Query 033840
Match_columns 110
No_of_seqs 102 out of 1018
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:22:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q71_A Poly [ADP-ribose] polym 100.0 6.6E-36 2.3E-40 209.4 14.7 110 1-110 100-217 (221)
2 3q6z_A Poly [ADP-ribose] polym 100.0 8.5E-36 2.9E-40 208.1 13.6 109 1-109 98-214 (214)
3 1spv_A Putative polyprotein/ph 100.0 3.1E-35 1E-39 201.3 14.3 109 1-109 64-176 (184)
4 2xd7_A Core histone macro-H2A. 100.0 1E-34 3.5E-39 200.0 13.5 105 1-106 83-192 (193)
5 1yd9_A Core histone macro-H2A. 100.0 3.8E-34 1.3E-38 197.1 14.3 107 1-108 80-191 (193)
6 2x47_A Macro domain-containing 100.0 3.5E-34 1.2E-38 202.4 14.5 109 1-109 119-233 (235)
7 4abl_A Poly [ADP-ribose] polym 100.0 3.3E-33 1.1E-37 191.0 13.8 98 1-107 79-181 (183)
8 2dx6_A Hypothetical protein TT 100.0 3.1E-32 1.1E-36 182.4 12.0 101 1-104 59-159 (159)
9 3gpg_A NSP3, non-structural pr 100.0 2.2E-32 7.5E-37 184.6 9.2 102 1-106 62-166 (168)
10 1vhu_A Hypothetical protein AF 100.0 4.8E-32 1.7E-36 188.8 11.0 107 1-109 88-202 (211)
11 3kh6_A Poly [ADP-ribose] polym 100.0 1.4E-31 4.8E-36 184.9 12.6 99 1-108 90-193 (199)
12 3gqe_A Non-structural protein 100.0 9.3E-31 3.2E-35 176.7 12.2 103 1-106 56-160 (168)
13 3eti_A X (ADRP) domain, macro 100.0 5.2E-30 1.8E-34 173.1 7.6 93 1-105 75-167 (168)
14 3ejf_A Non-structural protein 99.9 1.7E-27 5.9E-32 161.6 8.9 95 2-104 81-175 (176)
15 2acf_A Replicase polyprotein 1 99.9 2E-27 6.7E-32 162.2 7.8 92 1-109 85-176 (182)
16 3ejg_A Non-structural protein 99.9 6.9E-27 2.4E-31 160.5 9.1 90 1-105 103-192 (193)
17 4gua_A Non-structural polyprot 99.9 3.2E-25 1.1E-29 170.1 11.5 102 1-106 396-500 (670)
18 2vri_A Non-structural protein 99.9 1.1E-25 3.9E-30 152.6 7.9 91 1-106 82-172 (174)
19 1njr_A 32.1 kDa protein in ADH 99.9 2.5E-25 8.7E-30 160.5 7.7 93 1-94 119-237 (284)
20 2eee_A Uncharacterized protein 99.8 4.9E-19 1.7E-23 117.2 8.5 75 1-79 64-139 (149)
21 2jyc_A Uncharacterized protein 99.8 8.9E-19 3E-23 117.2 8.8 75 1-79 75-150 (160)
22 2fg1_A Conserved hypothetical 99.7 2.7E-16 9.2E-21 104.8 7.9 76 1-79 67-148 (158)
23 3sig_A PArg, poly(ADP-ribose) 99.6 1.2E-14 4E-19 104.5 9.1 93 14-106 171-276 (277)
24 3dhn_A NAD-dependent epimerase 84.6 4.3 0.00015 26.5 6.9 44 11-55 67-110 (227)
25 2vg0_A Short-chain Z-isoprenyl 81.4 3.3 0.00011 28.5 5.3 48 34-82 33-80 (227)
26 3ugs_B Undecaprenyl pyrophosph 73.6 5.9 0.0002 27.3 4.7 47 34-81 36-82 (225)
27 3h2s_A Putative NADH-flavin re 72.5 16 0.00056 23.5 7.4 42 11-55 62-103 (224)
28 4h8e_A Undecaprenyl pyrophosph 69.8 7.3 0.00025 27.4 4.6 47 34-81 54-100 (256)
29 2vg3_A Undecaprenyl pyrophosph 62.6 12 0.00041 26.7 4.6 40 34-73 85-124 (284)
30 3l7q_A Putative translation in 62.4 23 0.00079 21.5 5.4 26 84-109 71-96 (125)
31 3sgv_B Undecaprenyl pyrophosph 61.9 7.7 0.00026 27.2 3.4 48 33-81 46-93 (253)
32 3kjj_A NMB1025 protein; YJGF p 61.7 25 0.00087 21.6 5.7 26 84-109 68-93 (128)
33 3ew7_A LMO0794 protein; Q8Y8U8 61.2 13 0.00044 23.8 4.4 42 11-56 61-102 (221)
34 1qu9_A YJGF protein; structura 61.1 25 0.00086 21.4 5.6 26 84-109 71-96 (128)
35 2d2r_A Undecaprenyl pyrophosph 58.9 9.4 0.00032 26.6 3.4 40 34-73 45-84 (245)
36 3m2p_A UDP-N-acetylglucosamine 58.3 26 0.0009 23.9 5.8 44 11-54 62-106 (311)
37 3vcz_A Endoribonuclease L-PSP; 57.5 30 0.001 22.0 5.5 44 66-109 70-120 (153)
38 2zvr_A Uncharacterized protein 56.0 35 0.0012 23.1 6.1 62 31-93 109-170 (290)
39 3lyb_A Putative endoribonuclea 55.9 15 0.00053 23.7 3.9 26 84-109 94-119 (165)
40 2c29_D Dihydroflavonol 4-reduc 55.5 33 0.0011 23.6 5.9 45 11-55 77-126 (337)
41 1jd1_A Hypothetical 13.9 kDa p 53.6 34 0.0012 20.8 5.2 27 83-109 73-99 (129)
42 3qas_B Undecaprenyl pyrophosph 53.3 13 0.00046 25.9 3.5 39 34-72 47-85 (253)
43 1qd9_A Purine regulatory prote 53.0 35 0.0012 20.6 6.0 26 84-109 70-95 (124)
44 1x25_A Hypothetical UPF0076 pr 51.8 38 0.0013 20.6 5.1 26 84-109 74-99 (128)
45 2ewc_A Conserved hypothetical 51.8 38 0.0013 20.6 5.1 26 84-109 63-88 (126)
46 3e48_A Putative nucleoside-dip 51.7 32 0.0011 23.1 5.3 41 11-56 65-105 (289)
47 3lgd_A Adenosine deaminase CEC 51.4 80 0.0027 24.2 8.5 53 30-82 195-252 (508)
48 2b33_A Protein synthesis inhib 51.0 42 0.0014 20.9 5.9 26 84-109 84-109 (140)
49 2cwj_A Putative endonuclease; 50.9 38 0.0013 20.4 5.0 27 83-109 65-91 (123)
50 3r0p_A L-PSP putative endoribo 50.4 40 0.0014 20.4 5.7 26 84-109 74-99 (127)
51 3gtz_A Putative translation in 50.0 41 0.0014 20.4 5.2 26 84-109 62-87 (124)
52 3k0t_A Endoribonuclease L-PSP, 49.7 33 0.0011 21.5 4.7 45 65-109 63-114 (143)
53 3v4d_A Aminoacrylate peracid r 49.5 42 0.0015 20.5 5.1 26 84-109 79-104 (134)
54 3i7t_A RV2704, putative unchar 49.3 44 0.0015 21.1 5.3 27 83-109 65-91 (149)
55 3m1x_A Putative endoribonuclea 48.5 43 0.0015 21.1 5.2 45 65-109 69-120 (148)
56 3sxp_A ADP-L-glycero-D-mannohe 48.4 40 0.0014 23.6 5.5 43 11-54 90-135 (362)
57 1f75_A Undecaprenyl pyrophosph 48.2 42 0.0015 23.3 5.4 37 34-70 50-86 (249)
58 1qah_A Perchloric acid soluble 47.2 48 0.0016 20.4 5.2 26 84-109 75-100 (136)
59 3qc0_A Sugar isomerase; TIM ba 46.9 60 0.002 21.4 7.2 51 31-81 79-129 (275)
60 3quw_A Protein MMF1; chorismat 46.7 48 0.0017 21.1 5.2 43 67-109 74-123 (153)
61 4b8w_A GDP-L-fucose synthase; 46.4 29 0.00099 23.3 4.4 44 11-54 61-110 (319)
62 3gpi_A NAD-dependent epimerase 46.4 4.1 0.00014 27.7 -0.0 44 11-54 63-106 (286)
63 2v5b_A Triosephosphate isomera 45.5 11 0.00038 26.2 2.1 66 15-82 117-189 (244)
64 4id9_A Short-chain dehydrogena 45.5 48 0.0016 22.8 5.5 44 11-54 77-123 (347)
65 3k12_A Uncharacterized protein 45.3 34 0.0012 20.7 4.2 26 84-109 60-85 (122)
66 2gn4_A FLAA1 protein, UDP-GLCN 45.1 76 0.0026 22.2 6.9 70 11-80 91-165 (344)
67 1xrg_A Putative translation in 44.4 54 0.0018 20.9 5.1 43 67-109 79-128 (156)
68 2dyy_A UPF0076 protein PH0854; 44.3 34 0.0012 20.7 4.0 24 86-109 74-97 (126)
69 2cvl_A TTHA0137, protein trans 42.8 53 0.0018 19.7 5.9 26 84-109 70-95 (124)
70 3vps_A TUNA, NAD-dependent epi 42.3 51 0.0017 22.2 5.1 43 11-54 69-116 (321)
71 2plx_B Peptide inhibitor; heli 42.0 15 0.0005 16.1 1.4 13 28-40 12-24 (26)
72 3lme_A Possible translation in 41.6 61 0.0021 20.0 6.5 26 84-109 73-99 (138)
73 3ngf_A AP endonuclease, family 41.2 77 0.0026 21.1 8.6 51 30-82 88-138 (269)
74 2jl1_A Triphenylmethane reduct 40.9 77 0.0026 21.0 7.6 41 11-56 66-106 (287)
75 1smk_A Malate dehydrogenase, g 40.4 95 0.0032 21.9 7.6 65 11-81 76-143 (326)
76 3pao_A Adenosine deaminase; st 40.3 60 0.002 23.2 5.3 53 29-82 72-127 (326)
77 1pf5_A Hypothetical protein YJ 40.1 61 0.0021 19.6 5.8 26 84-109 74-100 (131)
78 1eq2_A ADP-L-glycero-D-mannohe 39.8 74 0.0025 21.3 5.6 40 11-50 68-110 (310)
79 3iar_A Adenosine deaminase; pu 39.3 1.1E+02 0.0037 22.2 7.4 54 29-82 72-139 (367)
80 3l23_A Sugar phosphate isomera 39.0 92 0.0031 21.3 7.0 47 31-81 104-150 (303)
81 4egb_A DTDP-glucose 4,6-dehydr 39.0 48 0.0016 22.8 4.6 45 11-55 98-147 (346)
82 1i60_A IOLI protein; beta barr 38.9 82 0.0028 20.7 6.8 50 31-81 80-129 (278)
83 2v6g_A Progesterone 5-beta-red 38.1 30 0.001 24.0 3.4 42 12-53 73-116 (364)
84 2p4h_X Vestitone reductase; NA 38.0 80 0.0027 21.3 5.6 44 11-54 74-122 (322)
85 1hdo_A Biliverdin IX beta redu 37.3 74 0.0025 19.7 5.8 42 12-55 68-109 (206)
86 1hye_A L-lactate/malate dehydr 36.9 1.1E+02 0.0036 21.4 7.6 57 11-74 74-133 (313)
87 2c5a_A GDP-mannose-3', 5'-epim 36.8 47 0.0016 23.5 4.3 44 11-54 93-142 (379)
88 3e8x_A Putative NAD-dependent 35.6 30 0.001 22.5 3.0 42 11-54 84-128 (236)
89 1qtw_A Endonuclease IV; DNA re 35.4 96 0.0033 20.5 7.5 61 31-92 85-145 (285)
90 4gxw_A Adenosine deaminase; am 35.4 83 0.0028 23.0 5.5 54 29-82 90-146 (380)
91 3biy_A Histone acetyltransfera 34.9 30 0.001 25.7 3.0 35 13-49 159-193 (380)
92 3st7_A Capsular polysaccharide 34.5 41 0.0014 23.6 3.7 66 11-77 46-113 (369)
93 3obe_A Sugar phosphate isomera 34.3 1.1E+02 0.0038 20.9 7.2 48 30-81 109-156 (305)
94 3cqj_A L-ribulose-5-phosphate 34.2 1.1E+02 0.0036 20.6 6.5 50 31-81 104-153 (295)
95 1k77_A EC1530, hypothetical pr 34.1 98 0.0033 20.2 8.9 51 30-81 80-130 (260)
96 2ig8_A Hypothetical protein PA 33.8 84 0.0029 19.4 5.3 25 84-108 78-102 (144)
97 3nzo_A UDP-N-acetylglucosamine 33.8 1.3E+02 0.0045 21.5 8.8 70 11-80 112-188 (399)
98 1o6z_A MDH, malate dehydrogena 33.6 1.2E+02 0.0041 21.1 7.9 57 11-73 70-129 (303)
99 2rh8_A Anthocyanidin reductase 33.3 77 0.0026 21.6 4.9 44 11-54 80-128 (338)
100 1e6u_A GDP-fucose synthetase; 33.1 39 0.0013 23.0 3.3 44 11-54 55-104 (321)
101 3qvo_A NMRA family protein; st 32.5 1E+02 0.0035 20.0 5.5 35 11-54 88-122 (236)
102 3rys_A Adenosine deaminase 1; 31.9 73 0.0025 22.9 4.7 53 29-82 75-130 (343)
103 4f4h_A Glutamine dependent NAD 31.7 1.2E+02 0.0042 23.3 6.1 34 31-67 23-56 (565)
104 2x6t_A ADP-L-glycero-D-manno-h 31.6 1.1E+02 0.0039 21.0 5.6 40 11-50 115-157 (357)
105 2qn6_B Translation initiation 31.6 36 0.0012 19.9 2.5 34 13-49 53-86 (93)
106 1h7n_A 5-aminolaevulinic acid 31.1 1.4E+02 0.0048 21.8 5.9 46 37-82 71-124 (342)
107 1y1p_A ARII, aldehyde reductas 30.6 1.1E+02 0.0039 20.6 5.4 43 11-54 83-129 (342)
108 3i3f_A Hypothetical protein; s 29.8 1E+02 0.0034 19.0 4.9 25 84-108 82-109 (141)
109 1r6d_A TDP-glucose-4,6-dehydra 29.1 66 0.0022 22.0 4.0 44 11-54 76-124 (337)
110 3ehe_A UDP-glucose 4-epimerase 29.0 1.3E+02 0.0046 20.2 6.0 44 11-54 63-111 (313)
111 1xl7_A COT, peroxisomal carnit 28.1 63 0.0022 25.3 4.0 49 30-78 377-428 (612)
112 3ius_A Uncharacterized conserv 28.0 71 0.0024 21.2 3.9 36 11-54 63-100 (286)
113 2zcu_A Uncharacterized oxidore 27.8 1.3E+02 0.0045 19.7 5.7 38 11-55 65-102 (286)
114 3kwr_A Putative RNA-binding pr 27.6 74 0.0025 18.7 3.4 35 48-82 20-55 (97)
115 3eyi_A Z-DNA-binding protein 1 27.5 44 0.0015 18.7 2.2 33 17-51 1-38 (72)
116 3aal_A Probable endonuclease 4 26.8 1.5E+02 0.0051 20.0 7.3 61 31-93 90-150 (303)
117 3rft_A Uronate dehydrogenase; 26.1 1.5E+02 0.005 19.7 7.4 43 11-55 64-109 (267)
118 1nm8_A Carnitine O-acetyltrans 25.3 63 0.0022 25.3 3.6 49 30-78 369-420 (616)
119 3ruf_A WBGU; rossmann fold, UD 25.2 39 0.0013 23.4 2.2 45 11-55 100-149 (351)
120 1gy8_A UDP-galactose 4-epimera 24.7 64 0.0022 22.6 3.3 43 12-54 94-141 (397)
121 3lub_A Putative creatinine ami 24.6 1.7E+02 0.0059 20.0 8.7 56 39-94 53-121 (254)
122 2yy7_A L-threonine dehydrogena 24.5 44 0.0015 22.5 2.3 44 11-54 68-115 (312)
123 4dqv_A Probable peptide synthe 23.9 1.3E+02 0.0044 22.2 4.9 44 11-54 167-211 (478)
124 3ajr_A NDP-sugar epimerase; L- 23.5 72 0.0025 21.5 3.3 44 11-54 62-109 (317)
125 4f6l_B AUSA reductase domain p 23.3 1.7E+02 0.006 21.5 5.6 43 11-54 231-275 (508)
126 1y7t_A Malate dehydrogenase; N 23.2 1.7E+02 0.0056 20.4 5.2 40 11-50 80-123 (327)
127 2pzm_A Putative nucleotide sug 23.2 1.7E+02 0.0057 20.0 5.2 44 11-54 88-133 (330)
128 1sb8_A WBPP; epimerase, 4-epim 22.9 73 0.0025 22.0 3.3 44 11-54 102-150 (352)
129 2x4g_A Nucleoside-diphosphate- 22.6 1.8E+02 0.0063 19.6 7.6 44 11-54 77-123 (342)
130 1t1u_A Choline O-acetyltransfe 22.4 67 0.0023 25.3 3.2 49 30-78 383-434 (639)
131 2ket_A Cathelicidin-6; antimic 22.3 60 0.0021 14.2 1.7 12 97-108 3-14 (27)
132 2c20_A UDP-glucose 4-epimerase 22.3 68 0.0023 21.8 3.0 44 11-54 67-115 (330)
133 1t57_A Conserved protein MTH16 22.0 67 0.0023 21.8 2.7 28 30-57 33-60 (206)
134 2x7v_A Probable endonuclease 4 21.8 1.8E+02 0.0061 19.2 7.6 61 31-93 85-145 (287)
135 1vp8_A Hypothetical protein AF 21.7 69 0.0024 21.6 2.7 28 30-57 25-52 (201)
136 4f6c_A AUSA reductase domain p 21.1 2.3E+02 0.0079 20.1 8.2 43 11-54 150-194 (427)
137 1rp3_B Anti sigma factor FLGM; 20.9 51 0.0017 18.9 1.8 21 57-77 67-87 (88)
138 1ek6_A UDP-galactose 4-epimera 20.8 64 0.0022 22.1 2.6 44 11-54 81-129 (348)
139 2wqk_A 5'-nucleotidase SURE; S 20.6 2E+02 0.0069 19.7 5.1 51 30-82 101-151 (251)
140 3ko8_A NAD-dependent epimerase 20.5 2E+02 0.0068 19.2 5.2 42 13-54 64-110 (312)
141 3ay3_A NAD-dependent epimerase 20.4 1.9E+02 0.0065 18.9 7.3 41 12-54 64-107 (267)
142 3aon_B V-type sodium ATPase su 20.3 45 0.0015 20.2 1.5 31 74-106 34-64 (115)
143 2deb_A CPT II, carnitine O-pal 20.1 73 0.0025 25.2 3.0 48 31-78 420-470 (653)
No 1
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=209.36 Aligned_cols=110 Identities=24% Similarity=0.450 Sum_probs=101.3
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCC-cHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKE 79 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~-~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~ 79 (110)
+|++|++|+|+||||||+|||.|.++.. +.+.|++||++||++|++++++|||||+||||++|||++++|++|++++++
T Consensus 100 ~a~iT~g~~Lp~k~VIHtVgP~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~~~~v~~ 179 (221)
T 3q71_A 100 TVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFK 179 (221)
T ss_dssp CEEEEECTTSSSSEEEEECCCCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCCCEEEEeCCCCCcCCCchHHHHHHHHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999988653 568999999999999999999999999999999999999999999999999
Q ss_pred Hhc-----CCCEEEEEecCh--HHHHHHHHHHHHHhcC
Q 033840 80 FAN-----DFKEVHFILFTD--DIYNVWLKKAKELLQG 110 (110)
Q Consensus 80 ~~~-----~l~~I~~v~~~~--~~~~~f~~~~~~~~~~ 110 (110)
|++ .+++|+||++++ +++++|.+.|++.|+|
T Consensus 180 fl~~~~~~~l~~V~fv~f~~d~~~~~~f~~~l~~r~~~ 217 (221)
T 3q71_A 180 FSSKNQLKTLQEVHFLLHPSDHENIQAFSDEFARRANG 217 (221)
T ss_dssp HHHHCCCSSCCEEEEEECTTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCCCCEEEEEEeCCCHHHHHHHHHHHHHHccC
Confidence 984 478999999965 5789999999999865
No 2
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=208.09 Aligned_cols=109 Identities=27% Similarity=0.363 Sum_probs=101.9
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCC--cHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 78 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~ 78 (110)
+|++|++|+||||||||+|||.|.++.. +.+.|++||+++|++|+++|++|||||+||||++|||++++|++|+++++
T Consensus 98 ~a~iT~~~~L~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~ 177 (214)
T 3q6z_A 98 NATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIK 177 (214)
T ss_dssp CEEEEECTTSSSSEEEEEECCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999987642 46899999999999999999999999999999999999999999999999
Q ss_pred HHhc------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 79 EFAN------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 79 ~~~~------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+|++ .+++|+||+++++++++|++.++++|.
T Consensus 178 ~fl~~~~~~~~l~~V~fv~~d~~~~~~f~~~l~~~f~ 214 (214)
T 3q6z_A 178 ENFQFKKDGHCLKEIYLVDVSEKTVEAFAEAVKTVFK 214 (214)
T ss_dssp HHTSSCC--CCCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCCCCCCCEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 9984 478999999999999999999999984
No 3
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=100.00 E-value=3.1e-35 Score=201.29 Aligned_cols=109 Identities=34% Similarity=0.467 Sum_probs=101.8
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCC-CcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKE 79 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~-~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~ 79 (110)
+|++|++|+||||||||+|||.|+++. .+.+.|++||+++|++|.++|++|||||+||||++|||++++|++|++++++
T Consensus 64 ~a~iT~~~~L~~k~VIH~vgP~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~ 143 (184)
T 1spv_A 64 HAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSE 143 (184)
T ss_dssp CEEEECCTTSSSSEEEEECCCCCSSSSSSHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCEEEEEcCCcccCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999998764 4678999999999999999999999999999999999999999999999999
Q ss_pred Hhc---CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 80 FAN---DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 80 ~~~---~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
|++ .+++|+||+++++.+++|++.+.++|+
T Consensus 144 ~l~~~~~~~~V~~v~~~~~~~~~~~~~l~~~~~ 176 (184)
T 1spv_A 144 FITRHALPEQVYFVCYDEENAHLYERLLTQQGD 176 (184)
T ss_dssp HHHHCCSSSEEEEEESSHHHHHHHHHHHHCC--
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 985 578999999999999999999999885
No 4
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=200.01 Aligned_cols=105 Identities=23% Similarity=0.453 Sum_probs=99.1
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
||++|++|+|+||||||+|||.|..+ .+.+.|++||+++|++|.+++++|||||+||||++|||++++|++|++++++|
T Consensus 83 ~a~iT~~~~L~~k~VIH~vgP~~~~~-~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~ 161 (193)
T 2xd7_A 83 EAAVSQSSGLAAKFVIHCHIPQWGSD-KCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAH 161 (193)
T ss_dssp CEEEEECTTSSSSEEEEEECCCTTST-THHHHHHHHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHH
T ss_pred CeEEeeCCCCCCCEEEEECCCcCCCc-chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999754 57789999999999999999999999999999999999999999999999999
Q ss_pred hc-----CCCEEEEEecChHHHHHHHHHHHH
Q 033840 81 AN-----DFKEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 81 ~~-----~l~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
++ ++++|+||+++++++++|++.|.+
T Consensus 162 l~~~~~~~l~~V~fv~~~~~~~~~~~~~l~~ 192 (193)
T 2xd7_A 162 FDDSSASSLKNVYFLLFDSESIGIYVQEMAK 192 (193)
T ss_dssp HHHCSSCCCCEEEEEECSHHHHHHHHHHHHC
T ss_pred HHhcCCCCCCEEEEEECCHHHHHHHHHHHhh
Confidence 84 478999999999999999999875
No 5
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=100.00 E-value=3.8e-34 Score=197.15 Aligned_cols=107 Identities=27% Similarity=0.525 Sum_probs=100.0
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+|++|++|+||||||||+|||.|.. ..+.+.|++||+++|++|.+++++|||||+||||++|||++++|++|++++++|
T Consensus 80 ~a~iT~~~~L~~k~VIH~vgP~~~~-~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~ 158 (193)
T 1yd9_A 80 GAAVSAGHGLPAKFVIHCNSPVWGS-DKCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSY 158 (193)
T ss_dssp CEEEEECTTSSSSEEEEECCCCTTS-TTHHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHHHHH
T ss_pred CEEEecCCCCCCCEEEEeCCCCcCC-cchHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHHHHH
Confidence 6899999999999999999999975 356789999999999999999999999999999999999999999999999999
Q ss_pred hc-----CCCEEEEEecChHHHHHHHHHHHHHh
Q 033840 81 AN-----DFKEVHFILFTDDIYNVWLKKAKELL 108 (110)
Q Consensus 81 ~~-----~l~~I~~v~~~~~~~~~f~~~~~~~~ 108 (110)
++ ++++|+||+++++++++|++.|.++-
T Consensus 159 l~~~~~~~l~~V~fv~~~~~~~~~~~~~l~~~~ 191 (193)
T 1yd9_A 159 FVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLD 191 (193)
T ss_dssp HTTCTTCCCCEEEEECCSHHHHHHHHHHHTTTT
T ss_pred HHhcCCCCcCEEEEEECCHHHHHHHHHHHHhhh
Confidence 85 47899999999999999999998653
No 6
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=202.40 Aligned_cols=109 Identities=28% Similarity=0.474 Sum_probs=102.8
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCC--CcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 78 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~--~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~ 78 (110)
||++|++|+|+||||||+|||.|.++. .+.+.|++||+++|++|.++|++|||||+||||++|||++++|++|+++++
T Consensus 119 ~a~iT~~~~L~~k~VIH~vgP~~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~ 198 (235)
T 2x47_A 119 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLR 198 (235)
T ss_dssp CEEEEECTTSSSSEEEEEBCCCCTTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHH
T ss_pred ceEEecCCCCCCCEEEEecCccccCCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHH
Confidence 689999999999999999999997643 467899999999999999999999999999999999999999999999999
Q ss_pred HHhc----CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 79 EFAN----DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 79 ~~~~----~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+|++ .+++|+||+++++.++.|++.+..||+
T Consensus 199 ~fl~~~~~~l~~V~fv~f~~~~~~~y~~~l~~~fp 233 (235)
T 2x47_A 199 EWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFP 233 (235)
T ss_dssp HHHHHHGGGCSEEEEEECSHHHHHHHHHHHHHHSC
T ss_pred HHHHhCCCCCCeEEEEECCHHHHHHHHHHHHHhcC
Confidence 9984 489999999999999999999999986
No 7
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=100.00 E-value=3.3e-33 Score=191.03 Aligned_cols=98 Identities=23% Similarity=0.384 Sum_probs=93.7
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
++++|++|+|+||||||+|||.| |++||+++|++|++++++|||||+||||++|||++++|++|++++++|
T Consensus 79 ~a~iT~~~~L~~k~VIH~vgP~~---------L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~f 149 (183)
T 4abl_A 79 DYIITGGGFLRCKNIIHVIGGND---------VKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIEDF 149 (183)
T ss_dssp SEEEEECTTSBSSEEEEEETTSC---------HHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHH
T ss_pred ceEEecCCCCCCCEEEEeCcHHH---------HHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHHH
Confidence 68999999999999999999975 999999999999999999999999999999999999999999999999
Q ss_pred hc-----CCCEEEEEecChHHHHHHHHHHHHH
Q 033840 81 AN-----DFKEVHFILFTDDIYNVWLKKAKEL 107 (110)
Q Consensus 81 ~~-----~l~~I~~v~~~~~~~~~f~~~~~~~ 107 (110)
++ .+++|+||+++++++++|++.|++.
T Consensus 150 l~~~~~~~l~~V~fv~f~~~~~~~f~~~l~kr 181 (183)
T 4abl_A 150 VQKGSAQSVKKVKVVIFLPQVLDVFYANMKKR 181 (183)
T ss_dssp HHTTCCSSCCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 84 4789999999999999999999874
No 8
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=99.98 E-value=3.1e-32 Score=182.43 Aligned_cols=101 Identities=21% Similarity=0.233 Sum_probs=95.6
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
++++|++|+|+||||||++||.|+ ..+.+.|++||+++|+.|+++|++|||||+||||++|+|++++|++|++++++|
T Consensus 59 ~a~it~~~~L~~~~Vih~vgp~~~--~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~~~~~ 136 (159)
T 2dx6_A 59 EAAVTGAGNLPVRYVIHAAVLGDE--PASLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEEIKKA 136 (159)
T ss_dssp CEEEEECTTSSSSEEEEEEEESSS--CCCHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHTTS
T ss_pred cEEEecCCCCCCCEEEEEeCCCCC--CchHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHHHHhc
Confidence 689999999999999999999998 246789999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEEecChHHHHHHHHHH
Q 033840 81 ANDFKEVHFILFTDDIYNVWLKKA 104 (110)
Q Consensus 81 ~~~l~~I~~v~~~~~~~~~f~~~~ 104 (110)
+++++|+||+++++.++.|++.+
T Consensus 137 -~~~~~V~~v~~~~~~~~~~~~~l 159 (159)
T 2dx6_A 137 -PDTLEVTLYGYREEDAEAIRRAL 159 (159)
T ss_dssp -CTTCEEEEEESSHHHHHHHHHHC
T ss_pred -CCCCEEEEEECCHHHHHHHHHhC
Confidence 88899999999999999998753
No 9
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=99.97 E-value=2.2e-32 Score=184.57 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=93.3
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCC--cHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 78 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~ 78 (110)
+|++|+++ ||||||+|||.|.++.. +.+.|++||+++|++|+++|++|||||+||||++|||++++|+ +++++.
T Consensus 62 ~a~iT~~~---~k~VIHtVGP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~-ai~~v~ 137 (168)
T 3gpg_A 62 TAKTVMCG---TYPVIHAVGPNFSNYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ-SLNHLF 137 (168)
T ss_dssp CEEEEEET---TEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHH-HC-CHH
T ss_pred CEEEecCC---CCEEEEeCCCCcCCCCcchHHHHHHHHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHH-HHHHHH
Confidence 68999995 99999999999998653 3579999999999999999999999999999999999999999 889999
Q ss_pred HHhc-CCCEEEEEecChHHHHHHHHHHHH
Q 033840 79 EFAN-DFKEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 79 ~~~~-~l~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
++++ .+++|+||++++++++.|++.|++
T Consensus 138 ~~~~~~~~~V~fv~f~~~~~~~y~~~l~~ 166 (168)
T 3gpg_A 138 TAMDSTDADVVIYCRDKEWEKKISEAIQM 166 (168)
T ss_dssp HHHTTCCSEEEEEESCHHHHHHHHHHHHT
T ss_pred HhccCCCCEEEEEECCHHHHHHHHHHHhc
Confidence 9986 578999999999999999999875
No 10
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=99.97 E-value=4.8e-32 Score=188.84 Aligned_cols=107 Identities=25% Similarity=0.374 Sum_probs=99.9
Q ss_pred CeeEccCCCCCC---ceEEEecCC----CCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHH
Q 033840 1 MLKECRGFKLPV---SHVIHTVGP----VFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIA 73 (110)
Q Consensus 1 ~a~iT~~g~L~~---k~IiH~v~P----~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~ 73 (110)
+|++|++|+||| |||||+||| .|.+ .+.+.|++||+++|++|.+++++|||||+||||++|||++++|++|
T Consensus 88 ~a~iT~~~~L~~~g~k~VIH~vgP~~~~~~~~--~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~ 165 (211)
T 1vhu_A 88 EVVVTPAMNLEERGIKYVFHTVGPICSGMWSE--ELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETF 165 (211)
T ss_dssp CCEEEECGGGGGGTCCEEEEEECCCCTTCCCH--HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHH
T ss_pred cEEEEECCCCCccCcCEEEEecCCccccccCc--chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHH
Confidence 689999999999 999999999 9953 5678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 74 ISTVKEFAN-DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 74 ~~~i~~~~~-~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++++++|++ .+++|+||+++++.++.|++.++++..
T Consensus 166 ~~~v~~~l~~~l~~V~~v~~~~~~~~~~~~~l~~~~~ 202 (211)
T 1vhu_A 166 LEAVKNFKGSAVKEVALVIYDRKSAEVALKVFERSLE 202 (211)
T ss_dssp HHHHHHCCCSSCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhc
Confidence 999999984 378999999999999999999998864
No 11
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=99.97 E-value=1.4e-31 Score=184.93 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=93.7
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
++++|++|+|+||||||++||. .|++||+++|++|+++|++|||||+||||++|||++++|++|++++++|
T Consensus 90 ~a~iT~g~~L~~k~VIH~vgp~---------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~f 160 (199)
T 3kh6_A 90 DFIITPGGCLKCKIIIHVPGGK---------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDF 160 (199)
T ss_dssp SSEEEECTTSSSSEEEEEETTS---------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCEEEEeCCCH---------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHH
Confidence 6899999999999999999994 5999999999999999999999999999999999999999999999999
Q ss_pred hc-----CCCEEEEEecChHHHHHHHHHHHHHh
Q 033840 81 AN-----DFKEVHFILFTDDIYNVWLKKAKELL 108 (110)
Q Consensus 81 ~~-----~l~~I~~v~~~~~~~~~f~~~~~~~~ 108 (110)
++ .+++|+||+++++++++|++.|++..
T Consensus 161 l~~~~~~~l~~V~fv~f~~~~~~~f~~~l~~~~ 193 (199)
T 3kh6_A 161 SSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRD 193 (199)
T ss_dssp HHHCSSCSCCEEEEEESSTHHHHHHHHHHHTTC
T ss_pred HHhcCCCCCCEEEEEECCHHHHHHHHHHHHhcc
Confidence 85 47899999999999999999998754
No 12
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=99.97 E-value=9.3e-31 Score=176.66 Aligned_cols=103 Identities=19% Similarity=0.253 Sum_probs=92.8
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCC--cHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 78 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~ 78 (110)
+|++|++ +||||||+|||.|.++.. +.+.|++||+++|++|+++|++|||||+||||++|||++++|+.|.+.+.
T Consensus 56 ~a~iT~~---~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~~i~~~l~ 132 (168)
T 3gqe_A 56 KARLVKG---AAKHIIHAVGPNFNKVSEVEGDKQLAEAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQSLNHLLT 132 (168)
T ss_dssp CEEEECC---TTCCEEEEECCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHHHHHHHHH
T ss_pred cEEEEcC---CCCEEEEcCCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHHHHHHHHH
Confidence 6889998 499999999999998652 35799999999999999999999999999999999999999998877666
Q ss_pred HHhcCCCEEEEEecChHHHHHHHHHHHH
Q 033840 79 EFANDFKEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 79 ~~~~~l~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
.+-.++.+|+||++|+++++.|++.+.+
T Consensus 133 ~~~~~~~~V~iv~fd~~~~~~~~~~~~~ 160 (168)
T 3gqe_A 133 ALDTTDADVAIYCRDKKWEMTLKEAVAR 160 (168)
T ss_dssp HHTTSCCEEEEEESCHHHHHHHHHHHHH
T ss_pred HCCCCCCeEEEEEcCHHHHHHHHHHHHh
Confidence 6656788999999999999999998865
No 13
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=99.96 E-value=5.2e-30 Score=173.06 Aligned_cols=93 Identities=19% Similarity=0.177 Sum_probs=85.6
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+|++|+|| |+|+||||+|||.|.. ..+.+.|++||+++|+. .+|||||+||||++|||++++|++|++++++
T Consensus 75 ~a~iT~g~-l~~~~VIHtVgP~~~~-~~~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~P~~~aa~i~~~~v~~- 146 (168)
T 3eti_A 75 NAVLFENV-LEHLSVMNAVGPRNGD-SRVEGKLCNVYKAIAKC-----DGKILTPLISVGIFKVKLEVSLQCLLKTVTD- 146 (168)
T ss_dssp EEEEEEEE-ETTEEEEEEECCCTTS-TTHHHHHHHHHHHHHTS-----CSCEEECCTTBSTTCBCHHHHHHHHHHHCCS-
T ss_pred CEEEecCC-CCccEEEEecCCCCCc-chHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-
Confidence 58999999 9999999999999965 35678999999999985 3899999999999999999999999999987
Q ss_pred hcCCCEEEEEecChHHHHHHHHHHH
Q 033840 81 ANDFKEVHFILFTDDIYNVWLKKAK 105 (110)
Q Consensus 81 ~~~l~~I~~v~~~~~~~~~f~~~~~ 105 (110)
++|+||+|++++++.|++.|.
T Consensus 147 ----~~V~~v~f~~~~~~~~~~~l~ 167 (168)
T 3eti_A 147 ----RDLNVFVYTDQERVTIENFFN 167 (168)
T ss_dssp ----SCEEEEECCHHHHHHHHHHHH
T ss_pred ----CeEEEEEcCHHHHHHHHHHhc
Confidence 899999999999999999774
No 14
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=99.94 E-value=1.7e-27 Score=161.60 Aligned_cols=95 Identities=17% Similarity=0.162 Sum_probs=82.9
Q ss_pred eeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 2 LKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 2 a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
|++|.|+.|++++|||+|||.|... .+.+.|++||+++|+ +|++|||||+||||++|||++++|++|+++++.
T Consensus 81 a~iT~G~~l~t~~VIHtVGP~~~~~-~~~~~L~~~y~~~L~----~~~~SIAfPaIstGi~g~P~~~aA~ia~~~v~~-- 153 (176)
T 3ejf_A 81 RLVTPSFVKGIQCVNNVVGPRHGDN-NLHEKLVAAYKNVLV----DGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEG-- 153 (176)
T ss_dssp EEEECCCSTTEEEEEEECCCCTTCS-CHHHHHHHHHHTTCC----TTCCEEEEECCCTTSTTCCHHHHHHHHHHHHTT--
T ss_pred eeecccccccCCEEEEeCCCCCCCc-cHHHHHHHHHHHHHH----cCCcEEEECccccCCCCCCHHHHHHHHHHHhhh--
Confidence 6899999999999999999999653 567899999999998 999999999999999999999999999999973
Q ss_pred cCCCEEEEEecChHHHHHHHHHH
Q 033840 82 NDFKEVHFILFTDDIYNVWLKKA 104 (110)
Q Consensus 82 ~~l~~I~~v~~~~~~~~~f~~~~ 104 (110)
..-++.+..+|++.+++|...+
T Consensus 154 -~~v~v~~~~~D~e~~~~~~~~~ 175 (176)
T 3ejf_A 154 -CTIRVLLFSLSQEHIDYFDVTC 175 (176)
T ss_dssp -CCCEEEEEESCHHHHHHHHHTC
T ss_pred -cceEEEEEcCCHHHHHHHHHHh
Confidence 2234555666788999998754
No 15
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=99.94 E-value=2e-27 Score=162.25 Aligned_cols=92 Identities=22% Similarity=0.343 Sum_probs=80.8
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
||++|++|+|+ ++|||+|||.|..+. +.+.|++||+++ ++++|||||+||||++|||++++|++|++++++
T Consensus 85 ~a~iT~~~~L~-~~VIH~vgP~~~~~~-~~~~L~~~y~~~------~~~~SIAfP~IstGi~G~p~~~aa~i~~~~v~~- 155 (182)
T 2acf_A 85 GSCLLSGHNLA-KKCLHVVGPNLNAGE-DIQLLKAAYENF------NSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRT- 155 (182)
T ss_dssp CEEEEECTTTC-SEEEEECCCCGGGTC-CTTHHHHHHHGG------GGSSEEEECCTTCGGGCCCHHHHHHHHHHHCCS-
T ss_pred cEEEeeCCCCC-ceEEEECCCCCCCCc-hHHHHHHHHHHh------cCCCEEEECCcccCCCCCCHHHHHHHHHHHHhC-
Confidence 68999999996 799999999998643 567999999985 799999999999999999999999999999975
Q ss_pred hcCCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 81 ANDFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 81 ~~~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+|+||+++++ .|++.+++||+
T Consensus 156 -----~V~~v~~d~~---~y~~~l~~~~p 176 (182)
T 2acf_A 156 -----QVYIAVNDKA---LYEQVVMDYLD 176 (182)
T ss_dssp -----EEEEEESCHH---HHHHHHHHHC-
T ss_pred -----cEEEEECCHH---HHHHHHHHhCC
Confidence 9999999987 56666777775
No 16
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=99.94 E-value=6.9e-27 Score=160.51 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=82.7
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+|++|++|+| +|||+|||.|.. .+.+.|++||+++|+. .+|||||+||||++|||++++|+++++++++
T Consensus 103 ~a~iT~~~~L---~VIHtVGP~~~~--~~~~~L~~~y~~~L~~-----~~SIAfPaIstGi~G~P~~~aa~ial~~v~~- 171 (193)
T 3ejg_A 103 TGVMVECDSL---RIFNVVGPRKGK--HERDLLIKAYNTINNE-----QGTPLTPILSCGIFGIKLETSLEVLLDVCNT- 171 (193)
T ss_dssp CEEEEEETTE---EEEEEECCCSST--THHHHHHHHHHHHHHS-----SSCEEECCTTCGGGCCCHHHHHHHHHHHCCS-
T ss_pred CEEEecCCCe---eEEEecCCCCCc--hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-
Confidence 6899999999 999999999965 5778999999999983 3799999999999999999999999999987
Q ss_pred hcCCCEEEEEecChHHHHHHHHHHH
Q 033840 81 ANDFKEVHFILFTDDIYNVWLKKAK 105 (110)
Q Consensus 81 ~~~l~~I~~v~~~~~~~~~f~~~~~ 105 (110)
.+|+||+|+++.+++|++.+.
T Consensus 172 ----~~V~fv~f~~~~~~~~~~~l~ 192 (193)
T 3ejg_A 172 ----KEVKVFVYTDTEVCKVKDFVS 192 (193)
T ss_dssp ----SCEEEEECSHHHHHHHHHHHH
T ss_pred ----CeEEEEEcCHHHHHHHHHHhc
Confidence 599999999999999998764
No 17
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=99.92 E-value=3.2e-25 Score=170.11 Aligned_cols=102 Identities=19% Similarity=0.254 Sum_probs=90.4
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCc--HHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 78 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~--~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~ 78 (110)
+|++|++| .|||||+|||.|+++.+. .++|++||+++|++|.++|++|||||.||||+||||+| .++++++++.
T Consensus 396 ~AkIT~g~---aKyIIHtVGPvw~~g~~~E~~~lLascYrnsLkLA~e~~~kSIAFPLISTGIYG~PKd-al~IAl~~I~ 471 (670)
T 4gua_A 396 TARMTVCL---GKKVIHAVGPDFRKHPEAEALKLLQNAYHAVADLVNEHNIKSVAIPLLSTGIYAAGKD-RLEVSLNCLT 471 (670)
T ss_dssp CEEEEEET---TEEEEEECCCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSSTTTTSC-CHHHHHHHHH
T ss_pred eEEEecCC---CceEEEcCCCCccCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEEccccccCCCCCHH-HHHHHHHHHH
Confidence 68999998 699999999999987643 36899999999999999999999999999999999987 5899999999
Q ss_pred HHhcCC-CEEEEEecChHHHHHHHHHHHH
Q 033840 79 EFANDF-KEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 79 ~~~~~l-~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
+|++.. -+|.++++|++.-+.+++.++.
T Consensus 472 ~fL~~~D~dV~IvcfDKkwe~~Ik~ai~~ 500 (670)
T 4gua_A 472 TALDRTDADVTIYCLDKKWKERIDAALQL 500 (670)
T ss_dssp HHHTTSSCEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEEecChHHHHHHHHHHH
Confidence 999754 4899999999877777766653
No 18
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=99.92 E-value=1.1e-25 Score=152.61 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=82.6
Q ss_pred CeeEccCCCCCCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+|++|++|+| ||||+|||.|... +.+.|++||+++|+. + +|||||+||||++|||++++|++|++++++
T Consensus 82 ~a~iT~~~~l---~VIH~vgP~~~~~--~~~~L~~~y~~~L~~---~--~SIAfP~IstG~~g~p~~~aa~i~~~~v~~- 150 (174)
T 2vri_A 82 AGVMLECEKF---NVFNVVGPRTGKH--EHSLLVEAYNSILFE---N--GIPLMPLLSCGIFGVRIENSLKALFSCDIN- 150 (174)
T ss_dssp CEEEEECSSC---EEEEEECCCSSTT--HHHHHHHHHHHHHHS---S--SCEEEECSSCGGGCCCHHHHHHHHHTSCCC-
T ss_pred eEEEEECCCC---EEEEEcCCCCCcc--hHHHHHHHHHHHHhh---C--CcEEeCccccCCCCCCHHHHHHHHHHHHhh-
Confidence 6899999998 9999999999642 778999999999985 3 499999999999999999999999998866
Q ss_pred hcCCCEEEEEecChHHHHHHHHHHHH
Q 033840 81 ANDFKEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 81 ~~~l~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
++|+|++++++.+++|++.|++
T Consensus 151 ----~~V~~v~f~~~~~~~~~~~l~~ 172 (174)
T 2vri_A 151 ----KPLQVFVYSSNEEQAVLKFLDG 172 (174)
T ss_dssp ----SCEEEEECSHHHHHHHHHHHHT
T ss_pred ----CcEEEEEcCHHHHHHHHHHHhh
Confidence 7899999999999999998865
No 19
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=99.92 E-value=2.5e-25 Score=160.53 Aligned_cols=93 Identities=12% Similarity=0.075 Sum_probs=81.1
Q ss_pred CeeEccCC----------CCCCceEEEecCCCCCCCC---------CcHHHHHHHHHHHHHHHHhCCCceEEecccccCC
Q 033840 1 MLKECRGF----------KLPVSHVIHTVGPVFNFHC---------NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 61 (110)
Q Consensus 1 ~a~iT~~g----------~L~~k~IiH~v~P~~~~~~---------~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~ 61 (110)
+|++|++| +|+||||||++||.|.++. .+.+.|++||+++|+.| +++++|||||+||||+
T Consensus 119 ~a~iT~~~~~~~~~~~~~~L~~k~VIHtvgp~~~~~~~~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv 197 (284)
T 1njr_A 119 SATVVDLQRCLEEKTIECRDGIRYIIHVPTVVAPSAPIFNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGY 197 (284)
T ss_dssp CCEEEEGGGGGCC----CCTTEEEEEECCCBSCSSSCSCCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCST
T ss_pred eEEEEECCcccccccchhcCCCCEEEEeCCCccCCCCCcccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccC
Confidence 58999999 9999999999999998752 14589999999999999 9999999999999999
Q ss_pred CccChHHHHHHHHHHHHHHhcC------C-CEEEEEecCh
Q 033840 62 SQYPPDEAATIAISTVKEFAND------F-KEVHFILFTD 94 (110)
Q Consensus 62 ~g~p~~~~a~~~~~~i~~~~~~------l-~~I~~v~~~~ 94 (110)
+|||++++|++|+++++.|++. + +.|+||.+++
T Consensus 198 ~G~P~~~aA~i~~~av~~f~~~~~~s~~~~~~vi~~~~~~ 237 (284)
T 1njr_A 198 AGVPPIISCKSMAFALRLYMAGDHISKELKNVLIMYYLQY 237 (284)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCcccccceEEEEEECHH
Confidence 9999999999999999999852 1 3466666643
No 20
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.78 E-value=4.9e-19 Score=117.17 Aligned_cols=75 Identities=9% Similarity=0.102 Sum_probs=66.9
Q ss_pred CeeEccCCCCCCceEEEecCCC-CCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKE 79 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~-~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~ 79 (110)
++++|+++ +++|||++||. |.. ..+.+.|++|++++++.|++++++|||||+||||++|+|.++++++|.+.+.+
T Consensus 64 ~a~it~~~---~~~Vih~v~~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~~~~~ 139 (149)
T 2eee_A 64 EVAVLKRD---GRYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 139 (149)
T ss_dssp CEEEEESS---SSEEEEEEEESSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHHHHTT
T ss_pred cEEEEEcC---CCEEEEEEecCCCCC-CCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHhcc
Confidence 57888875 69999999998 654 45678999999999999999999999999999999999999999999877653
No 21
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.78 E-value=8.9e-19 Score=117.24 Aligned_cols=75 Identities=9% Similarity=0.102 Sum_probs=67.1
Q ss_pred CeeEccCCCCCCceEEEecCCC-CCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKE 79 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~-~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~ 79 (110)
++++|+++ .++|||++||. |.+ ..+.+.|++|++++++.|++++++|||||+||||++|+|.+++++++.+.+.+
T Consensus 75 ~a~it~~~---~~~Vih~vg~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~~~~~ 150 (160)
T 2jyc_A 75 EVAVLKRD---GRYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 150 (160)
T ss_dssp CEEEEEET---TEEEEEEECSSSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHHHHTT
T ss_pred cEEEEecC---CcEEEEEecCCCCCC-CChHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 57788875 69999999998 654 45678999999999999999999999999999999999999999999887754
No 22
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.66 E-value=2.7e-16 Score=104.80 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=64.4
Q ss_pred CeeEccCCCCCCceEEEecCCC-CCCCC-----CcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHH
Q 033840 1 MLKECRGFKLPVSHVIHTVGPV-FNFHC-----NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAI 74 (110)
Q Consensus 1 ~a~iT~~g~L~~k~IiH~v~P~-~~~~~-----~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~ 74 (110)
++++|+++ +.++|||+++|. |..+. ...+.|++|++++++.|.+++. |||||.||||++|+|.+++++++.
T Consensus 67 ~~~i~~~~--~~~~Vi~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~~v~~ii~ 143 (158)
T 2fg1_A 67 AVQFVNVE--NKLYVANMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWELMEQIIK 143 (158)
T ss_dssp CEEEEEEE--TTEEEEEEEEESSSSCCTTCCCSBCHHHHHHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHHHHHHHHH
T ss_pred cEEEEecC--CCeEEEEEEEEcccCCCCCCCccccHHHHHHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHHHHHHHHH
Confidence 57888874 249999999998 76432 1678999999999999999997 999999999999999999999876
Q ss_pred HHHHH
Q 033840 75 STVKE 79 (110)
Q Consensus 75 ~~i~~ 79 (110)
+.+.+
T Consensus 144 ~~l~~ 148 (158)
T 2fg1_A 144 EELIT 148 (158)
T ss_dssp HHTGG
T ss_pred HHhcc
Confidence 66543
No 23
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=99.57 E-value=1.2e-14 Score=104.46 Aligned_cols=93 Identities=16% Similarity=0.238 Sum_probs=80.1
Q ss_pred eEEEecCCCCCCC---C---CcHHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHH---HHhcCC
Q 033840 14 HVIHTVGPVFNFH---C---NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK---EFANDF 84 (110)
Q Consensus 14 ~IiH~v~P~~~~~---~---~~~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~---~~~~~l 84 (110)
-||.++.|+|..- . ...+.|++.++++|+.|.++|+++|++|++|||+||+|++++|+++.+.+. +|...+
T Consensus 171 ~vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCGvfgnpp~~VA~~~~~vL~~~~~f~~~f 250 (277)
T 3sig_A 171 AFLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCGVFGNDPAQVAETFAGLLLDGGPFAGRF 250 (277)
T ss_dssp EEEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHSTTCTTTTTC
T ss_pred EEEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCcCCCCHHHHHHHHHHHHhhcchhcCCc
Confidence 3888999987531 1 135789999999999999999999999999999999999999999999998 466689
Q ss_pred CEEEEEecCh----HHHHHHHHHHHH
Q 033840 85 KEVHFILFTD----DIYNVWLKKAKE 106 (110)
Q Consensus 85 ~~I~~v~~~~----~~~~~f~~~~~~ 106 (110)
++|+|+++++ ..+++|.+.|.+
T Consensus 251 ~~VvFAv~d~~~~~~n~~~F~~~F~~ 276 (277)
T 3sig_A 251 AHVVFAVWDTAPGAPRHAAFARRFGS 276 (277)
T ss_dssp SEEEEECCCCSTTCHHHHHHHHHC--
T ss_pred eEEEEEEecCCCcchHHHHHHHHHhh
Confidence 9999999987 689999998765
No 24
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.63 E-value=4.3 Score=26.48 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=27.3
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
.++.|||++++.|..... .+.-.....+.++.|.+.|.+.+.+-
T Consensus 67 ~~d~vi~~a~~~~~~~~~-~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 67 GADAVISAFNPGWNNPDI-YDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp TCSEEEECCCC------C-CSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEeCcCCCCChhH-HHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 478999999998765321 11234457788888888998777663
No 25
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=81.35 E-value=3.3 Score=28.49 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
-+.++++++.|.+.|++.+.+=+++|++..=|.+++. .+++-+.+++.
T Consensus 33 ~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev~-~Lm~l~~~~l~ 80 (227)
T 2vg0_A 33 AAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELA-ALIEIITDVVE 80 (227)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHHH-HHHHHHHHHHH
Confidence 4678888899999999999999999999999999884 44466666653
No 26
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=73.63 E-value=5.9 Score=27.34 Aligned_cols=47 Identities=19% Similarity=0.170 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
.+.++++++.|.+.|++.+.+=++||-+..=|++++.-.| +-+.+++
T Consensus 36 ~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm-~L~~~~l 82 (225)
T 3ugs_B 36 VKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIF-ELLDRCL 82 (225)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHH-HHHHHHH
Confidence 3466778888999999999999999999999999987664 5555554
No 27
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=72.51 E-value=16 Score=23.47 Aligned_cols=42 Identities=10% Similarity=0.071 Sum_probs=30.5
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
.++.|||++|+.|.... ...-....++.++.|.+.| ..+.+.
T Consensus 62 ~~d~vi~~ag~~~~~~~--~~~n~~~~~~l~~a~~~~~-~~~v~~ 103 (224)
T 3h2s_A 62 SVDAVVDALSVPWGSGR--GYLHLDFATHLVSLLRNSD-TLAVFI 103 (224)
T ss_dssp TCSEEEECCCCCTTSSC--THHHHHHHHHHHHTCTTCC-CEEEEE
T ss_pred cCCEEEECCccCCCcch--hhHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 47899999999876532 2344456788899999989 666554
No 28
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=69.82 E-value=7.3 Score=27.39 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
.+.++++++.|.+.|++.+.+=++||-+..=|.+++.-.| +-+.+++
T Consensus 54 ~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm-~L~~~~l 100 (256)
T 4h8e_A 54 MQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIM-NLPVNFL 100 (256)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHHH-HHHHHHH
Confidence 3466788888999999999999999999999999887654 3334433
No 29
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=62.58 E-value=12 Score=26.68 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHH
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIA 73 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~ 73 (110)
.+.++++++.|.+.|++.+.+=+++|.+.+=|.+++...|
T Consensus 85 ~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm 124 (284)
T 2vg3_A 85 EAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLM 124 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHH
Confidence 3678889999999999999999999999999999876664
No 30
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=62.35 E-value=23 Score=21.50 Aligned_cols=26 Identities=8% Similarity=-0.015 Sum_probs=19.0
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 71 vvk~~vyl~d~~~~~~~n~v~~~~f~ 96 (125)
T 3l7q_A 71 VVKTTCFLSDIDDFVPFNEVYATAFK 96 (125)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred EEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 44566666677778888888888875
No 31
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=61.86 E-value=7.7 Score=27.21 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 33 LRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 33 L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
=.+.++++++.|.+.|++.+.+=++||.+..=|++++.-.| +-+.+++
T Consensus 46 G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm-~L~~~~l 93 (253)
T 3sgv_B 46 GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALM-ELFVWAL 93 (253)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC-----------CHHHH-HHHHTTH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHH-HHHHHHH
Confidence 34567788888999999999999999999999998887654 4444444
No 32
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=61.70 E-value=25 Score=21.60 Aligned_cols=26 Identities=8% Similarity=-0.128 Sum_probs=19.2
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 68 Vvk~tvyl~d~~df~~~n~v~~~~f~ 93 (128)
T 3kjj_A 68 VLDAVIYLRDMGDYAEMNGVWDAWVA 93 (128)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHSC
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 44566666677778888888888885
No 33
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=61.16 E-value=13 Score=23.85 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=29.5
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 56 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~ 56 (110)
.++.|||++|+..... ..-....++.++.+.+.|...+.+..
T Consensus 61 ~~d~vi~~ag~~~~~~----~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEA----EKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp TCSEEEECCCSSTTTT----TSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CCCEEEECCcCCcccc----chHHHHHHHHHHHHHhcCCceEEEEe
Confidence 4799999999854321 23445677888888888777776643
No 34
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=61.08 E-value=25 Score=21.38 Aligned_cols=26 Identities=0% Similarity=-0.047 Sum_probs=18.3
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 71 vvk~~vyl~d~~~~~~~n~~~~~~f~ 96 (128)
T 1qu9_A 71 IVKTTVFVKDLNDFATVNATYEAFFT 96 (128)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 44556666677778888888888774
No 35
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=58.86 E-value=9.4 Score=26.57 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHH
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIA 73 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~ 73 (110)
.+.++++++.|.+.|++.+.+=+++|.+..=|.+++...|
T Consensus 45 ~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm 84 (245)
T 2d2r_A 45 VKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLM 84 (245)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECC----------CHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHH
Confidence 4678889999999999999999999999999987776554
No 36
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=58.31 E-value=26 Score=23.88 Aligned_cols=44 Identities=18% Similarity=0.053 Sum_probs=29.8
Q ss_pred CCceEEEecCCCCCCCC-CcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~-~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++...... ...+.=....++.++.|.+.|.+.+-+
T Consensus 62 ~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~ 106 (311)
T 3m2p_A 62 DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVY 106 (311)
T ss_dssp TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 58999999987544321 122233345678899999999887766
No 37
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=57.53 E-value=30 Score=21.97 Aligned_cols=44 Identities=9% Similarity=0.095 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHhc-------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 66 PDEAATIAISTVKEFAN-------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 66 ~~~~a~~~~~~i~~~~~-------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
.++.++.+++-+..-++ .+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 70 ~~~Qt~~~l~nl~a~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 120 (153)
T 3vcz_A 70 IAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFD 120 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhC
Confidence 34444444454444443 344566666777778888888888874
No 38
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=56.00 E-value=35 Score=23.10 Aligned_cols=62 Identities=10% Similarity=-0.023 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFT 93 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~~l~~I~~v~~~ 93 (110)
+...+.++++++.|.+.|.+.|..|..|. ..+.+.++.-+.+.+.+++..+..++|++++.+
T Consensus 109 ~~~~~~~~~~i~~A~~lG~~~v~~~~~g~-~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn 170 (290)
T 2zvr_A 109 KKAIERVVKHTEVAGMFGALVIIGLVRGR-REGRSYEETEELFIESMKRLLELTEHAKFVIEP 170 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEESGGGCC-CTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCC-CCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEe
Confidence 45667889999999999999998553222 224456666666777776665422226666654
No 39
>3lyb_A Putative endoribonuclease; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.66A {Klebsiella pneumoniae}
Probab=55.88 E-value=15 Score=23.71 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=18.9
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 94 Vvkvtvyl~d~~df~~~n~v~~~~f~ 119 (165)
T 3lyb_A 94 VIKLVQYFRNLDHFPYYSRVRKLFYP 119 (165)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHCS
T ss_pred hEEEEEEECCHHHhHHHHHHHHHHcC
Confidence 34566666677778888888888875
No 40
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=55.49 E-value=33 Score=23.64 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=27.1
Q ss_pred CCceEEEecCCCCCCCCCcH-HHH---HHHHHHHHHHHHhCC-CceEEec
Q 033840 11 PVSHVIHTVGPVFNFHCNPE-DIL---RSAYKNCLSVGKANN-IQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~-~~L---~~~~~~~L~~a~~~~-~~sIa~P 55 (110)
.++.|||.++|.-....+.. +.+ -....++++.|.+.+ .+.|-+.
T Consensus 77 ~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~ 126 (337)
T 2c29_D 77 GCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFT 126 (337)
T ss_dssp TCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred CCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence 36899999987521111111 122 244568888887776 7777664
No 41
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=53.58 E-value=34 Score=20.80 Aligned_cols=27 Identities=7% Similarity=0.089 Sum_probs=19.8
Q ss_pred CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 83 DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 83 ~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++-++.+.+.+.+.+..+.+.+.++|+
T Consensus 73 ~vvk~~vyl~d~~d~~~~n~~~~~~f~ 99 (129)
T 1jd1_A 73 RVVKVNIFLADINHFAEFNSVYAKYFN 99 (129)
T ss_dssp GEEEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred HeEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 344566667777788888888888885
No 42
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=53.33 E-value=13 Score=25.92 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHH
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATI 72 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~ 72 (110)
.+.++++++.|.+.|++.+.+=+++|.+..=|.+++.-.
T Consensus 47 ~~~l~~iv~~c~~~GI~~lTlYaFStENwkRp~~EV~~L 85 (253)
T 3qas_B 47 AKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSAL 85 (253)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCC-------------
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEecCcccCCCHHHHHHH
Confidence 467888999999999999999999999998888777544
No 43
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=53.02 E-value=35 Score=20.59 Aligned_cols=26 Identities=0% Similarity=-0.037 Sum_probs=17.6
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 70 vvk~~vyl~d~~~~~~~n~~~~~~f~ 95 (124)
T 1qd9_A 70 VVKATVFIADMEQFAEVNEVYGQYFD 95 (124)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred EEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 34555556666677778888877774
No 44
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=51.83 E-value=38 Score=20.58 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=18.2
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 74 vvk~~vyl~d~~~~~~~n~~~~~~f~ 99 (128)
T 1x25_A 74 VAMAFVFLKDMNMFNDFNSVYAEYFK 99 (128)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 34555666666778888888888875
No 45
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=51.78 E-value=38 Score=20.62 Aligned_cols=26 Identities=15% Similarity=-0.019 Sum_probs=18.7
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 63 Vvk~~vyl~d~~df~~~n~v~~~~f~ 88 (126)
T 2ewc_A 63 VVQMDCLFRDVWNIPVMEKMIKERFN 88 (126)
T ss_dssp EEEEEEEESSGGGHHHHHHHHHHHST
T ss_pred EEEEEEEECChhHHHHHHHHHHHHcC
Confidence 34556666677778888888888875
No 46
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=51.73 E-value=32 Score=23.12 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=28.7
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 56 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~ 56 (110)
.++.|||++++.... ..-....++.++.|.+.|.+.|.+-.
T Consensus 65 ~~d~vi~~a~~~~~~-----~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 65 GMDTVVFIPSIIHPS-----FKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp TCSEEEECCCCCCSH-----HHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEeCCCCccc-----hhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 478999999875321 12234567889999999988777643
No 47
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=51.43 E-value=80 Score=24.20 Aligned_cols=53 Identities=8% Similarity=0.091 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEE----ecc-cccCCCccChHHHHHHHHHHHHHHhc
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIA----FPA-ISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa----~P~-i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
+..++..++.+|+.+.+.|+.-+= ||. ..+...|+|.+++.+++.+++.++.+
T Consensus 195 ~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~ 252 (508)
T 3lgd_A 195 APVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVE 252 (508)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 467899999999999999977553 333 34434579999999999999998874
No 48
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=50.96 E-value=42 Score=20.89 Aligned_cols=26 Identities=8% Similarity=-0.000 Sum_probs=18.5
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 84 Vvk~tvyl~d~~df~~~n~v~~~~f~ 109 (140)
T 2b33_A 84 VVKVTVFTTSMDYFQRVNEVYSRYFG 109 (140)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred EEEEEEEECCchhHHHHHHHHHHHCC
Confidence 34555666666778888888888875
No 49
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=50.88 E-value=38 Score=20.36 Aligned_cols=27 Identities=11% Similarity=0.170 Sum_probs=19.6
Q ss_pred CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 83 DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 83 ~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++-++.+.+.+.+.+..+.+.+.++|+
T Consensus 65 ~vvk~~vyl~d~~df~~~n~~~~~~f~ 91 (123)
T 2cwj_A 65 DIVKVTVYITDISRFSEFNEVYREYFN 91 (123)
T ss_dssp GCCEEEEEESSSSHHHHHHHHHHTTCC
T ss_pred HeEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 455666666666778888888888775
No 50
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=50.40 E-value=40 Score=20.41 Aligned_cols=26 Identities=8% Similarity=0.046 Sum_probs=19.0
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 74 vvk~~vyl~d~~~~~~~~~v~~~~f~ 99 (127)
T 3r0p_A 74 IVKLNVYLTDLANFPIVNEVMGQYFQ 99 (127)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 44566666677778888888888875
No 51
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=50.02 E-value=41 Score=20.42 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=18.3
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 62 Vvk~tvyl~d~~df~~~n~v~~~~f~ 87 (124)
T 3gtz_A 62 ILDATIFLSDKADFAAMNKAWDAWVV 87 (124)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHSC
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 44555666666678888888888875
No 52
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=49.67 E-value=33 Score=21.52 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHHhc-------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 65 PPDEAATIAISTVKEFAN-------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 65 p~~~~a~~~~~~i~~~~~-------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+.++.++..++-+..-++ .+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 63 d~~~Qt~~~l~ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 114 (143)
T 3k0t_A 63 GIEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFS 114 (143)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 445555555555555543 234566666777778888888888775
No 53
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=49.51 E-value=42 Score=20.55 Aligned_cols=26 Identities=8% Similarity=-0.052 Sum_probs=19.0
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 79 vvk~~vyl~d~~~f~~~n~v~~~~f~ 104 (134)
T 3v4d_A 79 VTFNSIFITDWKNYAAINEIYAEFFP 104 (134)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred eEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 44566666677778888888888875
No 54
>3i7t_A RV2704, putative uncharacterized protein; siras, YJGF/YER057C/UK114, homotrimer, quick SOAK NAI deriva unknown function; 1.93A {Mycobacterium tuberculosis}
Probab=49.33 E-value=44 Score=21.15 Aligned_cols=27 Identities=4% Similarity=-0.076 Sum_probs=19.0
Q ss_pred CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 83 DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 83 ~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
.+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 65 dVvk~tvyl~d~~df~~~n~v~~~~f~ 91 (149)
T 3i7t_A 65 DVVRTRIYVTDISRWREVGEVHAQAFG 91 (149)
T ss_dssp GEEEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred HEEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 344566666676778888888888875
No 55
>3m1x_A Putative endoribonuclease L-PSP; structural genomics, seattle structural genomics center for infectious disease, ssgcid, unknown function; HET: FLC; 1.20A {Entamoeba histolytica} PDB: 3m4s_A 3mqw_A*
Probab=48.53 E-value=43 Score=21.05 Aligned_cols=45 Identities=11% Similarity=0.099 Sum_probs=30.8
Q ss_pred ChHHHHHHHHHHHHHHhc-------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 65 PPDEAATIAISTVKEFAN-------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 65 p~~~~a~~~~~~i~~~~~-------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+.++.++..++-+..-++ ++-++.+.+.+.+.+..+.+.+.++|+
T Consensus 69 d~~~Q~~~~l~nl~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~fg 120 (148)
T 3m1x_A 69 TIEEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFG 120 (148)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 345666666666666553 234566667777788999999988885
No 56
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=48.39 E-value=40 Score=23.55 Aligned_cols=43 Identities=14% Similarity=0.280 Sum_probs=27.5
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++.-.........+. ....++++.|.+.+.+ +-+
T Consensus 90 ~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~ 135 (362)
T 3sxp_A 90 HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIY 135 (362)
T ss_dssp CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEE
T ss_pred CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEE
Confidence 589999999864321112222333 4566888889888887 444
No 57
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=48.18 E-value=42 Score=23.26 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhCCCceEEecccccCCCccChHHHH
Q 033840 34 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAA 70 (110)
Q Consensus 34 ~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a 70 (110)
.+.++++++.|.+.|++.+.+=+++|.+..=|++++.
T Consensus 50 ~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~ 86 (249)
T 1f75_A 50 MQTVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVN 86 (249)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEC------------C
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecccccCCCHHHHH
Confidence 4678888999999999999999999999988887764
No 58
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=47.22 E-value=48 Score=20.40 Aligned_cols=26 Identities=12% Similarity=0.042 Sum_probs=18.8
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 75 vvk~~vyl~d~~d~~~~n~~~~~~f~ 100 (136)
T 1qah_A 75 VVKTTVLLADINDFGTVNEIYKTYFQ 100 (136)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred EEEEEEEEccCccHHHHHHHHHHHcC
Confidence 44556666677778888888888874
No 59
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=46.90 E-value=60 Score=21.43 Aligned_cols=51 Identities=6% Similarity=-0.001 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
+.....++++++.|.+.|.+.|.++.=.....+.+.++.-+.+.+.+++..
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~ 129 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVL 129 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 445577889999999999999988641111123455666666666666554
No 60
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=46.71 E-value=48 Score=21.05 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhc-------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 67 DEAATIAISTVKEFAN-------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 67 ~~~a~~~~~~i~~~~~-------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++.++..++-+..-++ .+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 74 ~~Qt~~~l~Ni~a~L~~aG~~l~dVVkvtvyl~d~~df~~~n~v~~~~f~ 123 (153)
T 3quw_A 74 SEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFH 123 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 4444444444444442 344566667777788889988888885
No 61
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=46.42 E-value=29 Score=23.28 Aligned_cols=44 Identities=18% Similarity=0.028 Sum_probs=27.9
Q ss_pred CCceEEEecCCCCC---CCCCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFN---FHCNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~---~~~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++.-. ...+..+.+ .....+.++.|.+.|.+.+.+
T Consensus 61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~ 110 (319)
T 4b8w_A 61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVS 110 (319)
T ss_dssp CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999999987421 011112222 234568889999999887765
No 62
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=46.40 E-value=4.1 Score=27.72 Aligned_cols=44 Identities=14% Similarity=0.009 Sum_probs=26.9
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++.........+.=.....+.++.|.+.+.+.+.+
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~ 106 (286)
T 3gpi_A 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFF 106 (286)
T ss_dssp CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 48999999987432211100111235678888888888877766
No 63
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=45.52 E-value=11 Score=26.17 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=36.4
Q ss_pred EEEecCCCCCCCC--CcHHHHHHHHHHHHHHHHhCCCceEEe---c--ccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 15 VIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQYIAF---P--AISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 15 IiH~v~P~~~~~~--~~~~~L~~~~~~~L~~a~~~~~~sIa~---P--~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
.|-|+|-...+.. ...+.+..-++.+|.......++.+.+ | +||||.. +..+-++.+...||+++.
T Consensus 117 pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~--Atpe~aqevh~~IR~~l~ 189 (244)
T 2v5b_A 117 VIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKV--ATPQQAQEVHELLRRWVR 189 (244)
T ss_dssp EEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGGGGEEEEECCHHHHSSSCC--CCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCC--CCHHHHHHHHHHHHHHHH
Confidence 4556665543211 234455555566663322222333444 6 8888854 445556667888988764
No 64
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=45.50 E-value=48 Score=22.83 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=28.7
Q ss_pred CCceEEEecCCCCCCCCCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++...........+ -....++++.|.+.+.+.+.+
T Consensus 77 ~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~ 123 (347)
T 4id9_A 77 GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVF 123 (347)
T ss_dssp TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 57899999987543321111122 234568888899999887776
No 65
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=45.27 E-value=34 Score=20.68 Aligned_cols=26 Identities=12% Similarity=0.079 Sum_probs=16.2
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 60 Vvk~tvyl~d~~df~~~n~v~~~~f~ 85 (122)
T 3k12_A 60 VLSVRILLAHREDYAGLNQVWDQWFP 85 (122)
T ss_dssp EEEEEEEESCGGGHHHHHHHHTTTSC
T ss_pred EEEEEEEEcCchHHHHHHHHHHHHhC
Confidence 34455555565667777777777664
No 66
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=45.14 E-value=76 Score=22.17 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=40.4
Q ss_pred CCceEEEecCCCCCCC--CCcHHHHH---HHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 11 PVSHVIHTVGPVFNFH--CNPEDILR---SAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~--~~~~~~L~---~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+++.|||+++...... ....+.++ ....+.++.|.+.|.+.+.+-.=..+.......-.++.+.+.+...
T Consensus 91 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~ 165 (344)
T 2gn4_A 91 GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVS 165 (344)
T ss_dssp TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHH
Confidence 4799999998653110 01112222 2346888889889988776633222233345566677777666443
No 67
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=44.35 E-value=54 Score=20.86 Aligned_cols=43 Identities=9% Similarity=0.111 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHhc-------CCCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 67 DEAATIAISTVKEFAN-------DFKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 67 ~~~a~~~~~~i~~~~~-------~l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++.++..++-+..-++ ++-++.+.+.+.+.+..+.+.+.++|+
T Consensus 79 ~~Qt~~~l~ni~~iL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 128 (156)
T 1xrg_A 79 EEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFS 128 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHEEEEEEEECChHHHHHHHHHHHHHcC
Confidence 3444444444444442 234556666777788888888888875
No 68
>2dyy_A UPF0076 protein PH0854; putative translation initiation inhibitor, trimer, structural genomics, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=44.33 E-value=34 Score=20.71 Aligned_cols=24 Identities=13% Similarity=0.008 Sum_probs=12.8
Q ss_pred EEEEEecChHHHHHHHHHHHHHhc
Q 033840 86 EVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 86 ~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
++.+.+.+.+.+..+.+.+.++|+
T Consensus 74 k~~vyl~d~~~~~~~n~~~~~~f~ 97 (126)
T 2dyy_A 74 KVTVYLKDMNDFAKMNEVYAEYFG 97 (126)
T ss_dssp EEEEEECC-CCTTHHHHHHHHHHT
T ss_pred EEEEEEcCHHHHHHHHHHHHHHcC
Confidence 444444454556666666666664
No 69
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=42.84 E-value=53 Score=19.72 Aligned_cols=26 Identities=4% Similarity=-0.018 Sum_probs=17.7
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+..+.+.+.++|+
T Consensus 70 vvk~~vyl~d~~~~~~~~~~~~~~f~ 95 (124)
T 2cvl_A 70 VVQTTCFLADMEDFPGFNEVYARYFT 95 (124)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 34555556666677888888887774
No 70
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=42.27 E-value=51 Score=22.24 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=28.6
Q ss_pred CCceEEEecCCCC-----CCCCCcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVF-----NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~-----~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++.. .......+ =.....+.++.|.+.|.+.+-+
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~ 116 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVV 116 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEE
Confidence 5789999998652 22112223 3445678899999989877766
No 71
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=41.95 E-value=15 Score=16.07 Aligned_cols=13 Identities=31% Similarity=0.797 Sum_probs=9.7
Q ss_pred CcHHHHHHHHHHH
Q 033840 28 NPEDILRSAYKNC 40 (110)
Q Consensus 28 ~~~~~L~~~~~~~ 40 (110)
.+.++|++|..||
T Consensus 12 sspellrrcldnc 24 (26)
T 2plx_B 12 SSPELLRRCLDNC 24 (26)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcc
Confidence 3567888888776
No 72
>3lme_A Possible translation initiation inhibitor; structural genomics, RPA2473, PSI-2, protein structure initiative; 2.74A {Rhodopseudomonas palustris} SCOP: d.79.1.0
Probab=41.56 E-value=61 Score=19.98 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=16.0
Q ss_pred CCEEEEEecChHHHH-HHHHHHHHHhc
Q 033840 84 FKEVHFILFTDDIYN-VWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~~~~~-~f~~~~~~~~~ 109 (110)
+-++.+.+.+.+.+. .+.+.+.++|+
T Consensus 73 Vvk~~vyl~d~~d~~~~~n~v~~~~f~ 99 (138)
T 3lme_A 73 AVRLTVFVTDVAKYRPVVNKVQKDIWG 99 (138)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEECCHHHHHHHHHHHHHHHcC
Confidence 345555566666664 67777777774
No 73
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=41.20 E-value=77 Score=21.08 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
.+...+.++++++.|.+.|.+.|.+.. | ...+.+.++.-+.+.+.+++..+
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~-g-~~~~~~~~~~~~~~~~~l~~l~~ 138 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMS-G-ITEGLDRKACEETFIENFRYAAD 138 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCB-C-BCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcc-C-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 456667889999999999999998842 1 12345666666677776666553
No 74
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=40.92 E-value=77 Score=21.01 Aligned_cols=41 Identities=20% Similarity=0.408 Sum_probs=28.2
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEecc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 56 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~ 56 (110)
.++.|||++++.+. . +.--....+.++.|.+.|.+.+-+..
T Consensus 66 ~~d~vi~~a~~~~~----~-~~n~~~~~~l~~a~~~~~~~~~v~~S 106 (287)
T 2jl1_A 66 GVSKLLFISGPHYD----N-TLLIVQHANVVKAARDAGVKHIAYTG 106 (287)
T ss_dssp TCSEEEECCCCCSC----H-HHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCEEEEcCCCCcC----c-hHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 37999999997532 1 11224567888999889987776643
No 75
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=40.39 E-value=95 Score=21.89 Aligned_cols=65 Identities=14% Similarity=0.075 Sum_probs=41.1
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
.|+.|||++|.....+....+.+. ..+++..+.+.+.+.+.+-+ +..-|.+..+.++.+.++++.
T Consensus 76 gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~vi------v~SNPv~~~~~~~t~~~~~~~ 143 (326)
T 1smk_A 76 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVN------LISNPVNSTVPIAAEVFKKAG 143 (326)
T ss_dssp TCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEE------ECCSSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------EECCchHHHHHHHHHHHHHcc
Confidence 589999999854433322111222 45666777777777665554 234788988888878777764
No 76
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=40.26 E-value=60 Score=23.15 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHHHHHHhCCCceE--Ee-cccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 29 PEDILRSAYKNCLSVGKANNIQYI--AF-PAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 29 ~~~~L~~~~~~~L~~a~~~~~~sI--a~-P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
.++.++...+..++.+.+.|+.-+ -| |-..+ ..|++.++..+.+.+.++++.+
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~-~~gl~~~~~v~~v~~~~~~a~~ 127 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHT-DRGIPFEVVLAGIRAALRDGEK 127 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHH-TTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhc-cCCCCHHHHHHHHHHHHHHHHh
Confidence 467899999999999999998875 33 55544 4689999999999999998865
No 77
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=40.11 E-value=61 Score=19.64 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=18.9
Q ss_pred CCEEEEEecCh-HHHHHHHHHHHHHhc
Q 033840 84 FKEVHFILFTD-DIYNVWLKKAKELLQ 109 (110)
Q Consensus 84 l~~I~~v~~~~-~~~~~f~~~~~~~~~ 109 (110)
+-++.+.+.+. +.+..+.+.+.++|+
T Consensus 74 vvk~~vyl~d~~~~~~~~~~~~~~~f~ 100 (131)
T 1pf5_A 74 IIDVTSFHTDPENQFEDIMTVKNEIFS 100 (131)
T ss_dssp EEEEEEEESSGGGTHHHHHHHHHHHSC
T ss_pred EEEEEEEEcCcHHhHHHHHHHHHHHcC
Confidence 34555666666 778888888888884
No 78
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=39.80 E-value=74 Score=21.29 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=24.4
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQ 50 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~ 50 (110)
+++.|||++++.........+.+. ....+.++.|.+.|.+
T Consensus 68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 110 (310)
T 1eq2_A 68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP 110 (310)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC
T ss_pred CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 589999999875432112222222 3456788888887773
No 79
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=39.29 E-value=1.1e+02 Score=22.24 Aligned_cols=54 Identities=11% Similarity=0.280 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHHHHHHhCCCceEE--e-cccccCC-----------CccChHHHHHHHHHHHHHHhc
Q 033840 29 PEDILRSAYKNCLSVGKANNIQYIA--F-PAISCGV-----------SQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 29 ~~~~L~~~~~~~L~~a~~~~~~sIa--~-P~i~tG~-----------~g~p~~~~a~~~~~~i~~~~~ 82 (110)
+.+.++...+..++.+.+.|+.-+= | |-..+.. .|++.++..+.+++.+++..+
T Consensus 72 ~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~ 139 (367)
T 3iar_A 72 CREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGER 139 (367)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999977653 3 6555533 489999999999999988765
No 80
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=39.01 E-value=92 Score=21.34 Aligned_cols=47 Identities=9% Similarity=0.118 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
+.....++++++.|.+.|++.|.+|....+ +.++.-+.+.+.+++..
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~----~~~~~~~~~~~~l~~l~ 150 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQPMMPTI----TTHDEAKLVCDIFNQAS 150 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCCC----CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCCC----CCHHHHHHHHHHHHHHH
Confidence 567788999999999999999999854321 23444455555555544
No 81
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=38.95 E-value=48 Score=22.82 Aligned_cols=45 Identities=13% Similarity=-0.023 Sum_probs=27.0
Q ss_pred CCceEEEecCCCCCCCC--Cc---HHHHHHHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHC--NP---EDILRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~---~~~L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
+++.|||++++...... .. .+.=.....+.++.|.+.|.+.+.+.
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~ 147 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQV 147 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEE
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 37899999987543211 11 11222345788899999998877663
No 82
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.93 E-value=82 Score=20.72 Aligned_cols=50 Identities=10% Similarity=0.224 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
+...+.++++++.|.+.|.+.|.+.. +.+..+++.++.-+.+.+.+++..
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~~~~~~~~~~~~~~~l~~l~ 129 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVP-LVTEQKIVKEEIKKSSVDVLTELS 129 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEC-CBCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEec-CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45567788999999999999998831 222224676666666666666654
No 83
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=38.14 E-value=30 Score=24.02 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=25.6
Q ss_pred CceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhC--CCceEE
Q 033840 12 VSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN--NIQYIA 53 (110)
Q Consensus 12 ~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~--~~~sIa 53 (110)
++.|||++++.........+.=.....+.++.|.+. +.+.+.
T Consensus 73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v 116 (364)
T 2v6g_A 73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116 (364)
T ss_dssp CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence 899999998763211011112224567888888877 666664
No 84
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=37.98 E-value=80 Score=21.30 Aligned_cols=44 Identities=11% Similarity=0.106 Sum_probs=24.9
Q ss_pred CCceEEEecCCCCCCCCC-cHHHH---HHHHHHHHHHHHhC-CCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCN-PEDIL---RSAYKNCLSVGKAN-NIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~-~~~~L---~~~~~~~L~~a~~~-~~~sIa~ 54 (110)
.++.|||+++|.-....+ ..+.+ -....++++.|.+. +.+.|-+
T Consensus 74 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~ 122 (322)
T 2p4h_X 74 GCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122 (322)
T ss_dssp TCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEE
T ss_pred CCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 368999999874111001 11122 24456788888776 6777665
No 85
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=37.31 E-value=74 Score=19.75 Aligned_cols=42 Identities=14% Similarity=0.186 Sum_probs=27.8
Q ss_pred CceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEec
Q 033840 12 VSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 12 ~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
++.|||++++........ .-.....+.++.+.+.+.+.+.+.
T Consensus 68 ~d~vi~~a~~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 68 QDAVIVLLGTRNDLSPTT--VMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp CSEEEECCCCTTCCSCCC--HHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEECccCCCCCCccc--hHHHHHHHHHHHHHHhCCCeEEEE
Confidence 689999998754322122 223456778888888888777663
No 86
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=36.95 E-value=1.1e+02 Score=21.43 Aligned_cols=57 Identities=18% Similarity=0.021 Sum_probs=34.7
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHH
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAI 74 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~ 74 (110)
.|+.|||++|..-..+....+.+. ..+++.++.+.+.+ +.+-+ +..-|.+..+.++.
T Consensus 74 gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vl------v~SNPv~~~t~~~~ 133 (313)
T 1hye_A 74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF------VITNPVDVMTYKAL 133 (313)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE------ECSSSHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEE------EecCcHHHHHHHHH
Confidence 489999999864433332222222 34567777777777 65555 33467777766663
No 87
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=36.77 E-value=47 Score=23.48 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=27.2
Q ss_pred CCceEEEecCCCCCC---CCCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNF---HCNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~---~~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++.... .....+.+ .....+.++.|.+.+.+.+.+
T Consensus 93 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~ 142 (379)
T 2c5a_A 93 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 142 (379)
T ss_dssp TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 478999999875321 11111222 234568888888888876665
No 88
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=35.60 E-value=30 Score=22.53 Aligned_cols=42 Identities=7% Similarity=0.106 Sum_probs=27.0
Q ss_pred CCceEEEecCCCCCCCCCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++|+..... ..+.+ .....+.++.|.+.+.+.|.+
T Consensus 84 ~~D~vi~~ag~~~~~~--~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 128 (236)
T 3e8x_A 84 SIDAVVFAAGSGPHTG--ADKTILIDLWGAIKTIQEAEKRGIKRFIM 128 (236)
T ss_dssp TCSEEEECCCCCTTSC--HHHHHHTTTHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEECCCCCCCCC--ccccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 5899999999764321 11111 133567788888888877766
No 89
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=35.42 E-value=96 Score=20.53 Aligned_cols=61 Identities=8% Similarity=0.130 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILF 92 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~~l~~I~~v~~ 92 (110)
+...+.++++++.|.+.|.+.|.+.. |......+.++.-+.+.+.+++....-..|++++.
T Consensus 85 ~~~~~~~~~~i~~A~~lGa~~v~~~~-g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lE 145 (285)
T 1qtw_A 85 EKSRDAFIDEMQRCEQLGLSLLNFHP-GSHLMQISEEDCLARIAESINIALDKTQGVTAVIE 145 (285)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECC-CBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECc-CCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEe
Confidence 34556788999999999999997632 21222336676666667777665432123455443
No 90
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=35.42 E-value=83 Score=23.00 Aligned_cols=54 Identities=22% Similarity=0.276 Sum_probs=42.7
Q ss_pred cHHHHHHHHHHHHHHHHhCCCceEE--e-cccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 29 PEDILRSAYKNCLSVGKANNIQYIA--F-PAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 29 ~~~~L~~~~~~~L~~a~~~~~~sIa--~-P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
..+.++...+.+++.+.+.|+.-+= | |-..+...|++.+++.+.+++.+++..+
T Consensus 90 t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~ 146 (380)
T 4gxw_A 90 RPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAAR 146 (380)
T ss_dssp SHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 3568889999999999999966554 4 5555556789999999999999988765
No 91
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=34.87 E-value=30 Score=25.70 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=26.6
Q ss_pred ceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 033840 13 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 49 (110)
Q Consensus 13 k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~ 49 (110)
+||+|+- |.++.- ...+.|+.=|.+.|+.+.+.|+
T Consensus 159 DYIF~~H-P~~Qk~-p~~~rL~~WY~~mL~kg~~~gi 193 (380)
T 3biy_A 159 DYIFHCH-PPDQKI-PKPKRLQEWYKKMLDKAVSERI 193 (380)
T ss_dssp CSSSSSC-CTTCCC-CCHHHHHHHHHHHHHHHHHTTS
T ss_pred ceEEeeC-ccccCC-CCcHHHHHHHHHHHHHHHHcCe
Confidence 6777776 444432 3467999999999999999885
No 92
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=34.55 E-value=41 Score=23.57 Aligned_cols=66 Identities=15% Similarity=0.054 Sum_probs=35.8
Q ss_pred CCceEEEecCCCCCCCCC-cHHHHHHHHHHHHHHHHhCCCc-eEEecccccCCCccChHHHHHHHHHHH
Q 033840 11 PVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQ-YIAFPAISCGVSQYPPDEAATIAISTV 77 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~-~~~~L~~~~~~~L~~a~~~~~~-sIa~P~i~tG~~g~p~~~~a~~~~~~i 77 (110)
.++.|||++++....... ..+.=....++.++.|.+.|.+ .+-+.. +++.++....-.++.+.+.+
T Consensus 46 ~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S-s~~~~~~~~Y~~sK~~~E~~ 113 (369)
T 3st7_A 46 KADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS-SIQATQDNPYGESKLQGEQL 113 (369)
T ss_dssp HCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE-EGGGGSCSHHHHHHHHHHHH
T ss_pred cCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC-chhhcCCCCchHHHHHHHHH
Confidence 378999999876443211 0000112456778888888876 555422 22334444555555555544
No 93
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.30 E-value=1.1e+02 Score=20.94 Aligned_cols=48 Identities=6% Similarity=0.131 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
.+.....++++++.|.+.|++.|.+|.... + ..++.-+.+.+.+++..
T Consensus 109 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~---~-~~~~~~~~~~~~l~~l~ 156 (305)
T 3obe_A 109 MPKFDEFWKKATDIHAELGVSCMVQPSLPR---I-ENEDDAKVVSEIFNRAG 156 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCCC---C-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeCCCCC---C-CCHHHHHHHHHHHHHHH
Confidence 356677899999999999999999974322 1 23344455555555544
No 94
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=34.17 E-value=1.1e+02 Score=20.61 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
+...+.++++++.|.+.|.+.|.++.... ..+.+.++.-+.+.+.+++..
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~-~~~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGYDV-YYQEANNETRRRFRDGLKESV 153 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCSC-SSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCC-CcCcCHHHHHHHHHHHHHHHH
Confidence 44556788999999999999999872211 123344555555666665544
No 95
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=34.09 E-value=98 Score=20.21 Aligned_cols=51 Identities=14% Similarity=0.048 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHh
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 81 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~ 81 (110)
.+.....++++++.|.+.|.+.|.+.. |....+++.++.-+.+.+.+++..
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~~~~~~~~~~~~~~~l~~l~ 130 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVMA-GVVPAGEDAERYRAVFIDNIRYAA 130 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCC-CBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECc-CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 456677889999999999999997732 222234566666666666666554
No 96
>2ig8_A Hypothetical protein PA3499; structural genomics, PSI-2, Pro structure initiative; 1.90A {Pseudomonas aeruginosa}
Probab=33.77 E-value=84 Score=19.36 Aligned_cols=25 Identities=4% Similarity=-0.000 Sum_probs=18.9
Q ss_pred CCEEEEEecChHHHHHHHHHHHHHh
Q 033840 84 FKEVHFILFTDDIYNVWLKKAKELL 108 (110)
Q Consensus 84 l~~I~~v~~~~~~~~~f~~~~~~~~ 108 (110)
+-++.+.+.+.+.+..+.+.+.++|
T Consensus 78 vvk~~vyl~d~~df~~~~~v~~~~f 102 (144)
T 2ig8_A 78 LYKLNVYVTRIADKDAIGRARQEFF 102 (144)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHHT
T ss_pred EEEEEEEECChHHHHHHHHHHHHHh
Confidence 3456666667777888888888888
No 97
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=33.77 E-value=1.3e+02 Score=21.54 Aligned_cols=70 Identities=3% Similarity=-0.144 Sum_probs=40.6
Q ss_pred CCceEEEecCCCCCCCCCcH----HHHH---HHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHH
Q 033840 11 PVSHVIHTVGPVFNFHCNPE----DILR---SAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEF 80 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~----~~L~---~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~ 80 (110)
+++.|||+++.......... +.+. ....++++.|.+.|.+.+.+-+=+......++.-+++.+.+.+...
T Consensus 112 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~~~~~p~~~Yg~sK~~~E~~~~~ 188 (399)
T 3nzo_A 112 QYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIMEMFLMR 188 (399)
T ss_dssp CCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCSCSSCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 57899999986533211111 1111 2245788889999988777644333333344555666666665443
No 98
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=33.58 E-value=1.2e+02 Score=21.07 Aligned_cols=57 Identities=18% Similarity=0.087 Sum_probs=35.5
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHH
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIA 73 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~ 73 (110)
.++.|||+++.....+....+.+. ..+++.++.+.+.+.+.+-+ +..-|.+..+.++
T Consensus 70 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~vi------v~SNPv~~~~~~~ 129 (303)
T 1o6z_A 70 GSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISL------TTSNPVDLLNRHL 129 (303)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEE------ECCSSHHHHHHHH
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE------EeCChHHHHHHHH
Confidence 489999999865443332222222 45677777788887776655 2346777665544
No 99
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=33.35 E-value=77 Score=21.64 Aligned_cols=44 Identities=16% Similarity=0.294 Sum_probs=24.9
Q ss_pred CCceEEEecCCCCCCCCCc-HHHH---HHHHHHHHHHHHhCC-CceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNP-EDIL---RSAYKNCLSVGKANN-IQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~-~~~L---~~~~~~~L~~a~~~~-~~sIa~ 54 (110)
.++.|||.++|.-....+. .+.+ -....++|+.|.+.+ .+.|-+
T Consensus 80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~ 128 (338)
T 2rh8_A 80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVIL 128 (338)
T ss_dssp TCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEE
Confidence 3789999998752111111 1112 234567888888875 776665
No 100
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=33.11 E-value=39 Score=22.99 Aligned_cols=44 Identities=16% Similarity=0.253 Sum_probs=27.3
Q ss_pred CCceEEEecCCCCCCC---CCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFH---CNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~---~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++..... .+..+.+ .....+.++.|.+.+.+.+.+
T Consensus 55 ~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 104 (321)
T 1e6u_A 55 RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 104 (321)
T ss_dssp CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 5799999998753100 0111112 244568888898888876655
No 101
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=32.55 E-value=1e+02 Score=19.97 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=25.2
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++. .+....+++++.+.+.|...|-+
T Consensus 88 ~~D~vv~~a~~~---------~~~~~~~~~~~~~~~~~~~~iV~ 122 (236)
T 3qvo_A 88 GQDIVYANLTGE---------DLDIQANSVIAAMKACDVKRLIF 122 (236)
T ss_dssp TCSEEEEECCST---------THHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCC---------chhHHHHHHHHHHHHcCCCEEEE
Confidence 368999998763 12234668888888888877765
No 102
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=31.91 E-value=73 Score=22.89 Aligned_cols=53 Identities=8% Similarity=0.081 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHHHHHHHhCCCceEE--e-cccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 29 PEDILRSAYKNCLSVGKANNIQYIA--F-PAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 29 ~~~~L~~~~~~~L~~a~~~~~~sIa--~-P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
.++.++...+..++.+.+.|+.-+= + |-..++ .|++.++..+.+++.++++.+
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~-~gl~~~~~v~~v~~~~~~a~~ 130 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTS-RGVALETCVNGVANALATSEE 130 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHT-TTCCHHHHHHHHHHHHTTHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhcc-CCCCHHHHHHHHHHHHHHHhh
Confidence 4678999999999999999987663 2 555554 679999999999999988765
No 103
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=31.70 E-value=1.2e+02 Score=23.29 Aligned_cols=34 Identities=15% Similarity=0.410 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChH
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPD 67 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~ 67 (110)
..+.++ .+.++.|.++|.+-|.||=+. ..|||++
T Consensus 23 ~N~~~i-~~~i~~Aa~~GAdLvvfPEL~--ltGY~~~ 56 (565)
T 4f4h_A 23 GNVAKI-VAAAQAAHDAGAHFLIAPELA--LSGYPPE 56 (565)
T ss_dssp HHHHHH-HHHHHHHHHTTCSEEECCTTT--TTCSCCG
T ss_pred HHHHHH-HHHHHHHHHCCCcEEECCCCc--ccCCChH
Confidence 344443 445777889999999999986 3466653
No 104
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=31.62 E-value=1.1e+02 Score=21.02 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=24.2
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQ 50 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~ 50 (110)
+++.|||++++.........+.+. ....+.++.|.+.|.+
T Consensus 115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r 157 (357)
T 2x6t_A 115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP 157 (357)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 589999999875432112222222 3456778888777773
No 105
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=31.62 E-value=36 Score=19.94 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=24.7
Q ss_pred ceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 033840 13 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 49 (110)
Q Consensus 13 k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~ 49 (110)
+|+|-+.+|.+.. .++.|.+++..+.....++|-
T Consensus 53 ~Y~i~~~~~D~k~---ge~~L~~ai~~i~~~i~~~gG 86 (93)
T 2qn6_B 53 RYRVDVVGTNPKE---ASEALNQIISNLIKIGKEENV 86 (93)
T ss_dssp EEEEEEEESCHHH---HHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEEecCHHH---HHHHHHHHHHHHHHHHHHhCC
Confidence 5777777776542 467888888888888877763
No 106
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=31.15 E-value=1.4e+02 Score=21.81 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCceEEe-cccc-------cCCCccChHHHHHHHHHHHHHHhc
Q 033840 37 YKNCLSVGKANNIQYIAF-PAIS-------CGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 37 ~~~~L~~a~~~~~~sIa~-P~i~-------tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
+.+.++.+.+.|+++|.+ |.+. .|...+.++-..+.+++.+++...
T Consensus 71 l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~p 124 (342)
T 1h7n_A 71 LKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFP 124 (342)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCC
Confidence 344456677899999988 5433 377788999999999999988654
No 107
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.57 E-value=1.1e+02 Score=20.63 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=26.2
Q ss_pred CCceEEEecCCCCCCCCCcHHHH---HHHHHHHHHHHHh-CCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDIL---RSAYKNCLSVGKA-NNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L---~~~~~~~L~~a~~-~~~~sIa~ 54 (110)
+++.|||++++..... +..+.+ -....+.++.|.+ .+.+.+.+
T Consensus 83 ~~d~vih~A~~~~~~~-~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~ 129 (342)
T 1y1p_A 83 GAAGVAHIASVVSFSN-KYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129 (342)
T ss_dssp TCSEEEECCCCCSCCS-CHHHHHHHHHHHHHHHHHHHHTCTTCCEEEE
T ss_pred CCCEEEEeCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 5799999998754321 222222 2345677887774 56666665
No 108
>3i3f_A Hypothetical protein; structural genomics, niaid, decode, infectious seattle structural genomics center for infectious disease, unknown function; 1.35A {Giardia lamblia}
Probab=29.83 E-value=1e+02 Score=18.99 Aligned_cols=25 Identities=12% Similarity=0.064 Sum_probs=17.3
Q ss_pred CCEEEEEecChH---HHHHHHHHHHHHh
Q 033840 84 FKEVHFILFTDD---IYNVWLKKAKELL 108 (110)
Q Consensus 84 l~~I~~v~~~~~---~~~~f~~~~~~~~ 108 (110)
+-++.+.+.+.+ .+..+.+.+.++|
T Consensus 82 Vvk~~vyl~d~~~~~df~~~n~v~~~~f 109 (141)
T 3i3f_A 82 IVSLNIFLSTSLSDSEEARFNELYREVF 109 (141)
T ss_dssp EEEEEEEEETTCCHHHHHHHHHHHHHHS
T ss_pred EEEEEEEEcCCccccCHHHHHHHHHHHh
Confidence 334455555555 7888888888888
No 109
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=29.12 E-value=66 Score=22.00 Aligned_cols=44 Identities=7% Similarity=0.049 Sum_probs=27.2
Q ss_pred CCceEEEecCCCCCCC--CCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFH--CNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~--~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++..... .+..+.+ .....+.++.|.+.+.+.+.+
T Consensus 76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~ 124 (337)
T 1r6d_A 76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVH 124 (337)
T ss_dssp TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4789999998753110 0111122 245668888888888876665
No 110
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=29.00 E-value=1.3e+02 Score=20.17 Aligned_cols=44 Identities=20% Similarity=0.150 Sum_probs=26.8
Q ss_pred CCceEEEecCCCCCCCC--CcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHC--NPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||.+++...... ...+.+ -....++++.|.+.|.+.+-+
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~ 111 (313)
T 3ehe_A 63 GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVF 111 (313)
T ss_dssp TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 47899999986432211 112222 234557788888888877666
No 111
>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A*
Probab=28.11 E-value=63 Score=25.27 Aligned_cols=49 Identities=14% Similarity=0.111 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccC---CCccChHHHHHHHHHHHH
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCG---VSQYPPDEAATIAISTVK 78 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG---~~g~p~~~~a~~~~~~i~ 78 (110)
.+.+..+..+.-+.+.+..+..+.|+..|.+ ..+++||-..|.++|-..
T Consensus 377 ~~~I~~a~~~~~~~~~~~~~~~~~f~~yGK~~iK~~k~SPDafvQmAlQLA~ 428 (612)
T 1xl7_A 377 LNDVSQAKAQHLKAASDLQIAASTFTSFGKKLTKEEALHPDTFIQLALQLAY 428 (612)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEC-----------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcceeEEEecCCCHHHHHhCCCCccHHHHHHHHHHH
Confidence 3566666667777778899999999999988 478999999999999764
No 112
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.02 E-value=71 Score=21.23 Aligned_cols=36 Identities=11% Similarity=0.169 Sum_probs=22.9
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHh--CCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA--NNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~--~~~~sIa~ 54 (110)
.++.|||++++.... . . ..++.++.+.+ .+.+.+-+
T Consensus 63 ~~d~vi~~a~~~~~~--~--~----~~~~l~~a~~~~~~~~~~~v~ 100 (286)
T 3ius_A 63 GVTHLLISTAPDSGG--D--P----VLAALGDQIAARAAQFRWVGY 100 (286)
T ss_dssp TCCEEEECCCCBTTB--C--H----HHHHHHHHHHHTGGGCSEEEE
T ss_pred CCCEEEECCCccccc--c--H----HHHHHHHHHHhhcCCceEEEE
Confidence 489999999886432 1 1 23456666666 56676665
No 113
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=27.77 E-value=1.3e+02 Score=19.74 Aligned_cols=38 Identities=16% Similarity=0.294 Sum_probs=22.9
Q ss_pred CCceEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
.++.|||++++.+.. . ....+++++.|.+.|.+.+-+.
T Consensus 65 ~~d~vi~~a~~~~~~------~-~~~~~~l~~a~~~~~~~~~v~~ 102 (286)
T 2zcu_A 65 GVEKLLLISSSEVGQ------R-APQHRNVINAAKAAGVKFIAYT 102 (286)
T ss_dssp TCSEEEECC---------------CHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEeCCCCchH------H-HHHHHHHHHHHHHcCCCEEEEE
Confidence 378999999875321 1 2345777888888888777663
No 114
>3kwr_A Putative RNA-binding protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative, PS binding protein; HET: GOL; 1.45A {Lactobacillus plantarum}
Probab=27.58 E-value=74 Score=18.70 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=29.6
Q ss_pred CCceEEeccc-ccCCCccChHHHHHHHHHHHHHHhc
Q 033840 48 NIQYIAFPAI-SCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 48 ~~~sIa~P~i-~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
+.=.+.||-+ |+-..|=..+++.+-+-+++..++.
T Consensus 20 ~gy~v~fPDlPGc~T~GdT~eEAl~nA~EAL~~~Le 55 (97)
T 3kwr_A 20 TYWDVRFPDVPAAQTFGASVQVAADNAANALAIALF 55 (97)
T ss_dssp SSEEEECTTCGGGCEEESSHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCCcEEecCCHHHHHHHHHHHHHHHHH
Confidence 4456889999 7888999999999999999988875
No 115
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=27.51 E-value=44 Score=18.74 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=17.6
Q ss_pred EecCCCCCCCCCcHHHHHHHHH-----HHHHHHHhCCCce
Q 033840 17 HTVGPVFNFHCNPEDILRSAYK-----NCLSVGKANNIQY 51 (110)
Q Consensus 17 H~v~P~~~~~~~~~~~L~~~~~-----~~L~~a~~~~~~s 51 (110)
|.+||...+.. ++.+.+-.+ .+|..|.+.|+++
T Consensus 1 ~~~g~qls~~~--ee~I~~fL~~~Gp~~AL~IAK~LGlkt 38 (72)
T 3eyi_A 1 HMASPQFSQQR--EEDIYRFLKDNGPQRALVIAQALGMRT 38 (72)
T ss_dssp ---CCCCSSHH--HHHHHHHHHHHCSEEHHHHHHHTTCCS
T ss_pred CCcchhhhhhh--HHHHHHHHHHcCCchHHHHHHHhCcch
Confidence 67888775421 223333333 5788888888775
No 116
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=26.81 E-value=1.5e+02 Score=20.04 Aligned_cols=61 Identities=10% Similarity=0.022 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFT 93 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~~l~~I~~v~~~ 93 (110)
+.-.+.++++++.|.+.|.+.|.+.+ |.. .+-+.++.-+.+.+.+++..+.-..|++++.+
T Consensus 90 ~~~~~~~~~~i~~A~~lGa~~vv~h~-g~~-~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn 150 (303)
T 3aal_A 90 SLGVDFLRAEIERTEAIGAKQLVLHP-GAH-VGAGVEAGLRQIIRGLNEVLTREQNVQIALET 150 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECC-EEC-TTSCHHHHHHHHHHHHHHHCCSSCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECC-CcC-CCCCHHHHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 44566778899999999999997722 111 12366777777778887765422445665544
No 117
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=26.06 E-value=1.5e+02 Score=19.66 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=27.7
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~~~sIa~P 55 (110)
.++.|||.+|...... -.+.+. ....+.++.|.+.+...|-+-
T Consensus 64 ~~D~vi~~Ag~~~~~~--~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~ 109 (267)
T 3rft_A 64 GCDGIVHLGGISVEKP--FEQILQGNIIGLYNLYEAARAHGQPRIVFA 109 (267)
T ss_dssp TCSEEEECCSCCSCCC--HHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECCCCcCcCC--HHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4689999999854332 112222 344577888888888777763
No 118
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=25.35 E-value=63 Score=25.32 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccC---CCccChHHHHHHHHHHHH
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCG---VSQYPPDEAATIAISTVK 78 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG---~~g~p~~~~a~~~~~~i~ 78 (110)
.+.++.+..+.-+.+.+..+..+.|+..|.+ ..+++||-..|.++|-..
T Consensus 369 ~~~I~~a~~~~~~~~~~~~~~~~~f~~yGK~~iK~~k~SPDafiQmAlQLAy 420 (616)
T 1nm8_A 369 KSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAY 420 (616)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEECSCSSHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcceeEEEecCCCHHHHHhCCCChhHHHHHHHHHHH
Confidence 3566666677777788899999999999988 478999999999999764
No 119
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=25.23 E-value=39 Score=23.36 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=27.6
Q ss_pred CCceEEEecCCCCCCCC--CcHHH---HHHHHHHHHHHHHhCCCceEEec
Q 033840 11 PVSHVIHTVGPVFNFHC--NPEDI---LRSAYKNCLSVGKANNIQYIAFP 55 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~~~~---L~~~~~~~L~~a~~~~~~sIa~P 55 (110)
.++.|||++++...... +.... =.....+.++.|.+.+.+.+.+.
T Consensus 100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~ 149 (351)
T 3ruf_A 100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYA 149 (351)
T ss_dssp TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 57999999986421110 11111 12345678888999998777663
No 120
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=24.67 E-value=64 Score=22.65 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=26.9
Q ss_pred CceEEEecCCCCCCCC--CcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 12 VSHVIHTVGPVFNFHC--NPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 12 ~k~IiH~v~P~~~~~~--~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
++.|||++++...... ...+.+ .....+.++.|.+.+.+.|.+
T Consensus 94 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~ 141 (397)
T 1gy8_A 94 IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIF 141 (397)
T ss_dssp CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEE
Confidence 8999999987532100 111122 234567888888888877766
No 121
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=24.60 E-value=1.7e+02 Score=19.97 Aligned_cols=56 Identities=9% Similarity=0.188 Sum_probs=39.0
Q ss_pred HHHHHHHhC-CCceEEecccccCC-----------CccChHHHHHHHHHHHHHHhc-CCCEEEEEecCh
Q 033840 39 NCLSVGKAN-NIQYIAFPAISCGV-----------SQYPPDEAATIAISTVKEFAN-DFKEVHFILFTD 94 (110)
Q Consensus 39 ~~L~~a~~~-~~~sIa~P~i~tG~-----------~g~p~~~~a~~~~~~i~~~~~-~l~~I~~v~~~~ 94 (110)
.+.+.+.+. +...+.+|.+.-|. ..++.+.....+.+.+++..+ .++++.||.-..
T Consensus 53 ~~a~~l~~~~~~~~lv~P~i~yG~~s~~h~~fPGTisl~~~tl~~~l~di~~sl~~~G~rrlvivNgHG 121 (254)
T 3lub_A 53 EAAELALSRSGVRCMVMPPVPFGAHNPGQRELPFCIHTRYATQQAILEDIVSSLHVQGFRKLLILSGHG 121 (254)
T ss_dssp HHHHHHHHHHCCCEEECCCBCCBCCCTTTTTSTTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCT
T ss_pred HHHHhhhhhcCCCEEEeCCccccCCCccccCcCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 333333333 78899999998776 336778887777777777665 699998886543
No 122
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=24.50 E-value=44 Score=22.53 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=27.2
Q ss_pred CCceEEEecCCCCCCC-CCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFH-CNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~-~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++..... .+..+.+ .....+.++.|.+.|.+.+.+
T Consensus 68 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 115 (312)
T 2yy7_A 68 KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFW 115 (312)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEEC
T ss_pred CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 6899999998742110 0111112 234568888888888877665
No 123
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=23.89 E-value=1.3e+02 Score=22.15 Aligned_cols=44 Identities=7% Similarity=0.107 Sum_probs=29.0
Q ss_pred CCceEEEecCCCCCCCCC-cHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~-~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||+++........ ..+.=.....+.++.|.+.+.+.+.+
T Consensus 167 ~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~ 211 (478)
T 4dqv_A 167 TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTY 211 (478)
T ss_dssp HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 368999999875443222 22333446778889998888866555
No 124
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=23.48 E-value=72 Score=21.54 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=26.7
Q ss_pred CCceEEEecCCCCCCC-CCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFH-CNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~-~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++..... ......+ -....+.++.|.+.+.+.+-+
T Consensus 62 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 109 (317)
T 3ajr_A 62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVI 109 (317)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEE
Confidence 6899999998642110 0111111 234567888888888877665
No 125
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=23.28 E-value=1.7e+02 Score=21.48 Aligned_cols=43 Identities=9% Similarity=0.162 Sum_probs=23.9
Q ss_pred CCceEEEecCCCCCC-CC-CcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNF-HC-NPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~-~~-~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++.-.. .. ...+.=-...+++++.|.+ +.+.+.+
T Consensus 231 ~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~ 275 (508)
T 4f6l_B 231 NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIY 275 (508)
T ss_dssp CCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEE
T ss_pred CCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEE
Confidence 589999999875221 11 2223334456788888877 4444443
No 126
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=23.16 E-value=1.7e+02 Score=20.36 Aligned_cols=40 Identities=5% Similarity=-0.074 Sum_probs=24.4
Q ss_pred CCceEEEecCCCCCCCCCcHHHHH---HHHHHHHHHHHhCC-Cc
Q 033840 11 PVSHVIHTVGPVFNFHCNPEDILR---SAYKNCLSVGKANN-IQ 50 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~~L~---~~~~~~L~~a~~~~-~~ 50 (110)
.++.|||++|..-..+....+.++ ..+++.++.+.+.+ .+
T Consensus 80 ~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~ 123 (327)
T 1y7t_A 80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKD 123 (327)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 589999999865332222233333 34567777777765 44
No 127
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=23.16 E-value=1.7e+02 Score=19.98 Aligned_cols=44 Identities=14% Similarity=0.091 Sum_probs=26.6
Q ss_pred CCceEEEecCCCCCCCCCcHH--HHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~~~~~--~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++.........+ .=-....++++.|.+.+.+.|.+
T Consensus 88 ~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~ 133 (330)
T 2pzm_A 88 KPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLN 133 (330)
T ss_dssp CCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 579999999875432111111 11234567788888888766665
No 128
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.93 E-value=73 Score=22.02 Aligned_cols=44 Identities=16% Similarity=0.156 Sum_probs=26.7
Q ss_pred CCceEEEecCCCCCCC--CCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFH--CNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~--~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++..... .+..+.+ -....+.++.|.+.+.+.+.+
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 150 (352)
T 1sb8_A 102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY 150 (352)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4789999998742110 0111122 234567888888888877665
No 129
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=22.62 E-value=1.8e+02 Score=19.61 Aligned_cols=44 Identities=9% Similarity=0.005 Sum_probs=23.3
Q ss_pred CCceEEEecCCCCC--CCC-CcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFN--FHC-NPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~--~~~-~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++.-. ... ...+.=.....+.++.|.+.|.+.+.+
T Consensus 77 ~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 123 (342)
T 2x4g_A 77 GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILY 123 (342)
T ss_dssp TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEE
T ss_pred CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 47999999986421 111 111222345678888888888766655
No 130
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=22.35 E-value=67 Score=25.31 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccC---CCccChHHHHHHHHHHHH
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCG---VSQYPPDEAATIAISTVK 78 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG---~~g~p~~~~a~~~~~~i~ 78 (110)
.+.|..+..+.-+.+.+..+..+.|+..|.+ ..+++||-..|.++|-..
T Consensus 383 ~~~I~~a~~~~~~~~~~~~~~~~~f~~yGK~~iK~~k~SPDafvQmAlQLAy 434 (639)
T 1t1u_A 383 QGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAY 434 (639)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEECSCCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcceeEEEecCCCHHHHHhCCCCchHHHHHHHHHHH
Confidence 3567777777777788899999999999987 579999999999999764
No 131
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=22.34 E-value=60 Score=14.18 Aligned_cols=12 Identities=33% Similarity=0.551 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHh
Q 033840 97 YNVWLKKAKELL 108 (110)
Q Consensus 97 ~~~f~~~~~~~~ 108 (110)
+..|++.++++|
T Consensus 3 fkrfrkkfkklf 14 (27)
T 2ket_A 3 FKRFRKKFKKLF 14 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 345666666665
No 132
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=22.26 E-value=68 Score=21.80 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=27.1
Q ss_pred CCceEEEecCCCCCCCC--CcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHC--NPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++...... +..+.+ -....+.++.|.+.+.+.+-+
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 115 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIF 115 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEE
Confidence 57899999987532100 111122 234567888888888877665
No 133
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=21.98 E-value=67 Score=21.75 Aligned_cols=28 Identities=4% Similarity=0.004 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeccc
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAI 57 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i 57 (110)
.+....+++.+.+.|.+.|++.|.++.-
T Consensus 33 ~eNT~~tl~la~era~e~~Ik~iVVASs 60 (206)
T 1t57_A 33 KENTERVLELVGERADQLGIRNFVVASV 60 (206)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred cccHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3577889999999999999999999664
No 134
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=21.82 E-value=1.8e+02 Score=19.17 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFT 93 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~~l~~I~~v~~~ 93 (110)
+...+.++++++.|.+.|.+.|.+.. |.. .+.+.++.-+.+.+.+++..+.-..|++++.+
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~~-g~~-~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn 145 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIHP-GSH-LGTGEEEGIDRIVRGLNEVLNNTEGVVILLEN 145 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECC-EEC-TTSCHHHHHHHHHHHHHHHHTTCCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEec-CCC-CCCCHHHHHHHHHHHHHHHHcccCCCEEEEeC
Confidence 44556788999999999999998732 111 23366777777777777766432345555443
No 135
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=21.68 E-value=69 Score=21.62 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeccc
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAI 57 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i 57 (110)
.+....+++.+.+.|.+.|++.|.++.-
T Consensus 25 ~eNT~~tl~la~era~e~~Ik~iVVAS~ 52 (201)
T 1vp8_A 25 RENTEETLRLAVERAKELGIKHLVVASS 52 (201)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred cccHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3578889999999999999999999764
No 136
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=21.07 E-value=2.3e+02 Score=20.15 Aligned_cols=43 Identities=9% Similarity=0.148 Sum_probs=24.8
Q ss_pred CCceEEEecCCCCCCCC--CcHHHHHHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~~~~L~~~~~~~L~~a~~~~~~sIa~ 54 (110)
.++.|||++++...... ...+.=-....++++.|.+ +.+.+.+
T Consensus 150 ~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~ 194 (427)
T 4f6c_A 150 NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIY 194 (427)
T ss_dssp CCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEE
T ss_pred CCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 58999999987632211 1122223356778888877 5555554
No 137
>1rp3_B Anti sigma factor FLGM; transcription; 2.30A {Aquifex aeolicus} SCOP: a.137.11.1 PDB: 1sc5_B
Probab=20.91 E-value=51 Score=18.91 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=17.3
Q ss_pred cccCCCccChHHHHHHHHHHH
Q 033840 57 ISCGVSQYPPDEAATIAISTV 77 (110)
Q Consensus 57 i~tG~~g~p~~~~a~~~~~~i 77 (110)
|..|.|..+.+..|+-|++..
T Consensus 67 I~~GtY~vd~~~iA~kml~~~ 87 (88)
T 1rp3_B 67 IEKGEYEVSDEKVVKGLIEFF 87 (88)
T ss_dssp HHTTCCCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCHHHHHHHHHHHh
Confidence 456899999999999998753
No 138
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=20.84 E-value=64 Score=22.15 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=26.8
Q ss_pred CCceEEEecCCCCCCCC--CcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 11 PVSHVIHTVGPVFNFHC--NPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 11 ~~k~IiH~v~P~~~~~~--~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+++.|||++++...... ...+.+ -....++++.|.+.+.+.+.+
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 129 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVF 129 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 57899999987521100 111122 234567788888888877666
No 139
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=20.63 E-value=2e+02 Score=19.66 Aligned_cols=51 Identities=29% Similarity=0.296 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEecccccCCCccChHHHHHHHHHHHHHHhc
Q 033840 30 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 82 (110)
Q Consensus 30 ~~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG~~g~p~~~~a~~~~~~i~~~~~ 82 (110)
.+.+++-...+-..|.-+|+.+|||...+- -....+.+++.+.+.++..++
T Consensus 101 ~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~--~~~~~~~a~~~~~~ii~~ll~ 151 (251)
T 2wqk_A 101 EDITYSGTVSGAMEGRILGIPSIAFSAFGR--ENIMFEEIAKVCVDIVKKVLN 151 (251)
T ss_dssp GGGGGCHHHHHHHHHHHTTCCEEEEEEECS--SSCCHHHHHHHHHHHHHHHHH
T ss_pred cceecchHHHHHHHHHhcCCCeEEEEcccC--CCcchHHHHHHHHHHHHHHHH
Confidence 346677777777778889999999986433 345567888888777777653
No 140
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=20.48 E-value=2e+02 Score=19.17 Aligned_cols=42 Identities=17% Similarity=0.102 Sum_probs=25.7
Q ss_pred ceEEEecCCCCCCCC--CcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 13 SHVIHTVGPVFNFHC--NPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 13 k~IiH~v~P~~~~~~--~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
+.|||++++...... .....+ -....+.++.|.+.+.+.+-+
T Consensus 64 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 110 (312)
T 3ko8_A 64 DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVF 110 (312)
T ss_dssp SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 899999985422211 112222 234567888888888877666
No 141
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=20.42 E-value=1.9e+02 Score=18.92 Aligned_cols=41 Identities=22% Similarity=0.155 Sum_probs=25.7
Q ss_pred CceEEEecCCCCCCCCCcHHHH---HHHHHHHHHHHHhCCCceEEe
Q 033840 12 VSHVIHTVGPVFNFHCNPEDIL---RSAYKNCLSVGKANNIQYIAF 54 (110)
Q Consensus 12 ~k~IiH~v~P~~~~~~~~~~~L---~~~~~~~L~~a~~~~~~sIa~ 54 (110)
++.|||++++.... ...+.+ -....+.++.|.+.+.+.|.+
T Consensus 64 ~d~vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 107 (267)
T 3ay3_A 64 CDGIIHLGGVSVER--PWNDILQANIIGAYNLYEAARNLGKPRIVF 107 (267)
T ss_dssp CSEEEECCSCCSCC--CHHHHHHHTHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcCCCCC--CHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 68999999875211 111111 234567788888888877665
No 142
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=20.32 E-value=45 Score=20.22 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=17.4
Q ss_pred HHHHHHHhcCCCEEEEEecChHHHHHHHHHHHH
Q 033840 74 ISTVKEFANDFKEVHFILFTDDIYNVWLKKAKE 106 (110)
Q Consensus 74 ~~~i~~~~~~l~~I~~v~~~~~~~~~f~~~~~~ 106 (110)
.++++++.+. ++-+++.+++..+...+.+++
T Consensus 34 ~~~~~~l~~~--digIIlIte~ia~~i~~~i~~ 64 (115)
T 3aon_B 34 RKTIDEMAKN--EYGVIYITEQCANLVPETIER 64 (115)
T ss_dssp HHHHHHHHHT--TEEEEEEEHHHHTTCHHHHHH
T ss_pred HHHHHHHHhc--CceEEEEeHHHHHHhHHHHHH
Confidence 3445555544 566666666665555555554
No 143
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=20.09 E-value=73 Score=25.19 Aligned_cols=48 Identities=21% Similarity=0.144 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEecccccC---CCccChHHHHHHHHHHHH
Q 033840 31 DILRSAYKNCLSVGKANNIQYIAFPAISCG---VSQYPPDEAATIAISTVK 78 (110)
Q Consensus 31 ~~L~~~~~~~L~~a~~~~~~sIa~P~i~tG---~~g~p~~~~a~~~~~~i~ 78 (110)
+.+..+..+.-+.+.+..+..+.|+..|.+ ..++++|-..|.++|-..
T Consensus 420 ~~I~~a~~~~~~~~~~~~~~~~~f~~~GK~~iK~~k~SPDafvQmAlQLA~ 470 (653)
T 2deb_A 420 AGITAAKEKFDTTVKTLSIDSIQFQRGGKEFLKKKQLSPDAVAQLAFQMAF 470 (653)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSCCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcceeEEEecCCCHHHHHhCCCCchHHHHHHHHHHH
Confidence 455666666666677888999999999877 478999999999999864
Done!