BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033853
MQEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNR
SAKIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLNCLSGKDGLNNLQN

High Scoring Gene Products

Symbol, full name Information P value
AT5G52545 protein from Arabidopsis thaliana 4.9e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033853
        (110 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955051 - symbol:AT5G52545 "AT5G52545" speci...   181  4.9e-14   1


>TAIR|locus:504955051 [details] [associations]
            symbol:AT5G52545 "AT5G52545" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 IPI:IPI00520016 RefSeq:NP_680425.4
            UniGene:At.27484 UniGene:At.45864 PRIDE:F4KG83
            EnsemblPlants:AT5G52545.1 GeneID:835331 KEGG:ath:AT5G52545
            PhylomeDB:F4KG83 Uniprot:F4KG83
        Length = 79

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 42/78 (53%), Positives = 51/78 (65%)

Query:    11 MHGRLACGRPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFVGGTS-GQMNRSXXXXXXX 68
             MHGRLACGRPLVVRLASEK+LED++ + SK ++ E N+T FV G+S GQM+R        
Sbjct:     1 MHGRLACGRPLVVRLASEKHLEDSSHDHSKRSLPEGNRTRFVNGSSSGQMSRDEKVTAIK 60

Query:    69 XXXXXXEE-ESSSAKKQK 85
                   EE E    KKQK
Sbjct:    61 NKLKALEEDEKRDPKKQK 78


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.303   0.120   0.312    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110        84   0.00091  102 3  10 23  0.40    30
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  528 (56 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.54u 0.09s 10.63t   Elapsed:  00:00:01
  Total cpu time:  10.54u 0.09s 10.63t   Elapsed:  00:00:01
  Start:  Fri May 10 06:11:48 2013   End:  Fri May 10 06:11:49 2013

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