BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033870
MASNRGHGGIQQLLAAEQEAQHIVAAARNAKMARLRQAKEEAEREIAEHRAQVEREFQRK
LAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN

High Scoring Gene Products

Symbol, full name Information P value
VMA10
AT3G01390
protein from Arabidopsis thaliana 4.2e-24
VAG2
vacuolar ATP synthase subunit G2
protein from Arabidopsis thaliana 4.1e-17
VATG3
vacuolar ATP synthase G3
protein from Arabidopsis thaliana 1.2e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033870
        (110 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2096682 - symbol:VMA10 "vacuolar membrane ATPa...   276  4.2e-24   1
TAIR|locus:2128499 - symbol:VAG2 "vacuolar ATP synthase s...   210  4.1e-17   1
TAIR|locus:2120790 - symbol:VATG3 "vacuolar ATP synthase ...   168  1.2e-12   1


>TAIR|locus:2096682 [details] [associations]
            symbol:VMA10 "vacuolar membrane ATPase 10" species:3702
            "Arabidopsis thaliana" [GO:0015992 "proton transport" evidence=IEA]
            [GO:0016471 "vacuolar proton-transporting V-type ATPase complex"
            evidence=IEA] [GO:0016820 "hydrolase activity, acting on acid
            anhydrides, catalyzing transmembrane movement of substances"
            evidence=IEA] [GO:0000325 "plant-type vacuole" evidence=ISS]
            [GO:0015991 "ATP hydrolysis coupled proton transport" evidence=ISS]
            [GO:0016469 "proton-transporting two-sector ATPase complex"
            evidence=ISS] [GO:0046933 "proton-transporting ATP synthase
            activity, rotational mechanism" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0006007 "glucose catabolic process" evidence=RCA]
            InterPro:IPR005124 Pfam:PF03179 GO:GO:0005829 GO:GO:0005886
            GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000325 GO:GO:0015991 GO:GO:0046933 EMBL:AC010870
            GO:GO:0016820 GO:GO:0016471 EMBL:AJ005901 EMBL:AF181688
            EMBL:AY072365 EMBL:AY114730 IPI:IPI00527415 PIR:T51825
            RefSeq:NP_186788.1 RefSeq:NP_850489.1 UniGene:At.22509
            ProteinModelPortal:O82628 SMR:O82628 IntAct:O82628 STRING:O82628
            TCDB:3.A.2.2.5 PaxDb:O82628 PRIDE:O82628 ProMEX:O82628
            EnsemblPlants:AT3G01390.1 EnsemblPlants:AT3G01390.2 GeneID:821130
            KEGG:ath:AT3G01390 TAIR:At3g01390 eggNOG:NOG124956
            HOGENOM:HOG000186416 InParanoid:O82628 KO:K02152 OMA:SQKNGIA
            PhylomeDB:O82628 ProtClustDB:CLSN2722903 Genevestigator:O82628
            GermOnline:AT3G01390 GO:GO:0016469 PANTHER:PTHR12713
            TIGRFAMs:TIGR01147 Uniprot:O82628
        Length = 110

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 61/110 (55%), Positives = 67/110 (60%)

Query:     1 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRK 60
             M SNRG G I           HIV AAR AKMARL                Q E++FQRK
Sbjct:     1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60

Query:    61 LAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 110
             L E+SGDSGANVKRLEQET+ KI  L   A +I  DVV+MLLKHVTTVKN
Sbjct:    61 LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110


>TAIR|locus:2128499 [details] [associations]
            symbol:VAG2 "vacuolar ATP synthase subunit G2"
            species:3702 "Arabidopsis thaliana" [GO:0015992 "proton transport"
            evidence=IEA] [GO:0016471 "vacuolar proton-transporting V-type
            ATPase complex" evidence=IEA] [GO:0016820 "hydrolase activity,
            acting on acid anhydrides, catalyzing transmembrane movement of
            substances" evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] InterPro:IPR005124 Pfam:PF03179
            GO:GO:0005794 GO:GO:0005774 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0015992 EMBL:AL161560 EMBL:AL035394 GO:GO:0016820
            GO:GO:0016471 TCDB:3.A.2.2.5 eggNOG:NOG124956 HOGENOM:HOG000186416
            KO:K02152 ProtClustDB:CLSN2722903 PANTHER:PTHR12713
            TIGRFAMs:TIGR01147 EMBL:AJ005902 EMBL:BT003107 IPI:IPI00516893
            PIR:T05603 PIR:T51826 RefSeq:NP_194102.1 UniGene:At.161
            ProteinModelPortal:O82629 SMR:O82629 STRING:O82629 PaxDb:O82629
            PRIDE:O82629 EnsemblPlants:AT4G23710.1 GeneID:828471
            KEGG:ath:AT4G23710 TAIR:At4g23710 InParanoid:O82629 OMA:EHKTSTE
            PhylomeDB:O82629 Genevestigator:O82629 GermOnline:AT4G23710
            Uniprot:O82629
        Length = 106

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 50/102 (49%), Positives = 55/102 (53%)

Query:     9 GIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDS 68
             GI            IV AAR AKM RL                  E+ FQRKL  +SGDS
Sbjct:     5 GIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDS 64

Query:    69 GANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 110
             GANVKRLEQET+ KI  L   A +I  DVV MLLK+VTTV N
Sbjct:    65 GANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106


>TAIR|locus:2120790 [details] [associations]
            symbol:VATG3 "vacuolar ATP synthase G3" species:3702
            "Arabidopsis thaliana" [GO:0015992 "proton transport" evidence=IEA]
            [GO:0016471 "vacuolar proton-transporting V-type ATPase complex"
            evidence=IEA] [GO:0016820 "hydrolase activity, acting on acid
            anhydrides, catalyzing transmembrane movement of substances"
            evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
            InterPro:IPR005124 Pfam:PF03179 GO:GO:0005773 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161564 EMBL:AL049483 GO:GO:0015992
            GO:GO:0016820 GO:GO:0016471 TCDB:3.A.2.2.5 HOGENOM:HOG000186416
            KO:K02152 ProtClustDB:CLSN2722903 PANTHER:PTHR12713
            TIGRFAMs:TIGR01147 EMBL:AY063859 EMBL:AY091217 IPI:IPI00523472
            PIR:T04250 RefSeq:NP_194325.1 UniGene:At.27175
            ProteinModelPortal:Q9SZH0 SMR:Q9SZH0 STRING:Q9SZH0 PaxDb:Q9SZH0
            PRIDE:Q9SZH0 EnsemblPlants:AT4G25950.1 GeneID:828701
            KEGG:ath:AT4G25950 TAIR:At4g25950 eggNOG:NOG319839
            InParanoid:Q9SZH0 OMA:RGQGGIQ PhylomeDB:Q9SZH0
            Genevestigator:Q9SZH0 GermOnline:AT4G25950 Uniprot:Q9SZH0
        Length = 108

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 39/107 (36%), Positives = 58/107 (54%)

Query:     1 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRK 60
             M S RG GGI            IV+AAR AK+AR+                ++E E+Q +
Sbjct:     1 MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQ 60

Query:    61 LAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTT 107
             +  S  D  A+ KRL+ ET+V+I +L   + K+  D+V+ML+K+VTT
Sbjct:    61 V--SGTDQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.338    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110        83   0.00091  102 3  10 23  0.43    29
                                                     29  0.44    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  484 (52 KB)
  Total size of DFA:  104 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.32u 0.15s 12.47t   Elapsed:  00:00:01
  Total cpu time:  12.32u 0.15s 12.47t   Elapsed:  00:00:01
  Start:  Fri May 10 06:45:26 2013   End:  Fri May 10 06:45:27 2013

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