kl~DFG~a~~~~~~~~  162 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT  162 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCCC-----
T ss_pred             Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC----CcEEEeecccccccCcccc
Confidence            56 457899999998889999999999999999999999999999999999999952    3599999999877643322


Q ss_pred             ---ccccccccccccccccc------------ccCCCccceeecC
Q 033837           81 ---FNELVGSLYYMALEVLK------------RNYGPEVDVWSML  110 (110)
Q Consensus        81 ---~~~~~~~~~~~~pe~~~------------~~~~~~~d~wslg  110 (110)
                         .....|++.|+|||++.            ..++.++|+||||
T Consensus       163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG  207 (343)
T 3dbq_A          163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  207 (343)
T ss_dssp             -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHH
T ss_pred             cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHH
Confidence               23457899999999985            3477899999987

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=5.1e-26  Score=140.72  Aligned_cols=107  Identities=21%  Similarity=0.263  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCc
Q 033837            1 MKLCEEGELVDRIVAKG------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF   62 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~   62 (110)
                      |||+++|+|.+++....                  .+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ..
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~  182 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GR  182 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET---TT
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC---CC
Confidence            68999999999997643                  4899999999999999999999999999999999999954   34


Q ss_pred             eEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           63 SLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        63 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .++++|||.+........   .....+++.|+|||.+. ..++.++|+||||
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  234 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG  234 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHH
Confidence            699999999876644322   12345677899999887 4588999999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.92  E-value=8.4e-26  Score=143.44  Aligned_cols=107  Identities=21%  Similarity=0.435  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCC------------------
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKK------------------   59 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~------------------   59 (110)
                      |||+ ++++.+.+...  +.+++..+..++.|++.||.|||++ +++||||||+||+++.++                  
T Consensus       124 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~  202 (397)
T 1wak_A          124 FEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA  202 (397)
T ss_dssp             ECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC-------
T ss_pred             Eecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCC
Confidence            6888 56777777554  5699999999999999999999998 999999999999996432                  


Q ss_pred             ----------------------------CCceEEEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           60 ----------------------------KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        60 ----------------------------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                                                  ....++++|||.+......  .....||+.|+|||++.+ .++.++|+||||
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  280 (397)
T 1wak_A          203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSGYNTPADIWSTA  280 (397)
T ss_dssp             --------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHH
T ss_pred             CCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhcCCCCCcHHHHHHHH
Confidence                                        1126999999998765432  234578999999999975 489999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.92  E-value=1.3e-25  Score=138.78  Aligned_cols=107  Identities=24%  Similarity=0.393  Sum_probs=90.2

Q ss_pred             CCCcCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVA---KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++++|.+++..   ...+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE---AFTAKISDFGLARASEK  185 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCEEECCCTTCEECCS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC---CCcEEEeeccccccccc
Confidence            689999999999863   356999999999999999999999999999999999999953   44699999998876543


Q ss_pred             ccc---cccccccccccccccccccCCCccceeecC
Q 033837           78 REQ---FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~---~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                      ...   .....|++.|+|||.+.+.++.++|+||||
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG  221 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFG  221 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHH
T ss_pred             ccccccccccCCCcCcCChHHhcCCCCccchhHHHH
Confidence            221   223468899999999887788999999987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.92  E-value=3.1e-26  Score=141.85  Aligned_cols=107  Identities=23%  Similarity=0.317  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhCCC----------------CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKGH----------------YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~----------------~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++.....                +++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~---~~~~  187 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNVV  187 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCE
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC---CCCE
Confidence            689999999999976543                889999999999999999999999999999999999953   4459


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +++|||.+........   .....+++.|+|||.+. ..++.++|+||||
T Consensus       188 kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  237 (316)
T 2xir_A          188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  237 (316)
T ss_dssp             EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             EECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHH
Confidence            9999999876543221   22346678899999987 4588999999987

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.92  E-value=1.2e-25  Score=144.79  Aligned_cols=106  Identities=27%  Similarity=0.491  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. ++|.+++...  ..+++..+..++.|++.|+.|||+++++||||+|+||+++.++ ...+|++|||++......
T Consensus       178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-~~~vkL~DFG~a~~~~~~  255 (429)
T 3kvw_A          178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-RSGIKVIDFGSSCYEHQR  255 (429)
T ss_dssp             ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-SCCEEECCCTTCEETTCC
T ss_pred             EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-CcceEEeecccceecCCc
Confidence            58886 5999988765  3599999999999999999999999999999999999996432 123899999998664332


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        .....+++.|+|||++.+ .++.++|+||||
T Consensus       256 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  286 (429)
T 3kvw_A          256 --VYTYIQSRFYRAPEVILGARYGMPIDMWSLG  286 (429)
T ss_dssp             --CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHH
T ss_pred             --ccccCCCCCccChHHHhCCCCCchHHHHhHH
Confidence              234578999999999874 589999999987

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.92  E-value=4.3e-26  Score=147.66  Aligned_cols=107  Identities=20%  Similarity=0.244  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++..  +..+++.++..++.|++.|+.|||+++++||||+|+||+++   ....+|++|||++......
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC-----
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceecCCC
Confidence            699999999999964  35699999999999999999999999999999999999994   3456999999998765432


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.++.++|+||||
T Consensus       334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG  368 (452)
T 1fmk_A          334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  368 (452)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceecccCCcccccccCHhHHhcCCCCccccHHhHH
Confidence            21  12234567899999987 5689999999987

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=4.6e-26  Score=152.09  Aligned_cols=107  Identities=23%  Similarity=0.387  Sum_probs=86.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++..+..++.|++.|+.|||+++++||||+|+||+++.+   ..+||+|||++.......
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~---~~vkL~DFGla~~~~~~~  490 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR---HYAKISDFGLSKALGADD  490 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCSTTTTCC---
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCC---CcEEEeeccCcccccCCC
Confidence            6999999999999754 569999999999999999999999999999999999999654   359999999987654322


Q ss_pred             cc----cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..    ....+++.|+|||++. +.++.++|+||||
T Consensus       491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlG  526 (613)
T 2ozo_A          491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG  526 (613)
T ss_dssp             -----------CCTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHH
Confidence            11    1123457899999997 5689999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.92  E-value=6.3e-26  Score=142.54  Aligned_cols=106  Identities=25%  Similarity=0.510  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      ||||++ ++.+.+... ..+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+...... 
T Consensus       103 ~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~a~~~~~~~  178 (351)
T 3mi9_A          103 FDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARAFSLAK  178 (351)
T ss_dssp             EECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECCCCS
T ss_pred             EeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCCEEEccchhcccccccc
Confidence            588875 777777654 67999999999999999999999999999999999999954   345999999998765421 


Q ss_pred             ----cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 ----EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 ----~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                          .......+++.|+|||++.+  .++.++|+||||
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  216 (351)
T 3mi9_A          179 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  216 (351)
T ss_dssp             SSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             cccccccCCcccccCccCchhhcCCCCCCcHhHHHHHH
Confidence                11233567899999998864  379999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.92  E-value=4.5e-26  Score=140.46  Aligned_cols=106  Identities=25%  Similarity=0.448  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.++. ....+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++....... 
T Consensus       117 ~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  192 (298)
T 2zv2_A          117 FELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE---DGHIKIADFGVSNEFKGSDA  192 (298)
T ss_dssp             EECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TSCEEECCCTTCEECSSSSC
T ss_pred             EecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC---CCCEEEecCCCccccccccc
Confidence            6899999988754 4467999999999999999999999999999999999999954   3459999999987765432 


Q ss_pred             cccccccccccccccccccc----CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKRN----YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~~----~~~~~d~wslg  110 (110)
                      ......|++.|+|||.+.+.    ++.++|+||||
T Consensus       193 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  227 (298)
T 2zv2_A          193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG  227 (298)
T ss_dssp             EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHH
T ss_pred             cccCCcCCccccChhhhccCCCCCCCchhhhHhHH
Confidence            23345789999999998743    36789999987

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.4e-25  Score=142.06  Aligned_cols=103  Identities=24%  Similarity=0.400  Sum_probs=87.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +++|.+++.. ..+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++......  
T Consensus       109 ~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~--  181 (367)
T 1cm8_A          109 MPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLARQADSE--  181 (367)
T ss_dssp             EECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECCSS--
T ss_pred             EecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcC---CCCEEEEeeecccccccc--
Confidence            5778 6799988865 67999999999999999999999999999999999999954   345999999998765432  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||++.+  .++.++|+||+|
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  213 (367)
T 1cm8_A          182 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG  213 (367)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred             cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence            234577999999999864  489999999987

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=1.9e-25  Score=138.95  Aligned_cols=106  Identities=27%  Similarity=0.448  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+. |+|.+++...  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        98 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~---~~~~kl~Dfg~~~~~~~~  173 (326)
T 1blx_A           98 FEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQ  173 (326)
T ss_dssp             EECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECSCCSCCCCCGG
T ss_pred             EecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcC---CCCEEEecCcccccccCC
Confidence            57887 5999999765  34999999999999999999999999999999999999954   345999999998766544


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+. ..++.++|+||||
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  206 (326)
T 1blx_A          174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG  206 (326)
T ss_dssp             GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred             CCccccccccceeCHHHHhcCCCCcchhHHHHH
Confidence            3344567889999999987 4589999999987

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.92  E-value=3.8e-26  Score=143.93  Aligned_cols=106  Identities=27%  Similarity=0.442  Sum_probs=89.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++...+.+++..+..++.+++.|+.|||+. +++|+||+|+||+++.   ...++++|||.+...... 
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~-  185 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDS-  185 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT---TCCEEECCCCCCHHHHHH-
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECC---CCCEEEEECCCCcccccc-
Confidence            69999999999998888899999999999999999999996 9999999999999954   345999999987654322 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .++.++|+||||
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  217 (360)
T 3eqc_A          186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG  217 (360)
T ss_dssp             C----CCCCTTCCHHHHTTCCCSHHHHHHHHH
T ss_pred             cccCCCCCCCeECHHHHcCCCCCchhhHHHHH
Confidence            1234578899999999874 588999999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=8.1e-26  Score=138.28  Aligned_cols=107  Identities=21%  Similarity=0.305  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT---EEEECCCCGGGCC----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC---cEEeCccCCCccccccc
Confidence            6899999999999764 5699999999999999999999999999999999999997543   59999999887654332


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+. ..++.++|+||||
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  201 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFA  201 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHH
Confidence            2  12234577899999987 4588899999987

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.5e-25  Score=137.78  Aligned_cols=107  Identities=22%  Similarity=0.328  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+|+|.+++.. ...+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~---~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE---SFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT---TCCEEECCTTSSCTTTTGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC---CCcEEeCcCCCcccccCCc
Confidence            689999999999976 467899999999999999999999999999999999999953   4469999999987654322


Q ss_pred             c-----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .     .....+++.|++||.+.+ .++.++|+||||
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  215 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFG  215 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHH
Confidence            1     123456778999999975 588899999987

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=6.7e-26  Score=139.17  Aligned_cols=106  Identities=25%  Similarity=0.483  Sum_probs=85.2

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ +|.+++... +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||.+.......
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPV  154 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECCTTHHHHHCC--
T ss_pred             EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCCEEEeECccccccCccc
Confidence            578875 899988764 67999999999999999999999999999999999999954   4459999999887654322


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  188 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG  188 (288)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             cccccccccccccCchheeCCCCCCcHHHHHHHH
Confidence             2234567899999999864  489999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.92  E-value=5.5e-26  Score=139.67  Aligned_cols=107  Identities=22%  Similarity=0.392  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++   .++++|||.+........
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT---EEEECCCTTCEECCTTCS
T ss_pred             EEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC---cEEEccCCcceeeccCCC
Confidence            68999999999999888899999999999999999999999999999999999997543   599999999877643322


Q ss_pred             c----ccccccccccccccccc-cCCCccceeecC
Q 033837           81 F----NELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~----~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    ....+++.|+|||.+.+ .++.++|+||||
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  207 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG  207 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             cccccccCCCCceeeChHHhccCCCChhhhHHHHH
Confidence            1    11245678999999874 478899999987

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.92  E-value=1.1e-25  Score=142.55  Aligned_cols=104  Identities=27%  Similarity=0.436  Sum_probs=77.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+ +|.+.+.  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++........
T Consensus       109 ~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~a~~~~~~~~  182 (371)
T 2xrw_A          109 MELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  182 (371)
T ss_dssp             EECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECCCCC---------
T ss_pred             EEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC---CCCEEEEEeecccccccccc
Confidence            578874 7888775  45899999999999999999999999999999999999953   34599999999876654433


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+++.|+|||++.+ .++.++|+||+|
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  213 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  213 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHH
Confidence            345678999999999974 589999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=1.2e-25  Score=140.58  Aligned_cols=107  Identities=21%  Similarity=0.283  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAKG----------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      |||+++|+|.+++....                .+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~  196 (334)
T 2pvf_A          120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE---NNVM  196 (334)
T ss_dssp             EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCE
T ss_pred             EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC---CCCE
Confidence            68999999999997543                3889999999999999999999999999999999999953   4459


Q ss_pred             EEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      |++|||.+........   .....+++.|+|||.+.+ .++.++|+||||
T Consensus       197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  246 (334)
T 2pvf_A          197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  246 (334)
T ss_dssp             EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHH
Confidence            9999999877644322   122345678999999874 588899999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.92  E-value=1.8e-25  Score=140.13  Aligned_cols=107  Identities=24%  Similarity=0.418  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC----------------CCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK----------------KKSF   62 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~----------------~~~~   62 (110)
                      |||+ ++++.+.+...  ..+++.++..++.|++.|+.|||+++++|+||+|+||++...                ....
T Consensus       101 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~  179 (355)
T 2eu9_A          101 FELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT  179 (355)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCC
T ss_pred             Eecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCC
Confidence            6888 56788877654  479999999999999999999999999999999999999432                1234


Q ss_pred             eEEEeecccceecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           63 SLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        63 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .++++|||.+......  .....|++.|+|||++.+ .++.++|+||||
T Consensus       180 ~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  226 (355)
T 2eu9_A          180 SIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIG  226 (355)
T ss_dssp             CEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHH
Confidence            6999999998764332  234578999999999974 589999999987

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=9.7e-26  Score=139.71  Aligned_cols=107  Identities=19%  Similarity=0.298  Sum_probs=83.1

Q ss_pred             CCCcCCCCHHHHHH------hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIV------AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~------~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++.      ....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+..
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~---~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD---DMTVCVADFGLSKK  196 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECT---TSCEEECSCSCC--
T ss_pred             EecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC---CCcEEEeecCccee
Confidence            58999999999984      2356999999999999999999999999999999999999953   34599999998876


Q ss_pred             cCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......   .....+++.|+|||.+.+ .++.++|+||||
T Consensus       197 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  236 (313)
T 3brb_A          197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG  236 (313)
T ss_dssp             --------------CCGGGSCHHHHHSSCCCHHHHHHHHH
T ss_pred             cccccccCcccccCCCccccCchhhcCCCccchhhhHHHH
Confidence            543321   122345678999999974 488999999987

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=4.8e-26  Score=139.88  Aligned_cols=107  Identities=24%  Similarity=0.430  Sum_probs=80.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.+   ..++++|||.+...... 
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A           98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED---NTVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC---------
T ss_pred             EEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC---CCEEEccceecccccccc
Confidence            6899999999999644 679999999999999999999999999999999999999643   46999999988755321 


Q ss_pred             --ccccccccccccccccccc----ccCCCccceeecC
Q 033837           79 --EQFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        79 --~~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        .......|++.|+|||.+.    ..++.++|+||||
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  212 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG  212 (289)
T ss_dssp             ---------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred             ccccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence              1223356899999999885    2377799999987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.92  E-value=1.8e-25  Score=137.52  Aligned_cols=107  Identities=29%  Similarity=0.516  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+...... 
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~  170 (303)
T 1zy4_A           94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE---SRNVKIGDFGLAKNVHRSL  170 (303)
T ss_dssp             EECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECCCCCCSCTTC--
T ss_pred             EecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC---CCCEEEeeCcchhhccccc
Confidence            6899999999999755 46888999999999999999999999999999999999953   345999999988765321 


Q ss_pred             --------------cccccccccccccccccccc--cCCCccceeecC
Q 033837           79 --------------EQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        79 --------------~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                                    .......+++.|+|||.+.+  .++.++|+||||
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  218 (303)
T 1zy4_A          171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLG  218 (303)
T ss_dssp             -----------------------CTTSCHHHHTSCSCCCTHHHHHHHH
T ss_pred             chhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHH
Confidence                          11223467889999999873  488999999987

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=5.4e-26  Score=141.69  Aligned_cols=110  Identities=17%  Similarity=0.177  Sum_probs=90.2

Q ss_pred             CCCcCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAK-------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~   73 (110)
                      |||+++++|.+++...       ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++....++++|||.+.
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            6899999999999765       348899999999999999999999999999999999999755555579999999886


Q ss_pred             ecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           74 FFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        74 ~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .......   .....+++.|+|||.+. ..++.++|+||||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  232 (327)
T 2yfx_A          192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG  232 (327)
T ss_dssp             HHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHH
Confidence            5432221   12345678899999987 4588999999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.92  E-value=1.2e-25  Score=140.43  Aligned_cols=107  Identities=26%  Similarity=0.478  Sum_probs=86.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++++++.++......+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus       103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ---SGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCCTTC--------
T ss_pred             EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcC---CCcEEEEeCCCceeecCCcc
Confidence            689998888888777788999999999999999999999999999999999999953   3469999999987654322 


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+  .++.++|+||+|
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG  212 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIG  212 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHH
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHH
Confidence            2334578899999999874  478899999987

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.91  E-value=1.1e-25  Score=137.93  Aligned_cols=107  Identities=21%  Similarity=0.291  Sum_probs=89.5

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECG---GGCEEECCCCGGGTSCSS
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcC---CCCEEEccCccceeccCC
Confidence            6899999999999864  45999999999999999999999999999999999999953   445999999988765433


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. ..++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  199 (288)
T 3kfa_A          165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG  199 (288)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccCCccccCcCChhhhccCCCCchhhHHHHH
Confidence            22  22345677899999997 4588999999987

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.91  E-value=2e-25  Score=138.69  Aligned_cols=107  Identities=20%  Similarity=0.271  Sum_probs=88.1

Q ss_pred             CCCcCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK----------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      |||+++|+|.+++...          ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~---~~~~kl~Dfg  183 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFG  183 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT---TCCEEECCTT
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC---CCeEEECcCc
Confidence            6899999999998642          45789999999999999999999999999999999999954   3459999999


Q ss_pred             cceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           71 LSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .+........   .....+++.|+|||.+. ..++.++|+||||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  227 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  227 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence            8876533221   12235678899999987 4588999999987

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.91  E-value=1.7e-25  Score=150.23  Aligned_cols=107  Identities=21%  Similarity=0.324  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... ..+++..+..++.|++.|+.|||+++++||||+|+||+++.+   ..+|++|||++.......
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~---~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCCCCSCCC--
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC---CCEEEEecCCCeecCCCc
Confidence            6899999999999765 479999999999999999999999999999999999999754   359999999987764432


Q ss_pred             cc--cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF--NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~--~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  ....+++.|+|||.+. ..++.++|+||||
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG  579 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFG  579 (656)
T ss_dssp             --------CCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHH
Confidence            21  1234567899999987 4588999999987

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.91  E-value=2e-25  Score=139.16  Aligned_cols=106  Identities=21%  Similarity=0.406  Sum_probs=83.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++ |+|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~a~~~~~~~  154 (324)
T 3mtl_A           79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE---RGELKLADFGLARAKSIPT  154 (324)
T ss_dssp             EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECT---TCCEEECSSSEEECC----
T ss_pred             ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECC---CCCEEEccCcccccccCCc
Confidence            68887 5899988765 56999999999999999999999999999999999999954   3459999999887654322


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||++.+  .++.++|+||+|
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  188 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVG  188 (324)
T ss_dssp             --------CGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             cccccccCcccccChhhhcCCCCCCcHHHHHHHH
Confidence             2234577899999999864  478999999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=1.4e-25  Score=139.56  Aligned_cols=106  Identities=24%  Similarity=0.296  Sum_probs=88.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++|+|.+++... .+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus       114 ~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~---~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             ECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCGGGCEECCTTCS
T ss_pred             EecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcC---CCCEEECCcccccccccccc
Confidence            6899999999998654 4999999999999999999999999999999999999953   44599999999887654322


Q ss_pred             ----cccccccccccccccccc-cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                          .....+++.|+|||.+.+ .++.++|+||||
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  224 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG  224 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHH
Confidence                122456778999999974 578899999987

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=2.6e-25  Score=136.27  Aligned_cols=108  Identities=24%  Similarity=0.375  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCC--CCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+.+.+. ..+++..+..++.|++.|+.|||+++  ++|+||+|+||+++.++  ....++++|||.+...
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~  179 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS  179 (287)
T ss_dssp             EECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred             EEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence            6899999999988754 57999999999999999999999999  99999999999996433  1234899999988654


Q ss_pred             CCcccccccccccccccccccc---ccCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVLK---RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~d~wslg  110 (110)
                      ...  .....+++.|+|||.+.   ..++.++|+||+|
T Consensus       180 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG  215 (287)
T 4f0f_A          180 VHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFA  215 (287)
T ss_dssp             SSC--EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHH
T ss_pred             ccc--ccccCCCccccCchhhccCCCCcCchhhHHHHH
Confidence            332  23457889999999984   2378899999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=2.3e-25  Score=135.19  Aligned_cols=107  Identities=21%  Similarity=0.340  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++..+..++.|++.|+.++|+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---NQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG---GGCEEECCTTGGGGBCCHH
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC---CCCEEEccccccccccccc
Confidence            6899999999999765 67999999999999999999999999999999999999953   4459999999887654322


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+. ..++.++|+||+|
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  192 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG  192 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhH
Confidence            1  12245567899999997 4588899999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.91  E-value=4.3e-25  Score=136.79  Aligned_cols=107  Identities=25%  Similarity=0.436  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++. ....+++..+..++.|++.|+.|||+.+++|+||+|+||+++.   ...++++|||.+.......
T Consensus       103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT---EGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECBTTB
T ss_pred             eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECC---CCCEEEeecccchhhhhhc
Confidence            68999999999986 4578999999999999999999999999999999999999954   3459999999987664432


Q ss_pred             -ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+ .++.++|+||||
T Consensus       180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (314)
T 3com_A          180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLG  212 (314)
T ss_dssp             SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHH
T ss_pred             cccCccCCCCCccChhhcCCCCCCccccHHHHH
Confidence             2234568889999999874 488999999987

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=9.2e-26  Score=140.82  Aligned_cols=107  Identities=21%  Similarity=0.278  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAK--------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA   66 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l   66 (110)
                      |||+++|+|.+++...              ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+++
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl  205 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKI  205 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG---GGEEEB
T ss_pred             EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC---CCeEEE
Confidence            6899999999998642              35799999999999999999999999999999999999954   346999


Q ss_pred             eecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           67 IDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        67 ~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +|||++........   .....+++.|+|||.+. ..++.++|+||||
T Consensus       206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  253 (333)
T 2i1m_A          206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG  253 (333)
T ss_dssp             CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence            99999876533221   12245677899999987 4588999999987

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.91  E-value=8.9e-26  Score=148.75  Aligned_cols=107  Identities=20%  Similarity=0.244  Sum_probs=89.0

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++..  ...+++.++..++.|++.||.|||+++++||||+|+||+++   ....+||+|||++......
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~  416 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDN  416 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTCCCH
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceecCCC
Confidence            799999999999964  35699999999999999999999999999999999999994   3456999999998765432


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....++..|+|||.+. +.++.++|+||||
T Consensus       417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG  451 (535)
T 2h8h_A          417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  451 (535)
T ss_dssp             HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceecccCCcCcccccCHHHhccCCCCchhhHHHHH
Confidence            21  12234567899999987 5689999999987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.91  E-value=1.6e-25  Score=136.21  Aligned_cols=108  Identities=24%  Similarity=0.373  Sum_probs=83.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC---CeecCCCCCceEEEeCC-----CCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG---VMHHDLNPKKILFVNKK-----KSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~~l~~~~il~~~~~-----~~~~~~l~d~g~~   72 (110)
                      |||+++++|.+++. ...+++..+..++.|++.|+.|||+++   ++|+||+|+||+++...     ....++++|||.+
T Consensus        85 ~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           85 MEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             EECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             EEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence            68999999998874 568999999999999999999999999   89999999999996422     1456999999988


Q ss_pred             eecCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           73 VFFRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ........ ....+++.|+|||.+.+ .++.++|+||||
T Consensus       164 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  201 (271)
T 3dtc_A          164 REWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYG  201 (271)
T ss_dssp             -------------CCGGGSCHHHHHHCCCSHHHHHHHHH
T ss_pred             cccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHH
Confidence            76543322 23467899999999874 488899999987

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.8e-25  Score=138.49  Aligned_cols=107  Identities=21%  Similarity=0.310  Sum_probs=89.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.+||+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~---~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT---EEEECCCTTCEECCSSC
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC---cEEEecCcchhhccccc
Confidence            6899999999999875 5699999999999999999999999999999999999996543   59999999987764432


Q ss_pred             c----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    .....++..|+|||.+.+ .++.++|+||||
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  235 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFG  235 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHH
Confidence            2    112345667999999874 478899999987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.91  E-value=4.3e-25  Score=139.39  Aligned_cols=107  Identities=19%  Similarity=0.363  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCC---CCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKK---KSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~---~~~~~~l~d~g~~~~   74 (110)
                      |||+ +++|.+++...  ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++..+   ....++++|||.+..
T Consensus       109 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~  187 (373)
T 1q8y_A          109 FEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW  187 (373)
T ss_dssp             ECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred             EecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccc
Confidence            5788 78999999763  5699999999999999999999998 999999999999996432   334689999999876


Q ss_pred             cCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....  .....+++.|+|||++.+ .++.++|+||||
T Consensus       188 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  222 (373)
T 1q8y_A          188 YDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTA  222 (373)
T ss_dssp             TTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHH
T ss_pred             cCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHH
Confidence            5432  233478899999999975 489999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.91  E-value=3.4e-25  Score=137.84  Aligned_cols=107  Identities=28%  Similarity=0.533  Sum_probs=84.0

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++...  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~  182 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE---NAEVKLVDFGVSAQLDRT  182 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT---TCCEEECCCTTTC-----
T ss_pred             EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC---CCCEEEeeCcCceecCcC
Confidence            6899999999999764  57999999999999999999999999999999999999953   345999999988765432


Q ss_pred             c-cccccccccccccccccc------ccCCCccceeecC
Q 033837           79 E-QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~-~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      . ......+++.|+|||.+.      ..++.++|+||||
T Consensus       183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  221 (326)
T 2x7f_A          183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  221 (326)
T ss_dssp             --------CCGGGCCHHHHC--------CCTTHHHHHHH
T ss_pred             ccccccccCCccccChhhhccccccCcCCCccchHHHHH
Confidence            2 223356889999999985      2378899999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.2e-25  Score=139.48  Aligned_cols=107  Identities=22%  Similarity=0.343  Sum_probs=83.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|+|.+++... +.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus       125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECCCCC--------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECC---CCcEEECCCCcchhhcccc
Confidence            6899999999999765 67999999999999999999999999999999999999953   4469999999887654322


Q ss_pred             c----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    .....+++.|+|||.+. ..++.++|+||||
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  237 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG  237 (333)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             ccccccCCCCccccccCchhcccCCCCchhhhHHHH
Confidence            1    11224467899999987 4588899999987

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.91  E-value=3.2e-25  Score=139.53  Aligned_cols=107  Identities=23%  Similarity=0.346  Sum_probs=87.3

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHH--HcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCH--KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++ ++.+.+.    ....+++..+..++.|++.|+.|+|  +++++|+||+|+||+++..  ...++++|||++..
T Consensus       105 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~--~~~~kl~Dfg~a~~  181 (360)
T 3e3p_A          105 MEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKK  181 (360)
T ss_dssp             EECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT--TTEEEECCCTTCBC
T ss_pred             eecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC--CCcEEEeeCCCcee
Confidence            688886 5544443    4567999999999999999999999  9999999999999999631  34699999999987


Q ss_pred             cCCccccccccccccccccccccc--cCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ...........+++.|+|||++.+  .++.++|+||||
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  219 (360)
T 3e3p_A          182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVG  219 (360)
T ss_dssp             CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHH
Confidence            655444445678999999999863  389999999987

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.91  E-value=1.2e-25  Score=143.70  Aligned_cols=109  Identities=22%  Similarity=0.428  Sum_probs=81.7

Q ss_pred             CCCcCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeC-CCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK---------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-KKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~-~~~~~~~l~d~g   70 (110)
                      |||+.+ +|.+.+...         ..+++..+..++.|++.|+.|||+++|+||||+|+||++... +....+||+|||
T Consensus        99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A           99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            578864 888877521         249999999999999999999999999999999999999543 344579999999


Q ss_pred             cceecCCcc----ccccccccccccccccccc--cCCCccceeecC
Q 033837           71 LSVFFRPRE----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ++.......    ......||+.|+|||++.+  .++.++|+||||
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG  223 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  223 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHH
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHH
Confidence            987654321    1234578999999999874  388999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1e-25  Score=151.80  Aligned_cols=101  Identities=21%  Similarity=0.282  Sum_probs=85.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++++|.+.+..  .+++.++..++.|++.|+.|+|+++|+||||||+||+++.+    .+|++|||++......  
T Consensus       163 ~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~----~~kl~DFG~a~~~~~~--  234 (681)
T 2pzi_A          163 MEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE----QLKLIDLGAVSRINSF--  234 (681)
T ss_dssp             EECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS----CEEECCCTTCEETTCC--
T ss_pred             EEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC----cEEEEecccchhcccC--
Confidence            689999999987654  79999999999999999999999999999999999999542    5899999998765443  


Q ss_pred             cccccccccccccccccccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                       ....||+.|++||++.+.++.++|+||||
T Consensus       235 -~~~~gt~~y~aPE~~~~~~~~~sDi~slG  263 (681)
T 2pzi_A          235 -GYLYGTPGFQAPEIVRTGPTVATDIYTVG  263 (681)
T ss_dssp             -SCCCCCTTTSCTTHHHHCSCHHHHHHHHH
T ss_pred             -CccCCCccccCHHHHcCCCCCceehhhhH
Confidence             34568999999999886678899999987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.91  E-value=5.3e-25  Score=136.38  Aligned_cols=106  Identities=29%  Similarity=0.394  Sum_probs=83.2

Q ss_pred             CCCcCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHH---cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVAKG---HYTERVAAAVMKTIVEVVQVCHK---HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++|+|.+++....   .++...+..++.|++.|+.|||+   ++++|+||+|+||+++.++  ..+|++|||.+..
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~--~~~kl~Dfg~~~~  155 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG--TVLKICDFGTACD  155 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT--TEEEECCCCC---
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC--CEEEEcccccccc
Confidence            68999999999997654   47889999999999999999999   8999999999999996433  3479999998865


Q ss_pred             cCCccccccccccccccccccccc-cCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....  .....|++.|+|||.+.+ .++.++|+||||
T Consensus       156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  190 (307)
T 2eva_A          156 IQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG  190 (307)
T ss_dssp             -----------CCTTSSCHHHHTCCCCCTHHHHHHHH
T ss_pred             cccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHH
Confidence            4332  123468899999999975 589999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.91  E-value=1.3e-25  Score=137.22  Aligned_cols=107  Identities=24%  Similarity=0.318  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++...  ..+++..+..++.|++.|+.+||+++++|+||+|+||+++   ....++++|||.+......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECSSS
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCcccccccCc
Confidence            6899999999998643  3799999999999999999999999999999999999995   3445999999998776443


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  197 (279)
T 1qpc_A          163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG  197 (279)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHH
T ss_pred             ccccccCCCCccCccChhhhccCCCCchhhhHHHH
Confidence            22  12234567899999997 4588899999987

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.2e-25  Score=136.80  Aligned_cols=107  Identities=24%  Similarity=0.394  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... ..+++..+..++.|++.|+.+||+++++|+||+|+||+++.+   ..++++|||.+.......
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~  164 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADD  164 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC---CCEEECcccceeeeccCc
Confidence            6899999999998654 569999999999999999999999999999999999999754   359999999987764332


Q ss_pred             cc----cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..    ....+++.|+|||.+. ..++.++|+||||
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  200 (287)
T 1u59_A          165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG  200 (287)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             ceeeccccccccccccCHHHhccCCCCchhhHHHHH
Confidence            21    1234578899999997 4588899999987

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.91  E-value=4.9e-25  Score=136.02  Aligned_cols=106  Identities=25%  Similarity=0.489  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.. +.+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        99 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A           99 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             EECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECBTTBC
T ss_pred             EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECC---CCCEEEeecccceecCcccc
Confidence            689999999998854 67999999999999999999999999999999999999953   3459999999987764432 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||.+.+ .++.++|+||||
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  206 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG  206 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             ccCccCCCcCccCHHHHhcCCCCchhhhHHHH
Confidence            2234568889999999974 588899999987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.91  E-value=1.2e-25  Score=136.94  Aligned_cols=107  Identities=36%  Similarity=0.566  Sum_probs=89.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||+++++|.+++.....+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+....... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCCTTCEECEETTE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc---CCCEEEeeCCCccccCCCcc
Confidence            689999999999877778999999999999999999999999999999999999954   3459999999887653221 


Q ss_pred             --ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                        ......+++.|+|||.+.+ . ++.++|+||||
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  195 (276)
T 2yex_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG  195 (276)
T ss_dssp             ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHH
T ss_pred             hhcccCCccccCccChHHHhcCCCCCCcchHHHHH
Confidence              1234568899999999874 3 46789999987

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=3.9e-25  Score=139.23  Aligned_cols=103  Identities=33%  Similarity=0.511  Sum_probs=86.8

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+. |++.+.+. ....+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++...... 
T Consensus       133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~DfG~a~~~~~~-  207 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASIMAPA-  207 (348)
T ss_dssp             EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET---TTEEEECCCTTCBSSSSB-
T ss_pred             EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC---CCCEEEeeccCceecCCC-
Confidence            68897 58888775 4578999999999999999999999999999999999999964   346999999988765432 


Q ss_pred             cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                        ....|++.|+|||++.    +.++.++|+||||
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG  240 (348)
T 1u5q_A          208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  240 (348)
T ss_dssp             --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHH
T ss_pred             --CcccCCcceeCHhhhccccCCCCCcHHHHHHHH
Confidence              2357899999999884    3488899999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.91  E-value=2.6e-25  Score=140.15  Aligned_cols=106  Identities=25%  Similarity=0.336  Sum_probs=80.3

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||++ |++.+.+... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+.......
T Consensus       113 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~~  188 (362)
T 3pg1_A          113 TELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTADA  188 (362)
T ss_dssp             EECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECCTTC--------
T ss_pred             EccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC---CCCEEEEecCccccccccc
Confidence            57887 5888888654 57999999999999999999999999999999999999954   3459999999987654444


Q ss_pred             ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ......+++.|+|||++.+  .++.++|+||+|
T Consensus       189 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  221 (362)
T 3pg1_A          189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAG  221 (362)
T ss_dssp             -------CGGGCCHHHHTTCTTCCTHHHHHHHH
T ss_pred             ccceecccceecCcHHhcCCCCCCcHhHHHhHH
Confidence            3445678899999998864  488999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.91  E-value=8.1e-25  Score=135.69  Aligned_cols=107  Identities=21%  Similarity=0.273  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++..    ...+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~---~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD---EGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TSCEEECCCSSCEESC
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC---CCCEEEEecCcchhcc
Confidence            689999999998865    467999999999999999999999999999999999999953   3459999999876543


Q ss_pred             Cccc----------cccccccccccccccccc----cCCCccceeecC
Q 033837           77 PREQ----------FNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~----------~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                      ....          .....+++.|+|||.+.+    .++.++|+||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  233 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG  233 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHH
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHH
Confidence            2111          112356889999999862    268899999987

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.91  E-value=6.7e-25  Score=139.40  Aligned_cols=106  Identities=24%  Similarity=0.406  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH--HcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCH--KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||++ |+|.+++...  ..+++..+..++.|++.|+.|+|  ..+|+||||+|+||++..+ ....+||+|||++....
T Consensus       135 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~-~~~~~kL~DFG~a~~~~  212 (382)
T 2vx3_A          135 FEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQLG  212 (382)
T ss_dssp             EECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST-TSCCEEECCCTTCEETT
T ss_pred             EecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC-CCCcEEEEeccCceecc
Confidence            68886 5999999765  46999999999999999999999  5789999999999999532 23469999999987764


Q ss_pred             Cccccccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||++.+ .++.++|+||||
T Consensus       213 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG  245 (382)
T 2vx3_A          213 QR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLG  245 (382)
T ss_dssp             CC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cc--cccccCCccccChHHHcCCCCCcHHHHHHHH
Confidence            32  234578899999999985 589999999987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.91  E-value=1.8e-25  Score=136.52  Aligned_cols=105  Identities=21%  Similarity=0.337  Sum_probs=82.6

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++++|.+++.+.+  .+++..+..++.|++.|+.+||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~~l~Dfg~~~~~~~~  170 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASST  170 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT---TSCEEECCCCC-------
T ss_pred             EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeC---CCcEEEeecccccccccc
Confidence            68999999999997653  3889999999999999999999999999999999999953   345999999987654332


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  ....+++.|+|||.+. ..++.++|+||||
T Consensus       171 ~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  201 (278)
T 1byg_A          171 Q--DTGKLPVKWTAPEALREKKFSTKSDVWSFG  201 (278)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             c--cCCCccccccCHHHhCCCCCCchhcHHHHH
Confidence            1  2235677899999987 4588899999987

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.4e-25  Score=139.82  Aligned_cols=106  Identities=28%  Similarity=0.404  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++ +|.+++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++.......
T Consensus        91 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~---~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           91 FDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE---NGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             EECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECCCGGGSTTTSCC
T ss_pred             EEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcC---CCCEEEEecccceeccCCc
Confidence            578875 888888654 56899999999999999999999999999999999999954   3459999999987664322


Q ss_pred             -ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       ......+++.|+|||.+.+  .++.++|+||||
T Consensus       167 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  200 (346)
T 1ua2_A          167 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVG  200 (346)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHH
T ss_pred             ccCCcccccccccCchHhhCCCCCCchhhhHhHH
Confidence             2334578999999999863  378899999987

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.91  E-value=5.1e-25  Score=135.64  Aligned_cols=107  Identities=31%  Similarity=0.534  Sum_probs=86.0

Q ss_pred             CCCcCCCCHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVA--------KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      |||+++++|.+++..        .+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE---DGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT---TCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC---CCCEEEEeccch
Confidence            689999999999863        356999999999999999999999999999999999999954   345999999987


Q ss_pred             eecCCcc------ccccccccccccccccccc--cCCCccceeecC
Q 033837           73 VFFRPRE------QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~------~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .......      ......+++.|+|||.+.+  .++.++|+||||
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  214 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG  214 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHH
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHH
Confidence            6553321      1123468889999999863  488999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=1.3e-25  Score=140.64  Aligned_cols=91  Identities=35%  Similarity=0.693  Sum_probs=71.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-----cccccccccccccc
Q 033837           19 YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-----QFNELVGSLYYMAL   93 (110)
Q Consensus        19 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~~p   93 (110)
                      +++..+..++.|++.|+.|||+++++|+||+|+||+++.++ ...++++|||.+.......     ......|++.|+||
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  243 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK-SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP  243 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS-SCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCC-CceEEEeeccccccccccCccccccccccCCCccccCc
Confidence            35778889999999999999999999999999999996432 2369999999987653211     12345789999999


Q ss_pred             cccc---ccCCCccceeecC
Q 033837           94 EVLK---RNYGPEVDVWSML  110 (110)
Q Consensus        94 e~~~---~~~~~~~d~wslg  110 (110)
                      |.+.   ..++.++|+||||
T Consensus       244 E~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          244 EVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             HHHTCSSSCCCTHHHHHHHH
T ss_pred             hhhccCCCCCCcHHHHHHHH
Confidence            9986   3488999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.91  E-value=6.5e-25  Score=137.23  Aligned_cols=106  Identities=26%  Similarity=0.271  Sum_probs=87.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH--------KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      |||+++|+|.+++.+ ..+++.++..++.|++.|+.|||        +.+++|+||+|+||+++.   ...++++|||.+
T Consensus       119 ~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~~  194 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK---NGTCCIADLGLA  194 (342)
T ss_dssp             ECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT---TSCEEECCCTTC
T ss_pred             EeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC---CCCEEEEECCCc
Confidence            689999999999965 46899999999999999999999        889999999999999954   345999999998


Q ss_pred             eecCCccc-----ccccccccccccccccccc-------CCCccceeecC
Q 033837           73 VFFRPREQ-----FNELVGSLYYMALEVLKRN-------YGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~-----~~~~~~~~~~~~pe~~~~~-------~~~~~d~wslg  110 (110)
                      ........     .....+++.|+|||.+.+.       ++.++|+||||
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  244 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  244 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHH
Confidence            76643321     2334788999999998743       22579999987

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.91  E-value=3.4e-25  Score=135.82  Aligned_cols=106  Identities=25%  Similarity=0.387  Sum_probs=77.3

Q ss_pred             CCCcCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIV----AKGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++ ++.+++.    ....+++..+..++.|++.|+.|||++ +++|+||+|+||+++.   ...++++|||.+...
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA---LGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT---TCCEEBCCC------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC---CCCEEEeecCCcccc
Confidence            688874 8777664    346799999999999999999999998 9999999999999954   346999999998776


Q ss_pred             CCccccccccccccccccccc----c-ccCCCccceeecC
Q 033837           76 RPREQFNELVGSLYYMALEVL----K-RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~~~~~~~~~~~~pe~~----~-~~~~~~~d~wslg  110 (110)
                      ..........+++.|+|||.+    . ..++.++|+||+|
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG  200 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLG  200 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHH
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHH
Confidence            544433445788999999996    2 3478899999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.90  E-value=3.7e-25  Score=140.17  Aligned_cols=103  Identities=23%  Similarity=0.438  Sum_probs=73.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+ +++|.+++.. +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...+|++|||++......  
T Consensus       113 ~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~--  185 (367)
T 2fst_X          113 THLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLARHTADE--  185 (367)
T ss_dssp             EECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECC------------
T ss_pred             eccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC---CCCEEEeecccccccccc--
Confidence            3556 5788887754 67999999999999999999999999999999999999954   445999999988764332  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||++.+  .++.++|+||+|
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  217 (367)
T 2fst_X          186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG  217 (367)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred             CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence            234578999999999874  489999999987

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.2e-24  Score=137.48  Aligned_cols=105  Identities=27%  Similarity=0.489  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. |+|.+++.. +.+++.++..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus       109 ~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~a~~~~~~~~  183 (364)
T 3qyz_A          109 QDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHD  183 (364)
T ss_dssp             EECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECCGGGC
T ss_pred             EcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC---CCCEEEEeCcceEecCCCCC
Confidence            57776 489888855 56999999999999999999999999999999999999953   44599999999877643322


Q ss_pred             ----ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                          .....|++.|+|||++. + .++.++|+||+|
T Consensus       184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  219 (364)
T 3qyz_A          184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG  219 (364)
T ss_dssp             BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHH
T ss_pred             ccccccccccccCCCCCHHhcCCCCCCcchhHHHHH
Confidence                23357899999999875 3 389999999987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.90  E-value=5.9e-25  Score=141.80  Aligned_cols=109  Identities=21%  Similarity=0.275  Sum_probs=83.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||. |+|.+++... ....+..+..++.|++.|+.|||+++|+||||+|+||++..++  ....++++|||++.....
T Consensus        97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A           97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred             EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence            68886 5999999765 3456667788999999999999999999999999999996432  234578999999877643


Q ss_pred             cc----ccccccccccccccccccc----cCCCccceeecC
Q 033837           78 RE----QFNELVGSLYYMALEVLKR----NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~----~~~~~~~~~~~~~pe~~~~----~~~~~~d~wslg  110 (110)
                      ..    ......||+.|+|||++.+    .++.++|+||||
T Consensus       176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG  216 (432)
T 3p23_A          176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG  216 (432)
T ss_dssp             ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHH
T ss_pred             CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHH
Confidence            22    1233578999999999862    367799999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.90  E-value=4.1e-25  Score=137.55  Aligned_cols=107  Identities=28%  Similarity=0.495  Sum_probs=89.4

Q ss_pred             CCCcCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEE-GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||++.+ ++|.+++...+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.  ....+|++|||.+.......
T Consensus       127 ~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Dfg~~~~~~~~~  204 (320)
T 3a99_A          127 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTV  204 (320)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECCSSC
T ss_pred             EEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeCcccccccccc
Confidence            467765 899999988889999999999999999999999999999999999999962  23469999999987765432


Q ss_pred             ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                       .....+++.|+|||++.+ . ++.++|+||||
T Consensus       205 -~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  236 (320)
T 3a99_A          205 -YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG  236 (320)
T ss_dssp             -BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHH
T ss_pred             -ccCCCCCccCCChHHhccCCCCCccchHHhHH
Confidence             234568899999999873 3 46789999987

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.90  E-value=4.1e-25  Score=135.49  Aligned_cols=107  Identities=21%  Similarity=0.347  Sum_probs=87.5

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++++|.+++... +.+++..+..++.|++.|+.++|+++++|+||+|+||+++.++   .++++|||.+.......
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~---~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT---EEEECCCTTCEECCC-C
T ss_pred             EecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC---CEEEccccccccccccc
Confidence            5899999999999764 6799999999999999999999999999999999999996543   59999999987764332


Q ss_pred             c----cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .    .....+++.|+|||.+.+ .++.++|+||||
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG  211 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHH
Confidence            1    122356678999999874 478899999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=6.1e-25  Score=136.89  Aligned_cols=106  Identities=22%  Similarity=0.417  Sum_probs=73.7

Q ss_pred             CCCcCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVA---KGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+. |+|.+++..   .+.+++..+..++.|++.|+.|||+++  ++|+||+|+||+++.   ...++++|||.+...
T Consensus       113 ~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~~~~~  188 (337)
T 3ll6_A          113 TELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTI  188 (337)
T ss_dssp             EECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECT---TSCEEBCCCTTCBCC
T ss_pred             EEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECC---CCCEEEecCccceec
Confidence            57886 689888864   467999999999999999999999999  999999999999954   345999999998765


Q ss_pred             CCcccc-------------cccccccccccccccc----ccCCCccceeecC
Q 033837           76 RPREQF-------------NELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        76 ~~~~~~-------------~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                      ......             ....+++.|+|||++.    ..++.++|+||||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG  240 (337)
T 3ll6_A          189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG  240 (337)
T ss_dssp             SSCC-------------------------------CCTTSCSSHHHHHHHHH
T ss_pred             cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHH
Confidence            432211             1345788999999983    2378899999987

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=1.2e-24  Score=134.65  Aligned_cols=107  Identities=28%  Similarity=0.508  Sum_probs=80.5

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++++|.+++..    ...+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~---~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcC---CCCEEEEeccceeeec
Confidence            689999999998863    466999999999999999999999999999999999999953   4459999999887654


Q ss_pred             Cccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           77 PREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        77 ~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .... .....+++.|+|||.+.+ .++.++|+||||
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  223 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG  223 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence            3222 233567889999999874 588899999987

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.90  E-value=1.7e-25  Score=136.60  Aligned_cols=107  Identities=30%  Similarity=0.592  Sum_probs=86.6

Q ss_pred             CCCcCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcC-----CeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVAK----GHYTERVAAAVMKTIVEVVQVCHKHG-----VMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      |||+++++|.+++...    ..+++..+..++.|++.|+.|||+++     ++|+||+|+||+++.   ...++++|||.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~---~~~~kl~dfg~  162 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG---KQNVKLGDFGL  162 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS---SSCEEECCCCH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC---CCCEEEecCch
Confidence            6899999999998643    34999999999999999999999999     999999999999953   44599999998


Q ss_pred             ceecCCccc-cccccccccccccccccc-cCCCccceeecC
Q 033837           72 SVFFRPREQ-FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +........ .....+++.|+|||.+.+ .++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  203 (279)
T 2w5a_A          163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG  203 (279)
T ss_dssp             HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHH
T ss_pred             heeeccccccccccCCCccccChHHhccCCCCchhhHHHHH
Confidence            866543221 233567889999999874 588899999987

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.90  E-value=1.6e-24  Score=139.79  Aligned_cols=109  Identities=25%  Similarity=0.402  Sum_probs=80.2

Q ss_pred             CCCcCCCCHHHHHHhCCCC-------CHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC----------CCce
Q 033837            1 MKLCEEGELVDRIVAKGHY-------TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK----------KSFS   63 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~-------~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~----------~~~~   63 (110)
                      ||||. |+|.+++......       .+..+..++.|++.|+.|||+++++||||+|+||+++..+          ....
T Consensus        88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceE
Confidence            68996 5999999765432       2234567999999999999999999999999999997532          3457


Q ss_pred             EEEeecccceecCCccc-----cccccccccccccccccc--------cCCCccceeecC
Q 033837           64 LKAIDFGLSVFFRPREQ-----FNELVGSLYYMALEVLKR--------NYGPEVDVWSML  110 (110)
Q Consensus        64 ~~l~d~g~~~~~~~~~~-----~~~~~~~~~~~~pe~~~~--------~~~~~~d~wslg  110 (110)
                      ++++|||++........     .....||+.|+|||++.+        .++.++|+||||
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG  226 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG  226 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHH
Confidence            99999999887654321     123578999999999853        378899999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.90  E-value=6.6e-25  Score=135.26  Aligned_cols=107  Identities=23%  Similarity=0.462  Sum_probs=85.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      |||+++++|.+++.. ...+++..+..++.|++.|+.|+|+++++|+||+|+||+++.   ...++++|||.+...... 
T Consensus        95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT---TSCEEECCCHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECC---CCCEEEEECCCCccccccc
Confidence            689999999998875 467999999999999999999999999999999999999953   345999999986543211 


Q ss_pred             ccccccccccccccccccc------ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+.      ..++.++|+||||
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  209 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG  209 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHH
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHH
Confidence            1123346788999999873      3478899999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.90  E-value=1.4e-24  Score=134.70  Aligned_cols=106  Identities=21%  Similarity=0.341  Sum_probs=84.7

Q ss_pred             CCCcCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-
Q 033837            1 MKLCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-   78 (110)
                      |||+++++|.+++...+ .+++..+..++.|++.|+.|||+++++|+||+|+||+++.    ..++++|||++...... 
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~----~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN----GKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeC----CCEEEeecCCcccccccc
Confidence            78999999999997654 7999999999999999999999999999999999999952    35899999987654211 


Q ss_pred             -----cccccccccccccccccccc----------cCCCccceeecC
Q 033837           79 -----EQFNELVGSLYYMALEVLKR----------NYGPEVDVWSML  110 (110)
Q Consensus        79 -----~~~~~~~~~~~~~~pe~~~~----------~~~~~~d~wslg  110 (110)
                           .......|++.|+|||.+.+          .++.++|+||||
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG  230 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG  230 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence                 11223457889999999853          267789999987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.90  E-value=2.4e-24  Score=135.26  Aligned_cols=105  Identities=28%  Similarity=0.448  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. |+|.+++.. +.+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+........
T Consensus        93 ~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~---~~~~kl~Dfg~a~~~~~~~~  167 (353)
T 2b9h_A           93 QELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAA  167 (353)
T ss_dssp             ECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCEEECCCTTCEECC----
T ss_pred             EeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcC---CCcEEEEecccccccccccc
Confidence            57887 588888765 57999999999999999999999999999999999999954   44599999999876542211


Q ss_pred             -----------ccccccccccccccccc--ccCCCccceeecC
Q 033837           81 -----------FNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        81 -----------~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                                 .....|++.|+|||++.  ..++.++|+||||
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  210 (353)
T 2b9h_A          168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG  210 (353)
T ss_dssp             ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHH
T ss_pred             cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHH
Confidence                       12246789999999875  3488899999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.90  E-value=6.8e-25  Score=137.50  Aligned_cols=106  Identities=21%  Similarity=0.411  Sum_probs=88.9

Q ss_pred             CCCcCCCCHHHH------HHh--CCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDR------IVA--KGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~------l~~--~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      |||+++|+|.++      +.+  ...+++..+..++.|++.|+.|||+ ++++|+||+|+||+++.   ...++++|||.
T Consensus       122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~---~~~~kl~dfg~  198 (348)
T 2pml_X          122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK---NGRVKLSDFGE  198 (348)
T ss_dssp             EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT---TSCEEECCCTT
T ss_pred             EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC---CCcEEEecccc
Confidence            689999999998      655  5679999999999999999999999 99999999999999954   34599999999


Q ss_pred             ceecCCcccccccccccccccccccccc--CCC-ccceeecC
Q 033837           72 SVFFRPREQFNELVGSLYYMALEVLKRN--YGP-EVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~-~~d~wslg  110 (110)
                      +...... ......+++.|+|||.+.+.  ++. ++|+||||
T Consensus       199 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  239 (348)
T 2pml_X          199 SEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG  239 (348)
T ss_dssp             CEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHH
T ss_pred             ccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHH
Confidence            8765443 23345788999999999743  555 89999987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.90  E-value=2.1e-24  Score=132.57  Aligned_cols=108  Identities=28%  Similarity=0.420  Sum_probs=87.8

Q ss_pred             CCCcCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK---GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      |||+++++|.+++...   ..+++..+..++.|++.|+.|||+++++|+||+|+||+++..  ...++++|||.+.....
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECC--CCCEEEeecccccccCC
Confidence            6899999999999764   246789999999999999999999999999999999999642  34599999999876643


Q ss_pred             ccc-cccccccccccccccccc---cCCCccceeecC
Q 033837           78 REQ-FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~-~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                      ... .....+++.|+|||.+.+   .++.++|+||||
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  212 (295)
T 2clq_A          176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG  212 (295)
T ss_dssp             -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHH
T ss_pred             CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHH
Confidence            222 234568899999999863   278899999987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=2.3e-24  Score=133.63  Aligned_cols=105  Identities=32%  Similarity=0.566  Sum_probs=83.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      || +.+++|.+++.+...+++..+..++.|++.|+.|||+++++|+||+|+||+++.    ..++++|||.+........
T Consensus       107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~~~~~~~~~  181 (313)
T 3cek_A          107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT  181 (313)
T ss_dssp             EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCC------
T ss_pred             Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC----CeEEEeeccccccccCccc
Confidence            46 457799999998889999999999999999999999999999999999999952    4599999999876543221


Q ss_pred             ---cccccccccccccccccc------------cCCCccceeecC
Q 033837           81 ---FNELVGSLYYMALEVLKR------------NYGPEVDVWSML  110 (110)
Q Consensus        81 ---~~~~~~~~~~~~pe~~~~------------~~~~~~d~wslg  110 (110)
                         .....+++.|+|||.+.+            .++.++|+||||
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG  226 (313)
T 3cek_A          182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  226 (313)
T ss_dssp             --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHH
T ss_pred             cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHH
Confidence               223568899999999853            467799999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.89  E-value=3.2e-24  Score=130.20  Aligned_cols=103  Identities=14%  Similarity=0.196  Sum_probs=83.9

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecC
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFR   76 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~   76 (110)
                      |||+++|+|.+++....  .+++.++..++.|++.|+.|||+++  ++|+|++|+||+++.   ...+++.||++.....
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~---~~~~~l~~~~~~~~~~  164 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE---DMTARISMADVKFSFQ  164 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT---TSCEEEEGGGSCCTTS
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC---CcceeEEeccceeeec
Confidence            68999999999998764  5899999999999999999999999  999999999999953   3447888877654322


Q ss_pred             Ccccccccccccccccccccccc-CC---CccceeecC
Q 033837           77 PREQFNELVGSLYYMALEVLKRN-YG---PEVDVWSML  110 (110)
Q Consensus        77 ~~~~~~~~~~~~~~~~pe~~~~~-~~---~~~d~wslg  110 (110)
                      .    ....+++.|+|||.+.+. ++   .++|+||||
T Consensus       165 ~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG  198 (271)
T 3kmu_A          165 S----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA  198 (271)
T ss_dssp             C----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred             c----cCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence            2    234678899999998742 33   379999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.89  E-value=3.5e-24  Score=133.49  Aligned_cols=106  Identities=24%  Similarity=0.331  Sum_probs=71.0

Q ss_pred             CCCcCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEEGELVDRIVA-----KGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+++ +|.+++..     ...+++..+..++.|++.|+.|||++ +++|+||+|+||+++.   ...+|++|||.+..
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR---SGNIKLCDFGISGQ  175 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET---TTEEEECCCSSSCC
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC---CCCEEEccCCCcee
Confidence            688885 77777653     56799999999999999999999998 9999999999999954   34699999999877


Q ss_pred             cCCcccccccccccccccccccc-----ccCCCccceeecC
Q 033837           75 FRPREQFNELVGSLYYMALEVLK-----RNYGPEVDVWSML  110 (110)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~d~wslg  110 (110)
                      ...........|++.|+|||.+.     ..++.++|+||||
T Consensus       176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG  216 (327)
T 3aln_A          176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG  216 (327)
T ss_dssp             ------------------------------CCSHHHHHHHH
T ss_pred             cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHH
Confidence            65443333447889999999983     3488899999987

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.89  E-value=1.2e-24  Score=134.69  Aligned_cols=107  Identities=27%  Similarity=0.482  Sum_probs=89.3

Q ss_pred             CCC-cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKL-CEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~-~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||| +.+++|.+++.+.+.+++..+..++.|++.|+.|||+++++|+||+|+||+++.  ....++++|||.+.......
T Consensus       117 ~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~dfg~~~~~~~~~  194 (312)
T 2iwi_A          117 LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDFGSGALLHDEP  194 (312)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEECCCSSCEECCSSC
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEEEcchhhhcccCc
Confidence            456 678999999988888999999999999999999999999999999999999962  23469999999987765432


Q ss_pred             ccccccccccccccccccc-cC-CCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NY-GPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~-~~~~d~wslg  110 (110)
                       .....+++.|+|||.+.+ .+ +.++|+||||
T Consensus       195 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  226 (312)
T 2iwi_A          195 -YTDFDGTRVYSPPEWISRHQYHALPATVWSLG  226 (312)
T ss_dssp             -BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHH
T ss_pred             -ccccCCcccccCceeeecCCCCCccchHHHHH
Confidence             234568889999999874 33 4589999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.89  E-value=6.5e-24  Score=131.46  Aligned_cols=106  Identities=25%  Similarity=0.445  Sum_probs=85.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      |||++ |+|.+++. .+++++..+..++.|++.|+.|||+++++|+||+|+||+++.+  ...+|++|||.+....... 
T Consensus       101 ~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~  176 (320)
T 2i6l_A          101 QEYME-TDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE--DLVLKIGDFGLARIMDPHYS  176 (320)
T ss_dssp             EECCS-EEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TTEEEECCCTTCBCC-----
T ss_pred             eeccC-CCHHHHhh-cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCeEEEccCccccccCCCcc
Confidence            57887 58998875 4679999999999999999999999999999999999999632  3468999999887653221 


Q ss_pred             ---cccccccccccccccccc--ccCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLK--RNYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~--~~~~~~~d~wslg  110 (110)
                         ......+++.|+|||.+.  ..++.++|+||||
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  212 (320)
T 2i6l_A          177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG  212 (320)
T ss_dssp             ---CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHH
T ss_pred             cccccccccccccccCcHHhcCcccCCchhhhHhHH
Confidence               122345688899999886  3488899999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.89  E-value=5.7e-24  Score=134.73  Aligned_cols=102  Identities=25%  Similarity=0.448  Sum_probs=80.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. ++|.+.+.  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......  
T Consensus       126 ~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~---~~~~kL~Dfg~a~~~~~~--  197 (371)
T 4exu_A          126 MPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE---DCELKILDFGLARHADAE--  197 (371)
T ss_dssp             EECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECSTTCC--------
T ss_pred             Ecccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC---CCCEEEEecCcccccccC--
Confidence            46776 57777663  45999999999999999999999999999999999999953   445999999988754332  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+  .++.++|+||||
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  229 (371)
T 4exu_A          198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG  229 (371)
T ss_dssp             --CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred             cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence            234567899999999874  489999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.89  E-value=9.8e-24  Score=130.17  Aligned_cols=106  Identities=21%  Similarity=0.412  Sum_probs=85.7

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||++++ +.+++..  ...+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......
T Consensus        87 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~---~~~~kl~dfg~~~~~~~~  162 (305)
T 2wtk_C           87 MEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPF  162 (305)
T ss_dssp             EECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TCCEEECCCTTCEECCTT
T ss_pred             ehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcC---CCcEEeeccccccccCcc
Confidence            6888875 7777754  467999999999999999999999999999999999999954   345999999998765432


Q ss_pred             ---cccccccccccccccccccc-c--CCCccceeecC
Q 033837           79 ---EQFNELVGSLYYMALEVLKR-N--YGPEVDVWSML  110 (110)
Q Consensus        79 ---~~~~~~~~~~~~~~pe~~~~-~--~~~~~d~wslg  110 (110)
                         .......+++.|+|||.+.+ .  ++.++|+||||
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  200 (305)
T 2wtk_C          163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAG  200 (305)
T ss_dssp             CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHH
T ss_pred             ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHH
Confidence               12234568899999999864 2  46789999987

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.88  E-value=1.4e-24  Score=139.34  Aligned_cols=100  Identities=13%  Similarity=0.123  Sum_probs=79.3

Q ss_pred             CCCCHHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            5 EEGELVDRIVA-------KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         5 ~~g~l~~~l~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      .+++|.+++..       ...+++..+..++.|++.|+.|||+++|+||||||+||+++.+   ..+||+|||++.....
T Consensus       187 ~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~---~~~kL~DFG~a~~~~~  263 (413)
T 3dzo_A          187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGA  263 (413)
T ss_dssp             CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTE
T ss_pred             hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC---CeEEEEeccceeecCC
Confidence            35688887741       2347778889999999999999999999999999999999543   4499999999876543


Q ss_pred             ccccccccccccccccccc----------cc-cCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVL----------KR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~----------~~-~~~~~~d~wslg  110 (110)
                      .  .....| +.|+|||++          .. .++.++|+||||
T Consensus       264 ~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG  304 (413)
T 3dzo_A          264 S--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG  304 (413)
T ss_dssp             E--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred             c--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence            3  334566 899999998          32 377799999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.88  E-value=1.9e-23  Score=129.45  Aligned_cols=106  Identities=27%  Similarity=0.396  Sum_probs=76.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHc-CCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKH-GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+ ++.+...... ...+++..+..++.|++.|+.|||++ +++|+||+|+||+++.   ...++++|||.+......
T Consensus       103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE---RGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT---TSCEEECCCTTC------
T ss_pred             Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC---CCCEEEEECCCchhccCC
Confidence            5788 4455554443 57899999999999999999999995 9999999999999953   445999999988766544


Q ss_pred             ccccccccccccccccccc------ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                      .......+++.|+|||.+.      ..++.++|+||||
T Consensus       179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  216 (318)
T 2dyl_A          179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG  216 (318)
T ss_dssp             --------CCTTCCHHHHC--------CCTHHHHHHHH
T ss_pred             ccccccCCCccccChhhcccccccccCCccccchhhHH
Confidence            3334457889999999984      2478899999987

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.88  E-value=8.7e-24  Score=132.94  Aligned_cols=102  Identities=25%  Similarity=0.445  Sum_probs=80.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+. ++|.+.+.  ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.   ...++++|||.+......  
T Consensus       108 ~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~---~~~~kl~Dfg~~~~~~~~--  179 (353)
T 3coi_A          108 MPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE---DCELKILDFGLARHADAE--  179 (353)
T ss_dssp             EECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT---TCCEEECSTTCTTC------
T ss_pred             ecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC---CCcEEEeecccccCCCCC--
Confidence            56776 47777653  35999999999999999999999999999999999999953   345999999988654322  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+  .++.++|+||||
T Consensus       180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG  211 (353)
T 3coi_A          180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG  211 (353)
T ss_dssp             ----CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred             ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence            233567899999998864  488999999987

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.86  E-value=1.8e-22  Score=124.54  Aligned_cols=75  Identities=36%  Similarity=0.604  Sum_probs=66.4

Q ss_pred             CCCcCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+++....  .+++..+..++.|++.|+.|||+++++|+||+|+||+++..+....++++|||++...
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            69999999999998653  6999999999999999999999999999999999999975433567999999987654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.84  E-value=4.9e-23  Score=135.95  Aligned_cols=95  Identities=26%  Similarity=0.345  Sum_probs=79.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++++|.+++.+        +..++.|++.++.|||+++|+||||||+||+++.     .+|++|||+++.......
T Consensus       418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCHHH
T ss_pred             EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----eEEEEECccCEECCCccc
Confidence            799999999999865        5689999999999999999999999999999953     699999999988755322


Q ss_pred             --------cccccccccccccccccc---cCCCccceee
Q 033837           81 --------FNELVGSLYYMALEVLKR---NYGPEVDVWS  108 (110)
Q Consensus        81 --------~~~~~~~~~~~~pe~~~~---~~~~~~d~ws  108 (110)
                              .....||+.|+|||++..   .|+..+|+||
T Consensus       485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws  523 (540)
T 3en9_A          485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWE  523 (540)
T ss_dssp             HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHH
T ss_pred             cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHH
Confidence                    124678999999999963   3777788887

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.75  E-value=3.7e-19  Score=109.45  Aligned_cols=65  Identities=12%  Similarity=0.099  Sum_probs=54.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      |||+++++|.+++..+  ..+.++..++.|++.|+.|+|+++++|+||+|+||+++.++   .+++++.+
T Consensus       110 ~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g---~~kl~~~~  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG---DVVLAYPA  174 (286)
T ss_dssp             EECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS---CEEECSCC
T ss_pred             EEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC---CEEEEecc
Confidence            7999999999998543  45667889999999999999999999999999999996443   47776443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.69  E-value=2.2e-18  Score=105.94  Aligned_cols=64  Identities=28%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      |||+++|+|.+ +.    .  .....++.|++.|+.++|+++++|+||+|.||+++    ...++++|||.+...
T Consensus       179 mE~~~g~~L~~-l~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          179 MELIDAKELYR-VR----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             EECCCCEEGGG-CC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEECCCTTCEET
T ss_pred             EEecCCCcHHH-cc----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEEEECCCCeEC
Confidence            78999999988 42    1  23456999999999999999999999999999996    345999999988653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.46  E-value=3.5e-14  Score=86.19  Aligned_cols=69  Identities=25%  Similarity=0.366  Sum_probs=54.0

Q ss_pred             CCCcCC-C----CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837            1 MKLCEE-G----ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus         1 ~e~~~~-g----~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      |||+.+ |    +|.+....   .++..+..++.|++.++.++| +.+++|+|++|.||+++.     .++++|||.+..
T Consensus       147 mE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~-----~~~liDFG~a~~  218 (258)
T 1zth_A          147 MEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-----KVYFIDMGQAVT  218 (258)
T ss_dssp             EECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS-----SEEECCCTTCEE
T ss_pred             EEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC-----cEEEEECccccc
Confidence            688842 3    55554322   234567889999999999999 999999999999999953     589999999876


Q ss_pred             cCC
Q 033837           75 FRP   77 (110)
Q Consensus        75 ~~~   77 (110)
                      ...
T Consensus       219 ~~~  221 (258)
T 1zth_A          219 LRH  221 (258)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.22  E-value=6.6e-12  Score=80.20  Aligned_cols=69  Identities=22%  Similarity=0.299  Sum_probs=52.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCC-------ceEEEeecccce
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS-------FSLKAIDFGLSV   73 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~-------~~~~l~d~g~~~   73 (110)
                      |||++|+++.+...    .  ..+..++.|++.++.++|++|++||||+|.|||++.++..       ..+.++||+-+.
T Consensus       190 ME~i~G~~L~~l~~----~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          190 MSLVDALPMRQVSS----V--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EECCSCEEGGGCCC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             EEecCCccHhhhcc----c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            78998877765421    1  2345678999999999999999999999999999764421       136799998665


Q ss_pred             ec
Q 033837           74 FF   75 (110)
Q Consensus        74 ~~   75 (110)
                      ..
T Consensus       264 ~~  265 (397)
T 4gyi_A          264 SM  265 (397)
T ss_dssp             ET
T ss_pred             cC
Confidence            54

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.34  E-value=7.1e-07  Score=56.25  Aligned_cols=71  Identities=18%  Similarity=0.296  Sum_probs=51.9

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK----------------------------------------   40 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~----------------------------------------   40 (110)
                      |||++|..+.+..  ...+++.+...++.++...+..+|+                                        
T Consensus       120 me~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (359)
T 3dxp_A          120 MEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM  197 (359)
T ss_dssp             EECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred             EEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence            5777776654311  1336677788888899999999996                                        


Q ss_pred             ------------------cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 ------------------HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ------------------~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                                        ..++|+|+++.||+++.++. ..+.++||+.+..
T Consensus       198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-~v~~viDwe~a~~  248 (359)
T 3dxp_A          198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-RVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-CEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-cEEEEECcccccc
Confidence                              35899999999999964332 3468999997754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.30  E-value=6e-07  Score=54.17  Aligned_cols=66  Identities=18%  Similarity=0.181  Sum_probs=47.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK----------------------------------------   40 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~----------------------------------------   40 (110)
                      |||++|.++.+...     +......++.++..++..+|+                                        
T Consensus        89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            68888888776521     112234667788888888998                                        


Q ss_pred             -------------------cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 -------------------HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 -------------------~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                                         ..++|+|+++.||+++.   ...+.++||+.+..
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD---GKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET---TEEEEECCCTTCEE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC---CcEEEEEEchhccc
Confidence                               44899999999999953   23457999987644

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.09  E-value=1.1e-06  Score=52.62  Aligned_cols=30  Identities=27%  Similarity=0.107  Sum_probs=23.7

Q ss_pred             CeecCCCCCceEEEeCCCCceEEEeecccceec
Q 033837           43 VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF   75 (110)
Q Consensus        43 i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~   75 (110)
                      ++|+|++|.||+++.   ...+.++||+.+...
T Consensus       186 l~HgDl~~~Nil~~~---~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          186 VTHGDACLPNIMVEN---GRFSGFIDCGRLGVA  215 (264)
T ss_dssp             EECSSCCGGGEEEET---TEEEEECCCTTCEEE
T ss_pred             EECCCCCCCcEEEEC---CcEEEEEcchhcccC
Confidence            899999999999953   234569999976543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.67  E-value=5.2e-05  Score=46.73  Aligned_cols=32  Identities=31%  Similarity=0.517  Sum_probs=24.6

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+++.||+++.++ ...+.++||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~-~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEK-NTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTT-TEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCC-CCEEEEEeCCCCcc
Confidence            369999999999996431 34578999987654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.04  E-value=0.0022  Score=39.68  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=24.0

Q ss_pred             CCeecCCCCCceEEEeCCC-CceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKK-SFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~-~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.|++++.++. ...+.++||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            4799999999999964211 23357999986654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.69  E-value=0.0056  Score=37.93  Aligned_cols=31  Identities=19%  Similarity=0.284  Sum_probs=24.7

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||+++.+   ..+.++||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~---~~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGEN---EQIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGG---GCEEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCC---CcEEEEehhhccc
Confidence            569999999999999532   3489999987644

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.62  E-value=0.017  Score=37.17  Aligned_cols=32  Identities=19%  Similarity=0.427  Sum_probs=25.5

Q ss_pred             HHcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           39 HKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        39 h~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      +...++|+|+.+.||+++.++    +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~----~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS----TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC----EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC----CEEEeCccccc
Confidence            356799999999999995432    89999987654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.18  E-value=0.033  Score=33.44  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=22.8

Q ss_pred             CeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           43 VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        43 i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ++|+|+.+.||+++.   ...+-++||+.+..
T Consensus       195 l~HGDl~~~Nil~~~---~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDE---GKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEET---TEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEEC---CeEEEEEECccccc
Confidence            789999999999953   23456899987654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=93.98  E-value=0.024  Score=34.98  Aligned_cols=31  Identities=29%  Similarity=0.428  Sum_probs=23.5

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+++|+|+.+.||+++.+   ..+.++||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~~~---~~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGD---ELSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEeCC---ceEEEecchhccC
Confidence            358999999999999632   2347999986543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.87  E-value=0.038  Score=34.59  Aligned_cols=31  Identities=10%  Similarity=0.247  Sum_probs=24.2

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||+++.   ...+.++||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~---~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRD---FQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEET---TEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeC---CcEEEEEccccccc
Confidence            46899999999999962   23468999987654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.67  E-value=0.055  Score=33.62  Aligned_cols=34  Identities=18%  Similarity=0.383  Sum_probs=25.2

Q ss_pred             cCCeecCCCCCceEEEeCCC-CceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKK-SFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~-~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||++..+.. ...+.++||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            46899999999999954211 13579999987654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.10  E-value=0.13  Score=31.82  Aligned_cols=29  Identities=17%  Similarity=0.115  Sum_probs=23.1

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.||+++ +    .+.++||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~----~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D----GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S----SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C----CCEEEECCCCCc
Confidence            3478999999999995 2    488999976544

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=92.95  E-value=0.18  Score=31.79  Aligned_cols=29  Identities=41%  Similarity=0.583  Sum_probs=22.5

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||+++.+    .+.++||..+..
T Consensus       213 ~l~HgDl~~~Nil~~~~----~~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNK----CLRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGGEEECC-----CEEECCCTTCEE
T ss_pred             EEEeCCCCcccEEecCC----cEEEEEecCCCC
Confidence            58999999999998432    278999976543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.19  E-value=0.18  Score=31.63  Aligned_cols=31  Identities=23%  Similarity=0.330  Sum_probs=24.1

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ..++|+|+.+.|++++.+   ..+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~---~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNE---ESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGG---GCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCC---CeEEEEECCCCee
Confidence            358999999999999532   3479999976654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.99  E-value=0.21  Score=31.78  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=24.2

Q ss_pred             HcCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           40 KHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        40 ~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      ...++|+|+.+.||++..+    .+.++||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~----~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH----ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS----CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC----CeEEEeCccccc
Confidence            3568999999999999542    278999976654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.75  E-value=0.13  Score=33.49  Aligned_cols=17  Identities=29%  Similarity=0.442  Sum_probs=14.4

Q ss_pred             CCeecCCCCCceEEEeC
Q 033837           42 GVMHHDLNPKKILFVNK   58 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~   58 (110)
                      .++|+|+.+.||++..+
T Consensus       250 v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             EEEeCCCCCCeEEeeCC
Confidence            48999999999999753

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.63  E-value=0.17  Score=32.55  Aligned_cols=32  Identities=28%  Similarity=0.445  Sum_probs=24.5

Q ss_pred             CeecCCCCCceEEEeC---CCCceEEEeeccccee
Q 033837           43 VMHHDLNPKKILFVNK---KKSFSLKAIDFGLSVF   74 (110)
Q Consensus        43 i~h~~l~~~~il~~~~---~~~~~~~l~d~g~~~~   74 (110)
                      ++|+|+.+.||++.++   +....+.++||..+..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999999542   2234589999987654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=90.25  E-value=0.19  Score=30.73  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=22.1

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.|++. .++   .+.++||..+..
T Consensus       174 ~l~HgDl~~~Nil~-~~~---~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFLD-TGE---RMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEEE-CSS---CEEECCCTTCEE
T ss_pred             eeeccCCCcCCEEE-CCC---CEEEEecccccC
Confidence            38999999999994 222   378999986654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=89.80  E-value=0.23  Score=31.83  Aligned_cols=33  Identities=27%  Similarity=0.456  Sum_probs=24.6

Q ss_pred             CCeecCCCCCceEEEeCC-CCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||++..++ ....+.++||..+..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            489999999999997541 123589999987654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.68  E-value=0.23  Score=32.69  Aligned_cols=15  Identities=27%  Similarity=0.290  Sum_probs=13.8

Q ss_pred             CCeecCCCCCceEEE
Q 033837           42 GVMHHDLNPKKILFV   56 (110)
Q Consensus        42 ~i~h~~l~~~~il~~   56 (110)
                      .++|+|+.+.||++.
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            489999999999996

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=82.55  E-value=0.88  Score=29.69  Aligned_cols=29  Identities=24%  Similarity=0.446  Sum_probs=22.3

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.|++ ..   ...+.++||..+..
T Consensus       263 ~~~H~D~~~~N~l-~~---~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QT---QNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-EC---SSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cC---CCcEEEEecccCCc
Confidence            4799999999999 32   23489999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	110
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-21
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-20
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-18
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-16
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-15
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-13
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-11
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-05

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 82.8 bits (204), Expect = 8e-21
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +    GEL +++  +    +E  A   M+ + + +   H++  +H DL P+ I+F   K
Sbjct: 102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-K 160

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +S  LK IDFGL+    P++      G+  + A EV + +  G   D+WS+
Sbjct: 161 RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 211

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 81.7 bits (201), Expect = 9e-21
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L ++GEL D +  K   +E+    +M+ ++EV+   HK  ++H DL P+ IL      
Sbjct: 89  FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DD 145

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL-------KRNYGPEVDVWSM 109
             ++K  DFG S    P E+  E+ G+  Y+A E++          YG EVD+WS 
Sbjct: 146 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 201

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.0 bits (202), Expect = 1e-20
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L   GEL DRIV KG YTER A+ ++  +++ V+  H  G++H DL P+ +L+ +  +
Sbjct: 86  MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 145

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              +   DFGLS    P    +   G+  Y+A EVL  + Y   VD WS+
Sbjct: 146 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 195

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 2e-20
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++    G +   +     + E+  A  +  +   +  CH   V+H D+ P+ +L  +   
Sbjct: 85  LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-- 142

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              LK  DFG SV   P  +   L G+L Y+  E+++ R +  +VD+WS+
Sbjct: 143 -GELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 190

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.9 bits (199), Expect = 5e-20
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++    GEL DRI A+ +  +E      M+   E ++  H+H ++H D+ P+ I+    K
Sbjct: 105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM-CETK 163

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           K+ S+K IDFGL+    P E       +  + A E++ R   G   D+W++
Sbjct: 164 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 214

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 5e-20
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNK 58
            +L   G L   +        +V  +  + I++ +Q  H     ++H DL    I     
Sbjct: 91  TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP 150

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRNYGPEVDVWSM 109
             + S+K  D GL+   R       ++G+  +MA E+ +  Y   VDV++ 
Sbjct: 151 --TGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAF 198

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 2e-19
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
           M+  + GEL  RI  +G   +TER A+ +MK+I E +Q  H   + H D+ P+ +L+ +K
Sbjct: 88  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 147

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           + +  LK  DFG +              + YY+A EVL    Y    D+WS+
Sbjct: 148 RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 199

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 7e-19
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCH-KHGVMHHDLNPKKILFVNKK 59
           M+  + G L   +   G   E++   V   +++ +     KH +MH D+ P  IL  ++ 
Sbjct: 83  MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR- 141

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
               +K  DFG+S         N  VG+  YM+ E L+  +Y  + D+WSM
Sbjct: 142 --GEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.2 bits (187), Expect = 1e-18
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+ C         V K    E   AAV    ++ +   H H ++H D+    IL     +
Sbjct: 94  MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SE 150

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL----KRNYGPEVDVWSM 109
              +K  DFG +    P   F   VG+ Y+MA EV+    +  Y  +VDVWS+
Sbjct: 151 PGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 2e-18
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           ++ C  GEL DRI       E  A      ++  V   H  G+ H D+ P+ +L   +  
Sbjct: 82  LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER-- 139

Query: 61  SFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
             +LK  DFGL+  FR   +    N++ G+L Y+A E+LKR   +   VDVWS 
Sbjct: 140 -DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 2e-18
 Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 3   LCEEGELVDRIVAKG-HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKS 61
                ++ +RI        ER   + +  + E +Q  H H + H D+ P+ I++   ++S
Sbjct: 82  FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY-QTRRS 140

Query: 62  FSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            ++K I+FG +   +P + F  L  +  Y A EV + +      D+WS+
Sbjct: 141 STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 9e-18
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +   + GEL+  I   G + E         IV  ++  H  G++H DL P+ IL     +
Sbjct: 87  LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 143

Query: 61  SFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              ++  DFG +    P  +    N  VG+  Y++ E+L  ++     D+W++
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 196

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 2e-17
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK-K 59
           ++L   GEL D +  K   TE  A   +K I+  V   H   + H DL P+ I+ +++  
Sbjct: 92  LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151

Query: 60  KSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
               +K IDFGL+       +F  + G+  ++A E++     G E D+WS+
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 2e-17
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 11/117 (9%)

Query: 1   MKLCEEGELVDRI-VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            + CE   L   + + +  +       + +   + +   H   ++H DL    I      
Sbjct: 82  TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 138

Query: 60  KSFSLKAIDFGLSVFF---RPREQFNELVGSLYYMALEVLKRN----YGPEVDVWSM 109
           +  ++K  DFGL+          QF +L GS+ +MA EV++      Y  + DV++ 
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 6e-17
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G L D +V +    E   AAV +  ++ ++  H + V+H D+    IL      
Sbjct: 96  MEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GM 151

Query: 61  SFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
             S+K  DFG        + + + +VG+ Y+MA EV+ R  YGP+VD+WS+
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.7 bits (175), Expect = 9e-17
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           + L   G+L   +   G ++E         I+  ++  H   V++ DL P  IL     +
Sbjct: 86  LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DE 142

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
              ++  D GL+  F  +++ +  VG+  YMA EVL++   Y    D +S+
Sbjct: 143 HGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 192

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 2e-16
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    G+L+  I +   +    A      I+  +Q  H  G+++ DL    IL     K
Sbjct: 82  MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DK 138

Query: 61  SFSLKAIDFGLSVFFRPRE-QFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              +K  DFG+       + + N   G+  Y+A E+L  + Y   VD WS 
Sbjct: 139 DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSF 189

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 2e-16
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 1   MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           ++ C  G +   ++  +   TE     V K  ++ +   H + ++H DL    ILF    
Sbjct: 88  IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT--- 144

Query: 60  KSFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVL------KRNYGPEVDVWSM 109
               +K  DFG+S    R  ++ +  +G+ Y+MA EV+       R Y  + DVWS+
Sbjct: 145 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 201

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 7e-16
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +     +L D I  +G   E +A +    ++E V+ CH  GV+H D+  + IL    + 
Sbjct: 89  ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR- 147

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
              LK IDFG     +    + +  G+  Y   E +   R +G    VWS+
Sbjct: 148 -GELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 1e-15
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
              CE             +T      VM+ ++  +   H++ ++H D+    +L     +
Sbjct: 96  FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---R 152

Query: 61  SFSLKAIDFGLSVFFRPRE-----QFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
              LK  DFGL+  F   +     ++   V +L+Y   E+L  +R+YGP +D+W  
Sbjct: 153 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA 208

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 4e-15
 Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L               ++ +    +   ++  ++  H    +H D+ P   L    KK
Sbjct: 82  MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 141

Query: 61  SFSLKAIDFGLSVFFRP--------REQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
              +  IDFGL+  +R           +   L G+  Y ++            D+ S+
Sbjct: 142 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL 199

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 4e-15
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +     +           T+      M  I++ +  CH  G+MH D+ P  ++  ++ +
Sbjct: 111 FEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 167

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK--RNYGPEVDVWS 108
              L+ ID+GL+ F+ P +++N  V S Y+   E+L   + Y   +D+WS
Sbjct: 168 --KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 215

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 4e-15
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 14/120 (11%)

Query: 1   MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHK-----HGVMHHDLNPK 51
           M+ CE G+L   I      + +  E     VM  +   ++ CH+     H V+H DL P 
Sbjct: 84  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 143

Query: 52  KILFVNKKKSFSLKAIDFGLSVFFRPREQF-NELVGSLYYMALEVLKRN-YGPEVDVWSM 109
            +    K    ++K  DFGL+        F    VG+ YYM+ E + R  Y  + D+WS+
Sbjct: 144 NVFLDGK---QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 200

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 2e-14
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M++ E G L   +    H  ++    ++  +   ++   +   +H DL  + +L V +  
Sbjct: 86  MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-- 143

Query: 61  SFSLKAIDFGLSVFFRPREQFNE----LVGSLYYMALEVLKRN-YGPEVDVWSM 109
               K  DFGLS   R  E + +        + + A E +    +  + DVWS 
Sbjct: 144 -HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 63.3 bits (153), Expect = 8e-14
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 11/120 (9%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           + L          +    ++ +  A   K ++  VQ  H+  +++ D+ P   L      
Sbjct: 80  IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS 139

Query: 61  SFS--LKAIDFGLSVFFR--------PREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
             +  +  +DFG+  F+R        P  +   L G+  YM++     R      D+ ++
Sbjct: 140 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEAL 199

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 61.3 bits (148), Expect = 4e-13
 Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+  +   L D +  +G  T + A  V+    + +   H++G++H D+ P  I+      
Sbjct: 90  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 149

Query: 61  SFSLKAIDFG-LSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              +       ++       Q   ++G+  Y++ E  +  +     DV+S+
Sbjct: 150 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 200

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 4e-13
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 4   CEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFS 63
              GEL   +  +  +TE  A      IV  ++  H   V++ D+  + ++     K   
Sbjct: 87  ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGH 143

Query: 64  LKAIDFGLSVFFR-PREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           +K  DFGL               G+  Y+A EVL+ N YG  VD W +
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 5e-13
 Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 1   MKLCEEGELVDRIVAKGH--YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
            +   +G LVD + ++G               + E ++    +  +H DL  + +L    
Sbjct: 80  TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--- 136

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +    K  DFGL+      +  +     + + A E L+ + +  + DVWS 
Sbjct: 137 SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSF 186

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 6e-13
 Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 1   MKLCEEG---ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN 57
           +    E           AK           M  +   +   H  G+ H D+ P+ +L   
Sbjct: 98  LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-- 155

Query: 58  KKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
              +  LK  DFG +      E     + S YY A E++    +Y   +DVWS 
Sbjct: 156 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 1e-12
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
               E    V         T     A M   ++ ++  H+H ++H DL P  +L     +
Sbjct: 79  FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DE 135

Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVLK--RNYGPEVDVWSM 109
           +  LK  DFGL+  F  P   +   V + +Y A E+L   R YG  VD+W++
Sbjct: 136 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-12
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  + +++   H +       +  I+  ++  H   V+H DL P  +L      +  LK 
Sbjct: 94  GADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKI 150

Query: 67  IDFGLSVFFRPRE----QFNELVGSLYYMALEVL--KRNYGPEVDVWS 108
            DFGL+    P         E V + +Y A E++   + Y   +D+WS
Sbjct: 151 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 5e-12
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M++   G L   +V K         A ++  +   ++   +   +H DL  + +L VN+ 
Sbjct: 87  MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR- 145

Query: 60  KSFSLKAIDFGLSVFFRPREQFNEL----VGSLYYMALEVLK-RNYGPEVDVWSM 109
                K  DFGLS      + +          L + A E +  R +    DVWS 
Sbjct: 146 --HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 198

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 7e-12
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 9/115 (7%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +L   G L+DR+    GH+     +     + E +        +H DL  + +L   + 
Sbjct: 89  TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR- 147

Query: 60  KSFSLKAIDFGLSVFFRPREQFNEL----VGSLYYMALEVLK-RNYGPEVDVWSM 109
               +K  DFGL       +    +         + A E LK R +    D W  
Sbjct: 148 --DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-11
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
            +   +G L+D +  +   +        +   I   +    +   +H DL    IL    
Sbjct: 90  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--- 146

Query: 59  KKSFSLKAIDFGLSVFFRPRE--QFNELVGSLYYMA-LEVLKRNYGPEVDVWSM 109
            ++   K  DFGL+      E          + + A    L   +  + DVWS 
Sbjct: 147 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 200

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.1 bits (137), Expect = 1e-11
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 6/110 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+    GE+   +   G ++E  A      IV   +  H   +++ DL P+ +L   +  
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-- 177

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
              ++  DFG +   + R     L G+   +A E++  + Y   VD W++
Sbjct: 178 -GYIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWAL 224

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-11
 Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 1   MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +    G L++ +   +  +  +    + K + E ++       +H DL  +  L  ++ 
Sbjct: 78  TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ- 136

Query: 60  KSFSLKAIDFGLSVFFRPRE--QFNELVGSLYYMALEVLKRN-YGPEVDVWS 108
               +K  DFGLS +    E          + +   EVL  + +  + D+W+
Sbjct: 137 --GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 2e-11
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 12  RIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGL 71
             V +          +M  ++  +   H H V+H DL P+ IL  +  +    K  DFGL
Sbjct: 106 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI---KLADFGL 162

Query: 72  SVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           +  +  +     +V +L+Y A EVL ++ Y   VD+WS+
Sbjct: 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 201

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.0 bits (134), Expect = 3e-11
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            +  ++       V +G      A + +  ++  +  CH   V+H DL P+ +L     +
Sbjct: 79  FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NR 135

Query: 61  SFSLKAIDFGLSVFFR-PREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
              LK  DFGL+  F  P  ++   + +L+Y A +VL   + Y   +D+WS+
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 7e-11
 Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKG--HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
            +  E G LVD +        T      +   I E +    +   +H DL    IL  + 
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT 145

Query: 59  KKSFSLKAIDFGLSVFFRPREQFNE--LVGSLYYMALEVLKRN-YGPEVDVWSM 109
               S K  DFGL+      E          + + A E +    +  + DVWS 
Sbjct: 146 ---LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.1 bits (132), Expect = 8e-11
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M   E GEL   +     +   VA      +   ++  H   +++ DL P+ IL     K
Sbjct: 83  MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---K 139

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
           +  +K  DFG + +    +    L G+  Y+A EV+  + Y   +D WS 
Sbjct: 140 NGHIKITDFGFAKYV--PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSF 187

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 9e-11
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 1   MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +L   G L+D +   K +   +        I + +       ++H DL  + +L    K
Sbjct: 89  TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---K 145

Query: 60  KSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWS 108
               +K  DFGL+      E+          + +MALE +  R Y  + DVWS
Sbjct: 146 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 198

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 1e-10
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           M+LC  GEL   +  +               +   +        +H D+  + +L     
Sbjct: 86  MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---S 142

Query: 60  KSFSLKAIDFGLSVFFRPREQF--NELVGSLYYMALEVLK-RNYGPEVDVWSM 109
            +  +K  DFGLS +      +  ++    + +MA E +  R +    DVW  
Sbjct: 143 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-10
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +  E G L D +  +   +       +   + E +    +  V+H DL  +  L     
Sbjct: 79  FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---G 135

Query: 60  KSFSLKAIDFGLSVFFRPRE--QFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           ++  +K  DFG++ F    +          + + + EV   + Y  + DVWS 
Sbjct: 136 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
             L  +             + +        +   +    +   +H DL  + IL     +
Sbjct: 106 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GE 162

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLKRN-YGPEVDVWSM 109
           ++  K  DFGLS       +       + +MA+E L  + Y    DVWS 
Sbjct: 163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 212

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 3e-10
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 11/116 (9%)

Query: 1   MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
            +  E G L   +    G +T      +++ I   ++       +H DL  + IL     
Sbjct: 106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---N 162

Query: 60  KSFSLKAIDFGLSVFFRPREQFNEL------VGSLYYMALEVLK-RNYGPEVDVWS 108
            +   K  DFGLS F                   + + A E ++ R +    DVWS
Sbjct: 163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 3e-10
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
            + C++          G     +  + +  +++ +  CH   V+H DL P+ +L     +
Sbjct: 80  FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NR 136

Query: 61  SFSLKAIDFGLSVFF-RPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
           +  LK  +FGL+  F  P   ++  V +L+Y   +VL   + Y   +D+WS 
Sbjct: 137 NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 4e-10
 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           +     GEL   +  +  +TE      +  IV  ++  HK G+++ D+  + IL  +   
Sbjct: 108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH 167

Query: 61  SFSLKAIDFGLSVFFRPR--EQFNELVGSLYYMALEVLK---RNYGPEVDVWSM 109
              +   DFGLS  F     E+  +  G++ YMA ++++     +   VD WS+
Sbjct: 168 ---VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 218

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 4e-10
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  + +++      E     ++  +++ ++  H  G++H DL P  +      +   LK 
Sbjct: 106 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKI 162

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
           +DFGL+       +    V + +Y A EV+     Y   VD+WS+
Sbjct: 163 LDFGLARQ--ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSV 205

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 6e-10
 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 22/128 (17%)

Query: 1   MKLCEEGELVDRIVAKG-------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKI 53
               E G L D +                 A+ +    +E+V    K  + H DL  K I
Sbjct: 80  SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139

Query: 54  LFVNKKKSFSLKAIDFGLSVFFRPREQ-----FNELVGSLYYMALEVLKRN-------YG 101
           L    KK+ +    D GL+V             N  VG+  YMA EVL  +         
Sbjct: 140 LV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 196

Query: 102 PEVDVWSM 109
              D+++M
Sbjct: 197 KRADIYAM 204

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 51.3 bits (122), Expect = 9e-10
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 18  HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP 77
                    V+  I+E V   +  G++H DL+   +L   +     +  IDF  SV    
Sbjct: 99  RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG----IWIIDFPQSVEVGE 154

Query: 78  REQFNELVGSLYYMALEVLKRNYGPEVDVWSML 110
                 L   +  + +    R Y  E D+ S +
Sbjct: 155 EGWREILERDVRNI-ITYFSRTYRTEKDINSAI 186

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.6 bits (120), Expect = 3e-09
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 20  TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE 79
           +      + + +   +    +   +H DL  +  L     ++  +K  DFGLS      +
Sbjct: 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSAD 194

Query: 80  QFNEL---VGSLYYMALEVLKRN-YGPEVDVWS 108
            +         + +M  E +  N Y  E DVW+
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWA 227

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (119), Expect = 4e-09
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 8/113 (7%)

Query: 1   MKLCEEGELVDRIVAKGHY--TERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNK 58
            +    G L+D +        +  V   +   I   ++   K   +H DL  +  L    
Sbjct: 92  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--- 148

Query: 59  KKSFSLKAIDFGLSVFFRPREQ--FNELVGSLYYMALEVLKRN-YGPEVDVWS 108
            ++  +K  DFGLS                 + + A E L  N +  + DVW+
Sbjct: 149 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 8e-09
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 8/98 (8%)

Query: 16  KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFF 75
            G ++      +++ I   ++       +H DL  + IL      +   K  DFGLS   
Sbjct: 104 DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 160

Query: 76  RPREQ----FNELVGSLYYMALEVLK-RNYGPEVDVWS 108
               +     +     + + A E +  R +    DVWS
Sbjct: 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 198

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 2e-08
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 6/105 (5%)

Query: 8   ELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAI 67
           +      A       +  + +  +++ +  CH H V+H DL P+ +L        ++K  
Sbjct: 88  KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLA 144

Query: 68  DFGLSVFF-RPREQFNELVGSLYYMALEVLKRN--YGPEVDVWSM 109
           DFGL+  F  P   +   V +L+Y A E+L     Y   VD+WS+
Sbjct: 145 DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 3e-08
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 7   GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKA 66
           G  ++ IV     T+     ++  I+  ++  H   ++H DL P  +      +   LK 
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKI 162

Query: 67  IDFGLSVFFRPREQFNELVGSLYYMALEVL--KRNYGPEVDVWSM 109
           +DFGL+       +    V + +Y A E++    +Y   VD+WS+
Sbjct: 163 LDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 5e-08
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 30/136 (22%)

Query: 1   MKLCEEGELVDRIVAKGH-----------------------YTERVAAAVMKTIVEVVQV 37
            + C  G+L++ + +K                          T          + + ++ 
Sbjct: 120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 179

Query: 38  CHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALE 94
                 +H DL  + +L         +K  DFGL+        +         + +MA E
Sbjct: 180 LEFKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 236

Query: 95  VLKRN-YGPEVDVWSM 109
            L    Y  + DVWS 
Sbjct: 237 SLFEGIYTIKSDVWSY 252

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-07
 Identities = 16/125 (12%), Positives = 36/125 (28%), Gaps = 17/125 (13%)

Query: 1   MKLCEEGELVDRI----------------VAKGHYTERVAAAVMKTIVEVVQVCHKHGVM 44
           ++   +G L + +                  +   + +   +    +   ++       +
Sbjct: 98  VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI 157

Query: 45  HHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPE 103
           H DL  + +L                        ++       + +MA E L  R Y  +
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 217

Query: 104 VDVWS 108
            DVWS
Sbjct: 218 SDVWS 222

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 1e-07
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 1   MKLCEEGELVDRIVAKGH-YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK 59
           +   + G+L + I  + H  T +        + + ++       +H DL  +  +     
Sbjct: 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---D 164

Query: 60  KSFSLKAIDFGLSVFFRPREQFNEL-----VGSLYYMALEVLK-RNYGPEVDVWSM 109
           + F++K  DFGL+     +E  +          + +MALE L+ + +  + DVWS 
Sbjct: 165 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 2e-07
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 1   MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKK 60
           M+L +          +        + ++  ++  ++  H  G++H DL P  I     K 
Sbjct: 101 MELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VVKS 154

Query: 61  SFSLKAIDFGLSVFFRPREQFNELVGSLYYMALE-VLKRNYGPEVDVWSM 109
             +LK +DFGL+            V + YY A E +L   Y   VD+WS+
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 4e-06
 Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 25/131 (19%)

Query: 1   MKLCEEGELVDRIVAKGH------------------YTERVAAAVMKTIVEVVQVCHKHG 42
            + C  G+L++ +  K                           +    + + +       
Sbjct: 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 165

Query: 43  VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKRN 99
            +H DL  + IL          K  DFGL+   +    +         + +MA E +   
Sbjct: 166 CIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 222

Query: 100 Y-GPEVDVWSM 109
               E DVWS 
Sbjct: 223 VYTFESDVWSY 233

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 1e-05
 Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 11  DRIVAKGHYTERVAAAVMKTIVEVVQ-VCHKHGVMHHDLNPKKILF-VNKKKSFSLKAID 68
            +              + K ++  +  +  + G++H D+ P+ +L  +       ++   
Sbjct: 114 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 173

Query: 69  FGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSM 109
             L       E +   + +  Y + EVL    +G   D+WS 
Sbjct: 174 ADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWST 215

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-05
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 17/123 (13%)

Query: 1   MKLCEEGELVDRIVAKGH----------YTERVAAAVMKTIVEVVQVCHKHGVMHHDLNP 50
           M+L   G+L   + +              +      +   I + +   + +  +H DL  
Sbjct: 102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA 161

Query: 51  KKILFVNKKKSFSLKAIDFGLSVFFRPREQF---NELVGSLYYMALEVLKRN-YGPEVDV 106
           +  +       F++K  DFG++      + +    + +  + +M+ E LK   +    DV
Sbjct: 162 RNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 218

Query: 107 WSM 109
           WS 
Sbjct: 219 WSF 221

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	110
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.98
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.98
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.85
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.71
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.89
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.89
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.64
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.38
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	92.64
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	87.56

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-35  Score=181.69  Aligned_cols=110  Identities=37%  Similarity=0.633  Sum_probs=85.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||+||+|.+++.+.+.+++.++..++.|++.|+.|||+++++||||||+||++...+....+|++|||++........
T Consensus        86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             EeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence            79999999999999888999999999999999999999999999999999999996544456799999999987655444


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlG  196 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIG  196 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHH
T ss_pred             eeeeeeCccccCcHHHcCCCCCcHHHhhhhh
Confidence            456789999999999985 589999999997

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-35  Score=176.23  Aligned_cols=106  Identities=25%  Similarity=0.475  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++....... 
T Consensus        85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~---~~~~kl~DFG~a~~~~~~~-  160 (263)
T d2j4za1          85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-  160 (263)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEECCCCSCSCCCCCC-
T ss_pred             EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecC---CCCEeecccceeeecCCCc-
Confidence            799999999999998889999999999999999999999999999999999999954   3459999999987654432 


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....||+.|+|||++.+ .|+.++|+||||
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlG  191 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG  191 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred             ccccCCCCcccCHHHHcCCCCCchhhhhhHh
Confidence            344679999999999985 489999999997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-34  Score=179.19  Aligned_cols=107  Identities=26%  Similarity=0.392  Sum_probs=95.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc-c
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR-E   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~-~   79 (110)
                      ||||++|+|.+++.+.+.+++..++.++.|++.|+.|+|+++|+||||||+||+++.+   +.+|++|||+++..... .
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~---g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCC---CCEEEeecccccccccCCc
Confidence            7999999999999998999999999999999999999999999999999999999543   45999999999876443 3


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlG  192 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG  192 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHH
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchh
Confidence            3445789999999999985 599999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=180.37  Aligned_cols=110  Identities=33%  Similarity=0.550  Sum_probs=97.2

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||+||+|.+++.+.  ..+++.++..++.|++.|+.|||+++|+||||||+||+++.......+|++|||++......
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCC
Confidence            7999999999999764  46999999999999999999999999999999999999976555567999999999877665


Q ss_pred             cccccccccccccccccccc-cCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .......||+.|+|||++.+ .|+.++|+||+|
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlG  200 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG  200 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHH
T ss_pred             CccccccCCcccCCcHHHcCCCCCHHHHHHhhc
Confidence            55556789999999999985 499999999997

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=178.08  Aligned_cols=107  Identities=36%  Similarity=0.589  Sum_probs=92.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.+.+.+++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++....... 
T Consensus        82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~---~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT---TCCEEECCCTTCEECEETTE
T ss_pred             EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECC---CCCEEEccchhheeeccCCc
Confidence            799999999999988888999999999999999999999999999999999999954   3459999999998764322 


Q ss_pred             --ccccccccccccccccccc-cC-CCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-NY-GPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~~-~~~~d~wslg  110 (110)
                        .....+||+.|+|||++.+ .+ +.++|+||+|
T Consensus       159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlG  193 (271)
T d1nvra_         159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG  193 (271)
T ss_dssp             ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHH
T ss_pred             cccccceeeCcCccCHhHhcCCCCCCCceeeeHhH
Confidence              2344689999999999974 34 5789999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-34  Score=173.40  Aligned_cols=107  Identities=23%  Similarity=0.339  Sum_probs=93.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHG--VMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++.+...+++..+..++.|++.|+.|||+++  |+||||||+||+++.  ....+|++|||++......
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~--~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC--CCCCEEEeecCcceeccCC
Confidence            799999999999988889999999999999999999999998  999999999999952  2345999999998754332


Q ss_pred             cccccccccccccccccccccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLKRNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~~~~~~~~d~wslg  110 (110)
                       ......||+.|+|||++.+.|+.++|+||+|
T Consensus       169 -~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlG  199 (270)
T d1t4ha_         169 -FAKAVIGTPEFMAPEMYEEKYDESVDVYAFG  199 (270)
T ss_dssp             -SBEESCSSCCCCCGGGGGTCCCTHHHHHHHH
T ss_pred             -ccCCcccCccccCHHHhCCCCCCcCchhhHH
Confidence             2345689999999999988899999999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-34  Score=175.53  Aligned_cols=107  Identities=26%  Similarity=0.529  Sum_probs=91.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++...+.+++..+..++.|++.|+.|+|+++|+||||||+||+++.   ...+|++|||++..+.... 
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~---~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE---DMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---TSCEEECCCTTCEECC----
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCC---CceEEecccccceecccCCc
Confidence            799999999999998899999999999999999999999999999999999999954   3459999999998764332 


Q ss_pred             --ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 --QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 --~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                        .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlG  197 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALG  197 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHH
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhh
Confidence              2234579999999999985 589999999997

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-34  Score=173.84  Aligned_cols=106  Identities=33%  Similarity=0.580  Sum_probs=92.0

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++.+ +.+++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++..+.... 
T Consensus        96 mEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~---~~~vkl~DFG~a~~~~~~~~  171 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS  171 (293)
T ss_dssp             EECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECCSTTC
T ss_pred             EEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC---CCcEeeccchhheeeccccc
Confidence            799999999997755 57999999999999999999999999999999999999954   3459999999998765433 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  203 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG  203 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHH
T ss_pred             cccccccCCCccChhhhcCCCCCchhceehHh
Confidence            3345679999999999985 589999999997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.3e-34  Score=178.24  Aligned_cols=106  Identities=28%  Similarity=0.459  Sum_probs=91.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+ ++|+||||||+||+++.   ...+|++|||++...... 
T Consensus        83 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~---~~~vkl~DFGla~~~~~~-  158 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDS-  158 (322)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT---TCCEEECCCCCCHHHHHH-
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECC---CCCEEEeeCCCccccCCC-
Confidence            7999999999999888899999999999999999999997 59999999999999953   445999999998765332 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlG  190 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG  190 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHHHH
T ss_pred             ccccccCCccccCchHHcCCCCCcHHHHHHHH
Confidence            2345689999999999985 599999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.98  E-value=1.3e-33  Score=176.40  Aligned_cols=109  Identities=28%  Similarity=0.506  Sum_probs=95.3

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+ .+.+++..+..++.||+.||.|||+++++||||||+||++..+. ...+||+|||++..+....
T Consensus       102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~-~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT-SCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCC-CCeEEEeecchheeccccc
Confidence            799999999999854 46799999999999999999999999999999999999996422 3469999999998876655


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......||+.|+|||++.+ .|+.++|+||+|
T Consensus       181 ~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlG  212 (350)
T d1koaa2         181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG  212 (350)
T ss_dssp             CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHH
T ss_pred             ccceecCcccccCHHHHcCCCCChhHhhhhhh
Confidence            5556789999999999985 488999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=4.5e-33  Score=174.73  Aligned_cols=106  Identities=26%  Similarity=0.364  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.+...+++..+..++.|++.|+.|||+++++||||||+||+++.   ...+|++|||++..+.... 
T Consensus        86 mE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~---~g~iKl~DFGla~~~~~~~-  161 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLACDFSKKK-  161 (364)
T ss_dssp             ECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS---SSCEEECCCTTCEECSSSC-
T ss_pred             EEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcC---CCcEEEeeeceeeecCCCc-
Confidence            799999999999998899999999999999999999999999999999999999954   3459999999998765432 


Q ss_pred             ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      .....||+.|+|||++. + .|+.++|+||||
T Consensus       162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlG  193 (364)
T d1omwa3         162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLG  193 (364)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHH
T ss_pred             ccccccccccchhHHhhcCCCCCcccchhHHH
Confidence            34467999999999986 4 389999999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-33  Score=170.55  Aligned_cols=110  Identities=30%  Similarity=0.514  Sum_probs=97.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC-CCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK-KSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~-~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+.+.+++..+..++.|++.|+.|||+++++||||+|+||+++.++ ....+|++|||++.......
T Consensus        92 ~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~  171 (293)
T d1jksa_          92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  171 (293)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred             EEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence            79999999999998888999999999999999999999999999999999999996544 23469999999998876555


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|+|||++.+ .++.++|+||+|
T Consensus       172 ~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlG  203 (293)
T d1jksa_         172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG  203 (293)
T ss_dssp             BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccCCCCcccCHHHHcCCCCCCcccchhhh
Confidence            5556688999999999985 489999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=7.6e-33  Score=170.98  Aligned_cols=105  Identities=26%  Similarity=0.426  Sum_probs=93.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||+||++.+.+.....+++..+..++.|++.|+.|+|+++|+||||||+||+++.   ...+||+|||++......  
T Consensus        83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~---~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK---NGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT---TSCEEECCCSSCEECSSC--
T ss_pred             eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcC---CCCEEEecCccceEeccc--
Confidence            799999999999999999999999999999999999999999999999999999954   446999999999876543  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ....+||+.|+|||++.+ .|+.++|+||+|
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlG  188 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFG  188 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHH
T ss_pred             cccccCcccccCHHHHcCCCCCchhhccccc
Confidence            234689999999999985 489999999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-33  Score=170.34  Aligned_cols=107  Identities=23%  Similarity=0.429  Sum_probs=87.7

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... +++++..+..++.|++.|+.|||+++|+||||||+||+++.+   ..+|++|||++.......
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~---~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT---SSEEECCCCCSCC-----
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC---CCEEEccccceeeccccC
Confidence            7999999999999754 679999999999999999999999999999999999999643   459999999987654322


Q ss_pred             ---cccccccccccccccccc----ccCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                         ......||+.|+|||++.    +.|+.++|+||||
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~G  196 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG  196 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHH
T ss_pred             CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhH
Confidence               223457899999999985    2378899999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.1e-32  Score=172.15  Aligned_cols=105  Identities=24%  Similarity=0.382  Sum_probs=93.5

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|+|.+++.+.+.+++.++..++.||+.||.|||+++|+||||||+||+++.   ...+||+|||+++.....  
T Consensus       120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~---~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECSSC--
T ss_pred             cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCC---CCCEEeeeceeeeecccc--
Confidence            689999999999988889999999999999999999999999999999999999954   345999999999876543  


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....||+.|+|||++.+ .|+.++|+||||
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlG  225 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYNKAVDWWALG  225 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccCccccCCHHHHcCCCCCccccccchh
Confidence            234679999999999985 489999999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-33  Score=170.47  Aligned_cols=107  Identities=28%  Similarity=0.488  Sum_probs=90.8

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.+ ...+++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++.......
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~---~~~~Kl~DFG~a~~~~~~~  164 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTI  164 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TSCEEECCCTTCEECHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECC---CCCEEEEechhhhccCCCc
Confidence            799999999998765 467999999999999999999999999999999999999954   3459999999987654322


Q ss_pred             -cccccccccccccccccc------ccCCCccceeecC
Q 033837           80 -QFNELVGSLYYMALEVLK------RNYGPEVDVWSML  110 (110)
Q Consensus        80 -~~~~~~~~~~~~~pe~~~------~~~~~~~d~wslg  110 (110)
                       ......||+.|+|||++.      ..|+.++|+||+|
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlG  202 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  202 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHH
T ss_pred             ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHH
Confidence             233467899999999873      2378899999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=6.8e-33  Score=173.26  Aligned_cols=109  Identities=30%  Similarity=0.497  Sum_probs=94.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+.+... .++++.++..++.||+.|+.|||+++|+||||||+||+++.. ....+||+|||++..+....
T Consensus       105 mE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc-CCCeEEEeecccceecCCCC
Confidence            7999999999987654 579999999999999999999999999999999999999532 23469999999998876655


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......|++.|+|||++.+ .|+.++|+||+|
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  215 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIG  215 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHH
T ss_pred             ceeeccCcccccCHHHHcCCCCCCccchHHHH
Confidence            5556788999999999985 489999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=8.4e-33  Score=170.35  Aligned_cols=104  Identities=32%  Similarity=0.446  Sum_probs=90.8

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.+|++..++...+++++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++......  
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~---~~~~Kl~DFG~a~~~~~~--  168 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASIMAPA--  168 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET---TTEEEECCCTTCBSSSSB--
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECC---CCCEEEeecccccccCCC--
Confidence            799999999888778889999999999999999999999999999999999999964   446999999998765432  


Q ss_pred             ccccccccccccccccc----ccCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLK----RNYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~----~~~~~~~d~wslg  110 (110)
                       ....||+.|+|||++.    +.|+.++|+||||
T Consensus       169 -~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlG  201 (309)
T d1u5ra_         169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  201 (309)
T ss_dssp             -CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHH
T ss_pred             -CccccCccccCHHHHhccCCCCcCchhhhhhHH
Confidence             3457899999999985    2488899999997

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.3e-33  Score=169.39  Aligned_cols=107  Identities=30%  Similarity=0.596  Sum_probs=82.2

Q ss_pred             CCCcCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeecCCCCCceEEEeCCCCceEEEeeccc
Q 033837            1 MKLCEEGELVDRIVA----KGHYTERVAAAVMKTIVEVVQVCHKHG-----VMHHDLNPKKILFVNKKKSFSLKAIDFGL   71 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~~l~~~~il~~~~~~~~~~~l~d~g~   71 (110)
                      ||||++|+|.+++.+    .+.+++..+..++.|++.|+.|||+++     |+||||||+||+++.   ...+|++|||+
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~---~~~vkl~DFG~  160 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG---KQNVKLGDFGL  160 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT---TSCEEECCHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCC---CCcEEEeeccc
Confidence            799999999998853    467999999999999999999999976     999999999999954   34599999999


Q ss_pred             ceecCCcc-ccccccccccccccccccc-cCCCccceeecC
Q 033837           72 SVFFRPRE-QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        72 ~~~~~~~~-~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      +..+.... ......||+.|+|||++.+ .|+.++|+||||
T Consensus       161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG  201 (269)
T d2java1         161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG  201 (269)
T ss_dssp             HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHH
T ss_pred             eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhC
Confidence            98765433 2345688999999999974 589999999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-32  Score=169.19  Aligned_cols=107  Identities=26%  Similarity=0.360  Sum_probs=94.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||++|+|.+++...+.+++.++..++.|++.|+.|||+++++|||++|+||+++.   ...+|++|||.+....... 
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~---~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK---DGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---TSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecC---CCceeccccchhhhcccccc
Confidence            799999999999998899999999999999999999999999999999999999953   4459999999987654332 


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......||+.|+|||++.+ .|+.++|+||+|
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  190 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG  190 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhh
Confidence            2344688999999999985 589999999997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-32  Score=169.82  Aligned_cols=107  Identities=21%  Similarity=0.276  Sum_probs=89.9

Q ss_pred             CCCcCCCCHHHHHHhC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEe
Q 033837            1 MKLCEEGELVDRIVAK-----------------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVN   57 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~   57 (110)
                      ||||++|+|.+++.+.                       ..+++..+..++.|++.|+.|||+++|+||||||+||+++.
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~  199 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  199 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccccc
Confidence            7999999999999754                       24788999999999999999999999999999999999954


Q ss_pred             CCCCceEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           58 KKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        58 ~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                         ...+|++|||+++.......   .....||+.|+|||++. +.|+.++|+||||
T Consensus       200 ---~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~G  253 (325)
T d1rjba_         200 ---GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG  253 (325)
T ss_dssp             ---TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ---CCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchh
Confidence               34699999999976543322   22356789999999987 5689999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=168.77  Aligned_cols=107  Identities=23%  Similarity=0.317  Sum_probs=84.8

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      ||||++|+|.+++...                ..+++.++..++.|++.|+.|||+++|+||||||+||+++   ....+
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~---~~~~~  173 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV  173 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCE
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC---CCCcE
Confidence            7999999999999643                2488999999999999999999999999999999999995   34569


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ||+|||+++.......   .....||+.|+|||.+. +.++.++|+||||
T Consensus       174 Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~G  223 (299)
T d1ywna1         174 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  223 (299)
T ss_dssp             EECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             EEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehH
Confidence            9999999976543322   23357899999999998 4589999999997

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=167.71  Aligned_cols=107  Identities=22%  Similarity=0.366  Sum_probs=91.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++.+...+++.++..++.|++.|+.|||+++++||||||+||+++.+   ..+|++|||+++.......
T Consensus        86 mE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~---~~~kl~DFGla~~~~~~~~  162 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN  162 (277)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCS
T ss_pred             EEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccccc---Ccccccchhhhhhcccccc
Confidence            7999999999999988899999999999999999999999999999999999999654   4589999999987643322


Q ss_pred             ----ccccccccccccccccc-ccCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                          .....||+.|+|||.+. +.++.++|+||||
T Consensus       163 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~G  197 (277)
T d1xbba_         163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG  197 (277)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             ccccccccCCCceecCchhhcCCCCCchhhhccch
Confidence                12246788999999987 4588999999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=6.5e-32  Score=164.22  Aligned_cols=107  Identities=35%  Similarity=0.655  Sum_probs=94.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++|+|.+++...+++++.++..++.||+.|+.|||+++++||||+|+||+++   ....+|++|||++........
T Consensus        89 mE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~~~~~~~~  165 (277)
T d1phka_          89 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEK  165 (277)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECCTTCC
T ss_pred             EEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc---CCCCeEEccchheeEccCCCc
Confidence            79999999999998888999999999999999999999999999999999999994   445599999999988765544


Q ss_pred             cccccccccccccccccc-------cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-------NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-------~~~~~~d~wslg  110 (110)
                      .....||+.|++||.+.+       .++.++|+||+|
T Consensus       166 ~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslG  202 (277)
T d1phka_         166 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG  202 (277)
T ss_dssp             BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred             eeeeeccCCCCCHHHhhccccccCCCCCchheEcccc
Confidence            455688999999999852       257789999987

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.9e-32  Score=167.28  Aligned_cols=109  Identities=25%  Similarity=0.466  Sum_probs=94.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||+||+|.+++... .++++.++..++.|++.|+.|||+++|+||||+|+||+++.++ ...++++|||++.......
T Consensus        80 mE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~-~~~ikl~DFG~~~~~~~~~  158 (321)
T d1tkia_          80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTC
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCC-ceEEEEcccchhhccccCC
Confidence            7999999999999765 4799999999999999999999999999999999999996432 3468999999998776555


Q ss_pred             ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ......+++.|++||...+ .|+.++|+||+|
T Consensus       159 ~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlG  190 (321)
T d1tkia_         159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG  190 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHH
T ss_pred             cccccccccccccchhccCCCCCchhhcccHH
Confidence            4555678999999999874 489999999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=6.9e-32  Score=164.83  Aligned_cols=107  Identities=21%  Similarity=0.291  Sum_probs=91.2

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++.+.  ..+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+||+|||+++.....
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~---~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEECCCCCTTTCCSS
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC---CCcEEEccccceeecCCC
Confidence            7999999999999764  56899999999999999999999999999999999999954   456999999999876443


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.|+.++|+||||
T Consensus       169 ~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~G  203 (287)
T d1opja_         169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG  203 (287)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHH
T ss_pred             CceeeccccccccccChHHHcCCCCCchhhhhhHH
Confidence            22  22345788899999987 5699999999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.9e-32  Score=163.08  Aligned_cols=107  Identities=21%  Similarity=0.338  Sum_probs=82.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++..+..++.|++.|+.|+|+++++||||||+||+++.   ...+||+|||+++......
T Consensus        79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~---~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---NQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG---GGCEEECSCC---------
T ss_pred             EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecC---CCCeEecccchheeccCCC
Confidence            7999999999998754 66889999999999999999999999999999999999954   4569999999987764432


Q ss_pred             c--cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .  .....||+.|+|||++.+ .|+.++|+||||
T Consensus       156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~G  189 (263)
T d1sm2a_         156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG  189 (263)
T ss_dssp             ---------CTTSCCHHHHTTCCCCHHHHHHHHH
T ss_pred             ceeecceecCcccCChHHhcCCCCCchhhhcchH
Confidence            2  223567889999999984 599999999997

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.2e-32  Score=165.20  Aligned_cols=107  Identities=23%  Similarity=0.393  Sum_probs=91.5

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++.. +..+++.++..++.|++.|+.|||+++++||||||+||+++.+   ..+|++|||+++.+....
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADD  163 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccC---Cceeeccchhhhcccccc
Confidence            799999999999865 4679999999999999999999999999999999999999654   459999999998765432


Q ss_pred             cc----cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF----NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~----~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..    ....|++.|+|||++. +.++.++|+||||
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~G  199 (285)
T d1u59a_         164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG  199 (285)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             cccccccccccCccccChHHHhCCCCCccchhhcch
Confidence            21    2346788899999987 5589999999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=7e-32  Score=165.59  Aligned_cols=107  Identities=23%  Similarity=0.341  Sum_probs=81.9

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... +.+++.++..++.|++.|+.|||+++++||||||+||+++   ....+||+|||+++.+....
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC----------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC---CCCcEEECCcccceEccCCC
Confidence            7999999999988764 6799999999999999999999999999999999999995   34569999999998764322


Q ss_pred             cc------cccccccccccccccc-ccCCCccceeecC
Q 033837           80 QF------NELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~------~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..      ....+++.|+|||.+. +.|+.++|+||||
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~G  220 (299)
T d1jpaa_         183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG  220 (299)
T ss_dssp             -------------CGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             CcceeeecccccCCccccCHHHHhcCCCCcccccccch
Confidence            11      1235678899999987 4589999999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.2e-31  Score=162.92  Aligned_cols=107  Identities=22%  Similarity=0.438  Sum_probs=86.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||+||+|.+++...+++++.++..++.|++.|+.|+|+++++||||||+||+++.++   ..+++|||.+....... 
T Consensus        90 mE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~---~~~l~d~~~~~~~~~~~~  166 (277)
T d1o6ya_          90 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGN  166 (277)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTS---CEEECCCTTCEECC----
T ss_pred             EECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccc---cceeehhhhhhhhccccc
Confidence            79999999999998889999999999999999999999999999999999999996543   48999999876553322 


Q ss_pred             ---ccccccccccccccccccc-cCCCccceeecC
Q 033837           80 ---QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ---~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                         ......||+.|+|||++.+ .|+.++|+||+|
T Consensus       167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlG  201 (277)
T d1o6ya_         167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG  201 (277)
T ss_dssp             ------------TTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cccccccccCcccccCHHHHcCCCCCcceecccch
Confidence               2234578999999999985 589999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-31  Score=162.84  Aligned_cols=107  Identities=24%  Similarity=0.318  Sum_probs=91.0

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|+|.+++...  .++++.++..++.|++.|+.|||+++++||||||+||+++   ....+||+|||+++.....
T Consensus        86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~---~~~~~Kl~DFGla~~~~~~  162 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDN  162 (272)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECSSS
T ss_pred             EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee---cccceeeccccceEEccCC
Confidence            7999999999977533  4699999999999999999999999999999999999995   3456999999999877543


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||++. +.++.++|+||||
T Consensus       163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~G  197 (272)
T d1qpca_         163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG  197 (272)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHH
T ss_pred             ccccccccCCcccccChHHHhCCCCCchhhhhhhH
Confidence            32  23356788999999987 5589999999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-31  Score=162.84  Aligned_cols=107  Identities=27%  Similarity=0.352  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||.++++.........+++..+..++.|++.|+.|||+++++||||||+||+++.   ...+|++|||.+....... 
T Consensus        79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~---~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE---NGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECCCGGGSTTTSCCC
T ss_pred             hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecC---CCccccccCccccccCCCcc
Confidence            789998777766666678999999999999999999999999999999999999953   4459999999987664432 


Q ss_pred             cccccccccccccccccc-c-cCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                      .....+||+.|+|||++. + .|+.++|+||+|
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG  188 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVG  188 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHH
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcc
Confidence            234467899999999886 3 478999999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-30  Score=158.91  Aligned_cols=107  Identities=22%  Similarity=0.343  Sum_probs=84.8

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||.+|++.+.+... +.+++.++..++.|++.|+.|||+++|+||||||+||+++.   ...+||+|||+++......
T Consensus        88 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~---~~~~Kl~DFGla~~~~~~~  164 (283)
T d1mqba_          88 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDP  164 (283)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECCCCC--------
T ss_pred             EEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECC---CCeEEEcccchhhcccCCC
Confidence            6899999999988755 67999999999999999999999999999999999999953   4569999999998764332


Q ss_pred             c----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    .....||+.|+|||.+. +.++.++|+||||
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~G  200 (283)
T d1mqba_         165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG  200 (283)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             ccceEeccCCCCccccCHHHHccCCCCCcccccccH
Confidence            1    12245788999999987 4589999999997

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.9e-30  Score=158.49  Aligned_cols=107  Identities=26%  Similarity=0.403  Sum_probs=89.8

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||.++++...... ...+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||.+.......
T Consensus        94 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~---~~~~kl~dfg~~~~~~~~~  170 (305)
T d1blxa_          94 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM  170 (305)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECSCCSCCCCCGGG
T ss_pred             EEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcC---CCCeeecchhhhhhhcccc
Confidence            588888766554443 367999999999999999999999999999999999999953   4459999999887665555


Q ss_pred             cccccccccccccccccc-ccCCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ......||+.|+|||++. ..|+.++|+||+|
T Consensus       171 ~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG  202 (305)
T d1blxa_         171 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG  202 (305)
T ss_dssp             GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cCCCcccChhhcCcchhcCCCCChhehhhchH
Confidence            556678999999999987 4599999999997

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-30  Score=157.83  Aligned_cols=107  Identities=28%  Similarity=0.496  Sum_probs=90.1

Q ss_pred             CCCcCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEE-GELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+ +++.+++.+...+++.++..++.|++.|+.|||+++++||||||+||+++.+  ...+|++|||++...... 
T Consensus        88 ~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~--~~~vkl~DFG~a~~~~~~-  164 (273)
T d1xwsa_          88 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKDT-  164 (273)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCSS-
T ss_pred             EEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC--CCeEEECccccceecccc-
Confidence            678875 6888888888899999999999999999999999999999999999999633  346999999998765433 


Q ss_pred             ccccccccccccccccccc-c-CCCccceeecC
Q 033837           80 QFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        80 ~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                      ......||+.|+|||++.+ . ++.++|+||+|
T Consensus       165 ~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlG  197 (273)
T d1xwsa_         165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG  197 (273)
T ss_dssp             CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHH
T ss_pred             cccccccCCCcCCHHHHcCCCCCCcccccccce
Confidence            2345679999999999874 3 46779999997

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-30  Score=157.49  Aligned_cols=107  Identities=21%  Similarity=0.307  Sum_probs=81.4

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|++.+++.. ...+++..+..++.|++.|+.|+|+++++||||||+||+++.+   ..+|++|||+++.+....
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~---~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC-----------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC---CcEEEccchhheeccCCc
Confidence            799999999998765 4679999999999999999999999999999999999999654   359999999988764332


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+|+.|+|||.+. +.|+.++|+||||
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlG  196 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFG  196 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHH
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccch
Confidence            2  22346788999999997 5689999999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-30  Score=156.64  Aligned_cols=107  Identities=20%  Similarity=0.243  Sum_probs=85.9

Q ss_pred             CCCcCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVA--KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||++|++..++..  .+.+++.++..++.||+.|+.|||+++++||||||+||+++.   ...+||+|||+++.....
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~---~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---NLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEECCCCTTC-----
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECC---CCcEEEcccchhhhccCC
Confidence            799999999998854  367999999999999999999999999999999999999953   456999999998765433


Q ss_pred             cc--ccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQ--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      ..  .....+++.|+|||.+. +.++.++|+||||
T Consensus       167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~G  201 (285)
T d1fmka3         167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  201 (285)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             CceeeccccccccccChHHHhCCCCCcHHhhhcch
Confidence            22  22346788999999997 5689999999997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.9e-30  Score=158.01  Aligned_cols=107  Identities=23%  Similarity=0.321  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+.+|+|.+.+... ..+++..+..++.|++.|+.|||+++++||||||+||+++.+   ..+|++|||++.......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET---TEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCC---CCeEeeccccceeccccc
Confidence            5788999999988764 679999999999999999999999999999999999999654   359999999988764332


Q ss_pred             c---ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .   .....||+.|+|||.+. +.|+.++|+||||
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~G  200 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG  200 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHH
Confidence            2   12346789999999987 5689999999997

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.8e-30  Score=157.59  Aligned_cols=107  Identities=21%  Similarity=0.287  Sum_probs=89.4

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      ||||++|+|.+++.+.                ..+++.++..++.|++.|+.|+|+++++||||+|+||+++.   ...+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~---~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG---GGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcC---CCce
Confidence            6999999999998643                56999999999999999999999999999999999999953   4569


Q ss_pred             EEeecccceecCCcccccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      |++|||+++............++..|++||.+. +.|+.++|+||||
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfG  213 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG  213 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHH
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhH
Confidence            999999987654433333456788999999997 4589999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=8.1e-30  Score=156.21  Aligned_cols=109  Identities=20%  Similarity=0.303  Sum_probs=89.3

Q ss_pred             CCCcCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIV-AKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||. +++.+.+. ....+++..+..++.|++.|+.|+|+++|+||||||+||++...+....++++|||+++.+....
T Consensus        82 me~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          82 MELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             EECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             EEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence            67885 56666665 45689999999999999999999999999999999999998654445579999999998764322


Q ss_pred             c--------cccccccccccccccccc-cCCCccceeecC
Q 033837           80 Q--------FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        80 ~--------~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .        .....||+.|+|||.+.+ .++.++|+||||
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  200 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG  200 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHH
T ss_pred             cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecC
Confidence            1        123578999999999985 489999999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-29  Score=154.79  Aligned_cols=107  Identities=21%  Similarity=0.306  Sum_probs=90.9

Q ss_pred             CCCcCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceE
Q 033837            1 MKLCEEGELVDRIVAK----------------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSL   64 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~   64 (110)
                      ||||++|+|.+++...                ..+++.++..++.|++.|+.|+|+++++||||||+||+++.   ...+
T Consensus        98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~---~~~~  174 (299)
T d1fgka_          98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE---DNVM  174 (299)
T ss_dssp             ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT---TCCE
T ss_pred             EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC---CCCe
Confidence            7999999999999644                35899999999999999999999999999999999999954   4459


Q ss_pred             EEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           65 KAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        65 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      |++|||.+........   .....+++.|+|||.+. +.|+.++|+||||
T Consensus       175 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~G  224 (299)
T d1fgka_         175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  224 (299)
T ss_dssp             EECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             EeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhH
Confidence            9999999887644322   23356788999999987 5699999999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.95  E-value=2.2e-29  Score=155.90  Aligned_cols=105  Identities=26%  Similarity=0.530  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||++++|.+..   ..+++..++.++.||+.||.|||+++|+||||||+||+++.++  ..++++|||.+........
T Consensus       111 ~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~--~~vkl~DFG~a~~~~~~~~  185 (328)
T d3bqca1         111 FEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQE  185 (328)
T ss_dssp             EECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCGGGCEECCTTCC
T ss_pred             EeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC--CeeeecccccceeccCCCc
Confidence            6899999987753   4699999999999999999999999999999999999996433  3589999999987765555


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+|+.|+|||.+.+  .++.++|+||+|
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  217 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLG  217 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             ccccccCccccCcccccCCCCCCcccchhhhh
Confidence            556678999999999863  379999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-29  Score=152.77  Aligned_cols=107  Identities=19%  Similarity=0.308  Sum_probs=90.6

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      |||+++|++.+++.. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.   ...+|++|||++.......
T Consensus        78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~---~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT---TCCEEECCCSSCCBCSSSS
T ss_pred             EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC---CCcEEECcchhheeccCCC
Confidence            699999999998764 467999999999999999999999999999999999999953   4469999999987654332


Q ss_pred             c--ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q--FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~--~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  .....+++.|+|||.+. ..++.++|+||||
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G  188 (258)
T d1k2pa_         155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG  188 (258)
T ss_dssp             CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ceeecccCCCCCcCCcHHhcCCCCCcceeecccc
Confidence            2  22356788999999997 5589999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-29  Score=157.70  Aligned_cols=108  Identities=24%  Similarity=0.313  Sum_probs=88.3

Q ss_pred             CCCcCCCCHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRI---VAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l---~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~   77 (110)
                      ||||+++.+....   .....+++.+++.++.|++.||.|||+++|+||||||+||+++.++  ..+|++|||++.....
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~--~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT--CCEEECCCTTCEECCT
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC--CceeEecccchhhccC
Confidence            6899865333322   3456799999999999999999999999999999999999995432  3589999999987765


Q ss_pred             ccccccccccccccccccccc--cCCCccceeecC
Q 033837           78 REQFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      ........|++.|+|||.+.+  .|+.++|+||+|
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG  210 (350)
T d1q5ka_         176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG  210 (350)
T ss_dssp             TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             CcccccccccccccChHHhhcccCCCcceeecccc
Confidence            555556788999999998763  489999999997

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.7e-29  Score=155.03  Aligned_cols=107  Identities=18%  Similarity=0.248  Sum_probs=88.7

Q ss_pred             CCCcCCCCHHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEE
Q 033837            1 MKLCEEGELVDRIVAKG------------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFV   56 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~------------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~   56 (110)
                      |||+++|+|.+++....                        .+++..+..++.|++.|+.|+|+++++||||||+||+++
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld  174 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG  174 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEEC
Confidence            68999999999986432                        378899999999999999999999999999999999995


Q ss_pred             eCCCCceEEEeecccceecCCccc---cccccccccccccccccc-cCCCccceeecC
Q 033837           57 NKKKSFSLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        57 ~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .   ...+||+|||+++.......   .....+++.|+|||.+.+ .|+.++|+||||
T Consensus       175 ~---~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~G  229 (301)
T d1lufa_         175 E---NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG  229 (301)
T ss_dssp             G---GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             C---CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccch
Confidence            3   45699999999876544322   223567889999999984 589999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.6e-29  Score=155.08  Aligned_cols=106  Identities=25%  Similarity=0.456  Sum_probs=88.6

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|+|.+++.. .++++..++.++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++........
T Consensus        89 ~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~---~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          89 VTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECCGGGC
T ss_pred             EEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECC---CCCEEEcccCceeeccCCCc
Confidence            367789999999865 47999999999999999999999999999999999999953   44699999999876543322


Q ss_pred             ----ccccccccccccccccc-c-cCCCccceeecC
Q 033837           81 ----FNELVGSLYYMALEVLK-R-NYGPEVDVWSML  110 (110)
Q Consensus        81 ----~~~~~~~~~~~~pe~~~-~-~~~~~~d~wslg  110 (110)
                          .....|++.|+|||++. + .++.++|+||+|
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG  200 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG  200 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHH
T ss_pred             cceeeccccccceechHHHhhcCCCCCchhhhhccC
Confidence                23457899999999985 3 478899999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=7.1e-29  Score=151.74  Aligned_cols=109  Identities=19%  Similarity=0.316  Sum_probs=90.1

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCC--CCceEEEeecccceecCC
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKK--KSFSLKAIDFGLSVFFRP   77 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~--~~~~~~l~d~g~~~~~~~   77 (110)
                      |||| +++|.+++... ..++...+..++.|++.|+.|+|+++++||||||+||+++...  ....++++|||+++....
T Consensus        80 me~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          80 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            6888 67999988765 5799999999999999999999999999999999999996432  234699999999987643


Q ss_pred             cc--------ccccccccccccccccccc-cCCCccceeecC
Q 033837           78 RE--------QFNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        78 ~~--------~~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      ..        ......||+.|+|||.+.+ .++.++|+||||
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG  200 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALG  200 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhh
Confidence            21        1223579999999999985 489999999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=151.50  Aligned_cols=107  Identities=26%  Similarity=0.432  Sum_probs=91.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|+|.+++...+.+++..+..++.|++.|+.|+|+++++||||+|+||+++.   ...++++|||++........
T Consensus       108 ~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~---~~~vkL~DFG~a~~~~~~~~  184 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADET  184 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TSCEEESCSSEEEECCGGGG
T ss_pred             eecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecC---CCCEEEeeccchhhhccccc
Confidence            699999999999998889999999999999999999999999999999999999954   34599999999877644322


Q ss_pred             --cccccccccccccccccc---cCCCccceeecC
Q 033837           81 --FNELVGSLYYMALEVLKR---NYGPEVDVWSML  110 (110)
Q Consensus        81 --~~~~~~~~~~~~pe~~~~---~~~~~~d~wslg  110 (110)
                        .....|++.|++||.+.+   .++.++|+||+|
T Consensus       185 ~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG  219 (322)
T d1vzoa_         185 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG  219 (322)
T ss_dssp             GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHH
T ss_pred             ccccccccccccchhHHhhcCCcCCCchhhhHHHH
Confidence              344678999999998863   367899999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9e-29  Score=152.35  Aligned_cols=107  Identities=21%  Similarity=0.263  Sum_probs=90.7

Q ss_pred             CCCcCCCCHHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCc
Q 033837            1 MKLCEEGELVDRIVAKG------------------HYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSF   62 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~   62 (110)
                      ||||++|+|.+++.+..                  .+++..+..++.|++.|+.|||+++++||||||+||+++.   ..
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~---~~  182 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GR  182 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET---TT
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccc---cC
Confidence            79999999999987542                  5889999999999999999999999999999999999954   34


Q ss_pred             eEEEeecccceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           63 SLKAIDFGLSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        63 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .++++|||.++.......   .....+++.|+|||.+. +.++.++|+||||
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G  234 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG  234 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchH
Confidence            689999999887643322   23357889999999998 4589999999997

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5e-29  Score=151.19  Aligned_cols=107  Identities=22%  Similarity=0.350  Sum_probs=87.9

Q ss_pred             CCCcCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVA-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|++.+++.. .+.+++..+..++.|++.|+.|||+++++||||+|+||+++.+   ..+|++|||++.......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~---~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCC-C
T ss_pred             eeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc---cceeeccchhhhhcccCC
Confidence            689999999998765 4679999999999999999999999999999999999999764   359999999988764332


Q ss_pred             c----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .    .....++..|+|||.+. ..++.++|+||||
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~G  201 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG  201 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHH
T ss_pred             CcceecCccccCcccCCHHHHhCCCCCcchhhhhhH
Confidence            1    12234667899999998 4588899999997

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.6e-29  Score=152.51  Aligned_cols=106  Identities=26%  Similarity=0.270  Sum_probs=87.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH--------cCCeecCCCCCceEEEeCCCCceEEEeecccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHK--------HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLS   72 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~--------~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~   72 (110)
                      ||||++|+|.+++.+. .+++.+...++.+++.|+.|+|+        ++|+||||||+||+++   ....+|++|||++
T Consensus        80 ~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~---~~~~~Kl~DFGl~  155 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             EecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc---CCCCeEEEecCcc
Confidence            7999999999999764 68899999999999999999996        5899999999999995   3456999999998


Q ss_pred             eecCCccc-----ccccccccccccccccccc-------CCCccceeecC
Q 033837           73 VFFRPREQ-----FNELVGSLYYMALEVLKRN-------YGPEVDVWSML  110 (110)
Q Consensus        73 ~~~~~~~~-----~~~~~~~~~~~~pe~~~~~-------~~~~~d~wslg  110 (110)
                      ........     .....||+.|+|||++.+.       ++.++|+||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~G  205 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhH
Confidence            87643321     2235789999999998632       45689999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.4e-28  Score=150.46  Aligned_cols=107  Identities=21%  Similarity=0.323  Sum_probs=90.0

Q ss_pred             CCCcCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc
Q 033837            1 MKLCEEGELVDRIVAK-GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~   79 (110)
                      ||||++|+|.+++... ..+++..+..++.|++.|+.|+|+.+++||||+|+||+++   ....+|++|||+++......
T Consensus       108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSSGGGCCTTTTT
T ss_pred             EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---CCCCEEEecccchhhccccc
Confidence            6999999999988754 5688889999999999999999999999999999999994   34569999999998764332


Q ss_pred             c-----ccccccccccccccccc-ccCCCccceeecC
Q 033837           80 Q-----FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        80 ~-----~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .     .....|++.|+|||.+. +.++.++|+||||
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfG  221 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG  221 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccceecccccccccccChHHHhcCCCCChhHhhhhH
Confidence            1     12245788899999987 5689999999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.2e-29  Score=149.46  Aligned_cols=105  Identities=20%  Similarity=0.318  Sum_probs=83.9

Q ss_pred             CCCcCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIVAK--GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      |||+++|+|.+++.+.  ..+++..+..++.||+.|+.|||+++++||||+|+||+++.   ...++++|||.+......
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~---~~~~kl~dfg~s~~~~~~  156 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASST  156 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT---TSCEEECCCCC-------
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecC---CCCEeecccccceecCCC
Confidence            6999999999999654  35899999999999999999999999999999999999954   455999999998765432


Q ss_pred             ccccccccccccccccccc-ccCCCccceeecC
Q 033837           79 EQFNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        79 ~~~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      .  ....+++.|+|||.+. +.++.++|+||||
T Consensus       157 ~--~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG  187 (262)
T d1byga_         157 Q--DTGKLPVKWTAPEALREKKFSTKSDVWSFG  187 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             C--ccccccccCCChHHHhCCCCChHHHHHhHH
Confidence            2  2345678899999987 5689999999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-28  Score=150.06  Aligned_cols=106  Identities=25%  Similarity=0.472  Sum_probs=85.5

Q ss_pred             CCCcCCCCHHHHHH-h-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCc
Q 033837            1 MKLCEEGELVDRIV-A-KGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPR   78 (110)
Q Consensus         1 ~e~~~~g~l~~~l~-~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~   78 (110)
                      ||||.+ .+.+++. . ...+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||.+......
T Consensus        80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~---~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECSTTHHHHHCCC
T ss_pred             EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecc---cCcceeccCCcceeccCC
Confidence            688876 4444443 3 467999999999999999999999999999999999999953   345899999998766433


Q ss_pred             -cccccccccccccccccccc-c-CCCccceeecC
Q 033837           79 -EQFNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        79 -~~~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                       .......|++.|+|||.+.. . ++.++|+||+|
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlG  190 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG  190 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccc
Confidence             23344678999999998763 3 68899999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3e-28  Score=150.26  Aligned_cols=107  Identities=24%  Similarity=0.432  Sum_probs=87.2

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCcc-
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPRE-   79 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~-   79 (110)
                      ||||.++++.........+++..++.++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||++....... 
T Consensus        96 ~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~---~~~~kl~dfg~~~~~~~~~~  172 (318)
T d3blha1          96 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARAFSLAKN  172 (318)
T ss_dssp             EECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TSCEEECCCTTCEECCC---
T ss_pred             EeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecC---CCcEEeeecceeeecccccc
Confidence            578887666655555678999999999999999999999999999999999999954   4459999999987654321 


Q ss_pred             ----ccccccccccccccccccc--cCCCccceeecC
Q 033837           80 ----QFNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        80 ----~~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                          .....+||+.|+|||.+.+  .|+.++|+||+|
T Consensus       173 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlG  209 (318)
T d3blha1         173 SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  209 (318)
T ss_dssp             --CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCC
Confidence                1233578999999999863  489999999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=4.1e-28  Score=147.80  Aligned_cols=107  Identities=25%  Similarity=0.441  Sum_probs=85.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.++++..+....+.+++..+..++.|++.||.|||+++|+||||||+||+++.   ...+|++|||.+........
T Consensus        79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~---~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TSCEEECCTTHHHHHCC---
T ss_pred             EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcC---CCCEEecccccceecccCcc
Confidence            467777666666666788999999999999999999999999999999999999954   34599999999877644322


Q ss_pred             -cccccccccccccccccc--cCCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                       .....+++.|++||.+.+  .++.++|+||+|
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslG  188 (286)
T d1ob3a_         156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG  188 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             ccceecccchhhhHHHHhCCCCCCcceeehhcC
Confidence             234568889999999863  478999999997

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.9e-27  Score=147.28  Aligned_cols=103  Identities=24%  Similarity=0.409  Sum_probs=85.4

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||| +.++.... +.+++++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||.+......  
T Consensus       102 ~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~---~~~~kl~Dfg~a~~~~~~--  174 (346)
T d1cm8a_         102 MPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLARQADSE--  174 (346)
T ss_dssp             EECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---TCCEEECCCTTCEECCSS--
T ss_pred             Eecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccc---ccccccccccceeccCCc--
Confidence            5788 44666654 4568999999999999999999999999999999999999954   445999999998775432  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....+++.|+|||.+.+  .++.++|+||+|
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  206 (346)
T d1cm8a_         175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG  206 (346)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred             cccccccccccCHHHHcCCCCCCccchhhcch
Confidence            234678999999999864  368899999997

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.2e-27  Score=145.24  Aligned_cols=107  Identities=20%  Similarity=0.272  Sum_probs=88.8

Q ss_pred             CCCcCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecc
Q 033837            1 MKLCEEGELVDRIVAK----------GHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFG   70 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g   70 (110)
                      ||||++|+|.+++...          ..++...+..++.|++.|+.|||+++++||||+|+||+++   ....+||+|||
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld---~~~~~Kl~DFG  178 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFG  178 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCCEEECCTT
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec---CCceEEEeecc
Confidence            6899999999988532          2368899999999999999999999999999999999994   44569999999


Q ss_pred             cceecCCccc---ccccccccccccccccc-ccCCCccceeecC
Q 033837           71 LSVFFRPREQ---FNELVGSLYYMALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        71 ~~~~~~~~~~---~~~~~~~~~~~~pe~~~-~~~~~~~d~wslg  110 (110)
                      +++.+.....   .....+++.|++||.+. +.++.++|+||||
T Consensus       179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G  222 (308)
T d1p4oa_         179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  222 (308)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHH
Confidence            9876643322   22346789999999987 4588899999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-26  Score=141.64  Aligned_cols=107  Identities=23%  Similarity=0.461  Sum_probs=89.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||++.++++..+....+.+++..+..++.|++.|+.|||+++|+||||||+||+++.   ...+|++|||.+........
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~---~~~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEECCCTTCEECCSCCS
T ss_pred             eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc---CCceeeeecchhhcccCCCc
Confidence            477888888888888889999999999999999999999999999999999999954   34599999999987654332


Q ss_pred             -cccccccccccccccccc-c-CCCccceeecC
Q 033837           81 -FNELVGSLYYMALEVLKR-N-YGPEVDVWSML  110 (110)
Q Consensus        81 -~~~~~~~~~~~~pe~~~~-~-~~~~~d~wslg  110 (110)
                       .....+++.|.+||.+.. . ++.++|+||+|
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG  189 (292)
T d1unla_         157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  189 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             cceeeccccchhhhhHhccCCCCCchhhccccc
Confidence             233456778999998863 3 68899999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7e-27  Score=145.52  Aligned_cols=104  Identities=22%  Similarity=0.402  Sum_probs=83.7

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+.+|+|.+++. .+++++..++.++.|++.||.|||+++|+||||||+||+++.   ...++++|||.+......  
T Consensus       101 ~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~---~~~~kl~dfg~a~~~~~~--  174 (348)
T d2gfsa1         101 VTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLARHTDDE--  174 (348)
T ss_dssp             EEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---TCCEEECCC----CCTGG--
T ss_pred             EEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccc---cccccccccchhcccCcc--
Confidence            46788999999874 457999999999999999999999999999999999999954   445899999988654322  


Q ss_pred             cccccccccccccccccc--cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR--NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~--~~~~~~d~wslg  110 (110)
                      .....|++.|+|||...+  .++.++|+||+|
T Consensus       175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlG  206 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG  206 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHH
T ss_pred             cccccccccccCchhhcCCccCCcccchhhhh
Confidence            234578889999998764  368899999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.5e-27  Score=145.91  Aligned_cols=104  Identities=27%  Similarity=0.445  Sum_probs=77.3

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      ||||.+ ++.+.+  ...+++..++.++.|++.|+.|||++||+||||||+||+++.   ...++++|||.+........
T Consensus       101 ~Ey~~~-~l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~---~~~~kl~df~~~~~~~~~~~  174 (355)
T d2b1pa1         101 MELMDA-NLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM  174 (355)
T ss_dssp             EECCSE-EHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT---TCCEEECCCCC---------
T ss_pred             Eeccch-HHHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccc---ccceeeechhhhhccccccc
Confidence            689976 444544  356999999999999999999999999999999999999954   34589999998776655444


Q ss_pred             cccccccccccccccccc-cCCCccceeecC
Q 033837           81 FNELVGSLYYMALEVLKR-NYGPEVDVWSML  110 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~-~~~~~~d~wslg  110 (110)
                      .....+|+.|+|||++.+ .+++++|+||+|
T Consensus       175 ~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG  205 (355)
T d2b1pa1         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVG  205 (355)
T ss_dssp             ------CCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cccccccccccChhhhcCCCCCCCccccccc
Confidence            455678999999999985 489999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=4.2e-22  Score=124.20  Aligned_cols=93  Identities=19%  Similarity=0.392  Sum_probs=77.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHH-cCCeecCCCCCceEEEeCCC---CceEEEeecccceecCCcccccccccccccc
Q 033837           16 KGHYTERVAAAVMKTIVEVVQVCHK-HGVMHHDLNPKKILFVNKKK---SFSLKAIDFGLSVFFRPREQFNELVGSLYYM   91 (110)
Q Consensus        16 ~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~il~~~~~~---~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~   91 (110)
                      ...+++..+..++.|++.|+.|||+ .+|+||||||+||+++.++.   ...++++|||.+......  .....|++.|+
T Consensus       119 ~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~--~~~~~gt~~y~  196 (362)
T d1q8ya_         119 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYR  196 (362)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGC
T ss_pred             ccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc--ccccccccccc
Confidence            3679999999999999999999998 88999999999999964332   235899999988765332  23457899999


Q ss_pred             cccccc-ccCCCccceeecC
Q 033837           92 ALEVLK-RNYGPEVDVWSML  110 (110)
Q Consensus        92 ~pe~~~-~~~~~~~d~wslg  110 (110)
                      |||++. ..++.++|+||+|
T Consensus       197 aPE~~~~~~~~~~~DiwSlG  216 (362)
T d1q8ya_         197 SPEVLLGAPWGCGADIWSTA  216 (362)
T ss_dssp             CHHHHHTCCCCTHHHHHHHH
T ss_pred             ChhhccccCCCccccccchH
Confidence            999887 4589999999987

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.71  E-value=3e-19  Score=102.83  Aligned_cols=97  Identities=25%  Similarity=0.285  Sum_probs=64.1

Q ss_pred             CCCcCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCCeecCCCCCceEEEeCCCCceEEEeecccceecCCccc
Q 033837            1 MKLCEEGELVDRIVAKGHYTERVAAAVMKTIVEVVQVCHKHGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVFFRPREQ   80 (110)
Q Consensus         1 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~~~~~~~   80 (110)
                      |||+++..+.+       ++...+..++.|++.++.++|+++++|+|+||+||+++++    .++++|||.+........
T Consensus        89 me~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~----~~~liDFG~a~~~~~~~~  157 (191)
T d1zara2          89 MELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE----GIWIIDFPQSVEVGEEGW  157 (191)
T ss_dssp             EECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT----EEEECCCTTCEETTSTTH
T ss_pred             EEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC----CEEEEECCCcccCCCCCc
Confidence            46666543322       4455667889999999999999999999999999999632    388999998876543221


Q ss_pred             cccccccccccccccccccCCCccceeec
Q 033837           81 FNELVGSLYYMALEVLKRNYGPEVDVWSM  109 (110)
Q Consensus        81 ~~~~~~~~~~~~pe~~~~~~~~~~d~wsl  109 (110)
                      ......... .-.+...+.|+..+|+||+
T Consensus       158 ~~~l~rd~~-~~~~~f~r~y~~~~d~~s~  185 (191)
T d1zara2         158 REILERDVR-NIITYFSRTYRTEKDINSA  185 (191)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHCCCCCHHHH
T ss_pred             HHHHHHHHH-HHHHHHcCCCCCcccHHHH
Confidence            100000000 0012223568899999985

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.89  E-value=0.0015  Score=38.95  Aligned_cols=31  Identities=29%  Similarity=0.428  Sum_probs=24.3

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++||.|+.++|++++.   .....++||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~~---~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLG---DELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEET---TEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhccc---ccceeEeccccccc
Confidence            56899999999999963   23457899997654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.89  E-value=0.019  Score=32.85  Aligned_cols=30  Identities=27%  Similarity=0.178  Sum_probs=22.8

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||+++++   ....++||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~---~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDG---KVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETT---EEEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCC---ceEEEeechhccc
Confidence            37999999999999532   2346999986654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.64  E-value=0.017  Score=32.92  Aligned_cols=30  Identities=27%  Similarity=0.079  Sum_probs=23.1

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||++..+   ..+.++||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~~~---~~~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENG---RFSGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEETT---EEEEECCCTTCEE
T ss_pred             eEEeCCCCCcceEEeCC---ceEEEEEchhccc
Confidence            37999999999999532   3357899987654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.056  Score=32.19  Aligned_cols=29  Identities=17%  Similarity=0.117  Sum_probs=22.0

Q ss_pred             cCCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           41 HGVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        41 ~~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .+++|+|+.+.||+++.  .   ..++||+.+..
T Consensus       192 ~~liHgDlh~~NvL~~~--~---~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD--G---PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEESS--S---EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEeC--C---ceEEechhccc
Confidence            35799999999999842  1   34789986654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=92.64  E-value=0.03  Score=34.40  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=23.5

Q ss_pred             CCeecCCCCCceEEEeCCCCceEEEeeccccee
Q 033837           42 GVMHHDLNPKKILFVNKKKSFSLKAIDFGLSVF   74 (110)
Q Consensus        42 ~i~h~~l~~~~il~~~~~~~~~~~l~d~g~~~~   74 (110)
                      .++|+|+.+.||+++++    .++++|+..+..
T Consensus       224 ~LiHGDl~~gNIlv~~~----~~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH----ETKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSS----CEEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCC----ceEEechhhccc
Confidence            58999999999999643    278999976654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.56  E-value=0.13  Score=31.39  Aligned_cols=15  Identities=33%  Similarity=0.534  Sum_probs=13.2

Q ss_pred             CeecCCCCCceEEEe
Q 033837           43 VMHHDLNPKKILFVN   57 (110)
Q Consensus        43 i~h~~l~~~~il~~~   57 (110)
                      ++|+|+.+.||++.+
T Consensus       220 ~CHnDL~~~NiL~~~  234 (395)
T d1nw1a_         220 FCHNDLQEGNILLPK  234 (395)
T ss_dssp             EECSCCCGGGEEEEC
T ss_pred             EEecCCCcccEeecc
Confidence            589999999999854