BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033867
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXB5|FLP2_ARATH Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana
GN=FLP2 PE=2 SV=1
Length = 112
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/112 (76%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSS--RRKVLVHLPTGEVVSSYSSLEQILTGLGW 58
MSGVWVFN NGVIRL+ENP S+ S RR VLV+LPTGE VSSYSSLEQIL LGW
Sbjct: 1 MSGVWVFN-NGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGW 59
Query: 59 ERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRDM 110
ERY+ GD DL Q+HK SSIDLISLPRDFSKFNSVYMYDIV+KNPN FHVRD
Sbjct: 60 ERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRDF 111
>sp|O24340|FPF1_SINAL Flowering-promoting factor 1 OS=Sinapis alba GN=FPF1 PE=2 SV=1
Length = 110
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 97/110 (88%), Gaps = 3/110 (2%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWER 60
MSGVWVF NGVIRL+ENP +S G ++SRRKV+V+LPTGEV+SSYS+LEQIL LGWER
Sbjct: 1 MSGVWVFK-NGVIRLVENPN-QSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWER 58
Query: 61 YYGG-DPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 109
Y+GG D DL QFHK SSIDLISLP+DF+KF+SVYMYDIV+KNPN FHVRD
Sbjct: 59 YFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRD 108
>sp|O23624|FPF1_ARATH Flowering-promoting factor 1 OS=Arabidopsis thaliana GN=FPF1 PE=2
SV=1
Length = 110
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/110 (77%), Positives = 95/110 (86%), Gaps = 3/110 (2%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWER 60
MSGVWVF NGVIRL+ENP +S + +RRKV+V+LPTGEVVSSYS+LEQIL LGWER
Sbjct: 1 MSGVWVFK-NGVIRLVENPN-QSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWER 58
Query: 61 YYGG-DPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 109
Y+GG D DL QFHK SSIDLISLPRDF+KFNSVYMYDIV+KNPN FHVRD
Sbjct: 59 YFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108
>sp|Q5Q0B3|FLP1_ARATH Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana
GN=FLP1 PE=2 SV=2
Length = 124
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 92/124 (74%), Gaps = 14/124 (11%)
Query: 1 MSGVWVFNTNGVIRLIENPQAES------------QGSSSSRRKVLVHLPTGEVVSSYSS 48
MSGVWVFN NGV+RL+ENP +S RRK+LVHLP+ EVVSSY S
Sbjct: 1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60
Query: 49 LEQILTGLGWERYYGGD--PDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFH 106
LE+IL LGWERYY GD L QFHK +SIDLISLPRDFSKFNS++MYDIV+KNPNVFH
Sbjct: 61 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 120
Query: 107 VRDM 110
VRDM
Sbjct: 121 VRDM 124
>sp|Q9LGE3|FLP1_ORYSJ Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp.
japonica GN=RAA1 PE=1 SV=1
Length = 109
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 84/110 (76%), Gaps = 3/110 (2%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGS-SSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWE 59
MSGVWVF NGV+RL+E QA + + + RRK LVH P+G+VVSSY++LE LT LGWE
Sbjct: 1 MSGVWVFK-NGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWE 59
Query: 60 RYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 109
RYY DP LFQFHK S+DLISLP DFS F+SV+MYDIV+KN + F V D
Sbjct: 60 RYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
>sp|Q0E1D7|FLP3_ORYSJ Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp.
japonica GN=Os02g0460200 PE=2 SV=1
Length = 122
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 7/114 (6%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSS-----RRKVLVHLPTGEVVSSYSSLEQILTG 55
M+GVWVF +G++R +ENP +E S+ RRKVLVH+P+GEVV+SY LE+ L
Sbjct: 1 MAGVWVFK-DGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLRE 59
Query: 56 LGWERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 109
LGWERY DP L QFH+ S++ LIS+PRDFSKF V+MYDIV+K NVF VRD
Sbjct: 60 LGWERYLT-DPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>sp|Q8LR63|FLP2_ORYSJ Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp.
japonica GN=Os01g0933500 PE=2 SV=1
Length = 127
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 19/128 (14%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSS-----------RRKVLVHLPTGEVVSSYSSL 49
MSGVWVF NGV++L+ENP A + RRK L+H+PTGEVV+SY+SL
Sbjct: 1 MSGVWVFR-NGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASL 59
Query: 50 EQILTGLGWERYYGGDPD-------LFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNP 102
E+ L LGWERYY G + QFHK SS+DLISLP+DFS+F SV+MYDIV+KN
Sbjct: 60 ERKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNR 119
Query: 103 NVFHVRDM 110
+ F V D+
Sbjct: 120 DAFRVIDV 127
>sp|Q0JEF5|FLP4_ORYSJ Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp.
japonica GN=Os04g0282400 PE=2 SV=1
Length = 118
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 78/117 (66%), Gaps = 15/117 (12%)
Query: 1 MSGVWVFNTNGVIRLIENPQAESQGSSSSRR--------KVLVHLPTGEVVSSYSSLEQI 52
M+GVWVF +G++R +A+S+ S R KVLVH+P+ EVV+SY LE+
Sbjct: 1 MAGVWVFE-DGMVR-----RADSEAPSRGRGVGGGGGGGKVLVHVPSSEVVTSYEVLERR 54
Query: 53 LTGLGWERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 109
L LGWERY DP L QFH+ S++ LIS+PRDFS+ V+MYD+V+K NVF VRD
Sbjct: 55 LRELGWERYLN-DPCLLQFHQRSTVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110
>sp|A3BNA1|FLP5_ORYSJ Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp.
japonica GN=Os07g0671000 PE=3 SV=1
Length = 105
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 11/109 (10%)
Query: 3 GVWVFNTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWERYY 62
GVWVF NGV+ L E Q +S RK LVH+ T EV+ S +LE+ L LGWERYY
Sbjct: 5 GVWVFRNNGVMEL------EEQATS---RKALVHVATSEVIRSTEALERRLGALGWERYY 55
Query: 63 GGDPDLFQFHKHS-SIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRDM 110
D Q H+ S DLIS+PRDFS+F S +MYD+V+KN + F V D+
Sbjct: 56 E-DRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKVVDL 103
>sp|Q9N2I2|IPSP_BOVIN Plasma serine protease inhibitor OS=Bos taurus GN=SERPINA5 PE=1
SV=1
Length = 404
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 30 RRKVLVHLPTGEVVSSYSSLEQILTGLGWERYYGGDPDLFQFHKHSSI 77
+R++ ++LP + SY LE++L LG + D DL HSSI
Sbjct: 292 KRRLELYLPKFSIEGSYQ-LEEVLPKLGIRDIFTSDADLTGISNHSSI 338
>sp|Q8H2D1|REM8_ARATH B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8
PE=2 SV=1
Length = 462
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 72 HKHSSIDLISLPRDFSKFNSV--YMYDIVIKN 101
H + S DL++LPRDF+K N + M++IV+ N
Sbjct: 155 HSNISNDLVTLPRDFAKRNGLDKGMHEIVLMN 186
>sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1
Length = 808
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 8 NTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWERYYGGDPD 67
N NG ++ N G S RK +L T + YS E +G+ER +G +
Sbjct: 188 NYNGKTLMLNNRVQNVNGLQSMLRKAGDYLSTLPSDTPYSEFEHKFQEIGFERGWGDTAE 247
Query: 68 LFQFHKHSSIDLISLPRDFSKFNSV-----YMYDIVIKNPNVFHVRD 109
H +DL+ P D S + ++++VI +P+ + ++
Sbjct: 248 RVTEMFHMLLDLLEAP-DASTLETFLGKIPMVFNVVILSPHGYFAQE 293
>sp|A5D1B6|RLMN_PELTS Probable dual-specificity RNA methyltransferase RlmN
OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
JCM 10971 / SI) GN=rlmN PE=3 SV=1
Length = 368
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 15 LIENPQAESQGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWERYYGGDPDLFQFHK- 73
++EN + +GS ++ V T + LE++LTG+G ERY G ++ F K
Sbjct: 1 MVENSFCKKEGSPVVGDRINVKDLT------LAGLERLLTGMGAERYRAGQVAIWVFQKG 54
Query: 74 -HSSIDLISLPRDF 86
S ++ +LP +
Sbjct: 55 AESFREMTNLPANL 68
>sp|O64202|VG06_BPMD2 Minor tail protein Gp6 OS=Mycobacterium phage D29 GN=6 PE=3 SV=3
Length = 322
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 4 VWVFNTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVV 43
+W F +GV I+ E+ + R LVHLPTGE
Sbjct: 268 IWPFTIDGVTASIKVESEEADKIPNRCRWQLVHLPTGEAA 307
>sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1
Length = 766
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 24 QGSSSSRRKVLVHLPTGEVVSSYSSLEQILTGLGWERYYGGDPDLFQFHKHSSIDLISLP 83
Q + S L+ LP + YS E ++ G+G+ER +G + H +D++ P
Sbjct: 150 QSALSKAEDYLIKLPAD---TPYSEFEFVIQGMGFERGWGDTAERVLEMMHLLLDILQAP 206
>sp|Q05278|VG06_BPML5 Minor tail protein Gp6 OS=Mycobacterium phage L5 GN=6 PE=1 SV=2
Length = 313
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 4 VWVFNTNGVIRLIENPQAESQGSSSSRRKVLVHLPTGEVV 43
+W F NG I+ E+ + R LVH+PTGE
Sbjct: 259 IWPFTVNGETATIKVESEEADKIPNRCRWQLVHMPTGEAA 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,273,906
Number of Sequences: 539616
Number of extensions: 1704637
Number of successful extensions: 3550
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3519
Number of HSP's gapped (non-prelim): 17
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)