Query 033860
Match_columns 110
No_of_seqs 109 out of 831
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zom_A CUTA1, protein CUTA, ch 100.0 3.8E-49 1.3E-53 275.2 12.9 110 1-110 1-112 (113)
2 3ahp_A CUTA1; thermostable pro 100.0 3.5E-48 1.2E-52 268.5 12.9 106 5-110 1-108 (108)
3 4e98_A CUTA1 divalent ION tole 100.0 3.7E-48 1.3E-52 278.3 13.2 110 1-110 27-138 (138)
4 1nza_A CUTA, divalent cation t 100.0 1.3E-47 4.4E-52 263.7 12.5 100 10-109 2-103 (103)
5 1naq_A Periplasmic divalent ca 100.0 1.7E-47 5.9E-52 266.4 13.2 105 5-109 6-112 (112)
6 1vhf_A Periplasmic divalent ca 100.0 2.4E-47 8.2E-52 266.2 13.0 100 9-109 2-103 (113)
7 2nuh_A Periplasmic divalent ca 100.0 2.1E-47 7E-52 268.3 12.3 101 9-109 4-106 (118)
8 3gsd_A Divalent-cation toleran 100.0 1.6E-47 5.5E-52 270.2 11.7 100 9-108 20-121 (122)
9 1uku_A CUTA1, periplasmic diva 100.0 4.1E-47 1.4E-51 260.7 12.3 99 11-110 2-102 (102)
10 1p1l_A CUTA, periplasmic dival 100.0 6.7E-47 2.3E-51 259.7 13.0 99 10-109 2-102 (102)
11 1kr4_A Protein TM1056, CUTA; s 100.0 1.4E-46 4.9E-51 266.3 12.3 101 9-110 22-124 (125)
12 1o5j_A Periplasmic divalent ca 100.0 2.3E-46 7.9E-51 261.2 12.9 99 9-108 12-112 (113)
13 1osc_A Similar to divalent cat 100.0 5.6E-46 1.9E-50 263.5 12.1 102 9-110 22-125 (126)
14 2zfh_A CUTA; human brain, trim 100.0 5E-45 1.7E-49 270.7 12.5 103 7-109 65-169 (179)
15 2gx8_A NIF3-related protein; s 93.6 0.28 9.6E-06 39.7 8.0 73 19-92 169-259 (397)
16 2nyd_A UPF0135 protein SA1388; 87.6 0.14 4.6E-06 41.2 0.6 35 55-89 196-230 (370)
17 1v3f_A Pleckstrin 2; three-hel 74.8 3.1 0.00011 28.1 3.6 38 17-54 53-105 (120)
18 2cso_A Pleckstrin; DEP domain, 72.8 4.5 0.00016 27.8 4.1 38 17-54 63-114 (127)
19 2ysr_A DEP domain-containing p 70.2 4 0.00014 26.9 3.2 24 17-40 63-86 (105)
20 1uhw_A Pleckstrin; three-helix 66.1 4.2 0.00015 27.2 2.7 24 17-40 53-76 (109)
21 3dah_A Ribose-phosphate pyroph 66.0 44 0.0015 25.9 9.0 62 4-65 1-63 (319)
22 1fsh_A Dishevelled-1; three-he 61.5 4.6 0.00016 26.5 2.2 24 17-40 67-90 (105)
23 2gu3_A YPMB protein; APC1927, 49.1 41 0.0014 22.8 5.5 57 18-83 11-90 (136)
24 1tr0_A Stable protein 1; plant 47.5 9.2 0.00031 24.4 1.8 77 1-82 1-84 (108)
25 1b4b_A Arginine repressor; cor 39.3 37 0.0013 20.4 3.6 33 56-91 11-43 (71)
26 2gjh_A Designed protein; oblig 34.8 70 0.0024 18.9 4.1 23 10-32 3-25 (62)
27 3lk4_B F-actin-capping protein 34.0 26 0.00089 27.2 2.7 23 43-65 114-136 (277)
28 3jtn_A YPBH, adapter protein M 33.2 38 0.0013 21.2 3.0 34 13-54 3-36 (91)
29 3aa0_B F-actin-capping protein 31.4 31 0.0011 26.3 2.7 23 42-64 113-135 (244)
30 4akr_B F-actin-capping protein 31.4 30 0.001 27.0 2.7 23 42-64 131-153 (290)
31 2cvi_A 75AA long hypothetical 30.5 59 0.002 19.2 3.5 37 59-100 4-40 (83)
32 2v3s_A Serine/threonine-protei 30.3 15 0.00051 24.3 0.7 24 17-40 24-47 (96)
33 2ixm_A Serine/threonine-protei 25.3 55 0.0019 25.5 3.2 38 63-106 55-92 (303)
34 3aqb_A Component A of hexapren 25.2 24 0.00082 24.9 1.1 23 63-85 5-27 (147)
35 3ts9_A Interferon-induced heli 25.0 35 0.0012 23.8 1.8 16 92-107 30-45 (138)
36 1mwq_A Hypothetical protein HI 23.2 71 0.0024 19.7 3.0 33 10-42 61-95 (101)
37 2yhg_A SDE_182CT, cellulose-bi 23.0 6 0.0002 32.5 -2.8 84 11-100 30-117 (437)
38 2pbi_A Regulator of G-protein 22.9 64 0.0022 26.0 3.3 35 19-53 68-107 (424)
39 1rq8_A Conserved hypothetical 22.4 1.7E+02 0.0057 19.1 5.1 38 13-50 48-85 (104)
40 3mml_B Allophanate hydrolase s 21.7 1.5E+02 0.0051 21.9 4.9 38 13-50 32-69 (228)
41 3tjr_A Short chain dehydrogena 21.7 78 0.0027 23.1 3.4 30 5-34 26-55 (301)
42 2zbc_A 83AA long hypothetical 21.3 89 0.003 18.0 3.0 36 59-99 4-39 (83)
43 1gh9_A 8.3 kDa protein (gene M 21.3 30 0.001 21.3 0.8 23 13-35 37-59 (71)
44 2ixn_A Serine/threonine-protei 21.3 59 0.002 25.4 2.7 39 63-106 52-91 (310)
45 3ml6_A Chimeric complex betwee 21.2 49 0.0017 26.1 2.3 24 17-40 55-78 (385)
46 3pxx_A Carveol dehydrogenase; 21.1 84 0.0029 22.2 3.4 33 2-34 2-34 (287)
No 1
>2zom_A CUTA1, protein CUTA, chloroplast, putative, expressed; trimeric structure, protein stability, unknown function; 3.02A {Oryza sativa subsp}
Probab=100.00 E-value=3.8e-49 Score=275.18 Aligned_cols=110 Identities=81% Similarity=1.210 Sum_probs=102.7
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHH
Q 033860 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVK 78 (110)
Q Consensus 1 ~~~~~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~ 78 (110)
|+++++..++++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+ +++|++|+|||+.+++++|.++|+
T Consensus 1 ~~~~~~~~~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~ 80 (113)
T 2zom_A 1 MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVK 80 (113)
T ss_dssp ----CCSCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred CCCcCCCCCEEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEeCCEEeEeeEEEEEEEECHHHHHHHHHHHH
Confidence 788888778999999999999999999999999999999999889999999999 999999999999999999999999
Q ss_pred HhCCCccceEEEEeCCCCCHhHHHHHHhhcCC
Q 033860 79 ANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 79 ~~HpYevPeIi~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
++||||+|||+++|+.+|+++|++||.+++++
T Consensus 81 ~~HpYevPeIi~lpi~~g~~~Yl~Wi~~~~~~ 112 (113)
T 2zom_A 81 ANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 112 (113)
T ss_dssp HTCSSSSCCCEEEECCCCCHHHHHHHHHHCC-
T ss_pred HHCCCcCCEEEEEEccCCCHHHHHHHHHHccC
Confidence 99999999999999999999999999999863
No 2
>3ahp_A CUTA1; thermostable protein, electron transport; 2.70A {Shewanella}
Probab=100.00 E-value=3.5e-48 Score=268.48 Aligned_cols=106 Identities=33% Similarity=0.636 Sum_probs=100.6
Q ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCC
Q 033860 5 SKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHE 82 (110)
Q Consensus 5 ~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~Hp 82 (110)
|+..++++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+ +++|++|+|||+.+++++|.++|+++||
T Consensus 1 ~~~~~~~~V~tT~p~~~~A~~ia~~Lve~rLAACvni~p~i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~I~~~Hp 80 (108)
T 3ahp_A 1 MYKPEQLLIFTTCPDADIACRIATALVEAKLAACVQIGQAVESIYQWDNNICQSHEVPMQIKCMTTDYPAIEQLVITMHP 80 (108)
T ss_dssp --CCSEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEECSCEEEEEESSSSEEEEEEEEEEEEEEGGGHHHHHHHHHHHSS
T ss_pred CCcCcEEEEEEecCCHHHHHHHHHHHHhCCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCC
Confidence 44556899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CccceEEEEeCCCCCHhHHHHHHhhcCC
Q 033860 83 YDVPEVIALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 83 YevPeIi~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
||+|||+++|+.+|+++|++||.+++++
T Consensus 81 YevPeIi~lpi~~g~~~Yl~Wi~~~~~~ 108 (108)
T 3ahp_A 81 YEVPEFIATPIIGGFGPYLQWIKDNSPS 108 (108)
T ss_dssp SSSCCEEEEEECEECHHHHHHHHTTCCC
T ss_pred CcCCEEEEEEccCCCHHHHHHHHHhcCC
Confidence 9999999999999999999999998864
No 3
>4e98_A CUTA1 divalent ION tolerance protein; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, signaling protein; 2.00A {Cryptosporidium parvum}
Probab=100.00 E-value=3.7e-48 Score=278.26 Aligned_cols=110 Identities=32% Similarity=0.715 Sum_probs=104.2
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHH
Q 033860 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVK 78 (110)
Q Consensus 1 ~~~~~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~ 78 (110)
|++...++++++|+||+||.++|++|||.||++||||||||+|+|+|+|+|+|+ +++|++|+|||+.+++++|+++|+
T Consensus 27 ~~~~~~~~~~~lV~tT~p~~e~A~~IA~~LVe~rLAACVnI~p~i~SiY~WeG~Ie~~~E~~LliKT~~~~~~~L~~~I~ 106 (138)
T 4e98_A 27 MTETKIESNIILIYISAPNQDEATSIAKTLVDEELCACVSIIPSVRSIYKFKGQVHDENEVMLLVKTTSQLFTTLKEKVT 106 (138)
T ss_dssp -CCCCSCCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred CccccCCCCEEEEEEecCCHHHHHHHHHHHHHCCceeEEEecCCeeEEEEeCCeeeEceEEEEEEEECHHHHHHHHHHHH
Confidence 566666777899999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HhCCCccceEEEEeCCCCCHhHHHHHHhhcCC
Q 033860 79 ANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 79 ~~HpYevPeIi~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
++||||+|||+++|+..|+++|++||.+++++
T Consensus 107 e~HPYevPeIi~lpi~~g~~~YL~Wi~~~t~~ 138 (138)
T 4e98_A 107 EIHSYELPEIIATKVVYGNENYINWVNQTVRS 138 (138)
T ss_dssp HHCSSSSCCEEEEECCEECHHHHHHHHHHCC-
T ss_pred HHCCCcCcEEEEEEcccCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999863
No 4
>1nza_A CUTA, divalent cation tolerance protein; cellular tolerance, monomer, structural genomics, RIKE structural genomics/proteomics initiative; 1.70A {Thermus thermophilus} SCOP: d.58.5.2 PDB: 1v6h_A
Probab=100.00 E-value=1.3e-47 Score=263.69 Aligned_cols=100 Identities=48% Similarity=0.899 Sum_probs=97.5
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccce
Q 033860 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 87 (110)
Q Consensus 10 ~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevPe 87 (110)
.++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+ +++|+.|+|||+.+++++|.++|+++||||+||
T Consensus 2 ~~~V~tT~p~~~~A~~ia~~Lve~rLAACvni~p~i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~i~~~HpYevPe 81 (103)
T 1nza_A 2 EEVVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVPE 81 (103)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEESSSCEEEEEEEEEEEEEETTTHHHHHHHHHHHSSSSSCC
T ss_pred eEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEECCEeeeceEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 489999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhHHHHHHhhcC
Q 033860 88 VIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 88 Ii~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
|+++|+.+|+++|++|+.++++
T Consensus 82 Ii~~pi~~g~~~Yl~Wi~~~~~ 103 (103)
T 1nza_A 82 IVALPIAEGNREYLDWLRENTG 103 (103)
T ss_dssp EEEEECCCCCHHHHHHHHHTCC
T ss_pred EEEEEccCCCHHHHHHHHHhcC
Confidence 9999999999999999999874
No 5
>1naq_A Periplasmic divalent cation tolerance protein CUTA; copper resistance, structural proteomics in europe, spine, structural genomics; HET: MBO; 1.70A {Escherichia coli} SCOP: d.58.5.2 PDB: 3ah6_A 3aa9_A 3aa8_A 3opk_A
Probab=100.00 E-value=1.7e-47 Score=266.45 Aligned_cols=105 Identities=39% Similarity=0.733 Sum_probs=99.9
Q ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCC
Q 033860 5 SKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHE 82 (110)
Q Consensus 5 ~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~Hp 82 (110)
..+.++++|+||+||.++|++|||.||++|||||||++|+|+|+|+|+|+ +++|++|+|||+.+++++|.++|+++||
T Consensus 6 ~~~~~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~Hp 85 (112)
T 1naq_A 6 SSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHP 85 (112)
T ss_dssp -CCCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHST
T ss_pred cCCCCEEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCC
Confidence 34445799999999999999999999999999999999889999999999 9999999999999999999999999999
Q ss_pred CccceEEEEeCCCCCHhHHHHHHhhcC
Q 033860 83 YDVPEVIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 83 YevPeIi~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
||+|||+++|+.+|+++|++||.++++
T Consensus 86 YevPeIi~lpi~~g~~~Yl~Wi~~~~~ 112 (112)
T 1naq_A 86 YQTPELLVLPVTHGDTDYLSWLNASLR 112 (112)
T ss_dssp TSCCCEEEEECCBCCHHHHHHHHHHTC
T ss_pred CcCCEEEEEEcccCCHHHHHHHHHhcC
Confidence 999999999999999999999999874
No 6
>1vhf_A Periplasmic divalent cation tolerance protein; structural genomics, unknown function; 1.54A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=2.4e-47 Score=266.21 Aligned_cols=100 Identities=33% Similarity=0.591 Sum_probs=97.1
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
++++|+||+||.++|++|||.||++|||||||++ +|+|+|+|+|+ +++|++|+|||+.+++++|.++|+++||||+|
T Consensus 2 ~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~-~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 80 (113)
T 1vhf_A 2 SLILVYSTFPNEEKALEIGRKLLEKRLIACFNAF-EIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETP 80 (113)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEE-EEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred cEEEEEEecCCHHHHHHHHHHHHHCCeEEEEEEe-eeeEEEEECCEeeeCeEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 4799999999999999999999999999999999 79999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhcC
Q 033860 87 EVIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
||+++|+..|+++|++||.++++
T Consensus 81 eIi~lpi~~g~~~Yl~Wi~~~t~ 103 (113)
T 1vhf_A 81 AIFTLKVENVLTEYMNWLRESVL 103 (113)
T ss_dssp CEEEEECSCCCHHHHHHHHHHC-
T ss_pred EEEEEEccCCCHHHHHHHHHHcC
Confidence 99999999999999999999986
No 7
>2nuh_A Periplasmic divalent cation tolerance protein; CUTA, unknown function; 1.39A {Xylella fastidiosa}
Probab=100.00 E-value=2.1e-47 Score=268.26 Aligned_cols=101 Identities=31% Similarity=0.624 Sum_probs=98.6
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
++++|+||+||.++|++|||.||++||||||||+|+|+|+|+|+|+ +++|++|+|||+.+++++|+++|+++||||+|
T Consensus 4 ~~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 83 (118)
T 2nuh_A 4 DVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAVSTYRWQGKIETTQEIQLLIKTNAVHVNAAITRLCALHPYRLP 83 (118)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEESSSSEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred cEEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEECCEeeeCeEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 3699999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhcC
Q 033860 87 EVIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
||+++|+..|+++|++||.++++
T Consensus 84 eIi~lpi~~g~~~Yl~Wi~~~t~ 106 (118)
T 2nuh_A 84 EAIAVQVSVGLPEYLTWINTEID 106 (118)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHC
T ss_pred EEEEEEccCCCHHHHHHHHHHcC
Confidence 99999999999999999999886
No 8
>3gsd_A Divalent-cation tolerance protein CUTA; IDP00456, metal-BIN structural genomics, center for structural genomics of INFE diseases, csgid; HET: EPE; 2.05A {Yersinia pestis CO92} SCOP: d.58.5.2
Probab=100.00 E-value=1.6e-47 Score=270.17 Aligned_cols=100 Identities=36% Similarity=0.725 Sum_probs=97.7
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
++++|+||+||.++|++|||.||++||||||||+|+|+|+|+|+|+ +++|+.|+|||+.+++++|.++|+++||||+|
T Consensus 20 ~~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p~i~S~Y~W~G~ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 99 (122)
T 3gsd_A 20 NAIVVLCTAPDEASAQNLAAQVLGEKLAACVTLLPGATSLYYWEGKLEQEYEVQLLFKSNTDHQQALLTYIKQHHPYQTP 99 (122)
T ss_dssp SEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHSCSSSSC
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHCCceEEEEecCCeeEEEEECCEEeEceEEEEEEEEcHHHHHHHHHHHHHHCCCcCc
Confidence 3699999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhc
Q 033860 87 EVIALPITGGSQPYLEWLKSST 108 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~ 108 (110)
||+++|+..|+++|++||.+++
T Consensus 100 eIi~lpi~~g~~~Yl~Wi~~~~ 121 (122)
T 3gsd_A 100 ELLVLPVRDGDKDYLSWLNASL 121 (122)
T ss_dssp CCEEEECCEECHHHHHHHHHHC
T ss_pred EEEEEEcccCCHHHHHHHHHhc
Confidence 9999999999999999999876
No 9
>1uku_A CUTA1, periplasmic divalent cation tolerance protein CUT; copper tolerance, structural genomics, metal binding P; 1.45A {Pyrococcus horikoshii} SCOP: d.58.5.2 PDB: 1umj_A 1v99_A* 1v9b_A 1j2v_A 2e66_A
Probab=100.00 E-value=4.1e-47 Score=260.73 Aligned_cols=99 Identities=37% Similarity=0.700 Sum_probs=96.8
Q ss_pred EEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccceE
Q 033860 11 IVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVPEV 88 (110)
Q Consensus 11 ~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevPeI 88 (110)
++|+||+||.++|++|||.||++|||||||++|+ +|+|+|+|+ +++|+.|+|||+.+++++|.++|+++||||+|||
T Consensus 2 ~~V~~T~p~~~~A~~ia~~Lve~rLAACvni~p~-~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~i~~~HpYevPeI 80 (102)
T 1uku_A 2 IIVYTTFPDWESAEKVVKTLLKERLIACANLREH-RAFYWWEGKIEEDKEVGAILKTREDLWEELKERIKELHPYDVPAI 80 (102)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEE-EEEEEETTEEEEEEEEEEEEEECGGGHHHHHHHHHHHCSSSSCCC
T ss_pred EEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCC-ceEEEECCEeeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCCEE
Confidence 7999999999999999999999999999999999 999999999 9999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhHHHHHHhhcCC
Q 033860 89 IALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 89 i~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
+++|+.+|+++|++||.++++.
T Consensus 81 i~~pi~~g~~~Yl~Wi~~~~~~ 102 (102)
T 1uku_A 81 IRIDVDDVNEDYLKWLIEETKK 102 (102)
T ss_dssp EEEECSCCCHHHHHHHHHHSCC
T ss_pred EEEECcCCCHHHHHHHHHhcCC
Confidence 9999999999999999999863
No 10
>1p1l_A CUTA, periplasmic divalent cation tolerance protein CUT; NYSGXRC, PSI, protein structure initiative; 2.00A {Archaeoglobus fulgidus} SCOP: d.58.5.2
Probab=100.00 E-value=6.7e-47 Score=259.69 Aligned_cols=99 Identities=34% Similarity=0.713 Sum_probs=96.7
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccce
Q 033860 10 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVPE 87 (110)
Q Consensus 10 ~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevPe 87 (110)
+++|+||+||.++|++|||.||++|||||||++| |+|+|+|+|+ +++|+.|+|||+.+++++|.++|+++||||+||
T Consensus 2 ~~~V~~T~p~~~~A~~ia~~Lve~rLAACvni~p-i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevPe 80 (102)
T 1p1l_A 2 HNFIYITAPSLEEAERIAKRLLEKKLAACVNIFP-IKSFFWWEGKIEAATEFAMIVKTRSEKFAEVRDEVKAMHSYTTPC 80 (102)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSCC
T ss_pred EEEEEEecCCHHHHHHHHHHHHhCCeEEEEEecc-ceEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCCE
Confidence 5899999999999999999999999999999998 9999999999 999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhHHHHHHhhcC
Q 033860 88 VIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 88 Ii~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
|+++|+.+|+++|++|+.++++
T Consensus 81 Ii~lpi~~g~~~Yl~Wi~~~~~ 102 (102)
T 1p1l_A 81 ICAIPIERGLKEFLDWIDETVE 102 (102)
T ss_dssp EEEEECCCCCHHHHHHHHHHHC
T ss_pred EEEEEccCCCHHHHHHHHHhcC
Confidence 9999999999999999999864
No 11
>1kr4_A Protein TM1056, CUTA; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.40A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=1.4e-46 Score=266.26 Aligned_cols=101 Identities=33% Similarity=0.580 Sum_probs=98.5
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
++++|+||+||.++|++|||.||++|||||||++| |+|+|+|+|+ +++|++|+|||+.+++++|.++|+++||||+|
T Consensus 22 ~~~lV~tT~p~~e~A~~iA~~Lve~rLAACVni~p-i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~L~~~I~e~HpYevP 100 (125)
T 1kr4_A 22 HMILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETP 100 (125)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred ccEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecc-ceEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 57999999999999999999999999999999998 9999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhcCC
Q 033860 87 EVIALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
||+++|+..|+++|++||.+++++
T Consensus 101 eIi~lpi~~g~~~YL~Wi~~~t~~ 124 (125)
T 1kr4_A 101 AIFTLKVENILTEYMNWLRESVLG 124 (125)
T ss_dssp CEEEECCCCEEHHHHHHHHHHTSC
T ss_pred EEEEEEccCCCHHHHHHHHHhccC
Confidence 999999999999999999999864
No 12
>1o5j_A Periplasmic divalent cation tolerance protein; TM1056, struc genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.5.2
Probab=100.00 E-value=2.3e-46 Score=261.25 Aligned_cols=99 Identities=33% Similarity=0.603 Sum_probs=96.6
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
.+++|+||+||.++|++|||.||++|||||||++| |+|+|+|+|+ +++|++|+|||+.+++++|.++|+++||||+|
T Consensus 12 ~~~lV~tT~p~~e~A~~iA~~Lve~rLAACvni~p-i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~L~~~I~~~HpYevP 90 (113)
T 1o5j_A 12 HMILVYSTFPNEEKALEIGRKLLEKRLIACFNAFE-IRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETP 90 (113)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEE-EEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSC
T ss_pred eEEEEEEecCCHHHHHHHHHHHHhCCeEEEEEEcc-ccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 36999999999999999999999999999999997 9999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhc
Q 033860 87 EVIALPITGGSQPYLEWLKSST 108 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~ 108 (110)
||+++|+..|+++|++|+.+++
T Consensus 91 eIi~lpi~~g~~~Yl~Wi~~~~ 112 (113)
T 1o5j_A 91 AIFTLKVENVLTEYMNWLRESV 112 (113)
T ss_dssp CEEEEECCCCCHHHHHHHHHHH
T ss_pred EEEEEEccCCCHHHHHHHHHhc
Confidence 9999999999999999999875
No 13
>1osc_A Similar to divalent cation tolerant protein CUTA; copper resistance, structural proteomics in europe, spine, structural genomics; 2.15A {Rattus norvegicus} SCOP: d.58.5.2
Probab=100.00 E-value=5.6e-46 Score=263.49 Aligned_cols=102 Identities=47% Similarity=0.880 Sum_probs=99.3
Q ss_pred CeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCccc
Q 033860 9 PSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYDVP 86 (110)
Q Consensus 9 ~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevP 86 (110)
++++|+||+||.++|++||+.||++|||||||++|+|+|+|||+|+ +++|++|+|||+.+++++|.++|+++||||+|
T Consensus 22 ~~~~V~tT~p~~e~A~~iA~~Lve~rLAACvni~p~i~S~Y~W~G~Ie~~~E~~l~iKT~~~~~~~l~~~I~~~HpYevP 101 (126)
T 1osc_A 22 SVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVA 101 (126)
T ss_dssp SEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHTTCSSSSC
T ss_pred ceEEEEEecCCHHHHHHHHHHHHHCCeEEEEEecCCccEEEEeCCEEeEceEEEEEEEECHHHHHHHHHHHHHHCCCcCC
Confidence 4799999999999999999999999999999999889999999999 99999999999999999999999999999999
Q ss_pred eEEEEeCCCCCHhHHHHHHhhcCC
Q 033860 87 EVIALPITGGSQPYLEWLKSSTRD 110 (110)
Q Consensus 87 eIi~~~i~~~~~~Yl~Wi~~~~~~ 110 (110)
||+++|+.+|+++|++||.+++++
T Consensus 102 eIi~lpi~~g~~~Yl~Wi~~~t~~ 125 (126)
T 1osc_A 102 EVIALPVEQGNPPYLHWVHQVTES 125 (126)
T ss_dssp CEEEEEECEECHHHHHHHHHHHCC
T ss_pred EEEEEEcccCCHHHHHHHHHHhcc
Confidence 999999999999999999999864
No 14
>2zfh_A CUTA; human brain, trimeric structure, structural genomics; 2.05A {Homo sapiens} SCOP: d.58.5.2 PDB: 1xk8_A
Probab=100.00 E-value=5e-45 Score=270.66 Aligned_cols=103 Identities=46% Similarity=0.859 Sum_probs=99.5
Q ss_pred CCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC--CCceeEEEeeeccchHHHHHHHHHHhCCCc
Q 033860 7 TVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE--TDAEELLIIKTRQSLLETLTEHVKANHEYD 84 (110)
Q Consensus 7 ~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~HpYe 84 (110)
+.++++|+||+||+++|++|||.||++||||||||+|+|+|+|+|+|+ +++|+.|+|||+.+++++|+++|+++||||
T Consensus 65 ~~~~ilV~tT~pd~e~A~~IAr~LVE~rLAACVNI~P~I~SiY~WeGkIeed~Ev~LiIKT~~~~~~~L~~~I~elHPYE 144 (179)
T 2zfh_A 65 PGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYE 144 (179)
T ss_dssp TTSEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSS
T ss_pred CCCeEEEEEecCCHHHHHHHHHHHHhcCeEEEEEecCCccEEEEECCeeeeceEEEEEEEECHHHHHHHHHHHHHHCCCc
Confidence 335799999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cceEEEEeCCCCCHhHHHHHHhhcC
Q 033860 85 VPEVIALPITGGSQPYLEWLKSSTR 109 (110)
Q Consensus 85 vPeIi~~~i~~~~~~Yl~Wi~~~~~ 109 (110)
+|||+++|+.+|+++|++||.++++
T Consensus 145 vPEIIalPI~~G~~~YL~WI~e~t~ 169 (179)
T 2zfh_A 145 VAEVIALPVEQGNFPYLQWVRQVTE 169 (179)
T ss_dssp SCCEEEEEECEECHHHHHHHHHTTC
T ss_pred CCEEEEEEccCCCHHHHHHHHHHcC
Confidence 9999999999999999999999875
No 15
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=93.62 E-value=0.28 Score=39.71 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhccccc------eEeecCCceEEEE-------e---cCC--CCceeEEEeeeccchHHHHHHHHHHh
Q 033860 19 NKEAGKKLAESIVKAKLAA------CVNRVPGIESVYE-------W---KGE--TDAEELLIIKTRQSLLETLTEHVKAN 80 (110)
Q Consensus 19 ~~e~A~~ia~~lve~rLaA------Cvni~~~v~S~Y~-------W---~G~--~~~E~~l~~KT~~~~~~~l~~~I~~~ 80 (110)
..+.++++.++|-+.+-.. |.--.+ -+..|+ . .|+ ..+|+++.+=....+..++.+.+++.
T Consensus 169 p~~~~~~v~~al~~aGag~ig~y~~csf~~~-G~G~F~p~~~a~P~iG~~g~~~~v~e~rie~i~p~~~~~~v~~al~~~ 247 (397)
T 2gx8_A 169 PVTHAEEVRKALGDAGAGHIGNYSHCTFSSE-GTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTA 247 (397)
T ss_dssp CHHHHHHHHHHHHHTTTTCBTTEEEEEEEEE-EEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred cchhhHHHHHHhhhccccccccccccccccc-cceeeccccCCCCccCCcCcccccceeEEEEEecHHHHHHHHHHHHHh
Confidence 3677889999888865332 222221 222333 1 133 67899999999999999999999999
Q ss_pred CCCccceEEEEe
Q 033860 81 HEYDVPEVIALP 92 (110)
Q Consensus 81 HpYevPeIi~~~ 92 (110)
||||.|..-..|
T Consensus 248 HPyee~ayd~~~ 259 (397)
T 2gx8_A 248 HPYEEVAYDVYP 259 (397)
T ss_dssp SSSSSCCEEEEE
T ss_pred CCcccccccccc
Confidence 999999644443
No 16
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=87.62 E-value=0.14 Score=41.16 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=20.8
Q ss_pred CCceeEEEeeeccchHHHHHHHHHHhCCCccceEE
Q 033860 55 TDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVI 89 (110)
Q Consensus 55 ~~~E~~l~~KT~~~~~~~l~~~I~~~HpYevPeIi 89 (110)
..+|+++.+=.......++.+.+++.||||.|..-
T Consensus 196 ~v~e~rie~i~~~~~~~~v~~al~~~hpyee~ayd 230 (370)
T 2nyd_A 196 DVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFD 230 (370)
T ss_dssp -------CEEECSTHHHHHHHHHCC-----CCCCC
T ss_pred cccceEEEEEechhhHHHHHHHHHhhCCccccccc
Confidence 66899999999999999999999999999999643
No 17
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=74.81 E-value=3.1 Score=28.05 Aligned_cols=38 Identities=11% Similarity=0.194 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHhccccceEe---------------ecCCceEEEEecCC
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN---------------RVPGIESVYEWKGE 54 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn---------------i~~~v~S~Y~W~G~ 54 (110)
+.++++|..+++.|+++++.-.|. ....=.++|++...
T Consensus 53 ~~sR~eAv~lgq~Ll~~G~i~hV~~~s~~~~~~~~~~~~f~d~~~~lYrF~~~ 105 (120)
T 1v3f_A 53 AASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFAES 105 (120)
T ss_dssp CSSHHHHHHHHHHHHHHTSEEECSSSSCSSCCCSSCCCCCCCSSSCEEEECSS
T ss_pred CCCHHHHHHHHHHHHHCCCeEEccccccccccccccccceecCCccEEEeChh
Confidence 578999999999999999999886 12212378998764
No 18
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=72.84 E-value=4.5 Score=27.81 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHHHHhccccceE--------------eecCCceEEEEecCC
Q 033860 17 VPNKEAGKKLAESIVKAKLAACV--------------NRVPGIESVYEWKGE 54 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACv--------------ni~~~v~S~Y~W~G~ 54 (110)
+.|+++|..+++.|++.++.-+| +...+=.++|+....
T Consensus 63 ~~sR~EAv~lg~~Ll~~G~i~hV~d~s~~~~~~~~~~~f~dd~~~lYrF~~~ 114 (127)
T 2cso_A 63 VRNRQEGLMIASSLLNEGYLQPAGDMSKSAVDGTAENPFLDNPDAFYYFPDS 114 (127)
T ss_dssp CSSHHHHHHHHHHHHHHTSSEEESHHHHHHHHSSCSCCCCCCTTCEEECSSS
T ss_pred CCCHHHHHHHHHHHHHCCeEEeCccccccccccccccceecCCCcEEEecCC
Confidence 46899999999999999999999 223333589998754
No 19
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.23 E-value=4 Score=26.89 Aligned_cols=24 Identities=8% Similarity=0.149 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN 40 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn 40 (110)
+.++++|..+++.|+++++.-.|.
T Consensus 63 ~~sR~eAv~lgq~Ll~~gvi~hV~ 86 (105)
T 2ysr_A 63 EVTRQQTIQLLRKFLKNHVIEDIK 86 (105)
T ss_dssp TCCHHHHHHHHHHHHHTTSSEESS
T ss_pred cCCHHHHHHHHHHHHHCCCeEecc
Confidence 468999999999999999999985
No 20
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=66.07 E-value=4.2 Score=27.25 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN 40 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn 40 (110)
+.|+++|..+++.|++.++.-+|.
T Consensus 53 ~~~R~EAv~lgq~Ll~~G~i~hV~ 76 (109)
T 1uhw_A 53 VRNRQEGLMISASLLSEGYLQPAG 76 (109)
T ss_dssp SSSHHHHHHHHHHHHHHTSSEECS
T ss_pred CCCHHHHHHHHHHHHHCCeEEeCc
Confidence 568999999999999999999993
No 21
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=65.97 E-value=44 Score=25.86 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=36.3
Q ss_pred CCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC-CCceeEEEeee
Q 033860 4 NSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE-TDAEELLIIKT 65 (110)
Q Consensus 4 ~~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~-~~~E~~l~~KT 65 (110)
+|+.|.-+.++....+.+-|++||+.|=-.---+.+.-||.-+..=+=+.. +++.+.++--|
T Consensus 1 ~~~~~~~~~i~~g~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~v~i~esvrg~dV~iiqs~ 63 (319)
T 3dah_A 1 SMSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQST 63 (319)
T ss_dssp -----CCEEEEECSSCHHHHHHHHHHHTSCCCCEEEEECTTSCEEEEECSCCBTCEEEEECCC
T ss_pred CcccCCceEEEECCCCHHHHHHHHHHhCCceeeeEEEECCCCCEEEEECCCcCCCeEEEEccC
Confidence 356665678888999999999999998433333345556654544333333 56666555444
No 22
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31
Probab=61.45 E-value=4.6 Score=26.53 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN 40 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn 40 (110)
+.|+++|..+|+.|++.++.-+|.
T Consensus 67 ~~~r~eAv~lg~~Ll~~G~I~hv~ 90 (105)
T 1fsh_A 67 FKERREARKYASSMLKHGFLRHTV 90 (105)
T ss_dssp CSSHHHHHHHHHHHHHTTTEECSS
T ss_pred CCCHHHHHHHHHHHHHCCcEEEcC
Confidence 478999999999999999998874
No 23
>2gu3_A YPMB protein; APC1927, structural genomics, PSI, protein structure initiat midwest center for structural genomics, MCSG, unknown funct; 1.74A {Bacillus subtilis subsp} SCOP: d.17.1.6 d.17.1.6
Probab=49.10 E-value=41 Score=22.82 Aligned_cols=57 Identities=11% Similarity=0.124 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC-----------CCceeEEEeeeccch------------HHHHH
Q 033860 18 PNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE-----------TDAEELLIIKTRQSL------------LETLT 74 (110)
Q Consensus 18 p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~-----------~~~E~~l~~KT~~~~------------~~~l~ 74 (110)
..+++|.++|+.= ..+.. |+++|+|+|+ ..++..+++--..+. -++++
T Consensus 11 ~~~~~a~~~Ak~~--------~~l~~-v~~~~~y~g~~tYyvv~G~~~~g~~~~V~Vp~~~~~v~~v~~~~~GiSe~~a~ 81 (136)
T 2gu3_A 11 EGHEAAAAEAKKE--------TDLAH-VDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGISEDKAA 81 (136)
T ss_dssp TTHHHHHHHHHHH--------SSEEE-EEEEEEEESSSEEEEEEEEETTCCEEEEEEESSTTSCCEEEEGGGSCCHHHHH
T ss_pred HHHHHHHHHHHHh--------CCceE-EeeEEEECCceEEEEEEEEcCCCCEEEEEEECCCCeEEEEEEHhhCCCHHHHH
Confidence 3456677777765 56664 8999999874 567777777322111 24566
Q ss_pred HHHHHhCCC
Q 033860 75 EHVKANHEY 83 (110)
Q Consensus 75 ~~I~~~HpY 83 (110)
+.++..||-
T Consensus 82 ~~v~~~~~~ 90 (136)
T 2gu3_A 82 KIIKDEGLV 90 (136)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhCCc
Confidence 778777763
No 24
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=47.54 E-value=9.2 Score=24.40 Aligned_cols=77 Identities=8% Similarity=0.129 Sum_probs=40.4
Q ss_pred CCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCCCC-------ceeEEEeeeccchHHHH
Q 033860 1 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGETD-------AEELLIIKTRQSLLETL 73 (110)
Q Consensus 1 ~~~~~~~~~~~lv~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~~~-------~E~~l~~KT~~~~~~~l 73 (110)
|..+++.|-.-+|+.++.+...++++ .-+.++|.+..+.+|+|.|+- |--..+ .-+-..+-+.=+..+.+
T Consensus 1 m~~~~~~mi~HiVlfklk~~~~~~~~--~~~~~~l~~L~~~ip~i~~~~-~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l 77 (108)
T 1tr0_A 1 MATRTPKLVKHTLLTRFKDEITREQI--DNYINDYTNLLDLIPSMKSFN-WGTDLGMESAELNRGYTHAFESTFESKSGL 77 (108)
T ss_dssp --CCCCCCEEEEEEEEECTTCCHHHH--HHHHHHHHHHHHHCTTCCEEE-EEECCSCSCTTTTTTCCEEEEEEESSHHHH
T ss_pred CCCCCCCcEEEEEEEEECCCCCHHHH--HHHHHHHHHHhhcCCceEEEE-EccCCCccccccCCCccEEEEEEECCHHHH
Confidence 56556655556777777655444443 333444566665568898863 322222 23444444444445666
Q ss_pred HHHHHHhCC
Q 033860 74 TEHVKANHE 82 (110)
Q Consensus 74 ~~~I~~~Hp 82 (110)
..+.. ||
T Consensus 78 ~~Y~~--hP 84 (108)
T 1tr0_A 78 QEYLD--SA 84 (108)
T ss_dssp HHHHT--CH
T ss_pred HHHhC--CH
Confidence 65543 55
No 25
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=39.34 E-value=37 Score=20.45 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=26.9
Q ss_pred CceeEEEeeeccchHHHHHHHHHHhCCCccceEEEE
Q 033860 56 DAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIAL 91 (110)
Q Consensus 56 ~~E~~l~~KT~~~~~~~l~~~I~~~HpYevPeIi~~ 91 (110)
..+..+++||.+.....+...|-+.+ .|+|+..
T Consensus 11 ~~~n~vVikT~pG~A~~va~~iD~~~---~~eI~GT 43 (71)
T 1b4b_A 11 GTGNLLVLRTLPGNAHAIGVLLDNLD---WDEIVGT 43 (71)
T ss_dssp EETTEEEEEESTTCHHHHHHHHHHHC---CTTEEEE
T ss_pred ecCCEEEEEeCCCcHHHHHHHHHhCC---CCCeEEE
Confidence 35778999999999999999888875 5777654
No 26
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=34.77 E-value=70 Score=18.87 Aligned_cols=23 Identities=22% Similarity=0.413 Sum_probs=19.8
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHh
Q 033860 10 SIVVYVTVPNKEAGKKLAESIVK 32 (110)
Q Consensus 10 ~~lv~tT~p~~e~A~~ia~~lve 32 (110)
.+-+-+|.-...+|++.|..|+.
T Consensus 3 rvrisitartkkeaekfaailik 25 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIK 25 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHH
T ss_pred eEEEEEEecchhHHHHHHHHHHH
Confidence 56678899999999999998874
No 27
>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B
Probab=33.97 E-value=26 Score=27.18 Aligned_cols=23 Identities=30% Similarity=0.628 Sum_probs=15.6
Q ss_pred CCceEEEEecCCCCceeEEEeee
Q 033860 43 PGIESVYEWKGETDAEELLIIKT 65 (110)
Q Consensus 43 ~~v~S~Y~W~G~~~~E~~l~~KT 65 (110)
++|.|+|.|+-+++-=-.++||=
T Consensus 114 GGvSSVYlWdld~gFagvvLiKK 136 (277)
T 3lk4_B 114 GGVSSVYLWDLDHGFAGVILIKK 136 (277)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEE
T ss_pred CCeeEEEEEecCCCeEEEEEEEe
Confidence 57999999975544334466653
No 28
>3jtn_A YPBH, adapter protein MECA 2; adaptor protein, competence, sporulation, protein binding; 2.09A {Bacillus subtilis} PDB: 3jto_A
Probab=33.15 E-value=38 Score=21.18 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=25.9
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC
Q 033860 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE 54 (110)
Q Consensus 13 v~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~ 54 (110)
+...++|.|+.-++|+.+-. ......++|.++|+
T Consensus 3 ~i~~F~~~edvI~~a~~l~~--------~~~~~s~LYk~~~~ 36 (91)
T 3jtn_A 3 IIYQFHSFEDIIQLSESLQR--------IGITGGTVYHYDGQ 36 (91)
T ss_dssp EEEEESSHHHHHHHHHHHHH--------TTCCCCEEEEETTE
T ss_pred EEEECCCHHHHHHHHHHccc--------cCCCCceeEEECCE
Confidence 45678999999999998732 22346899999987
No 29
>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B
Probab=31.41 E-value=31 Score=26.27 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=14.6
Q ss_pred cCCceEEEEecCCCCceeEEEee
Q 033860 42 VPGIESVYEWKGETDAEELLIIK 64 (110)
Q Consensus 42 ~~~v~S~Y~W~G~~~~E~~l~~K 64 (110)
-++|.|+|.|+-+++-=-.++||
T Consensus 113 eGGvSSVYlWdld~gFag~vLiK 135 (244)
T 3aa0_B 113 EGGVSSVYLWDLDHGFAGVILIK 135 (244)
T ss_dssp SSSEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcceEEEEecCCCceEEEEEE
Confidence 35699999997544433344555
No 30
>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum}
Probab=31.41 E-value=30 Score=26.98 Aligned_cols=23 Identities=26% Similarity=0.606 Sum_probs=15.7
Q ss_pred cCCceEEEEecCCCCceeEEEee
Q 033860 42 VPGIESVYEWKGETDAEELLIIK 64 (110)
Q Consensus 42 ~~~v~S~Y~W~G~~~~E~~l~~K 64 (110)
-++|.|+|.|+-+.+-=-.++||
T Consensus 131 eGGvSSVYlWdld~gFagvvLiK 153 (290)
T 4akr_B 131 EGGVSSVYCWDLDDNFAAVVLMK 153 (290)
T ss_dssp SSSEEEEEEEEETTEEEEEEEEE
T ss_pred cCCeeEEEEEecCCCceEEEEEE
Confidence 35799999997554444455665
No 31
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=30.52 E-value=59 Score=19.24 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=26.5
Q ss_pred eEEEeeeccchHHHHHHHHHHhCCCccceEEEEeCCCCCHhH
Q 033860 59 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPY 100 (110)
Q Consensus 59 ~~l~~KT~~~~~~~l~~~I~~~HpYevPeIi~~~i~~~~~~Y 100 (110)
..+.+++.....+++.+.|++ .|+|...-...|..+|
T Consensus 4 A~v~v~~~~~~~~~~~~~l~~-----~peV~e~~~vtG~~D~ 40 (83)
T 2cvi_A 4 AFILMVTAAGKEREVMEKLLA-----MPEVKEAYVVYGEYDL 40 (83)
T ss_dssp EEEEEEECTTCHHHHHHHHHT-----STTEEEEEECBSSCSE
T ss_pred EEEEEEEcCCCHHHHHHHHhC-----CCCeeEEEEEcccCCE
Confidence 456778888788888888875 5777777666666443
No 32
>2v3s_A Serine/threonine-protein kinase OSR1; ATP-binding, magnesium, metal-binding, nucleotide-binding, phosphorylation, polymorphism, transferase; 1.70A {Homo sapiens}
Probab=30.26 E-value=15 Score=24.28 Aligned_cols=24 Identities=13% Similarity=0.400 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN 40 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn 40 (110)
.+..+.|+.||+.||...|+-+.-
T Consensus 24 ~~g~DTaegiA~ELv~AgLVDg~D 47 (96)
T 2v3s_A 24 TPGRDTAEGVSQELISAGLVDGRD 47 (96)
T ss_dssp CTTTCCHHHHHHHHHHTTSSCGGG
T ss_pred ecCCCcHHHHHHHHHHCCCccccc
Confidence 466789999999999999986543
No 33
>2ixm_A Serine/threonine-protein phosphatase 2A regulatory subunit B'; 2 PTPA, ppiase, hydrolase activator; 1.5A {Homo sapiens} SCOP: a.268.1.1 PDB: 2hv6_A 2hv7_A* 2g62_A
Probab=25.29 E-value=55 Score=25.49 Aligned_cols=38 Identities=26% Similarity=0.451 Sum_probs=30.2
Q ss_pred eeeccchHHHHHHHHHHhCCCccceEEEEeCCCCCHhHHHHHHh
Q 033860 63 IKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKS 106 (110)
Q Consensus 63 ~KT~~~~~~~l~~~I~~~HpYevPeIi~~~i~~~~~~Yl~Wi~~ 106 (110)
++..-+.++.|.+.|.+..|=+-| -..||++|..|.+.
T Consensus 55 v~~l~~iL~~l~~~i~e~PP~~~p------~RFGN~AfR~w~~~ 92 (303)
T 2ixm_A 55 IEKLLALLNTLDRWIDETPPVDQP------SRFGNKAYRTWYAK 92 (303)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCCS------CSSSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC------CCcCChHHHHHHHH
Confidence 445567788899999998887644 58899999999754
No 34
>3aqb_A Component A of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_A*
Probab=25.25 E-value=24 Score=24.94 Aligned_cols=23 Identities=4% Similarity=-0.005 Sum_probs=19.5
Q ss_pred eeeccchHHHHHHHHHHhCCCcc
Q 033860 63 IKTRQSLLETLTEHVKANHEYDV 85 (110)
Q Consensus 63 ~KT~~~~~~~l~~~I~~~HpYev 85 (110)
++|.+..-++++++++..|||+.
T Consensus 5 ~~tla~Lk~QIe~kL~~~h~Yl~ 27 (147)
T 3aqb_A 5 MRYLHKIELELNRLTSRYPFFKK 27 (147)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCChHHH
Confidence 56777888899999999999964
No 35
>3ts9_A Interferon-induced helicase C domain-containing P; helix bundle, fancm helicase, super family 2 helicase, SF2 H DEXD/H helicase; 2.00A {Mus musculus}
Probab=24.98 E-value=35 Score=23.85 Aligned_cols=16 Identities=25% Similarity=0.349 Sum_probs=13.2
Q ss_pred eCCCCCHhHHHHHHhh
Q 033860 92 PITGGSQPYLEWLKSS 107 (110)
Q Consensus 92 ~i~~~~~~Yl~Wi~~~ 107 (110)
+-+.|++.|-+||.+-
T Consensus 30 ~~dfGTQ~YEQwvV~~ 45 (138)
T 3ts9_A 30 MSDFGTQHYEQWAIQM 45 (138)
T ss_dssp SSCTTSHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHH
Confidence 5678999999999753
No 36
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=23.21 E-value=71 Score=19.72 Aligned_cols=33 Identities=27% Similarity=0.110 Sum_probs=23.0
Q ss_pred eEEEEEeCCCHHHHHHHHHHH--HhccccceEeec
Q 033860 10 SIVVYVTVPNKEAGKKLAESI--VKAKLAACVNRV 42 (110)
Q Consensus 10 ~~lv~tT~p~~e~A~~ia~~l--ve~rLaACvni~ 42 (110)
--+++.-++|.++|+++++.- +..++.+-+.|.
T Consensus 61 Gg~~i~~a~s~eea~~~~~~dP~~~~G~~~~~eVr 95 (101)
T 1mwq_A 61 GSTVIAQFENLQAAKDWAAQDPYVEAGVYADVIVK 95 (101)
T ss_dssp EEEEEEECSSHHHHHHHHHTCHHHHTTCEEEEEEE
T ss_pred eEEEEEEeCCHHHHHHHHHhCChhhcCCcceEEEE
Confidence 467788999999999999874 344444334443
No 37
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=22.96 E-value=6 Score=32.48 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=47.4
Q ss_pred EEEEEeC--CCHHHHHHHHHHHHhccccceEeecCCceEEEEecCC-CCceeEEEeeeccchHHHHHHHHHHh-CCCccc
Q 033860 11 IVVYVTV--PNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGE-TDAEELLIIKTRQSLLETLTEHVKAN-HEYDVP 86 (110)
Q Consensus 11 ~lv~tT~--p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~W~G~-~~~E~~l~~KT~~~~~~~l~~~I~~~-HpYevP 86 (110)
-+|++|= .+.+++..|+|.|+-.. +..+-+=|-+.+.|.+. ...|. +...-+.++++..-++.+ |.|-.|
T Consensus 30 RviI~TDi~nEpDD~~Slvr~Llysn---~~dieGivat~s~~~~~~~~~~~---i~~ii~aY~~v~~nL~~h~~~yP~~ 103 (437)
T 2yhg_A 30 RVIHTTDMGADPDDEQSLVRQLVMAN---EYDLEGIITTTGCWKKSTSNTAY---VDRILNAYSQAYPNLSKHAEGFPTP 103 (437)
T ss_dssp EEEEEECTTSCTHHHHHHHHHHHTGG---GSEEEEEEECCBTTBCCCCCCHH---HHHHHHHHHHHHHHHTTTSTTCCCH
T ss_pred eEEEeCCCCCCCccHHHHHHHHhCcc---cceEeEEEEecccccCCCCCHHH---HHHHHHHHHHHHHHHHhhcCCCCCH
Confidence 4444444 56789999999998642 23333222333457655 22222 222235567777655443 279888
Q ss_pred eEEEEeCCCCCHhH
Q 033860 87 EVIALPITGGSQPY 100 (110)
Q Consensus 87 eIi~~~i~~~~~~Y 100 (110)
+-+.-.+..|++.|
T Consensus 104 ~~Lrs~v~~G~~~y 117 (437)
T 2yhg_A 104 AYLDSINVMGQRGY 117 (437)
T ss_dssp HHHHHTEEECCSSC
T ss_pred HHhhhhhccCCccc
Confidence 86665566666554
No 38
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=22.93 E-value=64 Score=26.04 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHhccccceEee-----cCCceEEEEecC
Q 033860 19 NKEAGKKLAESIVKAKLAACVNR-----VPGIESVYEWKG 53 (110)
Q Consensus 19 ~~e~A~~ia~~lve~rLaACvni-----~~~v~S~Y~W~G 53 (110)
+.++|..+|..|++.++.-+|+= +..=.++|+.+.
T Consensus 68 ~~~EA~~lg~~L~~~Gyi~~v~d~~~~~fk~d~~~Yrfq~ 107 (424)
T 2pbi_A 68 SNLEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQT 107 (424)
T ss_dssp CHHHHHHHHHHHHHTTSEEESSSTTCCSCCSSSCEEEECC
T ss_pred ChHHHHHHHHHHHHCCCEEeCCccccccccCCCeeEEeCC
Confidence 45899999999999999999954 212368999886
No 39
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=22.44 E-value=1.7e+02 Score=19.08 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=31.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEE
Q 033860 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYE 50 (110)
Q Consensus 13 v~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~ 50 (110)
|-+--.+.++.+.+|..|-++==+.+||+++.+--+|+
T Consensus 48 Vkvl~~~~~d~~e~a~~la~~t~a~vVq~IG~~~VLYR 85 (104)
T 1rq8_A 48 VHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYR 85 (104)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHTEEEEEEETTEEEEEE
T ss_pred EEEeCCCHHHHHHHHHHHHHHhCCEEEEEECCEEEEEe
Confidence 34444568889999999999888999999998777787
No 40
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=21.72 E-value=1.5e+02 Score=21.86 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=33.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhccccceEeecCCceEEEE
Q 033860 13 VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYE 50 (110)
Q Consensus 13 v~tT~p~~e~A~~ia~~lve~rLaACvni~~~v~S~Y~ 50 (110)
+++.+++.+....++++|-++.+.+-+.+.|..+|+..
T Consensus 32 llve~~~~~~v~al~~~L~~~~~~gv~e~vP~~~SllV 69 (228)
T 3mml_B 32 LLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLV 69 (228)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCTTEEEEEECSSEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCcEEeeccccEEEE
Confidence 55677888889999999999999999999999999854
No 41
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.70 E-value=78 Score=23.06 Aligned_cols=30 Identities=13% Similarity=0.003 Sum_probs=23.4
Q ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHhcc
Q 033860 5 SKTVPSIVVYVTVPNKEAGKKLAESIVKAK 34 (110)
Q Consensus 5 ~~~~~~~lv~tT~p~~e~A~~ia~~lve~r 34 (110)
|+++.--.+++|-.+.--++.+|+.|++++
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G 55 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRG 55 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCC
Confidence 443334578888888899999999999875
No 42
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=21.31 E-value=89 Score=18.01 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=22.8
Q ss_pred eEEEeeeccchHHHHHHHHHHhCCCccceEEEEeCCCCCHh
Q 033860 59 ELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQP 99 (110)
Q Consensus 59 ~~l~~KT~~~~~~~l~~~I~~~HpYevPeIi~~~i~~~~~~ 99 (110)
..+.+++.....+++.+.|++ .|++...-...|..+
T Consensus 4 a~v~v~~~~~~~~~~~~~l~~-----~peV~~~~~vtG~~d 39 (83)
T 2zbc_A 4 AIVLINTDAGGEDEVFERLKS-----MSEVTEVHVVYGVYD 39 (83)
T ss_dssp EEEEEEESTTCHHHHHHHHTT-----CTTEEEEEECSSSCS
T ss_pred EEEEEEEcCCCHHHHHHHHhC-----CCCeEEEEEEeccCC
Confidence 456777777777777777654 466665555555433
No 43
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=21.30 E-value=30 Score=21.34 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=19.3
Q ss_pred EEEeCCCHHHHHHHHHHHHhccc
Q 033860 13 VYVTVPNKEAGKKLAESIVKAKL 35 (110)
Q Consensus 13 v~tT~p~~e~A~~ia~~lve~rL 35 (110)
|+..+.|.++|+.+-+.|.+++-
T Consensus 37 if~~~~d~~eA~e~~~~lqa~~~ 59 (71)
T 1gh9_A 37 IFGRADDFEEASELVRKLQEEKY 59 (71)
T ss_dssp CBSCCSSHHHHHHHHHHHSSCCC
T ss_pred EEEecCCHHHHHHHHHHHHhhhc
Confidence 45568999999999999988864
No 44
>2ixn_A Serine/threonine-protein phosphatase 2A activator; PP2A phosphatase activator prolyl isomerase PTPA, isomerase; 2.8A {Saccharomyces cerevisiae} SCOP: a.268.1.1
Probab=21.28 E-value=59 Score=25.40 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=26.0
Q ss_pred eeeccchHHHHHHHHHHhCCC-ccceEEEEeCCCCCHhHHHHHHh
Q 033860 63 IKTRQSLLETLTEHVKANHEY-DVPEVIALPITGGSQPYLEWLKS 106 (110)
Q Consensus 63 ~KT~~~~~~~l~~~I~~~HpY-evPeIi~~~i~~~~~~Yl~Wi~~ 106 (110)
++..-+.++.|.+.|.+..|= |- -|-..||++|..|.+.
T Consensus 52 v~~l~~iL~~l~~~ide~PP~~~~-----~~~RFGN~AfR~w~~~ 91 (310)
T 2ixn_A 52 INSMMNLLSQIKDITQKHPVIKDA-----DSSRFGKVEFRDFYDE 91 (310)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCC----------CCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCCCHHHHHHHHH
Confidence 344456778888888888774 32 1448899999999754
No 45
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=21.22 E-value=49 Score=26.14 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHhccccceEe
Q 033860 17 VPNKEAGKKLAESIVKAKLAACVN 40 (110)
Q Consensus 17 ~p~~e~A~~ia~~lve~rLaACvn 40 (110)
+.|+++|..+++.|++.++.-+|.
T Consensus 55 ~~~R~eA~~~g~~Ll~~G~i~hv~ 78 (385)
T 3ml6_A 55 FPERREARKYASGLLKAGLIRHTV 78 (385)
T ss_dssp CSSHHHHHHHHHHHHHHSSEEESS
T ss_pred CCCHHHHHHHHHHHHhCCcEEEcC
Confidence 478999999999999999998885
No 46
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.15 E-value=84 Score=22.21 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=26.1
Q ss_pred CCCCCCCCeEEEEEeCCCHHHHHHHHHHHHhcc
Q 033860 2 EGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAK 34 (110)
Q Consensus 2 ~~~~~~~~~~lv~tT~p~~e~A~~ia~~lve~r 34 (110)
|.+|..+.--.+++|-.+.--.+.+|+.|++++
T Consensus 2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G 34 (287)
T 3pxx_A 2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEG 34 (287)
T ss_dssp TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CCcccccCCCEEEEeCCCChHHHHHHHHHHHCC
Confidence 345655555678889999899999999999885
Done!