BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033874
(110 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545196|ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
gi|223547567|gb|EEF49062.1| conserved hypothetical protein [Ricinus communis]
Length = 170
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 85/101 (84%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKMHGRLACGRPLVVRLASEKYLE+AAQNS +AVGE KT GGTSGQM+R+
Sbjct: 69 EEAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRN 128
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLNCLSGK 102
AKIAAIKNKL+ LEEE SS KKQKQ+ + N L+ LSG+
Sbjct: 129 AKIAAIKNKLRTLEEEGSSVKKQKQSGSILGNSRLDRLSGE 169
>gi|224077392|ref|XP_002305243.1| predicted protein [Populus trichocarpa]
gi|222848207|gb|EEE85754.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 81/96 (84%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EAKLAKEKMHGRLACGRPLVVRLASEKY+++AAQ+SS A+GEA K G G T GQ +RS
Sbjct: 37 EEAKLAKEKMHGRLACGRPLVVRLASEKYVDEAAQDSSTALGEAKKAGLTGSTLGQTSRS 96
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLN 97
AKIAAIKNKL+ALEE S KKQKQAD+ SC SL+
Sbjct: 97 AKIAAIKNKLRALEEGGPSVKKQKQADSDSCKDSLD 132
>gi|356561522|ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 212
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFV--GGTSGQMN 59
+EA+LAKEKMHGRLACGRPL VRLA EK++ + A NS+KA GE +K GG GQ +
Sbjct: 121 EEAELAKEKMHGRLACGRPLFVRLAGEKFMLETADNSTKAAGEGHKMHLTGGGGAMGQTS 180
Query: 60 RSAKIAAIKNKLKALEEESSSAKKQKQADNSS 91
R AKIAAIKNKLK+LEEESS +KKQK++DN S
Sbjct: 181 RHAKIAAIKNKLKSLEEESSRSKKQKRSDNIS 212
>gi|359490617|ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
Length = 218
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 75/96 (78%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKMHG+L CGRPL VRLA+EK L + A+ + + VG +NK+ G +SGQM+RS
Sbjct: 116 EEAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRS 175
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLN 97
AKIAAIKNKLK +EEES+ K+QK AD SC+ L+
Sbjct: 176 AKIAAIKNKLKEMEEESNGTKRQKVADKVSCSNGLD 211
>gi|147815698|emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]
Length = 216
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 3 EAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSA 62
EA+LAKEKMHG+L CGRPL VRLA+EK L + A+ + + VG +NK+ G +SGQM+RSA
Sbjct: 115 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 174
Query: 63 KIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLN 97
KIAAIKNKLK +EEES+ K+QK AD SC+ L+
Sbjct: 175 KIAAIKNKLKEMEEESNGTKRQKVADKVSCSNGLD 209
>gi|302143805|emb|CBI22666.3| unnamed protein product [Vitis vinifera]
Length = 188
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 75/96 (78%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKMHG+L CGRPL VRLA+EK L + A+ + + VG +NK+ G +SGQM+RS
Sbjct: 86 EEAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRS 145
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSSCNGSLN 97
AKIAAIKNKLK +EEES+ K+QK AD SC+ L+
Sbjct: 146 AKIAAIKNKLKEMEEESNGTKRQKVADKVSCSNGLD 181
>gi|356519834|ref|XP_003528574.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
18-like [Glycine max]
Length = 190
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MQEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTS-GQMN 59
MQEA+LAKEKMHGRLACGRPLVVRLA +K + + S+KA GE +K GG + GQ +
Sbjct: 99 MQEAELAKEKMHGRLACGRPLVVRLAGDKCMLETTDRSTKAAGEGHKMHLTGGGAMGQTS 158
Query: 60 RSAKIAAIKNKLKALEEESSSAKKQKQADNSS 91
RSAKI A KNKLK+LEEESS KKQKQ+D +S
Sbjct: 159 RSAKIVATKNKLKSLEEESSRTKKQKQSDYTS 190
>gi|357438285|ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
gi|357473041|ref|XP_003606805.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478466|gb|AES59669.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355507860|gb|AES89002.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 157
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA LAKEKMHGRLAC RPLVVRLA E+Y + A +S+KAV E +K GG GQ +RS
Sbjct: 68 EEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSS 91
AKIAAIKNKLK+LEE++S KKQK +DN S
Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157
>gi|388504432|gb|AFK40282.1| unknown [Medicago truncatula]
Length = 157
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA LAKEKMHGRLAC RPLV+RLA E+Y + A +S+KAV E +K GG GQ +RS
Sbjct: 68 EEAILAKEKMHGRLACSRPLVIRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSS 91
AKIAAIKNKLK+LEE++S KKQK +DN S
Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157
>gi|358344347|ref|XP_003636251.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355502186|gb|AES83389.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 157
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA LA+EKMHGRLAC RPLVVRLA E+Y + A +S+KAV E +K GG GQ +RS
Sbjct: 68 EEAILAREKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 62 AKIAAIKNKLKALEEESSSAKKQKQADNSS 91
AKIAAIKNKLK+LEE++S KKQK +DN S
Sbjct: 128 AKIAAIKNKLKSLEEDNSKTKKQKLSDNIS 157
>gi|356529159|ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 157
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFV--GGTSGQMN 59
+EA+LAKEKMHGRLAC RPLVVRLA +K + + +S+KA GE +K GG GQ +
Sbjct: 66 EEAELAKEKMHGRLACSRPLVVRLAGDKCMLETVDSSTKAAGEGHKMHLTGGGGAMGQTS 125
Query: 60 RSAKIAAIKNKLKALEEESSSAKKQKQADNSS 91
RSAKIAAIKNKLK+LEEESS KKQKQ+DN S
Sbjct: 126 RSAKIAAIKNKLKSLEEESSRTKKQKQSDNIS 157
>gi|297796067|ref|XP_002865918.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311753|gb|EFH42177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 132
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 3/88 (3%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFV-GGTSGQMN 59
QEA+LAKEKMHGRLACGRPLVVRLASEK LED + + SK ++ EAN+ FV G +SGQM+
Sbjct: 45 QEAELAKEKMHGRLACGRPLVVRLASEKQLEDISHDHSKRSLPEANRPRFVNGSSSGQMS 104
Query: 60 RSAKIAAIKNKLKALEE-ESSSAKKQKQ 86
R K+AAIKNKLKALEE E KKQK+
Sbjct: 105 RDEKVAAIKNKLKALEEDEKRDPKKQKR 132
>gi|307135920|gb|ADN33783.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 105
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
Query: 1 MQEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNR 60
MQEAKLAKEKMHG+LACGRPLVVRLASEK + + A ++SKA E+ K+ G + GQ+ R
Sbjct: 1 MQEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSYGQLTR 60
Query: 61 SAKIAAIKNKLKALE--EESSSAKKQKQADNSSCNGSLN 97
S KIAAIKNKL+ALE ESSS KK KQ DN S ++
Sbjct: 61 SDKIAAIKNKLRALEGGGESSSVKKPKQ-DNISFKDHID 98
>gi|255637519|gb|ACU19086.1| unknown [Glycine max]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MQEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTS-GQMN 59
MQEA+LAKEKMHGRLAC RPLVV LA +K + + + +KA GE +K GG + GQ +
Sbjct: 1 MQEAELAKEKMHGRLACSRPLVVCLAGDKCMLETVDSFTKAAGEGHKMHLTGGGAMGQTS 60
Query: 60 RSAKIAAIKNKLKALEEESSSAKKQKQADNSS 91
RSAKIAAIKNKLK+LEEES KKQKQ+DN S
Sbjct: 61 RSAKIAAIKNKLKSLEEESFRTKKQKQSDNIS 92
>gi|449456323|ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
gi|449497265|ref|XP_004160356.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
Length = 171
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EAKLAKEKMHG+LACGRPLVVRLASEK + + ++S+ E+ K+ G + GQ+ RS
Sbjct: 68 EEAKLAKEKMHGKLACGRPLVVRLASEKLMTNTTNDTSRTASESRKSRLGGSSYGQLTRS 127
Query: 62 AKIAAIKNKLKALE--EESSSAKKQKQADNSS 91
KIAAIKNKL+ALE ESSS KK KQ DN S
Sbjct: 128 DKIAAIKNKLRALEGGGESSSVKKPKQ-DNIS 158
>gi|240256440|ref|NP_680425.4| uncharacterized protein [Arabidopsis thaliana]
gi|332008846|gb|AED96229.1| uncharacterized protein [Arabidopsis thaliana]
Length = 79
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 11 MHGRLACGRPLVVRLASEKYLEDAAQNSSK-AVGEANKTGFV-GGTSGQMNRSAKIAAIK 68
MHGRLACGRPLVVRLASEK+LED++ + SK ++ E N+T FV G +SGQM+R K+ AIK
Sbjct: 1 MHGRLACGRPLVVRLASEKHLEDSSHDHSKRSLPEGNRTRFVNGSSSGQMSRDEKVTAIK 60
Query: 69 NKLKALEE-ESSSAKKQK 85
NKLKALEE E KKQK
Sbjct: 61 NKLKALEEDEKRDPKKQK 78
>gi|215687242|dbj|BAG91807.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 101
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MQEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNR 60
MQEA+LAKEKM+GRL CGRP+VV LASEK D+ NS +A+ + G G S Q +R
Sbjct: 1 MQEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDR 59
Query: 61 SAKIAAIKNKLKALEEESSSAKKQK 85
+AKIAAIK+KLK+LE+E S K+ +
Sbjct: 60 AAKIAAIKHKLKSLEDEGCSTKRPR 84
>gi|218184933|gb|EEC67360.1| hypothetical protein OsI_34460 [Oryza sativa Indica Group]
Length = 167
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKM+GRL CGRP+VV LASEK D+ NS +A+ + G G S Q +R+
Sbjct: 68 EEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDRA 126
Query: 62 AKIAAIKNKLKALEEESSSAKKQK 85
AKIAAIK+KLK+LE+E S K+ +
Sbjct: 127 AKIAAIKHKLKSLEDEGCSTKRPR 150
>gi|222613180|gb|EEE51312.1| hypothetical protein OsJ_32272 [Oryza sativa Japonica Group]
Length = 167
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKM+GRL CGRP+VV LASEK D+ NS +A+ + G G S Q +R+
Sbjct: 68 EEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSG-NSHRAMKDKKLAGGSGSKSVQTDRA 126
Query: 62 AKIAAIKNKLKALEEESSSAKKQK 85
AKIAAIK+KLK+LE+E S K+ +
Sbjct: 127 AKIAAIKHKLKSLEDEGCSTKRPR 150
>gi|326515262|dbj|BAK03544.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520728|dbj|BAJ92727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKM+G+L CGRP+VV LASEK D+ NS +A+ + G G S Q +R+
Sbjct: 70 EEAQLAKEKMNGKLVCGRPVVVHLASEKGSLDSG-NSQRALKDKKLAGGSGSKSAQTDRA 128
Query: 62 AKIAAIKNKLKALEEESSSAKKQK 85
AKI+AIKNKL++LE E SAK+ +
Sbjct: 129 AKISAIKNKLRSLENEGCSAKRPR 152
>gi|226531406|ref|NP_001151901.1| ATP binding protein [Zea mays]
gi|195650797|gb|ACG44866.1| ATP binding protein [Zea mays]
gi|223948927|gb|ACN28547.1| unknown [Zea mays]
gi|414867508|tpg|DAA46065.1| TPA: ATP binding protein [Zea mays]
Length = 167
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+LAKEKM+G+L CGRP+VV LASE+ + +S +AV + G G S + +
Sbjct: 68 EEAQLAKEKMNGKLICGRPMVVHLASER-SSLGSSSSHRAVKDKKLAGGSGAKSQYTDTA 126
Query: 62 AKIAAIKNKLKALEEESSSAKKQK 85
AKIAAIKNKLK+LE+ S KK +
Sbjct: 127 AKIAAIKNKLKSLEDGGCSTKKPR 150
>gi|414867507|tpg|DAA46064.1| TPA: hypothetical protein ZEAMMB73_056022 [Zea mays]
Length = 91
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 11 MHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNK 70
M+G+L CGRP+VV LASE+ + +S +AV + G G S + +AKIAAIKNK
Sbjct: 1 MNGKLICGRPMVVHLASERS-SLGSSSSHRAVKDKKLAGGSGAKSQYTDTAAKIAAIKNK 59
Query: 71 LKALEEESSSAKKQK 85
LK+LE+ S KK +
Sbjct: 60 LKSLEDGGCSTKKPR 74
>gi|116780582|gb|ABK21729.1| unknown [Picea sitchensis]
Length = 188
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 15/78 (19%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
+EA+ AKE M+GR A GRPLVVR E ++ +S +++S
Sbjct: 80 EEAEKAKESMNGRFALGRPLVVRFVDEN---------------SDNPNISCMSSCTVSKS 124
Query: 62 AKIAAIKNKLKALEEESS 79
+KIAAI+NKLK++E+ +S
Sbjct: 125 SKIAAIQNKLKSMEQTTS 142
>gi|440797137|gb|ELR18232.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 167
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEK--YLEDAAQNSSKAVGEANKT----GFVGGTS 55
QEA+ AKE+ +GR+ GRPLVVR EK Y D + S AV EA K
Sbjct: 59 QEAQTAKERANGRMFLGRPLVVRFVDEKVLYSNDRLSDDS-AVVEAEKARKQENERDKEH 117
Query: 56 GQMNRSAKIAAIKNKLKALEEESSSA 81
+++ AKI AI+ KL +++E+ A
Sbjct: 118 KRISNEAKIKAIQAKLALMKKETPPA 143
>gi|398310793|ref|ZP_10514267.1| protein YmcA [Bacillus mojavensis RO-H-1]
Length = 143
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 25 LASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAK 82
L S+K + A+N +K + E + F Q+N +AK++ I N++KAL++++ + K
Sbjct: 3 LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENAKVSVIINQIKALQKQAVNLK 60
>gi|389573168|ref|ZP_10163243.1| ymcA [Bacillus sp. M 2-6]
gi|388426865|gb|EIL84675.1| ymcA [Bacillus sp. M 2-6]
Length = 144
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 25 LASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAK 82
L S+K + + A+ +K + E + F Q+N + KIAAI N++KAL++++ + K
Sbjct: 3 LYSKKEIVERARELAKMISETEEVDFFKKAEAQINENTKIAAIINQIKALQKQAVNLK 60
>gi|386758425|ref|YP_006231641.1| master regulator for biofilm formation [Bacillus sp. JS]
gi|384931707|gb|AFI28385.1| master regulator for biofilm formation [Bacillus sp. JS]
Length = 143
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 25 LASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAK 82
L S+K + A+N +K + E + F Q+N + K++AI N++KAL++++ + K
Sbjct: 3 LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSAIVNQIKALQKQAVNLK 60
>gi|443632629|ref|ZP_21116808.1| master regulator for biofilm formation [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347452|gb|ELS61510.1| master regulator for biofilm formation [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 143
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 25 LASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAK 82
L S+K + A+N +K + E + F Q+N + K++AI N++KAL++++ + K
Sbjct: 3 LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSAIINQIKALQKQAVNLK 60
>gi|312385311|gb|EFR29841.1| hypothetical protein AND_00921 [Anopheles darlingi]
Length = 161
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 2 QEAKLAKEKMHGRLACGRPLVVRLASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRS 61
Q+++ A +++ G++ + +VVR A +DA +N K G GG +G +++
Sbjct: 25 QDSQSALKRLDGKVVGEKTIVVRWAKHVNRDDADRNKPKIEIPCLAGGSKGGPNGPVSQQ 84
Query: 62 AKIAAIKNKLKALEEES 78
KI A++ +LK LE S
Sbjct: 85 TKIQALEARLKMLESRS 101
>gi|308173665|ref|YP_003920370.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens DSM 7]
gi|384159315|ref|YP_005541388.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens TA208]
gi|384164250|ref|YP_005545629.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens LL3]
gi|384168362|ref|YP_005549740.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens XH7]
gi|307606529|emb|CBI42900.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens DSM 7]
gi|328553403|gb|AEB23895.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens TA208]
gi|328911805|gb|AEB63401.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens LL3]
gi|341827641|gb|AEK88892.1| master regulator for biofilm formation [Bacillus
amyloliquefaciens XH7]
Length = 143
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 25 LASEKYLEDAAQNSSKAVGEANKTGFVGGTSGQMNRSAKIAAIKNKLKALEEESSSAK 82
L S+K + A+N +K + E + F Q+N + K++ I N++KAL++++ + K
Sbjct: 3 LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENEKVSVIINQIKALQKQAVNLK 60
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.121 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,464,078,653
Number of Sequences: 23463169
Number of extensions: 45410441
Number of successful extensions: 139867
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 139789
Number of HSP's gapped (non-prelim): 103
length of query: 110
length of database: 8,064,228,071
effective HSP length: 78
effective length of query: 32
effective length of database: 6,234,100,889
effective search space: 199491228448
effective search space used: 199491228448
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 69 (31.2 bits)