BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033860
(110 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZOM|A Chain A, Crystal Structure Of Cuta1 From Oryza Sativa
pdb|2ZOM|B Chain B, Crystal Structure Of Cuta1 From Oryza Sativa
pdb|2ZOM|C Chain C, Crystal Structure Of Cuta1 From Oryza Sativa
Length = 113
Score = 175 bits (444), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 2/112 (1%)
Query: 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAE 58
ME S TVPSIVVYVTVPNKEAGK+LA SI+ KLAACVN VPGIESVY W+G +TDAE
Sbjct: 1 MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAE 60
Query: 59 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 110
ELLIIKTR+SLL+ LTEHVKANHEYDVPEVIALPI GG+ YLEWLK+STR+
Sbjct: 61 ELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 112
>pdb|2ZFH|A Chain A, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
pdb|2ZFH|B Chain B, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
pdb|2ZFH|C Chain C, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
pdb|2ZFH|D Chain D, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
pdb|2ZFH|E Chain E, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
pdb|2ZFH|F Chain F, Crystal Structure Of Putative Cuta1 From Homo Sapiens At
2.05a Resolution
Length = 179
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 14 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQSLLE 71
+VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG E D+E L++IKT+ SL+
Sbjct: 72 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVP 131
Query: 72 TLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 108
LT+ V++ H Y+V EVIALP+ G+ PYL+W++ T
Sbjct: 132 ALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVT 168
>pdb|1XK8|A Chain A, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
pdb|1XK8|B Chain B, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
pdb|1XK8|C Chain C, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
pdb|1XK8|D Chain D, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
pdb|1XK8|E Chain E, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
pdb|1XK8|F Chain F, Divalent Cation Tolerant Protein Cuta From Homo Sapiens
O60888
Length = 147
Score = 105 bits (263), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 14 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQSLLE 71
+VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG E D+E L++IKT+ SL+
Sbjct: 40 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVP 99
Query: 72 TLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 108
LT+ V++ H Y+V EVIALP+ G+ PYL+W++ T
Sbjct: 100 ALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVT 136
>pdb|1OSC|A Chain A, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
pdb|1OSC|B Chain B, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
pdb|1OSC|C Chain C, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
pdb|1OSC|D Chain D, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
pdb|1OSC|E Chain E, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
pdb|1OSC|F Chain F, Crystal Structure Of Rat Cuta1 At 2.15 A Resolution
Length = 126
Score = 105 bits (262), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 14 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQSLLE 71
+VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG E D+E L++IKT+ SL+
Sbjct: 27 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVP 86
Query: 72 TLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 110
LTE V++ H Y+V EVIALP+ G+ PYL W+ T
Sbjct: 87 ALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVTES 125
>pdb|1NZA|A Chain A, Divalent Cation Tolerance Protein (Cut A1) From Thermus
Thermophilus Hb8
pdb|1V6H|A Chain A, The Trimeric Structure Of Divalent Cation Tolerance
Protein Cuta1 From Thermus Thermophilus Hb8
pdb|1V6H|B Chain B, The Trimeric Structure Of Divalent Cation Tolerance
Protein Cuta1 From Thermus Thermophilus Hb8
pdb|1V6H|C Chain C, The Trimeric Structure Of Divalent Cation Tolerance
Protein Cuta1 From Thermus Thermophilus Hb8
Length = 103
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 12 VVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGET--DAEELLIIKTRQSL 69
VV +TVP++E + +A+++V+ +LAACVN VPG+ S+Y W+GE D E LL++KT
Sbjct: 4 VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHA 63
Query: 70 LETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 108
L E VKA H Y VPE++ALPI G++ YL+WL+ +T
Sbjct: 64 FPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102
>pdb|3AA9|A Chain A, Crystal Structure Analysis Of The Mutant Cuta1 (E61v) From
E. Coli
pdb|3AA9|B Chain B, Crystal Structure Analysis Of The Mutant Cuta1 (E61v) From
E. Coli
pdb|3AA9|C Chain C, Crystal Structure Analysis Of The Mutant Cuta1 (E61v) From
E. Coli
Length = 112
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEEL 60
++ S S+VV T P++ + LA ++ KLAAC +PG S+Y W+G+ + E +
Sbjct: 2 LDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYV 61
Query: 61 --LIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
+I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R
Sbjct: 62 VQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
>pdb|1NAQ|A Chain A, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
pdb|1NAQ|B Chain B, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
pdb|1NAQ|C Chain C, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
pdb|1NAQ|D Chain D, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
pdb|1NAQ|E Chain E, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
pdb|1NAQ|F Chain F, Crystal Structure Of Cuta1 From E.Coli At 1.7 A Resolution
Length = 112
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAE 58
++ S S+VV T P++ + LA ++ KLAAC +PG S+Y W+G E + E
Sbjct: 2 LDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYE 61
Query: 59 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
+I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R
Sbjct: 62 VQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
>pdb|3AA8|A Chain A, Crystal Structure Analysis Of The Mutant Cuta1 (S11vE61V)
FROM E. Coli
pdb|3AA8|B Chain B, Crystal Structure Analysis Of The Mutant Cuta1 (S11vE61V)
FROM E. Coli
pdb|3AA8|C Chain C, Crystal Structure Analysis Of The Mutant Cuta1 (S11vE61V)
FROM E. Coli
Length = 112
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEEL 60
++ S +VV T P++ + LA ++ KLAAC +PG S+Y W+G+ + E +
Sbjct: 2 LDEKSSNTAVVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYV 61
Query: 61 --LIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
+I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R
Sbjct: 62 VQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
>pdb|3AH6|A Chain A, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
pdb|3AH6|B Chain B, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
pdb|3AH6|C Chain C, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
pdb|3AH6|D Chain D, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
pdb|3AH6|E Chain E, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
pdb|3AH6|F Chain F, Remarkable Improvement Of The Heat Stability Of Cuta1 From
E.Coli By Rational Protein Designing
Length = 112
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAE 58
++ S +VV T P++ + LA ++ KLAAC +PG S+Y W+G E + E
Sbjct: 2 LDEKSSNTAVVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYE 61
Query: 59 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
+I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R
Sbjct: 62 VQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
>pdb|4E98|A Chain A, Crystal Structure Of Possible Cuta1 Divalent Ion Tolerance
Protein From Cryptosporidium Parvum Iowa Ii
pdb|4E98|B Chain B, Crystal Structure Of Possible Cuta1 Divalent Ion Tolerance
Protein From Cryptosporidium Parvum Iowa Ii
pdb|4E98|C Chain C, Crystal Structure Of Possible Cuta1 Divalent Ion Tolerance
Protein From Cryptosporidium Parvum Iowa Ii
Length = 138
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEE--LLIIKTRQS 68
I++Y++ PN++ +A+++V +L ACV+ +P + S+Y++KG+ E +L++KT
Sbjct: 37 ILIYISAPNQDEATSIAKTLVDEELCACVSIIPSVRSIYKFKGQVHDENEVMLLVKTTSQ 96
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
L TL E V H Y++PE+IA + G++ Y+ W+ + R
Sbjct: 97 LFTTLKEKVTEIHSYELPEIIATKVVYGNENYINWVNQTVR 137
>pdb|3OPK|A Chain A, Crystal Structure Of Divalent-Cation Tolerance Protein
Cuta From Salmonella Enterica Subsp. Enterica Serovar
Typhimurium Str. Lt2
pdb|3OPK|B Chain B, Crystal Structure Of Divalent-Cation Tolerance Protein
Cuta From Salmonella Enterica Subsp. Enterica Serovar
Typhimurium Str. Lt2
pdb|3OPK|C Chain C, Crystal Structure Of Divalent-Cation Tolerance Protein
Cuta From Salmonella Enterica Subsp. Enterica Serovar
Typhimurium Str. Lt2
Length = 118
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQ 67
++VV T P++ + LA ++ KLAAC +PG S+Y W+G E + E +I+KT
Sbjct: 17 AVVVLCTAPDEATAQDLAAKVLAEKLAACATLLPGATSLYYWEGKLEQEYEVQMILKTTV 76
Query: 68 SLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
S + L + +K++H Y PE++ LP+T G YL WL +S R
Sbjct: 77 SHQQALIDCLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 118
>pdb|3GSD|A Chain A, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|B Chain B, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|C Chain C, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|D Chain D, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|E Chain E, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|F Chain F, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|G Chain G, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|H Chain H, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|I Chain I, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|J Chain J, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|K Chain K, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
pdb|3GSD|L Chain L, 2.05 Angstrom Structure Of A Divalent-cation Tolerance
Protein (cuta) From Yersinia Pestis
Length = 122
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQ 67
+IVV T P++ + + LA ++ KLAACV +PG S+Y W+G E + E L+ K+
Sbjct: 21 AIVVLCTAPDEASAQNLAAQVLGEKLAACVTLLPGATSLYYWEGKLEQEYEVQLLFKSNT 80
Query: 68 SLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSS 107
+ L ++K +H Y PE++ LP+ G + YL WL +S
Sbjct: 81 DHQQALLTYIKQHHPYQTPELLVLPVRDGDKDYLSWLNAS 120
>pdb|1P1L|A Chain A, Structure Of The Periplasmic Divalent Cation Tolerance
Protein Cuta From Archaeoglobus Fulgidus
Length = 102
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 12 VVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDA--EELLIIKTRQSL 69
+Y+T P+ E +++A+ +++ KLAACVN P I+S + W+G+ +A E +I+KTR
Sbjct: 4 FIYITAPSLEEAERIAKRLLEKKLAACVNIFP-IKSFFWWEGKIEAATEFAMIVKTRSEK 62
Query: 70 LETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSS 107
+ + VKA H Y P + A+PI G + +L+W+ +
Sbjct: 63 FAEVRDEVKAMHSYTTPCICAIPIERGLKEFLDWIDET 100
>pdb|3AHP|A Chain A, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
pdb|3AHP|B Chain B, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
pdb|3AHP|C Chain C, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
pdb|3AHP|D Chain D, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
pdb|3AHP|E Chain E, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
pdb|3AHP|F Chain F, Crystal Structure Of Stable Protein, Cuta1, From A
Psychrotrophic Bacterium Shewanella Sp. Sib1
Length = 108
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGET--DAEELLIIKTRQS 68
++++ T P+ + ++A ++V+AKLAACV +ES+Y+W E + IK +
Sbjct: 7 LLIFTTCPDADIACRIATALVEAKLAACVQIGQAVESIYQWDNNICQSHEVPMQIKCMTT 66
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 108
+ + V H Y+VPE IA PI GG PYL+W+K ++
Sbjct: 67 DYPAIEQLVITMHPYEVPEFIATPIIGGFGPYLQWIKDNS 106
>pdb|2E66|A Chain A, Crystal Structure Of Cuta1 From Pyrococcus Horikoshii Ot3,
Mutation D60a
pdb|2E66|B Chain B, Crystal Structure Of Cuta1 From Pyrococcus Horikoshii Ot3,
Mutation D60a
pdb|2E66|C Chain C, Crystal Structure Of Cuta1 From Pyrococcus Horikoshii Ot3,
Mutation D60a
Length = 102
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQS 68
I+VY T P+ E+ +K+ ++++K +L AC N + + Y W+G E D E I+KTR++
Sbjct: 2 IIVYTTFPDWESAEKVVKTLLKERLIACAN-LREHRAFYWWEGKIEEDKEVGAILKTREA 60
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
L E L E +K H YDVP +I + + ++ YL+WL T+
Sbjct: 61 LWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETK 101
>pdb|1UKU|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Cu2+
pdb|1UMJ|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Cuta In The
Presence Of 3m Guanidine Hydrochloride
pdb|1UMJ|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Cuta In The
Presence Of 3m Guanidine Hydrochloride
Length = 102
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQS 68
I+VY T P+ E+ +K+ ++++K +L AC N + + Y W+G E D E I+KTR+
Sbjct: 2 IIVYTTFPDWESAEKVVKTLLKERLIACAN-LREHRAFYWWEGKIEEDKEVGAILKTRED 60
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
L E L E +K H YDVP +I + + ++ YL+WL T+
Sbjct: 61 LWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETK 101
>pdb|1J2V|A Chain A, Crystal Structure Of Cuta1 From Pyrococcus Horikoshii
Length = 102
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQS 68
I+VY T P+ E+ +K+ ++++K + AC N + + Y W+G E D E I+KTR+
Sbjct: 2 IIVYTTFPDWESAEKVVKTLLKERXIACAN-LREHRAFYWWEGKIEEDKEVGAILKTRED 60
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
L E L E +K H YDVP +I + + ++ YL+WL T+
Sbjct: 61 LWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETK 101
>pdb|1V99|A Chain A, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V99|B Chain B, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V99|C Chain C, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V99|D Chain D, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V99|E Chain E, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V99|F Chain F, Crystal Structure Of The Periplasmic Divalent Cation
Tolerance Protein Cuta From Pyrococcus Horikoshii Ot3 In
The Presence Of Cucl2
pdb|1V9B|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
pdb|1V9B|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
pdb|1V9B|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
pdb|1V9B|D Chain D, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
pdb|1V9B|E Chain E, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
pdb|1V9B|F Chain F, Crystal Structure Of Pyrococcus Horikoshii Cuta1 Complexed
With Co2+
Length = 102
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQS 68
I+VY T P+ E+ +K+ ++++K +L A N + + Y W+G E D E I+KTR+
Sbjct: 2 IIVYTTFPDWESAEKVVKTLLKERLIAXAN-LREHRAFYWWEGKIEEDKEVGAILKTRED 60
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 109
L E L E +K H YDVP +I + + ++ YL+WL T+
Sbjct: 61 LWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETK 101
>pdb|4IYQ|A Chain A, Crystal Structure Of Divalent Ion Tolerance Protein Cuta1
From Ehrlichia Chaffeensis
pdb|4IYQ|B Chain B, Crystal Structure Of Divalent Ion Tolerance Protein Cuta1
From Ehrlichia Chaffeensis
pdb|4IYQ|C Chain C, Crystal Structure Of Divalent Ion Tolerance Protein Cuta1
From Ehrlichia Chaffeensis
Length = 127
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 12 VVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSL 69
++Y T P E +++ +++ KL AC N I SVY W+ E + E +I+KT L
Sbjct: 27 LLYTTTPTYEDAYRISNILLENKLIACANIFSNITSVYVWEDEIHNNTECAIILKTTNDL 86
Query: 70 LETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 108
++ T ++A H YD P +I + T + +++W+ T
Sbjct: 87 VQHATNKIQAIHPYDTPAIITIDPTNANDKFIQWVNDCT 125
>pdb|2NUH|A Chain A, Crystal Structure Of Cuta From The Phytopathgen Bacterium
Xylella Fastidiosa
Length = 118
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 12 VVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKG--ETDAEELLIIKTRQSL 69
+++ T P+ + + ++ +V+ +LAACV ++PG S Y W+G ET E L+IKT
Sbjct: 7 LIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAVSTYRWQGKIETTQEIQLLIKTNAVH 66
Query: 70 LETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKS 106
+ + A H Y +PE IA+ ++ G YL W+ +
Sbjct: 67 VNAAITRLCALHPYRLPEAIAVQVSVGLPEYLTWINT 103
>pdb|1VHF|A Chain A, Crystal Structure Of Periplasmic Divalent Cation Tolerance
Protein
Length = 113
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQS 68
I+VY T PN+E ++ +++ +L AC N I S Y WKGE D E I KT +
Sbjct: 4 ILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEE 62
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSS 107
+ L E ++ H Y+ P + L + Y WL+ S
Sbjct: 63 KEKELYEELRKLHPYETPAIFTLKVENVLTEYXNWLRES 101
>pdb|1O5J|A Chain A, Crystal Structure Of Periplasmic Divalent Cation Tolerance
Protein (Tm1056) From Thermotoga Maritima At 1.95 A
Resolution
Length = 113
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGET--DAEELLIIKTRQS 68
I+VY T PN+E ++ +++ +L AC N I S Y WKGE D E I KT +
Sbjct: 14 ILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEE 72
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSS 107
+ L E ++ H Y+ P + L + Y WL+ S
Sbjct: 73 KEKELYEELRKLHPYETPAIFTLKVENVLTEYXNWLRES 111
>pdb|1KR4|A Chain A, Structure Genomics, Protein Tm1056, Cuta
Length = 125
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQS 68
I+VY T PN+E ++ +++ +L AC N I S Y WKGE D E I KT +
Sbjct: 24 ILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEE 82
Query: 69 LLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSS 107
+ L E ++ H Y+ P + L + Y WL+ S
Sbjct: 83 KEKELYEELRKLHPYETPAIFTLKVENILTEYXNWLRES 121
>pdb|2YX7|A Chain A, Crystals Structure Of T132a Mutant Of St1022 From
Sulfolobus Tokodaii 7
pdb|2PMH|A Chain A, Crystal Structure Of Thr132ala Of St1022 From Sulfolobus
Tokodaii
Length = 150
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 21 EAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEELLIIKTRQSLLETLTEHVKAN 80
E G KLA+ +PG+ VY G+ D + KTR+ +E E V +
Sbjct: 80 ELGNKLAQ-------------IPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMS- 125
Query: 81 HEYDVPEV 88
+PEV
Sbjct: 126 ----IPEV 129
>pdb|2EFQ|A Chain A, Crystal Structure Of Thr134 To Ala Of St1022-Glutamine
Complex From Sulfolobus Tokodaii 7
pdb|2YX4|A Chain A, Crystal Structure Of T134a Of St1022 From Sulfolobus
Tokodaii
Length = 150
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 21 EAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEELLIIKTRQSLLETLTEHVKAN 80
E G KLA+ +PG+ VY G+ D + KTR+ +E E V +
Sbjct: 80 ELGNKLAQ-------------IPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMS- 125
Query: 81 HEYDVPEV 88
+PEV
Sbjct: 126 ----IPEV 129
>pdb|2E7W|A Chain A, Crystal Structure Of The LrpASNC LIKE TRANSCRIPTIONAL
REGULATORS FROM Sulfolobus Tokodaii 7
pdb|2E7X|A Chain A, Structure Of The LrpASNC LIKE TRANSCRIPTIONAL REGULATOR
FROM Sulfolobus Tokodaii 7 Complexed With Its Cognate
Ligand
Length = 150
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 21 EAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEELLIIKTRQSLLETLTEHVKAN 80
E G KLA+ +PG+ VY G+ D + KTR+ +E E V +
Sbjct: 80 ELGNKLAQ-------------IPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMS- 125
Query: 81 HEYDVPEV 88
+PEV
Sbjct: 126 ----IPEV 129
>pdb|2EFN|A Chain A, Crystal Structure Of Ser 32 To Ala Of St1022 From
Sulfolobus Tokodaii 7
pdb|2PN6|A Chain A, Crystal Structure Of S32a Of St1022-Gln Complex From
Sulfolobus Tokodaii
Length = 150
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 21 EAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEELLIIKTRQSLLETLTEHVKAN 80
E G KLA+ +PG+ VY G+ D + KTR+ +E E V +
Sbjct: 80 ELGNKLAQ-------------IPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMS- 125
Query: 81 HEYDVPEV 88
+PEV
Sbjct: 126 ----IPEV 129
>pdb|2EFO|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022 From
Sulfolobus Tokodaii 7
pdb|2EFP|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022-Glutamine
Complex From Sulolobus Tokodaii 7
Length = 150
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 21 EAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETDAEELLIIKTRQSLLETLTEHVKAN 80
E G KLA+ +PG+ VY G+ D + KTR+ +E E V +
Sbjct: 80 ELGNKLAQ-------------IPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMS- 125
Query: 81 HEYDVPEV 88
+PEV
Sbjct: 126 ----IPEV 129
>pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|B Chain B, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|C Chain C, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
pdb|3NJ4|D Chain D, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine
Hydrolase
Length = 435
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 48 VYEWKGETDAEELLIIK 64
VY WKGETD E L I+
Sbjct: 102 VYAWKGETDEEYLWCIE 118
>pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With
Neplanocin
Length = 432
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 48 VYEWKGETDAEELLIIK 64
VY WKGETD E L I+
Sbjct: 99 VYAWKGETDEEYLWCIE 115
>pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
pdb|1A7A|B Chain B, Structure Of Human Placental S-adenosylhomocysteine
Hydrolase: Determination Of A 30 Selenium Atom
Substructure From Data At A Single Wavelength
Length = 432
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 48 VYEWKGETDAEELLIIK 64
VY WKGETD E L I+
Sbjct: 99 VYAWKGETDEEYLWCIE 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.310 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,190,974
Number of Sequences: 62578
Number of extensions: 104357
Number of successful extensions: 227
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 37
length of query: 110
length of database: 14,973,337
effective HSP length: 74
effective length of query: 36
effective length of database: 10,342,565
effective search space: 372332340
effective search space used: 372332340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 45 (21.9 bits)