Citrus Sinensis ID: 033859

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSAGGAEKKK
ccccccccccEEECccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccc
*****PNTGLFVGLNKGHVV*******************VHFVKNLIREVAGFAPYERRITELLKVGKD****KVAKRKLGTHKRA************************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTxxxxxxxxxxxxxxxxxxxxxGGAEKKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S ribosomal protein L36-3 confidentQ9LZ57
60S ribosomal protein L36 probableQ3T171
60S ribosomal protein L36-A probableQ92365

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A18, chain Q
Confidence level:very confident
Coverage over the Query: 7-102
View the alignment between query and template
View the model in PyMOL