Citrus Sinensis ID: 033880

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHcccccccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHcccHcccccHHHHHcccHHHcccccccccHHHHHHHc
Coil and Loop (DISEMBL)
mapeviknssgcnlAVDIWSLGCTvlemattkppwsqyeGVAAMFKignskelptipddlsdEGKDFIRLClqrnplnrptavklldhpfvkgaaplertilapelsrl
Flexible Loop (DISEMBL)
mapeviknssgcnLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNrptavklldhpfvkgaaplertilapelsrl
Low Complexity Region (SEG)
MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL
Disordered region (IsUnstruct)
**********GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI******EGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE***********
Disordered Region (DISOPRED)
MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF*******************
Disordered Region (DISEMBL)
********SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL
Disordered Region (DISPRO)
*APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
Q9FZ36	651	Mitogen-activated protein	no	no	0.844	0.141	0.553	2e-23
O22042	651	Mitogen-activated protein	no	no	0.844	0.141	0.563	4e-23
O22040	666	Mitogen-activated protein	no	no	0.844	0.138	0.585	5e-23
Q54R82	942	Mitogen-activated protein	no	no	0.944	0.109	0.472	1e-22
Q01389	1478	Serine/threonine-protein	yes	no	0.825	0.060	0.542	2e-22
Q56UN5	1328	Mitogen-activated protein	no	no	0.834	0.068	0.516	1e-20
Q39008	608	Mitogen-activated protein	no	no	0.871	0.156	0.540	2e-20
E9Q3S4	1311	Mitogen-activated protein	yes	no	0.834	0.069	0.526	5e-20
Q9SZ67	1895	Probable WRKY transcripti	no	no	0.825	0.047	0.553	5e-20
Q9Y6R4	1608	Mitogen-activated protein	no	no	0.834	0.056	0.526	2e-19

>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 2/94 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDD 59
           MAPEVI  + G + + DIWS+GCTV+EM T K PWSQ Y+ +AA+F IG +K  P IPD+
Sbjct: 240 MAPEVILQT-GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDN 298

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           +S +  DF+  CLQ+ P  RPTA +LL HPFV G
Sbjct: 299 ISSDANDFLLKCLQQEPNLRPTASELLKHPFVTG 332

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 2/94 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWS-QYEGVAAMFKIGNSKELPTIPDD 59
           MAPEVI  + G + + DIWS+GCTV+EMAT KPPWS QY+  AA+  IG +K  P IP+D
Sbjct: 240 MAPEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPED 298

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           LS E KDF+  CL + P  R +A +LL HPFV G
Sbjct: 299 LSPEAKDFLMKCLHKEPSLRLSATELLQHPFVTG 332

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22040|ANP1_ARATH Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 66/94 (70%), Gaps = 2/94 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDD 59
           MAPEVI  + G + + DIWS+GCTV+EM T K PWSQ Y+ VAA+F IG +K  P IPD 
Sbjct: 241 MAPEVILQT-GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDT 299

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           LS + KDF+  CLQ  P  RPTA +LL HPFV G
Sbjct: 300 LSSDAKDFLLKCLQEVPNLRPTASELLKHPFVMG 333

May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2

 Score =  104 bits (260), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 5/108 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDD 59
           MAPEVIK + G   + DIWSLGC ++EMAT +PPWS    +AA M+ I +S  +P IP  
Sbjct: 339 MAPEVIKQT-GHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIASSNSIPNIPSH 397

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           +S E  DF+ LC +R+P  RP A +LL HPF+     L+  I  P +S
Sbjct: 398 MSQEAFDFLNLCFKRDPKERPDANQLLKHPFIMN---LDDNIQLPTIS 442

Regulates cell-type differentiation and spatial patterning, required for the proper induction and maintenance of prespore cell differentiation.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCK1 PE=1 SV=1

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 1    MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
            MAPE++    G +  VDIWSLGC VLEM   K PWS  E VAAMFKIG SK  P IP+D 
Sbjct: 1346 MAPEMVDTKQGYSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPEDT 1405

Query: 60   ---LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
               +S  G++F+  C + NP  RPTA +LL HPF
Sbjct: 1406 LPLISQIGRNFLDACFEINPEKRPTANELLSHPF 1439

Serine/threonine protein kinase involved in a signal transduction pathway that play a role in yeast cell morphogenesis and cell growth. This pathway seems to starts by SMP3; then involve the kinase PKC1 that may act on this kinase. BCK1 probably phosphorylates MKK1 and MKK2 which themselves phosphorylate the MPK1 kinase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q56UN5|M3K19_HUMAN Mitogen-activated protein kinase kinase kinase 19 OS=Homo sapiens GN=MAP3K19 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 2/93 (2%)

Query: 1    MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDD 59
            MAPEVI N SG     DIWS+GCTV EMAT KPP +  + +AAMF IG  + L P +PD 
Sbjct: 1234 MAPEVI-NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPDH 1292

Query: 60   LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             S+   DF+R+CL R+   RP+A++LL H F++
Sbjct: 1293 FSENAADFVRMCLTRDQHERPSALQLLKHSFLE 1325

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 3/98 (3%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEVI  K+S G     DIWSLGCTVLEM T + P+S  E V A+F+IG    LP +PD
Sbjct: 496 MAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGT-LPEVPD 554

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
            LS + + FI  CL+ NP  RPTA +LL+HPFV+   P
Sbjct: 555 TLSLDARLFILKCLKVNPEERPTAAELLNHPFVRRPLP 592

Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MEK1/MKK2 and MPK4/MPK6). Activates downstream MKK2, MKK4 and MKK5.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|E9Q3S4|M3K19_MOUSE Mitogen-activated protein kinase kinase kinase 19 OS=Mus musculus GN=Map3k19 PE=3 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 2/93 (2%)

Query: 1    MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDD 59
            MAPEVI N SG     DIWS+GCTV EMAT KPP +  + +AAMF IG  + L P +P  
Sbjct: 1217 MAPEVI-NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPAR 1275

Query: 60   LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             S+   DF+RLCL R+   RP+A++LL H F+K
Sbjct: 1276 FSEPAADFVRLCLTRDQHERPSALQLLKHSFLK 1308

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 4/94 (4%)

Query: 1    MAPEVI---KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
            MAPEVI   K+  G     DIWSLGCTVLEM T + P+S  E   A++ IG  K LP IP
Sbjct: 1785 MAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGTGK-LPKIP 1843

Query: 58   DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            D LS + +DFI  CL+ NP  RPTA +LL+HPFV
Sbjct: 1844 DILSLDARDFILTCLKVNPEERPTAAELLNHPFV 1877

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. May act also as a disease resistance protein with a serine/threonine-protein kinase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 4/95 (4%)

Query: 1    MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIP 57
            MAPEVI  +   G   A DIWSLGC V+EM T K PW +YE     M+K+G   + P IP
Sbjct: 1509 MAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHK-PPIP 1567

Query: 58   DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            + LS EGKDF+  CL+ +P  R TA +LLDH FVK
Sbjct: 1568 ERLSPEGKDFLSHCLESDPKMRWTASQLLDHSFVK 1602

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
356559774	898	PREDICTED: uncharacterized protein LOC10	0.963	0.116	0.885	2e-49
356530846	897	PREDICTED: uncharacterized protein LOC10	0.963	0.117	0.885	6e-49
356535853	887	PREDICTED: uncharacterized protein LOC10	0.972	0.119	0.858	2e-48
356575986	888	PREDICTED: uncharacterized protein LOC10	0.963	0.118	0.866	4e-48
357443889	899	Serine/threonine protein kinase [Medicag	0.981	0.119	0.841	6e-48
359474195	901	PREDICTED: uncharacterized protein LOC10	0.972	0.117	0.849	8e-48
449446021	896	PREDICTED: uncharacterized protein LOC10	0.981	0.119	0.831	2e-47
255545234	911	ATP binding protein, putative [Ricinus c	0.926	0.110	0.871	2e-47
147792548	919	hypothetical protein VITISV_040851 [Viti	0.981	0.116	0.819	2e-47
359490486	892	PREDICTED: uncharacterized protein LOC10	0.981	0.119	0.850	3e-47

>gi|356559774|ref|XP_003548172.1| PREDICTED: uncharacterized protein LOC100792783 [Glycine max]

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/105 (88%), Positives = 97/105 (92%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD L
Sbjct: 576 MAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHL 635

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           S EGKDF+R CLQRNP NRP+A +LLDHPFVK AAPLER IL PE
Sbjct: 636 SSEGKDFVRKCLQRNPHNRPSASELLDHPFVKCAAPLERPILGPE 680

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530846|ref|XP_003533990.1| PREDICTED: uncharacterized protein LOC100819762 [Glycine max]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 93/105 (88%), Positives = 97/105 (92%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD L
Sbjct: 576 MAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHL 635

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           S EGKDF+R CLQRNP NRP+A +LLDHPFVK AAPLER IL PE
Sbjct: 636 SCEGKDFVRKCLQRNPHNRPSASELLDHPFVKYAAPLERPILGPE 680

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535853|ref|XP_003536457.1| PREDICTED: uncharacterized protein LOC100782929 [Glycine max]

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/106 (85%), Positives = 98/106 (92%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVDIWSLGCTVLEMATTKPPW QYE VAAMFKIGNSKELPTIPD L
Sbjct: 566 MAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEAVAAMFKIGNSKELPTIPDHL 625

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
           S+EGKDF+R CLQRNP +RP+A +LLDHPFVK AAPLER ILAPE+
Sbjct: 626 SNEGKDFVRKCLQRNPYDRPSACELLDHPFVKNAAPLERPILAPEV 671

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575986|ref|XP_003556116.1| PREDICTED: uncharacterized protein LOC100797994 [Glycine max]

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 91/105 (86%), Positives = 97/105 (92%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVDIWSLGCTVLEMATTKPPW QYEGVAAMFKIGNSKELPTIPD L
Sbjct: 566 MAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHL 625

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           S+EGKDF+R CLQRNP +RP+A +LLDHPFVK AAPLER I APE
Sbjct: 626 SNEGKDFVRKCLQRNPHDRPSASELLDHPFVKNAAPLERPIPAPE 670

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443889|ref|XP_003592222.1| Serine/threonine protein kinase [Medicago truncatula] gi|355481270|gb|AES62473.1| Serine/threonine protein kinase [Medicago truncatula]

 Score =  194 bits (493), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 90/107 (84%), Positives = 97/107 (90%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS  C+L VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD L
Sbjct: 577 MAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHL 636

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           S+EGKDF+R CLQRNP +RP+A +LLDHPFVKGAAPLER I+ PE S
Sbjct: 637 SNEGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPEAS 683

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474195|ref|XP_003631415.1| PREDICTED: uncharacterized protein LOC100263296 [Vitis vinifera] gi|297742508|emb|CBI34657.3| unnamed protein product [Vitis vinifera]

 Score =  193 bits (491), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 90/106 (84%), Positives = 98/106 (92%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVD+WSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD L
Sbjct: 579 MAPEVIKNSNGCNLAVDLWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHL 638

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
           S+EGKDF+R CLQRNPL+RPTA  LL+HPFV+ AAPLER  L+ EL
Sbjct: 639 SEEGKDFVRQCLQRNPLHRPTAAWLLEHPFVRNAAPLERPSLSSEL 684

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446021|ref|XP_004140770.1| PREDICTED: uncharacterized protein LOC101214961 [Cucumis sativus] gi|449526154|ref|XP_004170079.1| PREDICTED: uncharacterized LOC101214961 [Cucumis sativus]

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/107 (83%), Positives = 98/107 (91%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVD+WSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP IP+ L
Sbjct: 575 MAPEVIKNSNGCNLAVDVWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHL 634

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           SD+GKDF+RLCLQRNP +RPTA +LL+HPFVK AAP+ER IL  E S
Sbjct: 635 SDDGKDFVRLCLQRNPHHRPTAAQLLEHPFVKHAAPVERPILISEPS 681

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545234|ref|XP_002513678.1| ATP binding protein, putative [Ricinus communis] gi|223547586|gb|EEF49081.1| ATP binding protein, putative [Ricinus communis]

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/101 (87%), Positives = 95/101 (94%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIKNS+GCNLAVDIWSLGCTVLEMATTKPPWSQ+EGVAAMFKIGNSK+LP IPD L
Sbjct: 594 MAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAMFKIGNSKDLPAIPDHL 653

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           SDEGKDF+R CLQRNPL+RPTA +LL+HPFVK AAPLER I
Sbjct: 654 SDEGKDFVRQCLQRNPLHRPTAAQLLEHPFVKSAAPLERPI 694

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792548|emb|CAN65619.1| hypothetical protein VITISV_040851 [Vitis vinifera]

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/111 (81%), Positives = 100/111 (90%), Gaps = 4/111 (3%)

Query: 1   MAPE----VIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPE    VI+NS+GCNLAVDIWSLGCTVLEMATTKPPWSQ+EGVAAMFKIGNSK+LP I
Sbjct: 576 MAPELFAQVIRNSNGCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAMFKIGNSKDLPAI 635

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           PD LSDEGKDF+R CLQRNPL+RPTA +LL+HPFVK AAPLER IL+PE S
Sbjct: 636 PDHLSDEGKDFVRQCLQRNPLHRPTAAQLLEHPFVKNAAPLERPILSPETS 686

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490486|ref|XP_003634098.1| PREDICTED: uncharacterized protein LOC100242348 [Vitis vinifera] gi|302143826|emb|CBI22687.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 91/107 (85%), Positives = 100/107 (93%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+NS+GCNLAVDIWSLGCTVLEMATTKPPWSQ+EGVAAMFKIGNSK+LP IPD L
Sbjct: 576 MAPEVIRNSNGCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAMFKIGNSKDLPAIPDHL 635

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           SDEGKDF+R CLQRNPL+RPTA +LL+HPFVK AAPLER IL+PE S
Sbjct: 636 SDEGKDFVRQCLQRNPLHRPTAAQLLEHPFVKNAAPLERPILSPETS 682

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
TAIR|locus:2026674	883	YDA "YODA" [Arabidopsis thalia	0.963	0.118	0.8	9.7e-42
TAIR|locus:2024832	609	MAP3KA "mitogen-activated prot	0.935	0.167	0.656	5.3e-33
TAIR|locus:2174969	716	MAPKKK5 "mitogen-activated pro	0.844	0.128	0.57	2.2e-24
TAIR|locus:2035989	666	NP1 "NPK1-related protein kina	0.844	0.138	0.585	4.4e-22
TAIR|locus:2080394	651	NP3 "NPK1-related protein kina	0.844	0.141	0.563	5.3e-22
UNIPROTKB|Q40541	690	Q40541 "Protein kinase" [Nicot	0.825	0.130	0.576	6.1e-22
SGD|S000003631	1478	BCK1 "MAPKKK acting in the pro	0.825	0.060	0.542	3.9e-20
TAIR|locus:2133559	608	MEKK1 "MAPK/ERK kinase kinase	0.871	0.156	0.540	5.2e-20
DICTYBASE|DDB_G0283265	1267	mkkA "octicosapeptide/Phox/Bem	0.944	0.081	0.472	1.1e-19
UNIPROTKB|F1N4V8	460	YSK4 "Uncharacterized protein"	0.834	0.197	0.537	1.8e-19

TAIR|locus:2026674 YDA "YODA" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 9.7e-42, P = 9.7e-42
 Identities = 84/105 (80%), Positives = 92/105 (87%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
             MAPEVIKNS+G NLAVDIWSLGCTVLEMATTKPPWSQYEGV AMFKIGNSKELP IPD L
Sbjct:   566 MAPEVIKNSNGSNLAVDIWSLGCTVLEMATTKPPWSQYEGVPAMFKIGNSKELPDIPDHL 625

Query:    61 SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
             S+EGKDF+R CLQRNP NRPTA +LLDH FV+   P+ER I++ E
Sbjct:   626 SEEGKDFVRKCLQRNPANRPTAAQLLDHAFVRNVMPMERPIVSGE 670

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010229 "inflorescence development" evidence=IMP

TAIR|locus:2024832 MAP3KA "mitogen-activated protein kinase kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 5.3e-33, P = 5.3e-33
 Identities = 67/102 (65%), Positives = 83/102 (81%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
             MAPEV+ + +G   AVDIWSLGCT+LEMAT+KPPWSQ+EGVAA+FKIGNSK+ P IPD L
Sbjct:   380 MAPEVVMSQNGYTHAVDIWSLGCTILEMATSKPPWSQFEGVAAIFKIGNSKDTPEIPDHL 439

Query:    61 SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
             S++ K+FIRLCLQRNP  RPTA +LL+HPF++    +  T L
Sbjct:   440 SNDAKNFIRLCLQRNPTVRPTASQLLEHPFLRNTTRVASTSL 481

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2174969 MAPKKK5 "mitogen-activated protein kinase kinase kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.2e-24, P = 2.2e-24
 Identities = 57/100 (57%), Positives = 73/100 (73%)

Query:     1 MAPE----VIKNSSGCNLA--VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP 54
             MAPE    V++  S  +LA  VDIWSLGCT++EM T KPPWS++EG AAMFK+   ++ P
Sbjct:   513 MAPELMQAVMQKDSNPDLAFAVDIWSLGCTIIEMFTGKPPWSEFEGAAAMFKV--MRDSP 570

Query:    55 TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 94
              IP+ +S EGKDF+RLC QRNP  RPTA  LL+H F+K +
Sbjct:   571 PIPESMSPEGKDFLRLCFQRNPAERPTASMLLEHRFLKNS 610

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2035989 NP1 "NPK1-related protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.4e-22, P = 4.4e-22
 Identities = 55/94 (58%), Positives = 66/94 (70%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDD 59
             MAPEVI  + G + + DIWS+GCTV+EM T K PWSQ Y+ VAA+F IG +K  P IPD 
Sbjct:   241 MAPEVILQT-GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDT 299

Query:    60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
             LS + KDF+  CLQ  P  RPTA +LL HPFV G
Sbjct:   300 LSSDAKDFLLKCLQEVPNLRPTASELLKHPFVMG 333

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0009908 "flower development" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

TAIR|locus:2080394 NP3 "NPK1-related protein kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 5.3e-22, P = 5.3e-22
 Identities = 53/94 (56%), Positives = 66/94 (70%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWS-QYEGVAAMFKIGNSKELPTIPDD 59
             MAPEVI  + G + + DIWS+GCTV+EMAT KPPWS QY+  AA+  IG +K  P IP+D
Sbjct:   240 MAPEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPED 298

Query:    60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
             LS E KDF+  CL + P  R +A +LL HPFV G
Sbjct:   299 LSPEAKDFLMKCLHKEPSLRLSATELLQHPFVTG 332

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0048046 "apoplast" evidence=IDA

GO:0043622 "cortical microtubule organization" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006260 "DNA replication" evidence=RCA

GO:0006270 "DNA replication initiation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006306 "DNA methylation" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

GO:0051726 "regulation of cell cycle" evidence=RCA

UNIPROTKB|Q40541 Q40541 "Protein kinase" [Nicotiana tabacum (taxid:4097)]

 Score = 265 (98.3 bits), Expect = 6.1e-22, P = 6.1e-22
 Identities = 53/92 (57%), Positives = 66/92 (71%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDD 59
             MAPEVI  + G + + DIWS+GCT++EMAT KPPWSQ Y+ VAA+F IG +K  P IP+ 
Sbjct:   252 MAPEVILQT-GHSFSADIWSVGCTIIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEH 310

Query:    60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             LS E KDF+  CLQ+ P  R +A  LL HPFV
Sbjct:   311 LSAESKDFLLKCLQKEPHLRHSASNLLQHPFV 342

GO:0005515 "protein binding" evidence=IPI

SGD|S000003631 BCK1 "MAPKKK acting in the protein kinase C signaling pathway" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 253 (94.1 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 51/94 (54%), Positives = 61/94 (64%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
             MAPE++    G +  VDIWSLGC VLEM   K PWS  E VAAMFKIG SK  P IP+D 
Sbjct:  1346 MAPEMVDTKQGYSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPEDT 1405

Query:    60 ---LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                +S  G++F+  C + NP  RPTA +LL HPF
Sbjct:  1406 LPLISQIGRNFLDACFEINPEKRPTANELLSHPF 1439

GO:0001101 "response to acid" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IEA;IDA;TAS

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0030010 "establishment of cell polarity" evidence=IMP

GO:0030242 "peroxisome degradation" evidence=IMP

GO:0004709 "MAP kinase kinase kinase activity" evidence=IGI;TAS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IMP

GO:0007243 "intracellular protein kinase cascade" evidence=IMP

GO:0007584 "response to nutrient" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0043332 "mating projection tip" evidence=IDA

TAIR|locus:2133559 MEKK1 "MAPK/ERK kinase kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 5.2e-20, P = 5.2e-20
 Identities = 53/98 (54%), Positives = 65/98 (66%)

Query:     1 MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
             MAPEVI  K+S G     DIWSLGCTVLEM T + P+S  E V A+F+IG    LP +PD
Sbjct:   496 MAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGT-LPEVPD 554

Query:    59 DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              LS + + FI  CL+ NP  RPTA +LL+HPFV+   P
Sbjct:   555 TLSLDARLFILKCLKVNPEERPTAAELLNHPFVRRPLP 592

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IGI

GO:0006970 "response to osmotic stress" evidence=IGI;IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009611 "response to wounding" evidence=RCA;IDA

GO:0003677 "DNA binding" evidence=IDA

GO:0019900 "kinase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=IMP;RCA;IPI

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

DICTYBASE|DDB_G0283265 mkkA "octicosapeptide/Phox/Bem1p domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 248 (92.4 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 51/108 (47%), Positives = 68/108 (62%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDD 59
             MAPEVIK + G   + DIWSLGC ++EMAT +PPWS    +AA M+ I +S  +P IP  
Sbjct:   664 MAPEVIKQT-GHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIASSNSIPNIPSH 722

Query:    60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
             +S E  DF+ LC +R+P  RP A +LL HPF+     L+  I  P +S
Sbjct:   723 MSQEAFDFLNLCFKRDPKERPDANQLLKHPFIMN---LDDNIQLPTIS 767

GO:0030587 "sorocarp development" evidence=IMP

GO:0009653 "anatomical structure morphogenesis" evidence=IMP

GO:0005938 "cell cortex" evidence=IDA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA;ISS

GO:0000186 "activation of MAPKK activity" evidence=IEA;ISS

GO:0000165 "MAPK cascade" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0030435 "sporulation resulting in formation of a cellular spore" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1N4V8 YSK4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 238 (88.8 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 50/93 (53%), Positives = 62/93 (66%)

Query:     1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDD 59
             MAPEVI N SG     DIWS+GCTV EMAT KPP +  + +AAMF IG  + L P +PD 
Sbjct:   366 MAPEVI-NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPDC 424

Query:    60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
              S+   DF+R CL R+   RP+AV+LL H F+K
Sbjct:   425 FSENAADFVRACLTRDQHERPSAVQLLKHSFLK 457

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	109
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-56
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-47
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-39
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-34
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-34
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-33
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-32
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-31
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-31
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-29
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-28
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-27
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-25
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-24
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-24
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-23
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-23
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-23
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-23
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-22
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-21
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-21
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-19
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-19
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-19
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-18
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-17
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-17
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	9e-17
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-16
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-16
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-16
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-16
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-16
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-15
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-15
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-15
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-14
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-14
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-14
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-14
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-14
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-13
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-13
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-13
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	6e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-12
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-12
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	3e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-12
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-12
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	5e-12
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-12
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-11
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-11
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-11
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-11
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-11
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-11
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-10
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-10
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	5e-10
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-09
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-09
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-09
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	9e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-08
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	9e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-07
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	2e-07
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-07
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-07
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	8e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	9e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-06
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-06
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	9e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	9e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-05
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	3e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	4e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	5e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	9e-05
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	1e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-04
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	7e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	7e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	7e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.001
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.001
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.003
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.003
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.004
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.004

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  175 bits (446), Expect = 1e-56
 Identities = 69/91 (75%), Positives = 73/91 (80%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI    G  LA DIWSLGCTVLEMAT KPPWSQ EGVAA+FKIG SKELP IPD L
Sbjct: 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHL 227

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SDE KDFI  CLQR+P  RPTA +LL+HPFV
Sbjct: 228 SDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  151 bits (383), Expect = 3e-47
 Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPDD 59
           MAPEVI+       A DIWSLGCTV+EMAT KPPWS+    +AA++KIG+S E P IP+ 
Sbjct: 170 MAPEVIRGEEYG-RAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEH 228

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           LS+E KDF+R CL+R+P  RPTA +LL HPF+
Sbjct: 229 LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  132 bits (333), Expect = 1e-39
 Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 6/96 (6%)

Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTIP 57
           MAPEVI      G   A DIWSLGC VLEMAT K PWS+ +     MF +G +   P IP
Sbjct: 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIP 228

Query: 58  D--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           D   LS EGKDF+  CL+ +P  RPTA +LL HPFV
Sbjct: 229 DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  118 bits (298), Expect = 3e-34
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S G +   DIWSLG T +E+A  +PP S    +  +F I  +   P++  + 
Sbjct: 165 MAPEVIKQS-GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNK 222

Query: 61  -SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
            S   KDF+ LCL ++P  RP+A +LL H F+K A  
Sbjct: 223 FSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score =  117 bits (294), Expect = 8e-34
 Identities = 52/95 (54%), Positives = 60/95 (63%), Gaps = 5/95 (5%)

Query: 1   MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPEVI + S G +  VDIWSLGC VLEM   + PWS  E +AAMFK+GN +  P IP D
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPD 236

Query: 60  ----LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
               LS    DF+  C   NP NRPTA +LL HPF
Sbjct: 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  114 bits (287), Expect = 8e-33
 Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI   SG + A DIWSLGCTV+E+ T  PP+     +AA+F+I      P +P+ +
Sbjct: 166 MAPEVI-EMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPP-LPEGI 223

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S E KDF+  C Q++P  RPTA +LL HP++
Sbjct: 224 SPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  111 bits (280), Expect = 8e-32
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PEVI +  G     D+WS+GCTV+EM T KPPW+++E +AA+FKI      P +P  +
Sbjct: 174 MSPEVI-SGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHV 232

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S + ++F+R     N   RP+A +LL H FV
Sbjct: 233 SPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  110 bits (277), Expect = 3e-31
 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 4/92 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           MAPEVI      +   DIWSLG T +E+A  KPP+S+   + A+FKI      P + +  
Sbjct: 164 MAPEVINGK-PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPE 221

Query: 60  -LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             SDE KDF++ CLQ+NP  RPTA +LL HPF
Sbjct: 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score =  110 bits (275), Expect = 4e-31
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDD 59
           MAPEVI N SG     DIWS+GCTV EMAT KPP +  + +AAMF IG  + L P +PD 
Sbjct: 175 MAPEVI-NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDS 233

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            S    DF+  CL R+   RP+A++LL H F+
Sbjct: 234 FSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  105 bits (264), Expect = 3e-29
 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 3/93 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
           MAPEV+    G   AVDIWSLG  + E+ T KPP+   + +  +FK         P    
Sbjct: 163 MAPEVLL-GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW 221

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           D+S E KD IR  L ++P  R TA + L HPF 
Sbjct: 222 DISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score =  101 bits (254), Expect = 7e-28
 Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 1   MAPEVI-KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPD 58
           MAPEVI K   G     DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+
Sbjct: 176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE 235

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            LS E K+FI  C + +P  R +A  LL  PF+
Sbjct: 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 99.6 bits (249), Expect = 4e-27
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 4/93 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPD 58
           MAPEVI+   G N   DIWSLG T +EMA  KPP+S    + A+F I N K  PT   P+
Sbjct: 166 MAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-KPPPTLSDPE 223

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             S E  DF++ CL ++P  RP+A++LL HPF+
Sbjct: 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 95.1 bits (236), Expect = 3e-25
 Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PEVI +  G     D+WSLGCTV+EM T KPPW++YE +AA+FKI      P +P  +
Sbjct: 176 MSPEVI-SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHI 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           S+  +DF+  C+     +RP+A +LL HPF +
Sbjct: 235 SEHARDFLG-CIFVEARHRPSAEELLRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 92.7 bits (231), Expect = 3e-24
 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEVIK        VDIWSLG   +EMA  +PP+ +   + A+F I  +K +P +  P+
Sbjct: 183 MAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI-TTKGIPPLKNPE 240

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
             S E KDF+  CL ++P  RP+A +LL HPF+K A P E   
Sbjct: 241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 91.4 bits (227), Expect = 6e-24
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+K +S    A DIWSLGC V+EM T K P+     + A+FKIG     P IP ++
Sbjct: 179 MAPEVVKQTSYTRKA-DIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASPEIPSNI 236

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S E  DF+    + +   RPTA +LL HPF+
Sbjct: 237 SSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 90.1 bits (223), Expect = 2e-23
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PEVI +  G     D+WS+ CTV+EM T KPPW++YE +AA+FKI      P +PD +
Sbjct: 176 MSPEVI-SGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGV 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SD  +DF++         RPTA  LL HPFV
Sbjct: 235 SDACRDFLKQIFVEEKR-RPTAEFLLRHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 89.2 bits (222), Expect = 4e-23
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           MAPEV+   +G    VD+WSLG  + E+ T KPP+S    +  +  I      P   D  
Sbjct: 165 MAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEP 224

Query: 59  ---DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
                S+E KD I+ CL ++P  RPTA ++L HP+ 
Sbjct: 225 KWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 89.2 bits (221), Expect = 5e-23
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE---GVAAMFKIGNSKELPTIP 57
           MAPEV++       + D+WS+GC ++EMAT KPPW+  +    +A +FKI ++   P+IP
Sbjct: 175 MAPEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIP 233

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
           + LS   +D    CL+  P +RP + +LL HP
Sbjct: 234 EHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 89.0 bits (221), Expect = 6e-23
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
           MAPEV++   G +   DIWS G T +E+AT   P+S+Y  +  +      +   L T  D
Sbjct: 173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGAD 232

Query: 59  D--LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
               S   +  I LCLQ++P  RPTA +LL H F
Sbjct: 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 88.0 bits (219), Expect = 1e-22
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE--GVAAMFKIGNSKELPTIPD 58
           M+PE I+  S    A DIWSLG T+LE A  K P+          + +       P++P 
Sbjct: 167 MSPERIQGESYSYAA-DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPA 225

Query: 59  DL-SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
           +  S E +DFI  CLQ++P  RP+A +LL HPF+K A 
Sbjct: 226 EEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 85.5 bits (211), Expect = 1e-21
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PEVI +  G     DIWS+GCTV+EM T KPPW+++E +AA+FKI      P +P  +
Sbjct: 176 MSPEVI-SGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHV 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SD  +DF++       L RP+A +LL H FV
Sbjct: 235 SDHCRDFLKRIFVEAKL-RPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 84.4 bits (209), Expect = 3e-21
 Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           MAPEVI      +   DIWSLG T+ EMAT  PP+S  +   AM  I  SK  P + D+ 
Sbjct: 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKP-PRLEDNG 226

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
            S   ++F+  CL   P  R +A +LL   ++K  +    +IL   +SR 
Sbjct: 227 YSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPVSILKELISRY 276

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 80.0 bits (198), Expect = 1e-19
 Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 1   MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEV       G +   DIW+LG T +E+A  +PP      + A+F I  S      P 
Sbjct: 168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN---FPPP 224

Query: 59  DLSDEGK------DFIRLCLQRNPLNRPTAVKLLDHPF 90
            L D+ K      DFI+ CL ++P  RPTA KLL HPF
Sbjct: 225 KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 80.2 bits (198), Expect = 2e-19
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 18/106 (16%)

Query: 1   MAPEVIKNSSGCNLA---------VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK 51
           MAPEVI       LA         VD+WSLG T +E+A  KPP      ++A++ I  + 
Sbjct: 178 MAPEVI-------LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN- 229

Query: 52  ELPTI-PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           + PT+  +D SD  ++F+  CLQ+ P +RP++ +LL H FV    P
Sbjct: 230 DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 79.6 bits (197), Expect = 2e-19
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 15/101 (14%)

Query: 1   MAPEVIKNSSGCNLA--------VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE 52
           MAPEVI     C+           D+WSLG T +E+A  KPP      + A+FKI  +  
Sbjct: 180 MAPEVI----ACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP 235

Query: 53  LPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            PT+  P++ S +  DFI  CL +N   RP   +LL+HPF+
Sbjct: 236 -PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 78.2 bits (193), Expect = 7e-19
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 7/97 (7%)

Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+       +  +   DIWSLG T++E+A  +PP  +   +  + KI  S E PT+
Sbjct: 170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS-EPPTL 228

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S    DF++ CL ++P +RPTA +LL HPFV
Sbjct: 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APEV+    G   AVD WSLG  + EM T KPP+   E    ++ KI         P+ 
Sbjct: 160 LAPEVLLGK-GYGKAVDWWSLGVLLYEMLTGKPPFYA-EDRKEIYEKILKDP--LRFPEF 215

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA-----VKLLDHPF 90
           LS E +D I   LQ++P  R  +     +K   HPF
Sbjct: 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIK--AHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 7/98 (7%)

Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+       +  +   DIWSLG T++EMA  +PP  +   +  + KI  S E PT+
Sbjct: 177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTL 235

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             P   S E +DF++  L ++P  RP+A +LL+HPFV 
Sbjct: 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 74.9 bits (184), Expect = 2e-17
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 1   MAPEVIKNSSGCNLAV-----DIWSLGCTVLEMATTKPPW--SQYEGVAAMFKIGNSKEL 53
           MAPE IK+             D+WSLG ++LEMA  + P+    Y  + A        + 
Sbjct: 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP 227

Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           PT+P   SD+ +DF+  CL + P  RPT  +LL+HP++ 
Sbjct: 228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLV 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 72.9 bits (179), Expect = 9e-17
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEVI         VDIWSLG  V+EM   +PP+     + AM +I ++   P +    
Sbjct: 182 MAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP-PKLKNLH 239

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAP 104
            +S   + F+   L R+P  R TA +LL+HPF+  A P   + + P
Sbjct: 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP--PSSIVP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW--SQYEGVAAMFKIGNSKELPTIPD 58
           M+PE + + S  +   DIWSLGC + E+    PP+       +A+  K G   +   IP 
Sbjct: 177 MSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG---KFRRIPY 232

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             S E  + I+  L  +P  RP+  +LL  P +
Sbjct: 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 72.0 bits (176), Expect = 2e-16
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S    +  +F I  +   PT+    
Sbjct: 168 MAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-PTLEGQY 225

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL ++P  RPTA +LL H F+
Sbjct: 226 SKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP---WSQYEGVAAMFKIGNSKELPTIP 57
           ++PE+ +N    N   DIWSLGC + E+ T K P    +  E      KI    + P IP
Sbjct: 170 LSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLE---LALKI-LKGQYPPIP 224

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
              S E ++ +   LQ++P  RP+  ++L  PF+
Sbjct: 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 70.9 bits (173), Expect = 5e-16
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+ S+  + A DIWSLG T +E+A  +PP S    +  +F I  +   PT+  + 
Sbjct: 168 MAPEVIQQSAYDSKA-DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-PTLTGEF 225

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+FI  CL ++P  RPTA +LL H F+
Sbjct: 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 70.5 bits (173), Expect = 6e-16
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 1   MAPEVI---KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           MAPE I    N  G ++  D+WSLG T++E+AT + P+  ++      K    +  P +P
Sbjct: 170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP 229

Query: 58  DD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
            +  S E +DF+  CL++N   RP   +LL HPF +   
Sbjct: 230 AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 70.1 bits (171), Expect = 1e-15
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI-P 57
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  + + PT+  
Sbjct: 184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLQS 242

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           ++ +D  + F+  CLQ+ P  RP + +LL H FV+   P    I
Sbjct: 243 NEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARVLI 286

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 70.2 bits (172), Expect = 1e-15
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 12/109 (11%)

Query: 1   MAPEVIKNS------SGCNLAVDIWSLGCTVLEMATTKPPWS---QYEGVAAMFKIGNSK 51
           M+PE I          G   A DIWSLG ++LE    + P+    Q +  + M  I  S+
Sbjct: 235 MSPERINTDLNHGAYDGY--AGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ 292

Query: 52  ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT 100
             P  P   S E + FI  CLQR P  R +A++LL HPF+  A P +  
Sbjct: 293 P-PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQ 340

Length = 353

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 69.3 bits (170), Expect = 1e-15
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-----KIGNSKELPT 55
           MAPE I   +  ++  DIWSLG +++E+AT + P+                I N +  P 
Sbjct: 166 MAPERI-QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN-EPPPR 223

Query: 56  IPDD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           +P    S + +DF+ LCL ++P  RP+  +LL+HPF+K 
Sbjct: 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 69.3 bits (169), Expect = 1e-15
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  + A DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 168 MAPEVIKQSAYDSKA-DIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 225

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL + P  RPTA +LL H F+
Sbjct: 226 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 67.3 bits (165), Expect = 4e-15
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 33/89 (37%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+      +   DIWSLG  + E+                                
Sbjct: 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
             E KD IR  LQ++P  RP+A ++L+H 
Sbjct: 188 -PELKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 67.4 bits (164), Expect = 1e-14
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI-P 57
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  + E PT+  
Sbjct: 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQS 246

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           ++ SD  ++F+  CLQ+ P +RPT+ +LL H FV    P
Sbjct: 247 NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 67.0 bits (163), Expect = 1e-14
 Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 7/97 (7%)

Query: 1   MAPEVIKNSSG----CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+   +      +   D+WSLG T++EMA  +PP  +   +  + KI  S E PT+
Sbjct: 170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTL 228

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S E KDF++ CL++N   R T  +LL HPFV
Sbjct: 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIGNSKELPTIP 57
           ++PE++        + D+W+LGC + +M T KPP+   ++Y       KI   K   + P
Sbjct: 189 VSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---TFQKI--LKLEYSFP 242

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLD----HPF 90
            +   + KD I   L  +P +R    +  D    HPF
Sbjct: 243 PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 15/105 (14%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG------VAAMFKIGNSKELP 54
           MAPE I+     ++  D+WSLG T+LE+A  + P+   EG      +  +  I N    P
Sbjct: 170 MAPERIQGKP-YSITSDVWSLGLTLLEVAQNRFPFPP-EGEPPLGPIELLSYIVNM-PNP 226

Query: 55  TIPDDL------SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
            + D+       S+E KDFI+ CL+++P  RPT   +L+HP++K 
Sbjct: 227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 65.8 bits (160), Expect = 3e-14
 Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 5/95 (5%)

Query: 1   MAPEV--IKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-ELPTIP 57
           MAPEV  ++   G N   DIW++G T +E+A  +PP      + A+F +  S  + P + 
Sbjct: 173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK 232

Query: 58  DDL--SDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           D +  S+    F+++ L +NP  RPTA KLL HPF
Sbjct: 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 66.3 bits (160), Expect = 4e-14
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 13/105 (12%)

Query: 1   MAPEVIKNSSGCNL--AVDIWSLGCTVLEMATTKPPW------SQYEGVAAMFKIGNSKE 52
           MAPEV+   S      + DIWSLG T+ E+ T  PP+      S       +     +  
Sbjct: 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234

Query: 53  LP-----TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           L      + P+ +S    D ++  L ++P NR ++   L H  + 
Sbjct: 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 65.5 bits (159), Expect = 6e-14
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  ++       
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 237

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
             S+  ++F+  CLQ+ P +RPT+  LL H FV    P 
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 64.0 bits (156), Expect = 1e-13
 Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 1   MAPEVIKN---SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           MAPEV K    S       DIWSLGC + EMAT  PP+         +K+   K  P IP
Sbjct: 168 MAPEVWKGRPYSYKS----DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-YPPIP 222

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
              S + ++FIR  LQ  P  RP   K+L  P V
Sbjct: 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 64.2 bits (156), Expect = 2e-13
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I    + EL   P+
Sbjct: 182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN-PE 239

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +LL HPF+K A PL
Sbjct: 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPL 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 63.5 bits (154), Expect = 3e-13
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI    +     +   D+WSLG T +E+    PP      V  +FKI  +   PT+
Sbjct: 195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP-PTL 253

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             P+        FI  CL ++   RP+   LL+HPF+K
Sbjct: 254 LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 63.1 bits (153), Expect = 3e-13
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 4/93 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           MAPEVI  +      VDIWSLG  V+EM   +PP+     V AM ++ +S   P + +  
Sbjct: 184 MAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKLKNAH 241

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            +S   +DF+   L R P  R TA +LLDHPF+
Sbjct: 242 KISPVLRDFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 62.4 bits (151), Expect = 6e-13
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 1   MAPEV--IKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-ELPTIP 57
           MAPEV  ++ + G N   DIW++G T +E+A  +PP      + A+F +  S  + P + 
Sbjct: 173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLK 232

Query: 58  DDL--SDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           D    S    +F+++ L +NP  RPTA +LL H F
Sbjct: 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 32/119 (26%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------------------------PWSQ 37
           APE++  S+  +  VDIW+LGC + E+ T +P                         W +
Sbjct: 166 APEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPE 225

Query: 38  -YEGVAAM-FKIGNSKELPTIPDDL----SDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            Y+  + + F+       PT    L    S E  D I+  L+ +P  RPTA + L HP+
Sbjct: 226 GYKLASKLGFRFPQFA--PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE+  N    N   D+W+LGC V EMAT K  ++  +  + +++I   K LP +P D 
Sbjct: 169 MSPELFSNKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPKDY 226

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S E  + I   L + P  RP+   +L  P++
Sbjct: 227 SPELGELIATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 60.4 bits (146), Expect = 3e-12
 Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI         VDIWSLG  V+EM   +PP+     + AM +I ++  LP    D 
Sbjct: 185 MAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN--LPPRVKDS 241

Query: 61  ---SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              S   + F+ L L R P  R TA +LL HPF+K A P
Sbjct: 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 60.4 bits (147), Expect = 3e-12
 Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 33/124 (26%)

Query: 2   APEVI-KNSSGCNLAVDIWSLGCTVLEMATTKPPWS------------------------ 36
           +PEV+ +N  G N   DI+S+G T  E+A    P+                         
Sbjct: 176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKST 235

Query: 37  --QYEGVAAMFKIGNSKELPTIPDD------LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
              YE   +  +  N         D       S+    F+ LCLQR+P +RP+A +LL+H
Sbjct: 236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295

Query: 89  PFVK 92
            F K
Sbjct: 296 SFFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I    + EL   P+
Sbjct: 182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN-PE 239

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +LL HPF+K A PL
Sbjct: 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 4e-12
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKI-G--------N 49
           APE++  S   + AVDIWS+GC   EM T KP +   S+ + +  +F+I G         
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPG 225

Query: 50  SKELPTIPDD---------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             +LP                    L  EG D +   LQ NP  R +A + L HP+
Sbjct: 226 VTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 60.5 bits (146), Expect = 4e-12
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I    + EL   P+
Sbjct: 182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN-PE 239

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +LL HPF+K A PL
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 60.0 bits (145), Expect = 5e-12
 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI    +  S  +   D+WSLG T +E+    PP +    + A+FKI  +   PT+
Sbjct: 191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPP-PTL 249

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P+  S+E  DFIR CL ++   RPT   LL H F+
Sbjct: 250 HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 60.1 bits (146), Expect = 5e-12
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 13/101 (12%)

Query: 1   MAPEVI---KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF----KIGNSKEL 53
           MAPE I     +   ++  D+WSLG +++E+AT + P   Y+     F    KI    E 
Sbjct: 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP---YKNCKTEFEVLTKILQE-EP 236

Query: 54  PTIPDD--LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           P++P +   S +   F+ LCL ++   RP   +LL HPF++
Sbjct: 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 12/97 (12%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-----SQYEGVAAMFKIGNSKELPT 55
           MAPEV+    G ++AVD WSLG T  E    K P+     +  + + A  +         
Sbjct: 166 MAPEVLC-RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE----TADVL 220

Query: 56  IPDDLSDEGKDFIRLCLQRNPLNR--PTAVKLLDHPF 90
            P   S E  D I   L+R+P  R       L +HP+
Sbjct: 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGNSKELPTIPD 58
           +APE+I N  G + +VD WSLG  + E+ T +PP+ + +   +     I         P+
Sbjct: 159 VAPEIILNK-GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN 217

Query: 59  DLSDEGKDFIRLCLQRNPLNR 79
            +    KD I+  L+RNP  R
Sbjct: 218 YIDKAAKDLIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 29/120 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK---------------------PPWSQYEG 40
           APE++ +SS    A+DIWS+GC   E+ T K                     P     + 
Sbjct: 174 APELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233

Query: 41  VA---AMFKIGNSKELPTIP-----DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +    A   + +  + P  P        S E  D +   L  +P  R TA + L HP++ 
Sbjct: 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY--EGVAAMFKIGNSKELPTIPD 58
           +APEV+ +  G    VD WSLG  V EM      WS +  E    M++     ++    +
Sbjct: 163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG---WSPFYAEDTQQMYRNIAFGKVRFPKN 219

Query: 59  DLSDEGKDFIRLCLQRNPLNR----PTAVKLLDHPFVK 92
            LSDEG+ F++  L RNP +R      AV+L +HPF  
Sbjct: 220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFA 257

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 58.5 bits (141), Expect = 2e-11
 Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI       +  +   DIWSLG T +EMA   PP      + A+F I  +      
Sbjct: 188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLK 247

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
               S +  DFI  CL +N L+RP+  +LL HPF+
Sbjct: 248 SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 58.3 bits (141), Expect = 2e-11
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 9/113 (7%)

Query: 1   MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELPTIP 57
           MAPEVI+  S G + AVD WSLG    E+ T   P++      +  +I     K  P  P
Sbjct: 173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFP 232

Query: 58  DDLSDEGKDFIRLCLQRNPLNR---PTAVKLLDHPFVKG---AAPLERTILAP 104
             +S E +DFI+  L+++P  R     A ++ +HPF +G        + I AP
Sbjct: 233 KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAKRIPAP 285

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD-- 59
           APEV   + G N   D WSLG  + EM    PP+          KI N KE    PD+  
Sbjct: 207 APEVFLQT-GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVP 265

Query: 60  LSDEGKDFIR--LCLQRNPLNRPTAVKLLDHPFVKG 93
           LS E KD I+   C     L      ++  HPF KG
Sbjct: 266 LSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKG 301

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSK-ELPTIPD 58
           +APEVI    G +  VD WSLGC + E     PP+   E    +F  I N K E P    
Sbjct: 168 IAPEVILGQ-GHSKTVDWWSLGCILYEFLVGIPPF-HGETPEEIFQNILNGKIEWPEDV- 224

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAV---KLLDHPFVKG 93
           ++SDE  D I   L  +P  R  A    ++ +HPF KG
Sbjct: 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           +APEV++  +   L  D WSLG  + EM    PP+          KI N KE    P D 
Sbjct: 197 IAPEVLR-GTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDP 255

Query: 60  -LSDEGKDFIRLCLQRNPLNRPTAVK-LLDHPFVKG 93
            +S E  D I   L   P +R  + + +  HPF KG
Sbjct: 256 PVSPEAIDLICRLLCD-PEDRLGSFEEIKSHPFFKG 290

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 57.1 bits (138), Expect = 5e-11
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE++  S G   AVD WSLG  + +M T  PP++       + KI   K    +P  L
Sbjct: 167 MAPEILMRS-GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL--NLPPYL 223

Query: 61  SDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVK 92
           + E +D ++  L+RNP +R       A ++  HPF +
Sbjct: 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 56.7 bits (137), Expect = 6e-11
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIPDD 59
           M+PE I   +G N   DIWSLGC + EMA  + P+   +  + ++ K     + P +P D
Sbjct: 173 MSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD 231

Query: 60  -LSDEGKDFIRLCLQRNPLNRPTA 82
             S+E +D +  C+  +P  RP  
Sbjct: 232 HYSEELRDLVSRCINPDPEKRPDI 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I    + EL   P+
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 240

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL  +   R +A +LL H F+K A PL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 55.3 bits (133), Expect = 2e-10
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 1   MAPEVIKNSSGCNLAV--DIWSLGCTVLEMATTKPPWSQYEGVAA------MFKIGNSKE 52
           MAPE I   SG    +  D+WSLG + +E+A  + P+ Q +          + +    ++
Sbjct: 160 MAPERI---SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216

Query: 53  LPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            P +P    S++   FI  C+++ P  RP    L+DHPF+
Sbjct: 217 PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI       +  +   D+WSLG T +EMA   PP      + A+F I  +      
Sbjct: 178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK 237

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
               S + + FI  CL +N   RPT  +L+ HPF+
Sbjct: 238 SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--PWS----QYEGV-------------- 41
           APE++  S+     VD+WS+GC + EM   KP  P +    Q E +              
Sbjct: 180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239

Query: 42  ------AAMFKIGNSKE---LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                 A M     S+    L  +    SD+  D ++  L  NP  R TA + L+HP+V 
Sbjct: 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE +K+        D+WS G  + E+ T  + P+        +  + +   LP  P++
Sbjct: 171 MAPESLKDGK-FTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLP-RPEN 228

Query: 60  LSDEGKDFIRLCLQRNPLNRPT 81
             DE  + +  C   +P +RPT
Sbjct: 229 CPDELYELMLQCWAYDPEDRPT 250

Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 54.4 bits (131), Expect = 4e-10
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           ++PE+ ++    N   D+W+LG  + E  T K P+      A + KI      P +    
Sbjct: 168 LSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-FPPVSQMY 225

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
           S +    I  CL ++   RP   +LL +P
Sbjct: 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.4 bits (131), Expect = 4e-10
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 12/106 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE----GVAAMFKIGN------S 50
           M+PE I+      +  D+WSLG +++E+A  K P++       G      I +       
Sbjct: 169 MSPERIQ-GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ 227

Query: 51  KELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
           +  P +P  D  ++ +DF+  CL ++P  RPT  +L   P    A 
Sbjct: 228 EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 54.3 bits (131), Expect = 5e-10
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 1   MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGNSKEL-P 54
           MAPE I  S+  G ++  D+WSLG T+ E+AT K P+ ++  V         G+   L  
Sbjct: 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSN 233

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +   + S    +FI LCL ++   RP   +LL+HPF+K
Sbjct: 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 53.3 bits (128), Expect = 1e-09
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-SKELP-TIPD 58
           MAPEV++     + +VD ++LGCT+ EM   + P+ Q +      ++   + E+    PD
Sbjct: 161 MAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD 219

Query: 59  DLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVK 92
             S E KD     LQ++P  R      +A ++ +HP  K
Sbjct: 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++  LP    +L
Sbjct: 183 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--LPPKLKNL 239

Query: 61  ---SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              S   K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 52.6 bits (126), Expect = 2e-09
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE +K+  G +   DIWSLGC + EM      +     ++ + +I      P++P+  
Sbjct: 172 MSPEALKHQ-GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG-PTPSLPETY 229

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S +    ++  L ++P  RP+A ++L +PF+
Sbjct: 230 SRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 28/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----GNSKE----- 52
           APE++    G +  VDIWS+GC   E+ + +P +     +  +FKI    G         
Sbjct: 166 APELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPK 225

Query: 53  --------LPTIPD-----------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                     + P            + S +  D +   L  +P  R TA + L HP+
Sbjct: 226 FTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 13/113 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE+I  S G   AVD W+LG  + EM    PP+   +    ++ KI   K     P  
Sbjct: 165 LAPEIIL-SKGYGKAVDWWALGILIYEMLAGYPPFFD-DNPIQIYEKILEGK--VRFPSF 220

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVK-----LLDHPFVKGA---APLERTILAP 104
            S + KD IR  LQ +   R   +K     + +HP+  G    A L+R I AP
Sbjct: 221 FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAP 273

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 52.1 bits (125), Expect = 3e-09
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE+ +     N   DIW+LGC + E+ T K  +     +  + KI        +    
Sbjct: 168 MSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKI-VQGNYTPVVSVY 225

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           S E    +   LQ++P  RPTA ++LD P 
Sbjct: 226 SSELISLVHSLLQQDPEKRPTADEVLDQPL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT------ 55
           APEV+  S   +  VDIWS+G    EMAT KP +     +  +F+I      PT      
Sbjct: 169 APEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228

Query: 56  ---IPD------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
              +PD                  +L ++G D +   L  +P  R +A K L+HP+
Sbjct: 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 51.4 bits (123), Expect = 4e-09
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 20/100 (20%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL------- 53
           ++PE+ +N    N + DIW+LGC + EM T K            F+ GN K L       
Sbjct: 168 LSPEICENRPYNNKS-DIWALGCVLYEMCTLK----------HAFEAGNMKNLVLKIIRG 216

Query: 54  --PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P +    S + ++ +    +RNP +RP+   +L+  F+
Sbjct: 217 SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 51.5 bits (123), Expect = 5e-09
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 20/119 (16%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-------SQYEGVAAMFKIGNSKEL 53
           MAPE+I+   G   AVD WSLG  + E+ T   P+       +Q E    + K       
Sbjct: 173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD----- 227

Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG---AAPLERTILAP 104
           P  P  +  E +D +   L+++P  R       A ++ +HPF KG    A   R +  P
Sbjct: 228 PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPP 286

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 26/115 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------PWSQ-YEG 40
           APEV+  S+  +  VDIWS+GC   EM+  +P                    P  Q + G
Sbjct: 179 APEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG 238

Query: 41  VAAM-----FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           V+ +     F     ++L     DLS EG D ++  L+ +P  R +A   L HP+
Sbjct: 239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 50.9 bits (122), Expect = 9e-09
 Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 45/134 (33%)

Query: 1   MAPEVIKNSSGCNLAV--DIWSLGCTVLEMATTK---PPWSQYEGVAAMFK--------- 46
           M+PE ++   G +  V  DIWSLG +++EMA  +   PP    E + AMF          
Sbjct: 165 MSPERLQ---GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAK 220

Query: 47  -------------------------IGNSKELPTIPDD-LSDEGKDFIRLCLQRNPLNRP 80
                                    I N    P +P    SDE +DF+  CL++NP  R 
Sbjct: 221 ESHRPVSGHPPDSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERA 279

Query: 81  TAVKLLDHPFVKGA 94
              +L  HPF+K A
Sbjct: 280 DLKELTKHPFIKRA 293

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----GN-------- 49
           APE++  S   +  VDIWS+GC   EM   +P +     +  +F+I    G         
Sbjct: 167 APEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPG 226

Query: 50  ---------------SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                           ++L  +  +L ++G D +   L  +P  R +A   L HP+
Sbjct: 227 VTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE +K         D+WS G  + E+ T  + P+        +  + N   LP  P +
Sbjct: 170 MAPESLKEGK-FTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLP-QPPN 227

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
              E  D +  C   +P +RPT  +L++
Sbjct: 228 CPPELYDLMLQCWAEDPEDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           MAPEV+    G +  VD WSLGC + E     PP+S          +   KE    P   
Sbjct: 165 MAPEVL-RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD 223

Query: 59  ----DLSDEGKDFIRLCLQRNPLNRPTAVK-LLDHPFVKG 93
               +LSDE  D I   +  +P  R  +++ + +HPF K 
Sbjct: 224 DPRFNLSDEAWDLITKLIN-DPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 48.9 bits (116), Expect = 5e-08
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMFKIGNSKELPTIPDD 59
           M+PE I + +G N   DIWSLGC + EMA  + P +     + ++ K     + P +P D
Sbjct: 173 MSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 231

Query: 60  -LSDEGKDFIRLCLQRNPLNRP 80
             S+E +  + +C+  +P  RP
Sbjct: 232 HYSEELRQLVNMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 48.6 bits (116), Expect = 5e-08
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+ N  G   + D WS G  + EM T   P+   +    M  I  +K    +P  L
Sbjct: 165 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--GMPQFL 221

Query: 61  SDEGKDFIRLCLQRNPLNR 79
           S E +  +R   +RNP NR
Sbjct: 222 SPEAQSLLRALFKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE +K         D+WS G  + E+ T  + P+        +  +     LP  P +
Sbjct: 171 MAPESLKEGK-FTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLP-KPPN 228

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
              E    +  C   +P +RPT  +L++
Sbjct: 229 CPPELYKLMLQCWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL-S 61
           PE++KN      A D+W+ GC + +M T +PP+     ++   KI  +   P +P+ + S
Sbjct: 182 PEIVKNEPYGEKA-DVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP-LPEGMYS 239

Query: 62  DEGKDFIRLCLQRNPLNRPTAVKL 85
           ++  D I  CL  +   RP  +++
Sbjct: 240 EDVTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 48.2 bits (115), Expect = 9e-08
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 29/118 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----GNSKE----- 52
           APE++   +    AVDIW++GC V EM T +P +     +  ++ I    GN        
Sbjct: 168 APELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227

Query: 53  -----------LPTIPD---------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                      LP + +          LS    D  + CL+ +P +RP++ +LL H F
Sbjct: 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 26/114 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKI----------- 47
           APEV+  SS     VD+WS+GC   E+   +P +   S+ + +  +F +           
Sbjct: 174 APEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232

Query: 48  -----------GNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                         +   +   ++ +EG D ++  L  NP  R +A + L HP+
Sbjct: 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 14/101 (13%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK------IGNSKELP 54
           +APE I    G +   D WSLGC + E     PP+   E   A+F       I   +E+ 
Sbjct: 160 LAPETI-LGVGDDKMSDWWSLGCVIFEFLFGYPPFHA-ETPDAVFDNILSRRINWPEEVK 217

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPFVK 92
                 S E  D I   L  +P  R  A    ++  HPF K
Sbjct: 218 EF---CSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK---------------------PPWSQYEG 40
           APE++      + AVDIWSLGC   EM T +                     P    + G
Sbjct: 168 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 227

Query: 41  VAAM------FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           V ++      F     ++   +   L ++G+D +   L  +P  R +A   L HPF
Sbjct: 228 VTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+  S      DI+SLG T+ E    + P+++   ++A+ +I  +      P D 
Sbjct: 71  MAPEVIQGQSYTE-KADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR 129

Query: 61  SDEGK--------DFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
           S+           DF+RLC  R P  R  A   L H     A  LE
Sbjct: 130 SNLEGVSAARSFEDFMRLCASRLPQRREAANHYLAHCRALFAETLE 175

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAA--MFKIGNSKELPTIP 57
           MAPE++K     +  VD +++GC++ EM   + P+  + E VA   + +     E+    
Sbjct: 161 MAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEH 219

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
            + ++E KD  RL L + P +R  + +  D P
Sbjct: 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+ +N    N + DIWSLGC + E+ T K P+        + K+      P +P   S 
Sbjct: 169 PEIWENMPYNNKS-DIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-LPSHYSY 226

Query: 63  EGKDFIRLCLQRNPLNRPTAVKLL 86
           E +  I+   +RNP +RP+A  +L
Sbjct: 227 ELRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 18/117 (15%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY------EGVAAMFKIGNSKELP 54
           MAPEV+KN      + D W LGC + EM   K P+ Q       E V    K    +E  
Sbjct: 168 MAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK--EDQE-- 222

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKGA--APLERTILAP 104
              +  S+  +   R  L ++P  R       A ++  HPF + A    LE  +L P
Sbjct: 223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           ++PE+ +N    N   DIWSLGC + E+ T K P+        + KI      P  P + 
Sbjct: 169 LSPEICQNRPYNN-KTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP-NF 226

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S + +  I    + +P +RP+   +L  PF+
Sbjct: 227 SRDLRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAA---MFKIGNSKELPT 55
           MAPE +K+        D+WS G  + E+ T    P    Y G++    +  +     LP 
Sbjct: 174 MAPESLKDGI-FTSKSDVWSFGVLLWEIFTLGATP----YPGLSNEEVLEYLRKGYRLP- 227

Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            P+   DE  + +  C Q +P +RPT  +L++ 
Sbjct: 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIP 57
           M+PE I + +G N   DIWSLGC + EMA  + P+  Y     +F +    E    P +P
Sbjct: 173 MSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPF--YGDKMNLFSLCQKIEQCDYPPLP 229

Query: 58  DD-LSDEGKDFIRLCLQRNPLNRP 80
            +  S++ ++ + +C+  +P  RP
Sbjct: 230 TEHYSEKLRELVSMCIYPDPDQRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 8e-07
 Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           +APE I    G     D WSLG  + E     PP+          KI N +E    PDD 
Sbjct: 215 IAPE-IFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI 273

Query: 60  -LSDEGKDFIR--LCLQRNPLNRPTAVKLLDHPFVKGAA-PLERTILAPELSRL 109
            LS E +D IR  +    N L R  A ++  HPF +G      R I AP + +L
Sbjct: 274 HLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRGVDWDTIRQIRAPFIPQL 327

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 45.4 bits (107), Expect = 9e-07
 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 10/113 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPD 58
           MAPEVI N      + D W LGC + EM   + P+ + +      ++     ++     +
Sbjct: 168 MAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE 226

Query: 59  DLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKGA--APLERTILAP 104
             S++ K   R+ L +NP  R       A  +  HP  K      LE  +L P
Sbjct: 227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 17  DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIPDDLSDEGKDFIR--LC 71
           D WSLG  + EM   + P+     V    KI N KE    P    D+S+E KD IR  +C
Sbjct: 190 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLIC 249

Query: 72  LQRNPLNRPTAVKLLDHPFVKG 93
                L R       DHPF +G
Sbjct: 250 SPETRLGRNGLQDFKDHPFFEG 271

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV+  + G     D WS+G  + EM   +PP+          K+ N +    IP   
Sbjct: 211 IAPEVLLRT-GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQA 269

Query: 59  DLSDEGKDFI-RLCLQRNP---LNRPTAVKLLDHPFVKG 93
            LS E  D I RLC        L +  A ++  HPF KG
Sbjct: 270 KLSREASDLILRLC--CGAEDRLGKNGADEIKAHPFFKG 306

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 29/118 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELP----- 54
           APE++   +     VD+W++GC   E+ T +P W     V  ++ I  +    +P     
Sbjct: 168 APELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227

Query: 55  ----------TIPD------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                     +IP+            ++S     F++ CLQ +P  R +  +LL+HP+
Sbjct: 228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.5 bits (105), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 13  NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCL 72
           N   DIW+LGC + E+A+ K  +      A + KI +    P I D  S + +  I   L
Sbjct: 179 NQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP-ISDRYSPDLRQLILSML 237

Query: 73  QRNPLNRPTAVKLLDHPFV 91
             +P  RP   +++  P  
Sbjct: 238 NLDPSKRPQLSQIMAQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 27/118 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------ 49
           APE++  S   +  VDIWS+GC   EM   KP +     +  +FKI              
Sbjct: 171 APEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230

Query: 50  ---------------SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                           K+L T+   L   G D +   L+ +P  R TA   L+H + K
Sbjct: 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 41/126 (32%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGVAA---------MFK 46
           APE++ N    N  VDIWS+GC + E+ T K          Q + +           + K
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242

Query: 47  IGNS------KELPTIPDDLSDEGKDFIRLCLQRNPL--------------NRPTAVKLL 86
           I +       + LP +P       KDF  +    NPL               R TA + L
Sbjct: 243 ISSESARNYIQSLPQMPK------KDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296

Query: 87  DHPFVK 92
            HP++ 
Sbjct: 297 AHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 1   MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELPTIP 57
           MAP++++    G + AVD WS+G  + E+ T   P++      +  +I     K  P  P
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 232

Query: 58  DDLSDEGKDFIRLCLQRNPLNR----PT-AVKLLDHPFVK 92
            ++S   KD I+  L ++P  R    P+ A ++  HPF +
Sbjct: 233 QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ 272

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   A+DIWS+GC + EM + +P
Sbjct: 177 APEIMLNSKGYTKAIDIWSVGCILAEMLSNRP 208

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE ++  +  + A D+W  G T+ EM T  + PW+   G   + KI    E    P+ 
Sbjct: 167 CAPESLRTRTFSH-ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEA 225

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
              +  + +  C   NP +RPT   L +
Sbjct: 226 CPQDIYNVMLQCWAHNPADRPTFAALRE 253

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 26/114 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD--- 58
           APEV+  SS     VD+WS+GC   EM   KP +     V  + KI +   LP   D   
Sbjct: 177 APEVLLQSSYAT-PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235

Query: 59  ----------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                                 D+ + GKD +  CL  NP  R +A   L HP+
Sbjct: 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 33/110 (30%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEM--ATTKPPWSQYEGVAAMFKIGNSKEL------ 53
           APEVI    G   AVD W+LG  + EM   TT  P          FK  N  E       
Sbjct: 200 APEVIS-GDGHGSAVDWWTLGILLYEMLYGTT--P----------FKGSNRDETFSNILK 246

Query: 54  --PTIP--DDLSDEGKDFIRLCLQRNPLNR------PTAVKLLDHPFVKG 93
              T P    +S   +D IR  L ++P  R         +K   HPF +G
Sbjct: 247 KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ--HPFFRG 294

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 42.7 bits (100), Expect = 7e-06
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           +APEV   + G N   D WSLG  + EM    PP+          K+ N KE    P + 
Sbjct: 203 IAPEVFMQT-GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEV 261

Query: 60  -LSDEGKDFI-RLCL-QRNPLNRPTAVKLLDHPFVKG 93
            +S++ KD I R C    N +      ++  HPF +G
Sbjct: 262 PISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEG 298

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 11/112 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEVI+ S G   AVD W++G  + E     PP+          KI   +     P+  
Sbjct: 182 LAPEVIQ-SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK--FPNWF 238

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVK-----LLDHPFVKGA---APLERTILAP 104
               +D ++  LQ +   R   +K     + +HP+  GA       R   AP
Sbjct: 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAP 290

Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (99), Expect = 9e-06
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE++    G   AVD W+LG  + EM T  PP+   E V  M++    + L   PD  
Sbjct: 160 LAPELL-LGHGYTKAVDWWTLGVLLYEMLTGLPPFYD-ENVNEMYRKILQEPL-RFPDGF 216

Query: 61  SDEGKDFIRLCLQRNPLNR---PTAVKLLDHPF 90
             + KD +   L R+P  R     A ++ +HPF
Sbjct: 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 9e-06
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 34/121 (28%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-------------------------- 35
           APE++   +     VD+W++GC + E+   +P +                          
Sbjct: 169 APELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL 228

Query: 36  ----SQYEGVA--AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
                ++ GVA     +  + +     P  +S    DF++ CL+ +P  R T  +LL HP
Sbjct: 229 FSSNPRFAGVAFPEPSQPESLERRY--PGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286

Query: 90  F 90
           +
Sbjct: 287 Y 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 24/105 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL------- 53
           +APE++        AVD W+LG  + EM   + P          F+  +  EL       
Sbjct: 163 IAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSP----------FEGDDEDELFQSILED 211

Query: 54  -PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVK-----LLDHPFVK 92
               P  LS E K  ++  L +NP  R   +      +  HPF +
Sbjct: 212 EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFR 256

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 29/121 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--PWSQYEGVAAMF-------------K 46
           APE++ +      A+D+WS+GC   EM   +   P   Y     +              +
Sbjct: 179 APELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238

Query: 47  IGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           IG+ +       LP              S E  D +   LQ +P  R T  + L HPF+ 
Sbjct: 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298

Query: 93  G 93
            
Sbjct: 299 Q 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE++K     N +VD WS G  + EM   + P+   E    +F  I N  + P  P  
Sbjct: 163 IAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHG-EDEDELFDSILN--DRPHFPRW 218

Query: 60  LSDEGKDFIRLCLQRNPLNR-PTAVKLLDHPFVKGA--APLERTILAP 104
           +S E KD +    +R+P  R      +  HPF +G     LE+  + P
Sbjct: 219 ISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERLEKREIPP 266

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 35/121 (28%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK-----------------------PPWSQ- 37
           APEVI N    N  VDIWS+GC + EM T K                       P + Q 
Sbjct: 182 APEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241

Query: 38  YEGVAAMFKIGNSKELPTIP-DDLS-------DEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
            E  AA   I   K LP  P  D S        +  D +   L+ +   R TA + L+HP
Sbjct: 242 LEDKAAKSYI---KSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298

Query: 90  F 90
           +
Sbjct: 299 Y 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 67  FIRLCLQRNPLNRPTAVKLLDHPFVK 92
           F+  CLQRNP  RP+A  LL+H F K
Sbjct: 286 FVEQCLQRNPDARPSASTLLNHSFFK 311

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT---IPD 58
           APEVI N       VDIWS+GC + EM T KP +  ++ +  + +I      P+   +  
Sbjct: 183 APEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242

Query: 59  DLSDEGKDFIRLC--LQRN------PLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
             S++ K++++     ++       P   P AV +L+   V  A   E  I A E
Sbjct: 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDA---ESRITAAE 294

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+ +       A D++SLG  + E+ T K P+        M K    +  P +P  +
Sbjct: 212 VAPEIWRRKPYSKKA-DMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP-LPPSI 269

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           S E ++ +   L  +P  RP++ KLL+ P  K
Sbjct: 270 SPEMQEIVTALLSSDPKRRPSSSKLLNMPICK 301

Length = 496

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 5e-05
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW 35
           +APEVI+ S G N AVD W+LG  + EM    PP+
Sbjct: 165 LAPEVIQ-SKGHNKAVDWWALGILIYEMLVGYPPF 198

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.2 bits (94), Expect = 6e-05
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--IGNSKELPTIPD 58
           +APEVI    G    VD W++G  + E      P+   +    +F   I +  E P   +
Sbjct: 183 IAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFG-DTPEELFGQVISDDIEWPEGDE 240

Query: 59  DLSDEGKDFIRLCLQRNPLNR---PTAVKLLDHPFVKG 93
            L  + +D I   L++NPL R     A ++  H F  G
Sbjct: 241 ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 39.7 bits (93), Expect = 7e-05
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 26/117 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------------PW 35
           APE++  +   + AVD+WS+GC   E+ T KP                          P 
Sbjct: 201 APELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQ 260

Query: 36  SQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           ++   +   F     K+L TI  + SD+  D ++  L+ NPL R +A + L H + K
Sbjct: 261 AKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317

Length = 335

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 39.6 bits (93), Expect = 9e-05
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 2   APEVI---KNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIP 57
           APE I   K SS      D+WS G T+ E  +    P+ + +G   +  + + + LP  P
Sbjct: 166 APECINYGKFSS----KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPR-P 220

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKL 85
           ++   E    +  C +  P +RPT  +L
Sbjct: 221 EECPQEIYSIMLSCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 39.8 bits (93), Expect = 9e-05
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 1   MAPEVIKNSSGCNL---AVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           ++PEV+K+  G        D WS+G  + EM     P+     V    KI + K   T P
Sbjct: 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFP 269

Query: 58  DD--LSDEGKDFIRLCLQRNP--LNRPTAVKLLDHPFVK 92
           DD  +S + KD I   L      L R    ++  HPF K
Sbjct: 270 DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFK 308

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 46/138 (33%)

Query: 1   MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTK------------------PPWSQYEG- 40
           ++PE+++    G N+  DI+S+G T  E+AT +                  PP+S  +  
Sbjct: 175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234

Query: 41  -------------------------VAAMFKIGNSKELPT-IPDDLSDEGKDFIRLCLQR 74
                                     A M +   S+ L T      S   ++ + LCLQ+
Sbjct: 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQ 294

Query: 75  NPLNRPTAVKLLDHPFVK 92
           +P  RP+A  LL H F K
Sbjct: 295 DPEKRPSASSLLSHAFFK 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 17  DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIPDDLSDEGKDFIR--LC 71
           D WSLG  + EM   + P+     V    KI N KE    P    D+S++ KD IR  +C
Sbjct: 190 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLIC 249

Query: 72  LQRNPLNRPTAVKLLDHPFVKG 93
            + + L +        HPF  G
Sbjct: 250 SREHRLGQNGIEDFKQHPFFTG 271

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 21/91 (23%)

Query: 1   MAPEVIKN-----SSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVA---AMFKIGNS 50
           MAPE +K+      S      D+WS G  + EMAT   +P    Y+G++    +  + + 
Sbjct: 188 MAPESLKDGVFTTKS------DVWSFGVVLWEMATLAEQP----YQGLSNEEVLKFVIDG 237

Query: 51  KELPTIPDDLSDEGKDFIRLCLQRNPLNRPT 81
             L  +P++  D+  + +R+C Q NP  RPT
Sbjct: 238 GHLD-LPENCPDKLLELMRMCWQYNPKMRPT 267

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 29/119 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF---------------K 46
           APE++ +      A+D+WS+GC + E+   KP +   + V  +                +
Sbjct: 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236

Query: 47  IGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           IG+ K       LP IP         + +    D +   L  +P  R +  + L+HP++
Sbjct: 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------ 49
           AP+V+  S   + ++DIWS+GC + EM T +P +        + KI              
Sbjct: 168 APDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPG 227

Query: 50  SKELPTI--------PDDLSD-------EGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             +LP          P DL          G D +   LQ NP  R +A   L HP+
Sbjct: 228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKIGNSKELPTIPDD 59
           MAPEV++     + + D +SLGC + ++     P+ Q++                 +PD 
Sbjct: 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 221

Query: 60  LSDEGKDFIRLCLQRNPLNR-------PTAVKLLDHPFVKG 93
            S E +  +   LQR+   R          VK  +HPF + 
Sbjct: 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK--EHPFFRS 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT------ 55
           APE++  ++     +D+WSLGC + EM    P +S    V  + +I      PT      
Sbjct: 238 APELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297

Query: 56  ---------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                                 P    D+  +FI   L+  PL R   ++ L  PF
Sbjct: 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353

Length = 440

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           +APEV   + G N   D WSLG  + EM    PP+          K+ N KE    P + 
Sbjct: 203 IAPEVFMQT-GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEV 261

Query: 60  -LSDEGKDFI-RLCLQ 73
            +S++ KD I R C +
Sbjct: 262 PISEKAKDLILRFCCE 277

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 17  DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-DDLSDEGKDFIRLCLQRN 75
           D+W+LGC + E+ + K P+ +    + +  I   K  P +P    S E    I+  L  +
Sbjct: 225 DMWALGCIIYELCSGKTPFHKANNFSQL--ISELKRGPDLPIKGKSKELNILIKNLLNLS 282

Query: 76  PLNRPTAVKLLDHPFVKGAAP 96
              RP+A++ L +  +K   P
Sbjct: 283 AKERPSALQCLGYQIIKNVGP 303

Length = 1021

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 1   MAPEVIKNSSGCNL---AVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           ++PEV+K+  G        D WS+G  + EM     P+     V    KI N K   T P
Sbjct: 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 269

Query: 58  D--DLSDEGKDFIRLCLQRNP--LNRPTAVKLLDHPFVK 92
           D  D+S E K+ I   L      L R    ++  H F K
Sbjct: 270 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 308

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 12/99 (12%)

Query: 1   MAPEV---IKNSSGCNLAV--DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT 55
           +APEV   +         V  D WSLG    EM   + P+ +         I N +    
Sbjct: 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK 229

Query: 56  IPDDL--SDEGKDFIR--LCLQRNPLNRPTAVKLLDHPF 90
            P+D   S +  D I+  LC       R     L  HPF
Sbjct: 230 FPEDPKVSSDFLDLIQSLLC---GQKERLGYEGLCCHPF 265

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 29/124 (23%)

Query: 15  AVDIWSLGCTVLEMATTKPPW------SQYEGVAAMF---------KIGNSKEL------ 53
           A+DIWS+GC   E+ T KP +       Q + +  +          ++ N K        
Sbjct: 188 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSM 247

Query: 54  -PTIPDDLSDE--GKDFIRLC-LQR----NPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
               P   S +    D + L  L+R    +P +RPTA + L  P+ KG A +ER   A  
Sbjct: 248 RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSAQP 307

Query: 106 LSRL 109
           +++L
Sbjct: 308 ITKL 311

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 35/120 (29%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-----------------SQYEGVAAM 44
           APE +         +DIW++GC   E+ +  P +                 +    V   
Sbjct: 166 APECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKK 225

Query: 45  FK--------------IGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           F+               G  K LP    + S EG D ++  L  +P  R TA + L HP+
Sbjct: 226 FRKSRHMNYNFPSKKGTGLRKLLP----NASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ N S    A+D+WS+GC   E+   KP
Sbjct: 176 APELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 22/119 (18%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------ 54
           MAPE+++     + +VD ++LG T+ EM   + P+      A   K+ N KEL       
Sbjct: 164 MAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFR-----ARGEKVEN-KELKQRILND 216

Query: 55  --TIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKGAA--PLERTILAP 104
             T PD  S   K F    L ++P  R          L  HP  +      LE  +L P
Sbjct: 217 SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPP 275

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+ +       A D+WSLG  + E+ T   P+        M ++   K  P  P  +
Sbjct: 238 LAPELWERKRYSKKA-DMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP-FPCPV 295

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
           S   K  +   L +NP  RPT  +LL   F+K  A L + I+
Sbjct: 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVANLFQDIV 337

Length = 478

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 16/103 (15%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ------YEGVAAMFKIGNSKELP 54
           MAPEV+KN      + D W+LGC + EM   + P+ Q       E V  + K    +   
Sbjct: 168 MAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE--- 223

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVK 92
              +  S + +   ++ L ++P  R       A ++ +HP  K
Sbjct: 224 -YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 1   MAPEVI-KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--IGNSKELPTIP 57
           +APE++     G   AVD W+LG  + E  T  PP++  E    +F+  +      P   
Sbjct: 547 LAPELLLGKPHG--PAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILNRDIPWPEGE 603

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           + LS   ++ I + L  +P  R    +L  HP   G
Sbjct: 604 EKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHG 639

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 9/98 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--D 58
           +APEV+  +    L  D WS+G  + EM   +PP+     +    K+ N +    IP   
Sbjct: 215 IAPEVLLRTGYTQLC-DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQA 273

Query: 59  DLSDEGKDFI-RLCLQRNP---LNRPTAVKLLDHPFVK 92
            LS E  D I +LC  R P   L +  A ++  HPF K
Sbjct: 274 KLSPEASDLIIKLC--RGPEDRLGKNGADEIKAHPFFK 309

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 30/119 (25%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS----------- 50
           APE++  +   + A+D+WS+GC   E+ T KP +     +  + KI              
Sbjct: 174 APELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG 233

Query: 51  -KELPTI------------------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             ELP                       LSD G D +   L  +P  R +A   L HP+
Sbjct: 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 29/118 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---------------------SQYEG 40
            PE++  ++     VD+WS+GC + E+   KP +                       + G
Sbjct: 169 PPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPG 228

Query: 41  VAAMFKIGNSKELPTIPDDLSDEGK--------DFIRLCLQRNPLNRPTAVKLLDHPF 90
           V+ +    N K        L +  K        D +   L  +P  R +A + L H +
Sbjct: 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 20/106 (18%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------ 54
           MAPEV++  +  + + D +SLGC + ++     P+ Q+       K  +  E+       
Sbjct: 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH-------KTKDKHEIDRMTLTV 214

Query: 55  --TIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG 93
              +PD  S E K  +   LQR+   R       A ++ +H F KG
Sbjct: 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 44/133 (33%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWS------------QYEGVAAMFKI-G 48
           APE++  +     A+DIW++GC   E+ T +P +             Q + +  +F++ G
Sbjct: 183 APELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG 242

Query: 49  NSKE--LPTI---PD--------------------------DLSDEGKDFIRLCLQRNPL 77
              E   P I   P+                              +G D +R  L+ +P 
Sbjct: 243 TPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPT 302

Query: 78  NRPTAVKLLDHPF 90
            R TA + L+HP+
Sbjct: 303 KRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 26/114 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APEV+  S+     VD+WS+GC   EM   KP +        + KI +   LP       
Sbjct: 175 APEVLLQSTYAT-PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233

Query: 55  --TIPD----------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             T+P                 ++ + G   +   L  NP  R +A + L HPF
Sbjct: 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 28/119 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM----------------- 44
           +P ++ + +    A+D+W+ GC   EM T KP ++    +  M                 
Sbjct: 186 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNE 245

Query: 45  ------FKIGNSKELPTIP-----DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                   + N    P  P       ++ E  DF+   L  NP++R TA + L HP++ 
Sbjct: 246 LLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 26/115 (22%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------PW-SQYEG 40
           APE++  +    + VD+WS+GC   E+    P                    P    + G
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229

Query: 41  VAAM-----FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           V ++     FK      L  I    SD+  D ++  L  NP  R TA + L+HP+
Sbjct: 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA--AMFKIGNSKELPTIPD 58
           M+PE +K+      + D+WS G  + E+AT       Y+G++   + +      L   PD
Sbjct: 188 MSPESLKDGVFTTYS-DVWSFGVVLWEIATLAE--QPYQGMSNEQVLRFVMEGGLLDKPD 244

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
           +  D   + +R+C Q NP  RP+ ++++ 
Sbjct: 245 NCPDMLFELMRMCWQYNPKMRPSFLEIIS 273

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 34/120 (28%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT----------------------KPPWSQYE 39
            P+V+  +   + ++D+WS GC   E+A                         P    + 
Sbjct: 167 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226

Query: 40  GVAAMFKIGNSKELPTIP---------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           GV+   K+ + K  P  P           L+  G+D ++  L  NP+ R +A + L HP+
Sbjct: 227 GVS---KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 36.5 bits (85), Expect = 8e-04
 Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 32/106 (30%)

Query: 15  AVDIWSLGCTVLEMATTKP--------------------P-------WSQYEGVAAMFKI 47
           AVDIW +GC   EM T +P                    P       W    G   +   
Sbjct: 207 AVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSF 266

Query: 48  GNSKELPTIPDDLSDEGKDFIRLC---LQRNPLNRPTAVKLLDHPF 90
            N     T+ +     G + + L    L  +P  R TA   L+HP+
Sbjct: 267 TNYP--RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 17  DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIPDDLSDEGKDFIR--LC 71
           D WSLG  + EM   + P+     V    KI N +E    P+   D+S+E KD I+  +C
Sbjct: 190 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLIC 249

Query: 72  LQRNPLNRPTAVKLLDHPFVKG 93
            +   L +        H F +G
Sbjct: 250 SRERRLGQNGIEDFKKHAFFEG 271

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 14/115 (12%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-SQYEGVA---AMFKIGNSKELPTI 56
           MAPEV+ N     L+ D W LGC + EM   + P+  + E V       ++  ++E    
Sbjct: 168 MAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE--VY 224

Query: 57  PDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKGA--APLERTILAP 104
               S+E K   ++ L ++P  R       A ++  HPF +      LE  +L P
Sbjct: 225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD- 59
           +APEV+       L  D WS+G  + EM   +PP+          K+ N +    IP   
Sbjct: 215 IAPEVLLRKGYTQLC-DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQV 273

Query: 60  -LSDEGKDFIR--LCLQRNPLNRPTAVKLLDHPF 90
            LS E  D I    C     L R  A  +  HPF
Sbjct: 274 KLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK---PPWSQYEGVAAMFKIGNSKELPTIPD 58
           APE++ N    N  VDIWS+GC + E+ T +   P     + +  + ++  +     +  
Sbjct: 185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244

Query: 59  DLSDEGKDFIRLCLQRNPLN--------RPTAVKLLDHPFV 91
             S+  +++I+   Q   +N         P AV LL+   V
Sbjct: 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 285

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+++       +VD WS G  + EM   + P+   +       I    + P  P  +
Sbjct: 163 IAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWI 219

Query: 61  SDEGKDFIRLCLQRNPLNRPTAV-KLLDHPFVKGA--APLERTILAP 104
           + E KD +    +R+P  R   V  +  HPF K      LE+  L P
Sbjct: 220 TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTALEKRELDP 266

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++      ++ VDIWS GC   EM   KP
Sbjct: 173 APEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP 204

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 28/118 (23%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIGNSK------ 51
            APE++  +   +  VD+W++GC   E+    P +   +  E +A +F+   +       
Sbjct: 167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP 226

Query: 52  ELPTIPD-------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            L ++PD                   D S E  D ++  L  +P  R +A + L HP+
Sbjct: 227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--PWSQY-EGVAAMFKIGNSKELPTIPDD 59
           P+++  S+  +  +D+W +GC   EM+T +P  P S   E +  +F+I  +    T P  
Sbjct: 173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232

Query: 60  LSDE 63
           LS+E
Sbjct: 233 LSNE 236

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	109
KOG0610	459	consensus Putative serine/threonine protein kinase	99.9
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.89
KOG0605	550	consensus NDR and related serine/threonine kinases	99.89
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.88
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.88
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.87
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.87
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.87
KOG0578	550	consensus p21-activated serine/threonine protein k	99.86
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.86
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.85
KOG0198	313	consensus MEKK and related serine/threonine protei	99.85
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.84
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.83
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.83
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.83
PTZ00284	467	protein kinase; Provisional	99.83
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.82
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.82
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.82
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.82
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.81
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.81
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.81
PHA02988	283	hypothetical protein; Provisional	99.81
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.81
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.81
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.81
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.81
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.8
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.8
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.8
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.8
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.8
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.8
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.8
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.8
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.8
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.8
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.8
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.8
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.8
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.8
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.79
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.79
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.79
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.79
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.79
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.79
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.79
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.79
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.79
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.79
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.79
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.79
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.79
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.79
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.79
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.79
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.79
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.79
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.79
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.79
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.78
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.78
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.78
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.78
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.78
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.78
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.78
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.78
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.78
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.77
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.77
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.77
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.77
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.77
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.77
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.77
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.77
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.77
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.77
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.77
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.77
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.77
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.77
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.77
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.77
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.77
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.77
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.76
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.76
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.76
PTZ00283	496	serine/threonine protein kinase; Provisional	99.76
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.76
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.76
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.76
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.76
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.76
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.76
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.76
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.76
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.76
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.76
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.76
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.76
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.76
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.76
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.76
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.76
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.76
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.76
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.76
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.76
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.76
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.75
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.75
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.75
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.75
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.75
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.75
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.75
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.75
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.75
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.75
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.75
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.75
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.75
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.75
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.75
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.75
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.75
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.75
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.75
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.75
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.75
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.75
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.75
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.75
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.74
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.74
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.74
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.74
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.74
PTZ00267	478	NIMA-related protein kinase; Provisional	99.74
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.74
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.74
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.74
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.74
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.74
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.74
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.74
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.74
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.74
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.74
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.73
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.73
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.73
PLN00009	294	cyclin-dependent kinase A; Provisional	99.73
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.73
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.73
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.73
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.73
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.73
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.73
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.73
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.73
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.73
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.73
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.73
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.73
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.73
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.73
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.73
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.73
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.73
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.73
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.73
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.73
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.73
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.72
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.72
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.72
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.72
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.72
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.72
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.72
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.72
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.72
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.72
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.72
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.72
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.72
PHA03212	391	serine/threonine kinase US3; Provisional	99.72
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.72
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.72
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.72
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.72
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.72
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.72
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.72
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.72
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.72
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.72
PHA03207	392	serine/threonine kinase US3; Provisional	99.71
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.71
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.71
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.71
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.71
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.71
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.71
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.71
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.71
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.71
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.71
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.71
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.71
PHA03209	357	serine/threonine kinase US3; Provisional	99.71
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.71
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.71
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.71
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.71
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.71
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.71
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.7
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.7
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.7
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.7
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.7
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.7
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.7
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.7
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.69
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.69
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.69
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.69
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.69
PHA03211	461	serine/threonine kinase US3; Provisional	99.69
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.69
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.69
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.68
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.68
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.68
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.68
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.68
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.68
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.68
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.68
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.68
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.68
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.68
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.67
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.67
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.67
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.67
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.67
KOG0589	426	consensus Serine/threonine protein kinase [General	99.67
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.67
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.67
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.67
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.67
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.67
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.67
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.67
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.67
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.66
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.66
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.66
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.66
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.66
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.66
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.66
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.66
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.66
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.66
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.66
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.65
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.65
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.65
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.65
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.65
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.65
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.65
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.65
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.65
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.65
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.65
KOG0584	632	consensus Serine/threonine protein kinase [General	99.65
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.65
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.65
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.65
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.65
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.65
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.64
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.64
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.64
PLN00181	793	protein SPA1-RELATED; Provisional	99.64
PHA03210	501	serine/threonine kinase US3; Provisional	99.64
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.64
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.64
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.64
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.64
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.64
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.64
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.64
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.64
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.63
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.63
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.63
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.63
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.63
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.63
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.63
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.63
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.63
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.62
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.62
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.62
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.62
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.62
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.62
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.62
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.62
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.61
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.61
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.61
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.61
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.61
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.61
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.61
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.6
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.6
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.6
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.6
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.6
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.6
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.6
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.6
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.6
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.59
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.59
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.58
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.58
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.58
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.57
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.57
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.57
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.57
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.57
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.57
PHA02882	294	putative serine/threonine kinase; Provisional	99.57
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.56
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.53
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.53
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.52
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.52
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.52
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.52
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.52
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.51
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.51
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.51
KOG0586	596	consensus Serine/threonine protein kinase [General	99.47
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.47
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.47
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.46
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.46
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.46
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.45
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.44
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.43
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.41
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.41
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.41
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.39
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.28
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.28
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.27
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.2
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.19
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.08
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.03
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.89
KOG1187	361	consensus Serine/threonine protein kinase [Signal	98.89
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.88
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.82
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.79
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.7
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.62
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.52
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.48
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.37
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.35
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.22
KOG3653	534	consensus Transforming growth factor beta/activin	98.07
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.94
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.83
KOG1152	772	consensus Signal transduction serine/threonine kin	97.29
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.2
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.85
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.36
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	93.04
COG4248	637	Uncharacterized protein with protein kinase and he	91.44
cd00059	78	FH Forkhead (FH), also known as a "winged helix".	86.15
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	84.28

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=1.5e-23  Score=127.52  Aligned_cols=106  Identities=28%  Similarity=0.423  Sum_probs=88.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.+ ++.++|+|.||+.+|||++|..||.+.+....+.++.......+-....+..+++||.++|..||++|.
T Consensus       302 lAPEvI~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  302 LAPEVIRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             ccceeeecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence            6999998776 999999999999999999999999999988888887766553333345678899999999999999998


Q ss_pred             c----HHHHhcCcccCCCCCc-cccccccccc
Q 033880           81 T----AVKLLDHPFVKGAAPL-ERTILAPELS  107 (109)
Q Consensus        81 ~----~~~~l~~~~~~~~~~~-~~~~~~~~~~  107 (109)
                      .    +.||.+||||.++... -+...+|.|+
T Consensus       381 g~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP  412 (459)
T KOG0610|consen  381 GSKRGAAEIKRHPFFEGVNWALIRCARPPEIP  412 (459)
T ss_pred             ccccchHHhhcCccccCCChhheeccCCCcCC
Confidence            7    9999999999998654 3335555554

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.6e-23  Score=130.95  Aligned_cols=105  Identities=31%  Similarity=0.463  Sum_probs=88.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+|++||++|+|+.|+.||.+.+..+.+..+.....  .+|..++.++.++|.+++..+|++|.
T Consensus       535 ~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~--~yP~~ls~ea~~il~~ll~k~p~kRL  611 (694)
T KOG0694|consen  535 LAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV--RYPRFLSKEAIAIMRRLLRKNPEKRL  611 (694)
T ss_pred             cChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC--CCCCcccHHHHHHHHHHhccCccccc
Confidence            7999998776 99999999999999999999999999888888877776654  67889999999999999999999998


Q ss_pred             c-----HHHHhcCcccCCCCC---cccccccccccc
Q 033880           81 T-----AVKLLDHPFVKGAAP---LERTILAPELSR  108 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~~~---~~~~~~~~~~~~  108 (109)
                      .     +++|++||||+.+..   ..+...+|++++
T Consensus       612 G~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~  647 (694)
T KOG0694|consen  612 GSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT  647 (694)
T ss_pred             CCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence            4     578999999998743   233355555443

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.89  E-value=5.6e-23  Score=128.03  Aligned_cols=106  Identities=37%  Similarity=0.516  Sum_probs=85.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.+ |+..+|+||+||++|||+.|.+||.+..+......+..+......|  ...+.++++||.+|+. +|++
T Consensus       355 iAPEVll~kg-Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~  432 (550)
T KOG0605|consen  355 IAPEVLLGKG-YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPEN  432 (550)
T ss_pred             cchHHHhcCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHH
Confidence            7999998776 9999999999999999999999999988887777776665433333  4567899999999999 9999


Q ss_pred             CC---cHHHHhcCcccCCCCCcccc-cccccccc
Q 033880           79 RP---TAVKLLDHPFVKGAAPLERT-ILAPELSR  108 (109)
Q Consensus        79 R~---~~~~~l~~~~~~~~~~~~~~-~~~~~~~~  108 (109)
                      |.   +++||.+||||+++....-. ..++++++
T Consensus       433 RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~  466 (550)
T KOG0605|consen  433 RLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVPQ  466 (550)
T ss_pred             hcCcccHHHHhcCCccccCCcchhhcCCCCCCCC
Confidence            97   58999999999998654433 33444443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.7e-22  Score=127.30  Aligned_cols=89  Identities=40%  Similarity=0.721  Sum_probs=80.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++...+ ++..+|+||+||++|.++.|++||......+.+..+.....  .+|...+.++++|+.++|..+|.+||
T Consensus       185 IAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rp  261 (592)
T KOG0575|consen  185 IAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY--SMPSHLSAEAKDLIRKLLRPNPSERP  261 (592)
T ss_pred             cChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc--ccccccCHHHHHHHHHHhcCCcccCC
Confidence            6999997655 99999999999999999999999998877888877777666  45678899999999999999999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      ++++++.|+||.
T Consensus       262 sl~~vL~h~Ff~  273 (592)
T KOG0575|consen  262 SLDEVLDHPFFK  273 (592)
T ss_pred             CHHHHhcCHhhh
Confidence            999999999993

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.88  E-value=2.5e-22  Score=125.51  Aligned_cols=94  Identities=27%  Similarity=0.584  Sum_probs=83.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||++.++. .+..+|+|+|||++|.|+.|.+||.+.+....+..+.....  .++..+++.+.+|+.++|..+|++|+
T Consensus       254 VSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rl  330 (604)
T KOG0592|consen  254 VSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRL  330 (604)
T ss_pred             cCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccc
Confidence            4799997665 88999999999999999999999999888888777766655  56888999999999999999999999


Q ss_pred             cHHHHhcCcccCCCCCc
Q 033880           81 TAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~~   97 (109)
                      +.++|.+||||.++...
T Consensus       331 t~~qIk~HpFF~~Vdw~  347 (604)
T KOG0592|consen  331 TSQQIKAHPFFEGVDWE  347 (604)
T ss_pred             cHHHHhhCcccccCChh
Confidence            99999999999987543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.87  E-value=1.9e-22  Score=121.04  Aligned_cols=97  Identities=33%  Similarity=0.615  Sum_probs=79.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc----hhHHHHHHhhCCCCCCCCCCC-CCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY----EGVAAMFKIGNSKELPTIPDD-LSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~   75 (109)
                      ||||.+.+.. |+.++||||||+++.|+..|+.||...    .....+...+..+..|..|.. +++++++|+..||+.+
T Consensus       244 MsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kd  322 (364)
T KOG0581|consen  244 MSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKD  322 (364)
T ss_pred             cChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            8999997765 999999999999999999999999764    123333344444455667776 9999999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCCCcc
Q 033880           76 PLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      |..|+++.++++|||++......
T Consensus       323 p~~R~s~~qLl~Hpfi~~~~~~~  345 (364)
T KOG0581|consen  323 PSERPSAKQLLQHPFIKKFEDPN  345 (364)
T ss_pred             cccCCCHHHHhcCHHHhhccccc
Confidence            99999999999999998655433

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.87  E-value=6.5e-22  Score=114.36  Aligned_cols=93  Identities=28%  Similarity=0.411  Sum_probs=79.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||+++... |+..+|+|++|+++|-++.|.+||.+......+..+.....  .++.+...++++++|+.+||..+|.+
T Consensus       179 maPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~k  257 (355)
T KOG0033|consen  179 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKK  257 (355)
T ss_pred             cCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhh
Confidence            7999998766 99999999999999999999999998766666666554333  23457788999999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      |+++.++++|||++.-
T Consensus       258 RIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  258 RITADEALKHPWICNR  273 (355)
T ss_pred             hccHHHHhCCchhcch
Confidence            9999999999999864

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=6.3e-22  Score=126.28  Aligned_cols=95  Identities=27%  Similarity=0.509  Sum_probs=83.3

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCc
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT   81 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~   81 (109)
                      +||++.+..+.+.++||||||+++|.+++|..||...+....+.....+..  .+|..++.++.+|+.+|+..||..|++
T Consensus       179 ~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f--~MPs~Is~eaQdLLr~ml~VDp~~RiT  256 (786)
T KOG0588|consen  179 APEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF--EMPSNISSEAQDLLRRMLDVDPSTRIT  256 (786)
T ss_pred             CchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc--cCCCcCCHHHHHHHHHHhccCcccccc
Confidence            799999888889999999999999999999999997776666666666554  678999999999999999999999999


Q ss_pred             HHHHhcCcccCCCCCcc
Q 033880           82 AVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        82 ~~~~l~~~~~~~~~~~~   98 (109)
                      .++|++|||+.+-....
T Consensus       257 ~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  257 TEEILKHPFLSGYTSLP  273 (786)
T ss_pred             HHHHhhCchhhcCCCCC
Confidence            99999999998754443

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4.8e-22  Score=124.42  Aligned_cols=93  Identities=39%  Similarity=0.640  Sum_probs=81.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... |+.++||||||++..||+-|++||-..++..+++.+...+... ..+...+..+++|+.+||..|+.+|
T Consensus       436 MAPEVvtrk~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~R  514 (550)
T KOG0578|consen  436 MAPEVVTRKP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQR  514 (550)
T ss_pred             cchhhhhhcc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcC
Confidence            8999997666 9999999999999999999999999888888887776655432 3467789999999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      +++.++|+|||+...
T Consensus       515 asA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  515 ASAKELLEHPFLKMA  529 (550)
T ss_pred             CCHHHHhcChhhhhc
Confidence            999999999999543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=3.1e-23  Score=126.16  Aligned_cols=95  Identities=35%  Similarity=0.510  Sum_probs=76.9

Q ss_pred             CCCcceecCC--CCCchHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~--~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+.+  .+..++|+||+||++|-+++|.+||.+..... ....+..+..  .+..+...+.+..+|+..||..+
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence            5899998554  35568999999999999999999998765444 3333333332  24567789999999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~   95 (109)
                      |++|++++++|+||||+...
T Consensus       425 P~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccCcCHHHHhcChhhhccc
Confidence            99999999999999999665

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.5e-22  Score=122.19  Aligned_cols=91  Identities=42%  Similarity=0.707  Sum_probs=76.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++++.. |+.++||||||++.++|..|.+|+....+...+.. +.....|.....+++.+++|+..||..+|+.||
T Consensus       178 MAPEVI~~~~-Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-Ipk~~PP~L~~~~S~~~kEFV~~CL~k~P~~Rp  255 (467)
T KOG0201|consen  178 MAPEVIKQSG-YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-IPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRP  255 (467)
T ss_pred             cchhhhcccc-ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-ccCCCCCccccccCHHHHHHHHHHhhcCcccCc
Confidence            8999998544 99999999999999999999999987766444333 333344555567889999999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      ++.++++|.|++.
T Consensus       256 sA~~LLKh~FIk~  268 (467)
T KOG0201|consen  256 SAKELLKHKFIKR  268 (467)
T ss_pred             CHHHHhhhHHHHh
Confidence            9999999999987

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=4.3e-22  Score=119.62  Aligned_cols=96  Identities=56%  Similarity=1.014  Sum_probs=80.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.......+|+||+||++.||++|..||.. .........+......|.+|...+.+.++|+.+|+..+|++|
T Consensus       188 maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~R  267 (313)
T KOG0198|consen  188 MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKR  267 (313)
T ss_pred             cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccC
Confidence            7999997532233599999999999999999999987 444555556665656677888999999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |++++++.|||.+....
T Consensus       268 pta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  268 PTAEELLEHPFLKQNSI  284 (313)
T ss_pred             cCHHHHhhChhhhcccc
Confidence            99999999999987654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.84  E-value=8.5e-21  Score=113.92  Aligned_cols=94  Identities=39%  Similarity=0.589  Sum_probs=79.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.... |+..+|+||+|+++|+|++|.+||.+.+.......+.... .+..+...+.+.++++++++..+|++|.
T Consensus       192 mAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  192 MAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             cChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            8999998776 9999999999999999999999999877666665555544 2333555899999999999999999995


Q ss_pred             ----cHHHHhcCcccCCCCC
Q 033880           81 ----TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 ----~~~~~l~~~~~~~~~~   96 (109)
                          ++.++.+||||.++..
T Consensus       270 g~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  270 GGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             CCCCChHHhhcCcccccCCH
Confidence                6888999999998743

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=9.6e-21  Score=117.73  Aligned_cols=84  Identities=25%  Similarity=0.486  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      .|||.+..+. |+.++|+||||++++|+++ |+.||.+....+....+..+...+ .|..++..++++|..||..+|++|
T Consensus       371 tAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp-~P~~CP~~vY~lM~~CW~~~P~~R  448 (468)
T KOG0197|consen  371 TAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP-RPEGCPDEVYELMKSCWHEDPEDR  448 (468)
T ss_pred             cCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC-CCCCCCHHHHHHHHHHhhCCcccC
Confidence            4899997665 9999999999999999999 999999888888777777776655 489999999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |+|+.+.
T Consensus       449 PtF~~L~  455 (468)
T KOG0197|consen  449 PTFETLR  455 (468)
T ss_pred             CCHHHHH
Confidence            9999764

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=2.1e-20  Score=117.86  Aligned_cols=95  Identities=28%  Similarity=0.552  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC------------------CC--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------------------LP--------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------~~--------   54 (109)
                      ||||++.+...++.++|+||+||++|+|++|.+||.+.........+.....                  .+        
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  316 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK  316 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHH
Confidence            6899886655589999999999999999999999987654433332211000                  00        


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                       .++...+.++.+|+.+||..+|.+|+++.++++||||....
T Consensus       317 ~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence             12334577899999999999999999999999999997643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.83  E-value=1.8e-20  Score=110.43  Aligned_cols=93  Identities=31%  Similarity=0.500  Sum_probs=81.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||.+...+ |+.++|+|++|+++|||+.|.+||...+....+..+.....  .+|..++.++++|++.+++.|-++|.
T Consensus       208 LAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  208 LAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             cChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhhh
Confidence            6899886655 99999999999999999999999998888777777777665  56889999999999999999999993


Q ss_pred             -----cHHHHhcCcccCCCCC
Q 033880           81 -----TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~~   96 (109)
                           ...++..|+||+++..
T Consensus       285 gnlknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  285 GNLKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             cCcCCCccccccCcccccccH
Confidence                 5778999999998643

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=9.8e-20  Score=107.67  Aligned_cols=90  Identities=43%  Similarity=0.852  Sum_probs=74.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...+..............+..+...+..+.+++.+||..+|.+||
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (263)
T cd06625         174 MSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRP  252 (263)
T ss_pred             cCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCC
Confidence            5899887655 889999999999999999999999765554444444444344455677889999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|+||
T Consensus       253 t~~~ll~~~~~  263 (263)
T cd06625         253 SAEELLRHFFV  263 (263)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PTZ00284 protein kinase; Provisional

Probab=99.83  E-value=2.4e-20  Score=118.31  Aligned_cols=97  Identities=24%  Similarity=0.334  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-C------------------------CC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-L------------------------PT   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~------------------------~~   55 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|+.||.+......+..+..... .                        +.
T Consensus       312 ~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  390 (467)
T PTZ00284        312 RSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC  390 (467)
T ss_pred             cCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccccc
Confidence            6899987655 89999999999999999999999976554332221110000 0                        00


Q ss_pred             C---------------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           56 I---------------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        56 ~---------------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      .               .......+.+|+.+||.+||++|++++++++||||.......
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~  448 (467)
T PTZ00284        391 TDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEC  448 (467)
T ss_pred             CCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCcc
Confidence            0               001134567999999999999999999999999998754433

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.82  E-value=6e-21  Score=120.94  Aligned_cols=90  Identities=33%  Similarity=0.603  Sum_probs=75.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++++.. ++.|+|||||||++|||++|..||...+...+.+-........++|..++.-++-|+++||.-.|..||
T Consensus       278 MAPEvIrneP-csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRP  356 (904)
T KOG4721|consen  278 MAPEVIRNEP-CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRP  356 (904)
T ss_pred             hCHHHhhcCC-cccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCc
Confidence            8999998877 999999999999999999999999876654444444444444567888999999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      +|++++.|-=+
T Consensus       357 SFrqil~HldI  367 (904)
T KOG4721|consen  357 SFRQILLHLDI  367 (904)
T ss_pred             cHHHHHHHHhh
Confidence            99999988433

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=6.4e-20  Score=113.21  Aligned_cols=91  Identities=29%  Similarity=0.465  Sum_probs=77.1

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCC-CHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL-SDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. +.+.++|+||+|+++|.|++|..||...+.......+.....  .+|..+ +.++..|+.+|+..+|..
T Consensus       188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~  265 (370)
T KOG0583|consen  188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF--KIPSYLLSPEARSLIEKMLVPDPST  265 (370)
T ss_pred             CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc--cCCCCcCCHHHHHHHHHHcCCCccc
Confidence            6899998766 567899999999999999999999988665555555444433  456666 999999999999999999


Q ss_pred             CCcHHHHhcCcccCC
Q 033880           79 RPTAVKLLDHPFVKG   93 (109)
Q Consensus        79 R~~~~~~l~~~~~~~   93 (109)
                      |+++.+++.|+||+.
T Consensus       266 R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  266 RITLLEILEHPWFQK  280 (370)
T ss_pred             CCCHHHHhhChhhcc
Confidence            999999999999997

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.82  E-value=6.7e-20  Score=109.70  Aligned_cols=90  Identities=27%  Similarity=0.469  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC--------------------CCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--------------------KELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~-----   55 (109)
                      +|||++.+.. ++.++|+||+||++|++++|+.||.+.........+...                    ...+.     
T Consensus       168 ~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07848         168 RSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ  246 (287)
T ss_pred             CCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence            5899886655 889999999999999999999999765433322211110                    00000     


Q ss_pred             -----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 -----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                           .....+..+.+++.+||..+|++|++++++++||||
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                 011256779999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=7.4e-20  Score=109.94  Aligned_cols=91  Identities=32%  Similarity=0.421  Sum_probs=74.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+|+
T Consensus       165 ~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~  241 (291)
T cd05612         165 LAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRL  241 (291)
T ss_pred             cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHcc
Confidence            5899886554 88999999999999999999999987665544444433322  34566788999999999999999999


Q ss_pred             c-----HHHHhcCcccCCC
Q 033880           81 T-----AVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~   94 (109)
                      +     ++++++|+||...
T Consensus       242 ~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         242 GNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             CCccCCHHHHhcCccccCC
Confidence            5     9999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.82  E-value=2.6e-20  Score=104.64  Aligned_cols=91  Identities=32%  Similarity=0.434  Sum_probs=65.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH-HHhhCCCCC--C---CCCCCCCH--HHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKIGNSKEL--P---TIPDDLSD--EGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~--~---~~~~~~~~--~~~~l~~~~l   72 (109)
                      ||||++.+.. ++.++||||+||++|++++|..||......... .........  +   ..+.....  .+.+++.+||
T Consensus        71 ~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl  149 (176)
T smart00750       71 MAPEVIQGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA  149 (176)
T ss_pred             cChHHhcCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence            7999997655 889999999999999999999999654332221 111111110  0   01111222  5889999999


Q ss_pred             hhCCCCCCcHHHHhcCcccC
Q 033880           73 QRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~~~~~~   92 (109)
                      ..+|++||++.++++|+|..
T Consensus       150 ~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      150 SRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             hcccccccCHHHHHHHHHHH
Confidence            99999999999999998864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=4.9e-20  Score=119.76  Aligned_cols=84  Identities=23%  Similarity=0.402  Sum_probs=73.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      |+||.+.... |+.++||||+||++||+++ |..||.+....+....+..+.. ...|..++.++++||..||+.+|++|
T Consensus       672 MppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~R  749 (774)
T KOG1026|consen  672 MPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRR  749 (774)
T ss_pred             CCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccC
Confidence            8999997665 9999999999999999999 9999988877766655554444 56799999999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |+|+||-
T Consensus       750 PsF~eI~  756 (774)
T KOG1026|consen  750 PSFKEIH  756 (774)
T ss_pred             CCHHHHH
Confidence            9999984

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.81  E-value=3.8e-20  Score=112.65  Aligned_cols=91  Identities=27%  Similarity=0.458  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||...+.......+....  ...+...+..+.+++.+||..+|++|+
T Consensus       162 ~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05571         162 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             cChhhhcCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            6899986654 8999999999999999999999997665444433333332  244667889999999999999999999


Q ss_pred             -----cHHHHhcCcccCCC
Q 033880           81 -----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~   94 (109)
                           ++.++++|+||...
T Consensus       239 ~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         239 GGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCC
Confidence                 89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=1.4e-19  Score=108.62  Aligned_cols=91  Identities=24%  Similarity=0.420  Sum_probs=68.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--------------------CCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--------------------LPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~~-----   55 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+.........+.....                    .+.     
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQP  249 (288)
T ss_pred             cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCc
Confidence            6899886555588999999999999999999999977654433322111000                    000     


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                         .....+.+..+++.+|+..+|.+|++++++++||||
T Consensus       250 ~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         250 LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence               012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.81  E-value=1.4e-19  Score=107.40  Aligned_cols=90  Identities=46%  Similarity=0.922  Sum_probs=70.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||..................+..+...+..+.+++ .||..+|++||
T Consensus       176 ~aPE~~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp  253 (266)
T cd06651         176 MSPEVISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRP  253 (266)
T ss_pred             cCHHHhCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCc
Confidence            5788876544 788999999999999999999999866544444444443333445566778888888 57778999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      +++++++||||+
T Consensus       254 ~~~eil~hp~~~  265 (266)
T cd06651         254 SAEELLRHPFAQ  265 (266)
T ss_pred             CHHHHhcCcccc
Confidence            999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.81  E-value=6.7e-20  Score=111.85  Aligned_cols=91  Identities=26%  Similarity=0.470  Sum_probs=74.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+....  ...+...+..+++++.+||..+|++|+
T Consensus       182 ~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~  258 (329)
T PTZ00263        182 LAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--LKFPNWFDGRARDLVKGLLQTDHTKRL  258 (329)
T ss_pred             cCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--cCCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence            6899887655 8899999999999999999999998765554444443332  244666788999999999999999998


Q ss_pred             c-----HHHHhcCcccCCC
Q 033880           81 T-----AVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~   94 (109)
                      +     +++++.||||...
T Consensus       259 ~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        259 GTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCCCCHHHHhcCCccCCC
Confidence            6     7999999999874

>PHA02988 hypothetical protein; Provisional

Probab=99.81  E-value=1.7e-19  Score=108.07  Aligned_cols=87  Identities=23%  Similarity=0.321  Sum_probs=69.3

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+. ..++.++|+||+|+++|++++|..||.+................+..+...+..+.+++.+||+.+|++|
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  266 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKR  266 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccC
Confidence            589988641 3489999999999999999999999987765555444433333344555678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       267 ps~~ell~  274 (283)
T PHA02988        267 PNIKEILY  274 (283)
T ss_pred             cCHHHHHH
Confidence            99999875

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.81  E-value=1.1e-19  Score=110.51  Aligned_cols=91  Identities=26%  Similarity=0.452  Sum_probs=74.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+.++.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         163 IAPEILQEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--VYPTWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cCHHHHcCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            6899886554 88999999999999999999999987665554444443322  34566789999999999999999999


Q ss_pred             cH------HHHhcCcccCCC
Q 033880           81 TA------VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~------~~~l~~~~~~~~   94 (109)
                      ++      +++++|+||...
T Consensus       240 ~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         240 GSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            98      899999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.81  E-value=2.8e-19  Score=106.20  Aligned_cols=91  Identities=36%  Similarity=0.622  Sum_probs=69.0

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++..    ...++.++|+||+|++++++++|..||.........................+..+.+++.+||..+|
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  257 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNH  257 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCCh
Confidence            57888752    22478899999999999999999999976544443333322222222234567899999999999999


Q ss_pred             CCCCcHHHHhcCccc
Q 033880           77 LNRPTAVKLLDHPFV   91 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~   91 (109)
                      .+||++.++++||||
T Consensus       258 ~~Rpt~~~il~~~~~  272 (272)
T cd06637         258 SQRPTTEQLMKHPFI  272 (272)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.1e-19  Score=107.78  Aligned_cols=99  Identities=31%  Similarity=0.433  Sum_probs=76.4

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC------------------------CCCCCCC-
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------------------SKELPTI-   56 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~------------------------~~~~~~~-   56 (109)
                      |||.+.....|+...|+||+||++.||++|++.|.|.+..+++..+..                        ....++. 
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            789887666799999999999999999999999988765554433311                        1111111 


Q ss_pred             ----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcccc
Q 033880           57 ----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        57 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                          -+..++.+.+|+.+||..||.+|++++++++|||+..-...+..
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE  322 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE  322 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC
Confidence                13467889999999999999999999999999999875544444

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.81  E-value=1.1e-19  Score=108.97  Aligned_cols=90  Identities=38%  Similarity=0.612  Sum_probs=67.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-------------------------C
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-------------------------T   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~   55 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+......+                         .
T Consensus       176 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T cd07862         176 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  254 (290)
T ss_pred             cChHHHhCCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHH
Confidence            5899886554 8889999999999999999999998765443333221110000                         0


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      .....+....+++.+||..+|++||++.++++||||
T Consensus       255 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         255 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            112456778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.80  E-value=2.3e-19  Score=109.24  Aligned_cols=91  Identities=32%  Similarity=0.487  Sum_probs=74.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+|+
T Consensus       168 ~aPE~~~~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  244 (324)
T cd05589         168 LAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--RYPRFLSREAISIMRRLLRRNPERRL  244 (324)
T ss_pred             cCHhHhcCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHhHcC
Confidence            6899886654 88999999999999999999999987665554444433322  34667889999999999999999999


Q ss_pred             -----cHHHHhcCcccCCC
Q 033880           81 -----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~   94 (109)
                           ++.++++|+||+..
T Consensus       245 ~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         245 GSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CCCCCCHHHHhhCCCcCCC
Confidence                 68999999999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.80  E-value=1.8e-19  Score=108.70  Aligned_cols=96  Identities=24%  Similarity=0.440  Sum_probs=68.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHhhC---CCC---------CCC---------CC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGN---SKE---------LPT---------IP-   57 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~---~~~---------~~~---------~~-   57 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+...... ...+..   ...         .+.         .+ 
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK  249 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence            6899886555588899999999999999999999976533211 111100   000         000         00 


Q ss_pred             --------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           58 --------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        58 --------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                              ...+..+.+++.+|++.+|++|++++++++||||+...+
T Consensus       250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence                    113457889999999999999999999999999987654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.80  E-value=1.7e-19  Score=110.14  Aligned_cols=99  Identities=31%  Similarity=0.431  Sum_probs=69.8

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh--------------------------CCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG--------------------------NSKEL   53 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~--------------------------~~~~~   53 (109)
                      +|||++.+. ..++.++|+||+||++|++++|..||.+.........+.                          .....
T Consensus       173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  252 (338)
T cd07859         173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP  252 (338)
T ss_pred             CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCC
Confidence            589987542 347889999999999999999999997654322111000                          00000


Q ss_pred             CC---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           54 PT---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        54 ~~---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                      ..   .....+..+.+++.+||..+|++||+++++++||||.+.....+
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~  301 (338)
T cd07859         253 VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVER  301 (338)
T ss_pred             CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcccc
Confidence            00   01235677889999999999999999999999999987655443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.80  E-value=1.9e-19  Score=109.36  Aligned_cols=91  Identities=27%  Similarity=0.461  Sum_probs=74.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         163 IAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcC
Confidence            5899886655 88999999999999999999999987655444444333322  34567789999999999999999999


Q ss_pred             cH-----HHHhcCcccCCC
Q 033880           81 TA-----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~-----~~~l~~~~~~~~   94 (109)
                      ++     .++++|+||+..
T Consensus       240 s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         240 GCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            99     999999999875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.80  E-value=2.9e-19  Score=109.86  Aligned_cols=87  Identities=23%  Similarity=0.416  Sum_probs=74.5

Q ss_pred             CCCcceec-CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~-~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+ ...|+.++|+||||+++||+++|..||.+................+..+..++..+..+|..||..+|..|
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~R  290 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRR  290 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcC
Confidence            89999984 24599999999999999999999999998877555555655656667788899999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.+++.
T Consensus       291 P~f~ei~~  298 (362)
T KOG0192|consen  291 PSFLEIVS  298 (362)
T ss_pred             CCHHHHHH
Confidence            99999753

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.1e-19  Score=121.31  Aligned_cols=85  Identities=19%  Similarity=0.447  Sum_probs=74.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||.+.... |+.|+|+|||||++||+++ |..||.+....+.+.....+..+ ..|..++..++++|..||..+|++|
T Consensus       871 m~PEsl~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL-~~P~~CP~~ly~lM~~CW~~~pe~R  948 (1025)
T KOG1095|consen  871 MPPESLKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL-DPPSYCPEKLYQLMLQCWKHDPEDR  948 (1025)
T ss_pred             CCHHHHhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc-CCCCCCChHHHHHHHHHccCChhhC
Confidence            8999998755 9999999999999999999 99999998887777655555543 4588999999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+|..++.
T Consensus       949 P~F~~i~~  956 (1025)
T KOG1095|consen  949 PSFRTIVE  956 (1025)
T ss_pred             ccHHHHHh
Confidence            99999875

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.80  E-value=4.8e-19  Score=108.17  Aligned_cols=94  Identities=23%  Similarity=0.473  Sum_probs=68.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---------------------------------   47 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---------------------------------   47 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||............                                 
T Consensus       169 ~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (331)
T cd06649         169 MSPERLQGTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDS  247 (331)
T ss_pred             CCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccccccc
Confidence            5899886654 889999999999999999999999654322111000                                 


Q ss_pred             ------------hCCCCCCCC-CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           48 ------------GNSKELPTI-PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        48 ------------~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                                  ......+.. ....+.++.+|+.+||..+|++||+++++++|+|++...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         248 RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             ccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                        000000111 123567899999999999999999999999999998643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.80  E-value=3.4e-19  Score=106.44  Aligned_cols=91  Identities=40%  Similarity=0.628  Sum_probs=67.8

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++..    ...++.++|+||+|+++|++++|..||.........................+..+.+++.+||..+|
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNY  267 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCCh
Confidence            57887742    22377899999999999999999999965543333332222221112233567899999999999999


Q ss_pred             CCCCcHHHHhcCccc
Q 033880           77 LNRPTAVKLLDHPFV   91 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~   91 (109)
                      .+||++.++++|+||
T Consensus       268 ~~Rp~~~ell~~~~~  282 (282)
T cd06636         268 LSRPSTEQLLKHPFI  282 (282)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=1.4e-19  Score=113.93  Aligned_cols=93  Identities=31%  Similarity=0.529  Sum_probs=68.4

Q ss_pred             CCCcceecCC----------CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCH-HHHHHH
Q 033880            1 MAPEVIKNSS----------GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSD-EGKDFI   68 (109)
Q Consensus         1 ~apE~~~~~~----------~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~   68 (109)
                      |+||.+....          ..++++|+|||||++|+|++|+.||......-+-...+..... -.++..... ++.++|
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~m  607 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVM  607 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHH
Confidence            7888775211          2678999999999999999999999876533333333322221 123333333 388999


Q ss_pred             HHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           69 RLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        69 ~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                      +.||..||++|+++.++|+|||...
T Consensus       608 K~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  608 KCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHhcCcccCCCcHHHhcCccccc
Confidence            9999999999999999999999886

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=1.5e-19  Score=108.34  Aligned_cols=92  Identities=28%  Similarity=0.529  Sum_probs=71.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.....   ........ .....+...+..+.+|+.+||..+|+
T Consensus       168 ~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~P~  245 (285)
T cd05631         168 MAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDAKSICRMLLTKNPK  245 (285)
T ss_pred             cCHhhhcCCC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHHhhcCHH
Confidence            6899987654 8999999999999999999999997643221   11111111 11234566789999999999999999


Q ss_pred             CCCc-----HHHHhcCcccCCC
Q 033880           78 NRPT-----AVKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~~-----~~~~l~~~~~~~~   94 (109)
                      +|++     ++++++||||.+.
T Consensus       246 ~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         246 ERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HhcCCCCCCHHHHhcCHhhcCC
Confidence            9996     8999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.6e-19  Score=111.19  Aligned_cols=96  Identities=35%  Similarity=0.603  Sum_probs=75.5

Q ss_pred             CCCccee-cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------CCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIK-NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------IPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~-~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~   71 (109)
                      ||||++. +..+|+.|+||||||++.+|+.+|..||....+...+.....+.....        ....++..++.++..|
T Consensus       197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~C  276 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALC  276 (516)
T ss_pred             cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHH
Confidence            7999965 334699999999999999999999999988777666554443322100        0123567789999999


Q ss_pred             hhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           72 LQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      +..||++||+++++++|+||+....
T Consensus       277 L~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  277 LVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             hhcCcccCCCHHHHhccHHHhhccc
Confidence            9999999999999999999987543

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.80  E-value=7.9e-19  Score=104.01  Aligned_cols=90  Identities=49%  Similarity=0.878  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC-CCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-KELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||...+........... ...+..+...+..+.+++.+||..+|++|
T Consensus       175 ~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  253 (265)
T cd06631         175 MAPEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHER  253 (265)
T ss_pred             cChhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccC
Confidence            4788876544 789999999999999999999999765544433333222 22344566788999999999999999999


Q ss_pred             CcHHHHhcCccc
Q 033880           80 PTAVKLLDHPFV   91 (109)
Q Consensus        80 ~~~~~~l~~~~~   91 (109)
                      |++.++++||||
T Consensus       254 p~~~~~l~~~~~  265 (265)
T cd06631         254 PSALQLLRHDFL  265 (265)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.80  E-value=4.2e-19  Score=107.41  Aligned_cols=99  Identities=22%  Similarity=0.401  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC--------------------CCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--------------------ELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--------------------~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+....                    ..+.     
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQP  250 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCc
Confidence            579987655558899999999999999999999997654332222111000                    0000     


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                         .....+.+..+++.+|+..+|.+|+++.++++|+||+.......
T Consensus       251 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~  297 (309)
T cd07872         251 LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIH  297 (309)
T ss_pred             hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccccc
Confidence               01235778899999999999999999999999999997654433

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.80  E-value=3.8e-19  Score=108.31  Aligned_cols=92  Identities=27%  Similarity=0.441  Sum_probs=74.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||...........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       162 ~aPE~~~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         162 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             CCcccccCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHccCCHHHhC
Confidence            6899986654 88999999999999999999999976654444333332222  34667889999999999999999998


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           ++.++++|+||.+..
T Consensus       239 ~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         239 GGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCCC
Confidence                 899999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=7e-19  Score=104.72  Aligned_cols=94  Identities=43%  Similarity=0.753  Sum_probs=72.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCC-CCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD-LSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+|++|+++|++++|..||...+.......+... ..+..+.. .+..+.+++.+||..+|++|
T Consensus       165 ~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~p~~R  242 (274)
T cd06609         165 MAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKFSKPFKDFVSLCLNKDPKER  242 (274)
T ss_pred             cChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccccCHHHHHHHHHHhhCChhhC
Confidence            5789886555 889999999999999999999999765543333332222 22233333 67889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |+++++++|+|+.....
T Consensus       243 pt~~~il~~~~~~~~~~  259 (274)
T cd06609         243 PSAKELLKHKFIKKAKK  259 (274)
T ss_pred             cCHHHHhhChhhcCCCc
Confidence            99999999999987544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.6e-19  Score=107.08  Aligned_cols=94  Identities=29%  Similarity=0.444  Sum_probs=73.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+......+..+.............+..+.+++.+||..+|+.|+
T Consensus       199 ~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  277 (316)
T cd05574         199 IAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRL  277 (316)
T ss_pred             cCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCC
Confidence            5788876544 788999999999999999999999876655555444433222121223688999999999999999999


Q ss_pred             c----HHHHhcCcccCCCC
Q 033880           81 T----AVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~----~~~~l~~~~~~~~~   95 (109)
                      +    +++++.|+||++..
T Consensus       278 s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         278 GSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             CchhhHHHHHcCchhhcCC
Confidence            9    99999999998753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.80  E-value=3.7e-19  Score=108.11  Aligned_cols=92  Identities=27%  Similarity=0.467  Sum_probs=73.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+....  +..+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         163 IAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--PCYPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             cCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHHHHHhccCHhhcC
Confidence            6899886654 8999999999999999999999998765544443333222  234556788999999999999999999


Q ss_pred             cHH-HHhcCcccCCCC
Q 033880           81 TAV-KLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~-~~l~~~~~~~~~   95 (109)
                      ++. ++++||||+...
T Consensus       240 ~~~~~l~~h~~~~~~~  255 (316)
T cd05619         240 GVKGDIRQHPFFREID  255 (316)
T ss_pred             CChHHHHcCcccCCCC
Confidence            996 899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.79  E-value=3.2e-19  Score=108.37  Aligned_cols=91  Identities=26%  Similarity=0.482  Sum_probs=73.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+...  .+..+...+.++++++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         163 IAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPHYPRWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             cCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            5899886655 889999999999999999999999876554444333322  2344666889999999999999999999


Q ss_pred             cH-HHHhcCcccCCC
Q 033880           81 TA-VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~-~~~l~~~~~~~~   94 (109)
                      ++ +++++|+||...
T Consensus       240 ~~~~~~~~h~~f~~~  254 (316)
T cd05620         240 GVVGNIRGHPFFKTI  254 (316)
T ss_pred             CChHHHHcCCCcCCC
Confidence            97 578899999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.79  E-value=7e-19  Score=104.28  Aligned_cols=89  Identities=46%  Similarity=0.823  Sum_probs=71.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||.+.+.. ++.++|+|++|++++++++|..||............... ..+..+...+..+.+++.+||..+|.+||
T Consensus       179 ~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (267)
T cd06628         179 MAPEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN-ASPEIPSNISSEAIDFLEKTFEIDHNKRP  256 (267)
T ss_pred             cChhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-CCCcCCcccCHHHHHHHHHHccCCchhCc
Confidence            4788775544 788999999999999999999999876544444333332 23345667889999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|+||
T Consensus       257 ~~~~il~~~~~  267 (267)
T cd06628         257 TAAELLKHPFL  267 (267)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.9e-19  Score=109.10  Aligned_cols=91  Identities=31%  Similarity=0.483  Sum_probs=74.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+....  ...+...+..+.+++.+||..+|++|+
T Consensus       160 ~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~R~  236 (312)
T cd05585         160 LAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP--LRFPDGFDRDAKDLLIGLLSRDPTRRL  236 (312)
T ss_pred             CCHHHHcCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC--CCCCCcCCHHHHHHHHHHcCCCHHHcC
Confidence            6899886654 8899999999999999999999998765544444433332  245667889999999999999999997


Q ss_pred             ---cHHHHhcCcccCCC
Q 033880           81 ---TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ---~~~~~l~~~~~~~~   94 (109)
                         ++.+++.||||...
T Consensus       237 ~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         237 GYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCCHHHHHcCCCcCCC
Confidence               57899999999875

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=3.1e-19  Score=106.36  Aligned_cols=101  Identities=38%  Similarity=0.618  Sum_probs=75.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCC-CCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+...++.++|+|++|+++|++++|..||.+............. ..+..+. ..+..+.+++.+||..+|++|
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  246 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKER  246 (277)
T ss_pred             eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccC
Confidence            47888765445788999999999999999999999766544333222221 1222222 367889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcccccc
Q 033880           80 PTAVKLLDHPFVKGAAPLERTIL  102 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~  102 (109)
                      |++.+++.|+|++..........
T Consensus       247 ~~~~~il~~~~~~~~~~~~~~~~  269 (277)
T cd06917         247 LSAEELLKSKWIKAHSKTPVSIL  269 (277)
T ss_pred             cCHHHHhhChHhhccccCchhhH
Confidence            99999999999987665444433

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=5.7e-19  Score=109.40  Aligned_cols=96  Identities=29%  Similarity=0.521  Sum_probs=78.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------------------------   55 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (109)
                      |||++.....|+.+.|+|++||+++|+.+-++.|.|.+..+++..++.....|.                          
T Consensus       177 APEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l  256 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPL  256 (538)
T ss_pred             chHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCCh
Confidence            899998888899999999999999999999999999888888776643222111                          


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                        +-...+.++.+++.+|+.+||.+||++.++++||||+.....
T Consensus       257 ~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  257 KDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS  300 (538)
T ss_pred             HHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence              112367788999999999999999999999999999865444

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.79  E-value=2e-19  Score=110.25  Aligned_cols=92  Identities=25%  Similarity=0.385  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.........+.....  ..+...+..+.+++.+|+..+|++|+
T Consensus       195 ~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        195 IAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--YFPKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             cCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHcccCHHHcC
Confidence            6899986554 88999999999999999999999987655444444443332  34667788999999999999999995


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++||||+...
T Consensus       272 ~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        272 GNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             CCCCCCHHHHHcCCCcCCCC
Confidence                 899999999998753

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.79  E-value=8.4e-19  Score=108.07  Aligned_cols=92  Identities=24%  Similarity=0.386  Sum_probs=67.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-----------------------CCCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-----------------------SKELP---   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~---   54 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.+..........                       ....+   
T Consensus       189 ~aPE~~~~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (359)
T cd07876         189 RAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGIS  267 (359)
T ss_pred             CCchhccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcc
Confidence            6899986655 88999999999999999999999976543322211100                       00000   


Q ss_pred             --------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           55 --------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        55 --------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                                    ......+..+.+|+.+||..+|++||++.++++|||+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         268 FEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             hhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                          001123567899999999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.79  E-value=4.6e-19  Score=109.71  Aligned_cols=94  Identities=26%  Similarity=0.434  Sum_probs=70.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-----------------------CCCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-----------------------SKELP---   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~---   54 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+.........+..                       ....+   
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSL  250 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCch
Confidence            5789886655578999999999999999999999976544332221110                       00000   


Q ss_pred             ----CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           55 ----TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        55 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                          ......+..+.+++.+||..+|++||++.++++|+||.+.
T Consensus       251 ~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         251 PVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence                1123357788999999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.79  E-value=1.4e-18  Score=106.85  Aligned_cols=97  Identities=36%  Similarity=0.532  Sum_probs=71.0

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++..    ....+.++|+||+||++|++++|..||.....  .............+..+...+..+.+++.+||..
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  314 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQR  314 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccC
Confidence            58998742    12245689999999999999999999963321  1111111112222344567788999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCCCc
Q 033880           75 NPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      +|++||++.++++|+||.+....
T Consensus       315 ~P~~Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        315 EPAKRWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             ChhhCcCHHHHhcCcccccCCcc
Confidence            99999999999999999986444

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.79  E-value=2.9e-19  Score=109.01  Aligned_cols=91  Identities=27%  Similarity=0.463  Sum_probs=73.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||...........+....  ...+...+.++.+++.+||..+|++|+
T Consensus       162 ~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         162 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--IKFPRTLSADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             cChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC--ccCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence            6899886554 8899999999999999999999997655444433332222  245667889999999999999999997


Q ss_pred             -----cHHHHhcCcccCCC
Q 033880           81 -----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~   94 (109)
                           ++.++++|+||.+.
T Consensus       239 ~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         239 GGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.79  E-value=2.7e-19  Score=108.85  Aligned_cols=91  Identities=26%  Similarity=0.439  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         163 IAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV--LYPVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cCHHHHcCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhccCHHHcC
Confidence            6899886554 88999999999999999999999987765555544444332  34556789999999999999999999


Q ss_pred             -------cHHHHhcCcccCCC
Q 033880           81 -------TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -------~~~~~l~~~~~~~~   94 (109)
                             +++++++||||...
T Consensus       240 ~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         240 GCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCCCCHHHHhcCCccCCC
Confidence                   89999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.79  E-value=4.5e-19  Score=106.16  Aligned_cols=90  Identities=30%  Similarity=0.512  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-----------------CC--------C
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-----------------LP--------T   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~--------~   55 (109)
                      +|||++.+.. ++.++|+||+||++|++++|.++|.+.........+.....                 ..        .
T Consensus       174 ~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07863         174 RAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQS  252 (288)
T ss_pred             cCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHH
Confidence            5899886554 89999999999999999999999876544333222111000                 00        0


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      .....+....+++.+|+..+|++||++.+++.||||
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         253 VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            112456778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.79  E-value=6.9e-19  Score=107.18  Aligned_cols=91  Identities=24%  Similarity=0.443  Sum_probs=74.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+....  ...+...+..+.+++.+||..+|.+|+
T Consensus       168 ~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~  244 (324)
T cd05587         168 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPKSLSKEAVSICKGLLTKHPAKRL  244 (324)
T ss_pred             cChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence            5899886655 8899999999999999999999998766555444443332  244667889999999999999999999


Q ss_pred             cH-----HHHhcCcccCCC
Q 033880           81 TA-----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~-----~~~l~~~~~~~~   94 (109)
                      +.     +++++||||...
T Consensus       245 ~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         245 GCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            76     799999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.79  E-value=1.3e-18  Score=102.52  Aligned_cols=89  Identities=34%  Similarity=0.672  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||...+........... ..+..+...+..+.+++.+||..+|++||
T Consensus       169 ~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd08223         169 MSPELFSNKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG-KLPPMPKDYSPELGELIATMLSKRPEKRP  246 (257)
T ss_pred             cChhHhcCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHhccCcccCC
Confidence            5899886544 788999999999999999999999765544433333322 23344566788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++||||
T Consensus       247 ~~~~~l~~~~~  257 (257)
T cd08223         247 SVKSILRQPYI  257 (257)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.79  E-value=4.3e-19  Score=108.04  Aligned_cols=91  Identities=35%  Similarity=0.589  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...+.......+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       167 ~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  243 (323)
T cd05584         167 MAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL--NLPPYLTPEARDLLKKLLKRNPSSRL  243 (323)
T ss_pred             cChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHcccCHhHcC
Confidence            6899886654 78899999999999999999999987665554444443322  44667889999999999999999999


Q ss_pred             -----cHHHHhcCcccCCC
Q 033880           81 -----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~   94 (109)
                           ++++++.|+||+..
T Consensus       244 ~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         244 GAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.79  E-value=5.7e-19  Score=107.63  Aligned_cols=95  Identities=31%  Similarity=0.517  Sum_probs=67.9

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------------------------
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------------------------   53 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------   53 (109)
                      +|||++.+. ..++.++|+||+||+++++++|..||..................                          
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGL  254 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCC
Confidence            589988643 34889999999999999999999999754332222111110000                          


Q ss_pred             ------------------CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           54 ------------------PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        54 ------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                                        .......+..+.+++.+||..+|++||+++++++||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence                              001112356788999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.79  E-value=5.6e-19  Score=112.18  Aligned_cols=88  Identities=30%  Similarity=0.408  Sum_probs=71.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      .|||++... .|+..+|+||+|+++|+|++|..||............+..   +......+..+++|+.+||+.+|..|+
T Consensus       480 ~APEvl~~~-~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~---~~~s~~vS~~AKdLl~~LL~~dP~~Rl  555 (612)
T KOG0603|consen  480 VAPEVLAIQ-EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQM---PKFSECVSDEAKDLLQQLLQVDPALRL  555 (612)
T ss_pred             cChhhhccC-CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcC---CccccccCHHHHHHHHHhccCChhhCc
Confidence            389999754 4999999999999999999999999765544233222222   233477899999999999999999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      ++.++..|+|+.
T Consensus       556 ~~~~i~~h~w~~  567 (612)
T KOG0603|consen  556 GADEIGAHPWFL  567 (612)
T ss_pred             ChhhhccCcchh
Confidence            999999999993

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=5.5e-20  Score=118.98  Aligned_cols=100  Identities=47%  Similarity=0.847  Sum_probs=82.1

Q ss_pred             CCCcceec-CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~-~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++-. .++|+.++|||||||++.||.+|++||..... ..+.+...-....|++|..++.++++|+.+|+.++|.+
T Consensus       743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~  822 (1226)
T KOG4279|consen  743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCD  822 (1226)
T ss_pred             hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCccc
Confidence            89998853 34799999999999999999999999976543 33444444444457788999999999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCcccc
Q 033880           79 RPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      ||+++++++.||++......++
T Consensus       823 R~sA~~LL~DpFlq~~~kk~r~  844 (1226)
T KOG4279|consen  823 RPSAKDLLQDPFLQHNNKKPRP  844 (1226)
T ss_pred             CccHHHhccCcccccCCCCCCC
Confidence            9999999999999877444444

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.79  E-value=8.2e-19  Score=104.65  Aligned_cols=91  Identities=27%  Similarity=0.489  Sum_probs=66.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC----------------C---CC-------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK----------------E---LP-------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------~---~~-------   54 (109)
                      +|||++.....++.++|+||+|++++++++|..||.+.+............                .   .+       
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGL  244 (282)
T ss_pred             CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccH
Confidence            579976554457889999999999999999999997654333222111000                0   00       


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                       ......+..+.+++.+||..+|++||+++++++|+||
T Consensus       245 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         245 RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence             0012356889999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.79  E-value=1.1e-18  Score=107.67  Aligned_cols=92  Identities=24%  Similarity=0.354  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------------------C------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------------------P------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~------   54 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.+.......+......                    +      
T Consensus       192 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (364)
T cd07875         192 RAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS  270 (364)
T ss_pred             CCHHHHhCCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCC
Confidence            5899886654 889999999999999999999999765433322221110000                    0      


Q ss_pred             --------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           55 --------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        55 --------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                                    ......+..+.+++.+|+..+|.+||++.++++||||..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         271 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             hHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                          001113456889999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.79  E-value=1.4e-18  Score=104.66  Aligned_cols=95  Identities=37%  Similarity=0.618  Sum_probs=73.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|+++|++++|..||...+............. ....+...+..+.+++.+||..+|++|
T Consensus       182 ~aPE~~~~~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  260 (296)
T cd06655         182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR  260 (296)
T ss_pred             cCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhC
Confidence            5789886544 78899999999999999999999987655444333322211 112345678889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |++.++++|+||+...+
T Consensus       261 pt~~~il~~~~~~~~~~  277 (296)
T cd06655         261 GSAKELLQHPFLKLAKP  277 (296)
T ss_pred             CCHHHHhhChHhhhccc
Confidence            99999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.79  E-value=1.5e-18  Score=103.66  Aligned_cols=91  Identities=32%  Similarity=0.574  Sum_probs=67.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-------------------C-------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-------------------P-------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~-------   54 (109)
                      +|||++.+...++.++|+|++|++++++++|..||.+................                   +       
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF  246 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH
Confidence            57998865554688999999999999999999999765433322221110000                   0       


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                       ......+....+++.+||..+|++||+++++++||||
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence             0112356778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.78  E-value=5.6e-19  Score=107.53  Aligned_cols=91  Identities=21%  Similarity=0.378  Sum_probs=74.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+.++.+++.+|+..+|++|+
T Consensus       168 ~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~l~~~p~~R~  244 (323)
T cd05616         168 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKRL  244 (323)
T ss_pred             cCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcCCHHHHHHHHHHcccCHHhcC
Confidence            6899887655 89999999999999999999999987665555544443332  34667889999999999999999999


Q ss_pred             cH-----HHHhcCcccCCC
Q 033880           81 TA-----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~-----~~~l~~~~~~~~   94 (109)
                      +.     .++++|+||+..
T Consensus       245 ~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         245 GCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            74     789999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.78  E-value=1.5e-18  Score=105.01  Aligned_cols=98  Identities=23%  Similarity=0.356  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------------------CCC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------------------PTI----   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~----   56 (109)
                      +|||++.+...++.++|+|++|+++|++++|..||.+.........+......                    ...    
T Consensus       175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNN  254 (309)
T ss_pred             cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCc
Confidence            57898765445788999999999999999999999766544443322211000                    000    


Q ss_pred             ----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           57 ----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        57 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                          ....+....+++.+|+..+|++||+++++++|+||+..+...
T Consensus       255 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~  300 (309)
T cd07845         255 LKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC  300 (309)
T ss_pred             hHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence                012467788999999999999999999999999998655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.78  E-value=1.2e-18  Score=104.15  Aligned_cols=91  Identities=34%  Similarity=0.557  Sum_probs=66.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC---------------------------CCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS---------------------------KEL   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~---------------------------~~~   53 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.............                           ...
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSL  247 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchh
Confidence            58998765555788999999999999999999999765432222111000                           000


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           54 PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        54 ~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      .......+.+..+++.+||..+|++||++++++.|+||
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            00123357788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.78  E-value=1.3e-18  Score=102.49  Aligned_cols=90  Identities=46%  Similarity=0.793  Sum_probs=68.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+|++|++++++++|..||................. ....+...+..+.+++.+||..+|++|
T Consensus       166 ~~PE~~~~~~-~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  244 (256)
T cd06612         166 MAPEVIQEIG-YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEER  244 (256)
T ss_pred             cCHHHHhcCC-CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhC
Confidence            5788876554 88999999999999999999999976554433332222111 111233466789999999999999999


Q ss_pred             CcHHHHhcCccc
Q 033880           80 PTAVKLLDHPFV   91 (109)
Q Consensus        80 ~~~~~~l~~~~~   91 (109)
                      |+++++++|+||
T Consensus       245 ps~~~il~~~~~  256 (256)
T cd06612         245 PSAIQLLQHPFI  256 (256)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.78  E-value=1.9e-18  Score=104.20  Aligned_cols=96  Identities=21%  Similarity=0.407  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC--------------------CCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--------------------KELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--------------------~~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||...........+...                    ...+.     
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC  250 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccccc
Confidence            57888765445788999999999999999999999765433222111000                    00000     


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                         .....+..+++++.+|+..+|.+|++++++++|+||+....
T Consensus       251 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~  294 (301)
T cd07873         251 LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE  294 (301)
T ss_pred             HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence               11245678899999999999999999999999999987653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.78  E-value=1.2e-18  Score=104.34  Aligned_cols=94  Identities=36%  Similarity=0.656  Sum_probs=70.0

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHhhCCCCCCC----CCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPT----IPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++...  ..++.++|+||+|++++++++|..||...... ......... ..+.    .+...+..+.+|+.+||.
T Consensus       174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~  252 (288)
T cd06616         174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DPPILSNSEEREFSPSFVNFINLCLI  252 (288)
T ss_pred             cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-CCCcCCCcCCCccCHHHHHHHHHHcc
Confidence            578887654  24888999999999999999999999754322 122222111 1111    123467889999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      .+|++||++++++.|+||+...
T Consensus       253 ~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         253 KDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             CChhhCcCHHHHhcChhhhchh
Confidence            9999999999999999998754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=5.8e-19  Score=107.81  Aligned_cols=93  Identities=31%  Similarity=0.484  Sum_probs=72.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---CCCC---CCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---PTIP---DDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+||++|+|++|..||.+.........+......   +...   ...+.++.+++.+||..
T Consensus       165 ~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         165 MAPEVLRGKG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             cChhHhcCCC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhC
Confidence            6899887654 899999999999999999999999876554444333221111   1111   24578899999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~   94 (109)
                      +|++|++++++++|+||...
T Consensus       244 ~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         244 PSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hhhhcCCHHHHHhCcccCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.78  E-value=1.9e-18  Score=102.26  Aligned_cols=93  Identities=29%  Similarity=0.524  Sum_probs=73.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch--hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE--GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||++.... ++.++|+|++|+++|++++|..||....  .................+...+..+.+++.+||..+|++
T Consensus       159 ~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  237 (262)
T cd05572         159 VAPEIILNKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEE  237 (262)
T ss_pred             cChhHhcCCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhh
Confidence            5788876544 7889999999999999999999997655  333333333223334456666889999999999999999


Q ss_pred             CCc-----HHHHhcCcccCCC
Q 033880           79 RPT-----AVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~-----~~~~l~~~~~~~~   94 (109)
                      |++     +.++++||||...
T Consensus       238 R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         238 RLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CcCCcccCHHHHhcChhhhCC
Confidence            999     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.78  E-value=1.7e-18  Score=106.52  Aligned_cols=93  Identities=26%  Similarity=0.399  Sum_probs=67.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC-----------------------CC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----------------------KE-----   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-----------------------~~-----   52 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.............                       ..     
T Consensus       185 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T cd07874         185 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_pred             cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccccc
Confidence            5899886654 889999999999999999999999765432222111000                       00     


Q ss_pred             CC------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           53 LP------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        53 ~~------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      .+            ..+...+..+.+++.+|+..+|++||++.++++||||...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             chhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            00            0011234567899999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.78  E-value=1.6e-18  Score=102.17  Aligned_cols=89  Identities=28%  Similarity=0.559  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. .+.++|+|++|++++++++|..||................ .+..+...+.++.+++.+||..+|++||
T Consensus       168 ~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (256)
T cd08218         168 LSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-YPPVSSHYSYDLRNLVSQLFKRNPRDRP  245 (256)
T ss_pred             cCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-CCCCcccCCHHHHHHHHHHhhCChhhCc
Confidence            4788875544 7889999999999999999999997665554444443332 3344667789999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|+||
T Consensus       246 ~~~~vl~~~~~  256 (256)
T cd08218         246 SVNSILEKNFI  256 (256)
T ss_pred             CHHHHhhCcCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.77  E-value=1.1e-18  Score=105.98  Aligned_cols=91  Identities=31%  Similarity=0.526  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.+.......+...  .+..+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         163 IAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPHFPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            6899886655 889999999999999999999999876654444443332  2345667889999999999999999999


Q ss_pred             cH-HHHhcCcccCCC
Q 033880           81 TA-VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~-~~~l~~~~~~~~   94 (109)
                      ++ .++++|+||...
T Consensus       240 ~~~~~l~~h~~~~~~  254 (316)
T cd05592         240 GVDGDIRQHPFFRGI  254 (316)
T ss_pred             CChHHHHcCcccCCC
Confidence            86 578899999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.77  E-value=2.4e-18  Score=101.88  Aligned_cols=93  Identities=35%  Similarity=0.713  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHhhCCCCCCCCCCC-CCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE----GVAAMFKIGNSKELPTIPDD-LSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~   75 (109)
                      ++||++.+. .++.++|+|++|++++++++|..||....    ..............+..+.. .+..+.+++.+||..+
T Consensus       166 ~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         166 MAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             cCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence            578988655 48899999999999999999999986541    11111111122222233333 6788999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |++||++.+++.||||+.-
T Consensus       245 p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         245 PRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             chhCcCHHHHhhCchhhcc
Confidence            9999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.77  E-value=3.8e-18  Score=105.66  Aligned_cols=96  Identities=30%  Similarity=0.478  Sum_probs=79.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.... |+..+|+||+|+++|.|++|.+||.+.........+.....  ....+...+..+++++..++..+|..
T Consensus       205 ~APEvl~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~  283 (382)
T KOG0032|consen  205 VAPEVLGGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRK  283 (382)
T ss_pred             cCchhhcCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCccc
Confidence            6899986545 99999999999999999999999998776666555544433  23446778999999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCc
Q 033880           79 RPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~   97 (109)
                      |+++.++++|||+++....
T Consensus       284 R~ta~~~L~HpWi~~~~~~  302 (382)
T KOG0032|consen  284 RLTAAQALQHPWIKSIGEA  302 (382)
T ss_pred             CCCHHHHhcCccccCCccc
Confidence            9999999999999986433

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.77  E-value=3e-18  Score=103.92  Aligned_cols=91  Identities=22%  Similarity=0.422  Sum_probs=63.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------HHHHHhhCCCCC------------C-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------AAMFKIGNSKEL------------P-----   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~------------~-----   54 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+....         .....+......            +     
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  261 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhh
Confidence            68998876555889999999999999999999998643210         000000000000            0     


Q ss_pred             -------------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 -------------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 -------------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                                         ......+..+.+++.+||..||.+|++++++++||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         262 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                               0001124567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=4.8e-19  Score=108.65  Aligned_cols=93  Identities=34%  Similarity=0.469  Sum_probs=72.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||...........+.........+  ...+..+.+++.+|+. +|.+
T Consensus       197 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~  274 (350)
T cd05573         197 IAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPED  274 (350)
T ss_pred             cCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Chhh
Confidence            5899887654 8999999999999999999999998766554444443321111222  2358999999999997 9999


Q ss_pred             CCc-HHHHhcCcccCCCC
Q 033880           79 RPT-AVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~-~~~~l~~~~~~~~~   95 (109)
                      |++ ++++++||||....
T Consensus       275 R~~s~~~ll~hp~~~~~~  292 (350)
T cd05573         275 RLGSFEEIKSHPFFKGID  292 (350)
T ss_pred             cCCCHHHHhcCCCcCCCC
Confidence            999 99999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.77  E-value=1e-18  Score=110.74  Aligned_cols=91  Identities=31%  Similarity=0.521  Sum_probs=76.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+..+|+||+||++||+..|++||...........+.....  ..|...+..+.+|+..++..||..|.
T Consensus       167 mAPElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v--~~p~~~S~~f~nfl~gLL~kdP~~Rl  243 (808)
T KOG0597|consen  167 MAPELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPV--KPPSTASSSFVNFLQGLLIKDPAQRL  243 (808)
T ss_pred             cCHHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCC--CCcccccHHHHHHHHHHhhcChhhcc
Confidence            8999997655 99999999999999999999999976554444444444443  33668899999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      +..+++.|+|..+.
T Consensus       244 tW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  244 TWTDLLGHPFWKGK  257 (808)
T ss_pred             cHHHHhcChHHhhh
Confidence            99999999998864

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.77  E-value=1.6e-18  Score=105.98  Aligned_cols=95  Identities=27%  Similarity=0.522  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---------------------------------   47 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---------------------------------   47 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||............                                 
T Consensus       169 ~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (333)
T cd06650         169 MSPERLQGTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRP  247 (333)
T ss_pred             cCHHHhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccc
Confidence            5899886544 889999999999999999999998654321111000                                 


Q ss_pred             ----------hCCCCCCCCC-CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           48 ----------GNSKELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        48 ----------~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                                ......+..+ ...+.++++|+.+||..+|++||++.++++|+||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         248 PMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             cccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence                      0000001111 124678899999999999999999999999999987543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.77  E-value=3.1e-18  Score=102.30  Aligned_cols=91  Identities=30%  Similarity=0.603  Sum_probs=67.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC---------------------------CCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS---------------------------KEL   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~---------------------------~~~   53 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||...........+...                           ...
T Consensus       166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL  245 (283)
T ss_pred             CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch
Confidence            58998865544788999999999999999999999765433222221100                           000


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           54 PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        54 ~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      .......+..+.+++.+||..+|++||++++++.|+||
T Consensus       246 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         246 SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            01123456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.77  E-value=2.5e-18  Score=105.39  Aligned_cols=95  Identities=25%  Similarity=0.379  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC---------------------CCCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK---------------------ELPTI---   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~~---   56 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+.+.......+....                     ..+..   
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQ  261 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccch
Confidence            589988764558899999999999999999999997654332222111000                     00000   


Q ss_pred             -----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           57 -----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        57 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                           ....++.+.+++.+|+..+|.+|+++.+++.||||....
T Consensus       262 ~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         262 DLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             hHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence                 122456678999999999999999999999999998643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.77  E-value=4.6e-18  Score=100.39  Aligned_cols=89  Identities=29%  Similarity=0.552  Sum_probs=70.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||++.... ++.++|+|++|++++++++|..||......... ........+..+...+..+.+++.+|+..+|++||
T Consensus       177 ~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp  254 (265)
T cd08217         177 MSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLA-SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRP  254 (265)
T ss_pred             cChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCC
Confidence            5788876544 788999999999999999999999866533322 22233333445667789999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|||+
T Consensus       255 ~~~~il~~~~~  265 (265)
T cd08217         255 STEELLQLPLI  265 (265)
T ss_pred             CHHHHhhCCCC
Confidence            99999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.77  E-value=1.7e-19  Score=109.90  Aligned_cols=91  Identities=29%  Similarity=0.477  Sum_probs=73.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+....  ...+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         163 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             CCHHHHccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHhhcCHHHhC
Confidence            6899886654 8899999999999999999999997765444433332222  234667889999999999999999997


Q ss_pred             -----cHHHHhcCcccCCC
Q 033880           81 -----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~   94 (109)
                           ++.++++|+||.+.
T Consensus       240 ~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         240 GGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.77  E-value=2.2e-18  Score=101.98  Aligned_cols=90  Identities=38%  Similarity=0.717  Sum_probs=69.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC-----CCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-----DDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~   75 (109)
                      ++||++.....++.++|+|++|++++++++|..||................. +...     ...+....+++.+||..+
T Consensus       173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (267)
T cd06610         173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP-PSLETGADYKKYSKSFRKMISLCLQKD  251 (267)
T ss_pred             cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCC-CCcCCccccccccHHHHHHHHHHcCCC
Confidence            4788876553488899999999999999999999976654443333322211 1111     245788999999999999


Q ss_pred             CCCCCcHHHHhcCccc
Q 033880           76 PLNRPTAVKLLDHPFV   91 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~   91 (109)
                      |++||++.++++||||
T Consensus       252 p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         252 PSKRPTAEELLKHKFF  267 (267)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.77  E-value=7.6e-18  Score=101.17  Aligned_cols=95  Identities=38%  Similarity=0.686  Sum_probs=70.8

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++..    ...++.++|+||+|+++|++++|..||.................. ...+...+..+.+++.+||..+
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKH  256 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCC
Confidence            57888742    223678899999999999999999998765544433333222111 1223456788999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~   95 (109)
                      |++||+++++++|+|+....
T Consensus       257 p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         257 PETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             cccCcCHHHHhcCccccccc
Confidence            99999999999999998643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.77  E-value=4.3e-18  Score=100.32  Aligned_cols=89  Identities=29%  Similarity=0.580  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||............... .........+..+.+++.+||..+|++||
T Consensus       169 ~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  246 (257)
T cd08225         169 LSPEICQNRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG-YFAPISPNFSRDLRSLISQLFKVSPRDRP  246 (257)
T ss_pred             cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-cCCCCCCCCCHHHHHHHHHHhccChhhCc
Confidence            4788775544 788999999999999999999999766544444433332 22334456788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|+||
T Consensus       247 t~~~ll~~~~~  257 (257)
T cd08225         247 SITSILKRPFL  257 (257)
T ss_pred             CHHHHhhCCCC
Confidence            99999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.77  E-value=6.4e-18  Score=103.25  Aligned_cols=99  Identities=29%  Similarity=0.458  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CCCCC-----------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKELP-----------------------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------------------   54 (109)
                      +|||++.+...++.++|+|++|++++++++|..||.+.+.......+..   .....                       
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK  279 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH
Confidence            5789886544578899999999999999999999976654433322111   00000                       


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           55 TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        55 ~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                      ......+..+.+++.+||..+|++|+++++++.|+||+.....-+
T Consensus       280 ~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~~  324 (335)
T PTZ00024        280 TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCD  324 (335)
T ss_pred             HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCCC
Confidence            001234677889999999999999999999999999998755444

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.77  E-value=4.6e-18  Score=100.18  Aligned_cols=91  Identities=76%  Similarity=1.223  Sum_probs=71.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||.+.....++.++|+|++|++++++++|..||..................+..+...+....+++.+||..+|++||
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  247 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRP  247 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCc
Confidence            46777643333788999999999999999999999766544444444332333445667789999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|||+
T Consensus       248 ~~~~~l~~~~~  258 (258)
T cd06632         248 TAAELLEHPFV  258 (258)
T ss_pred             CHHHHhcCCCC
Confidence            99999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.77  E-value=4.6e-18  Score=102.04  Aligned_cols=92  Identities=35%  Similarity=0.618  Sum_probs=68.3

Q ss_pred             CCCcceecCC----CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS----GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++....    .++.++|+||+|++++++++|..||.................. ...+......+.+++.+||..+
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  274 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKD  274 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcC
Confidence            5788775322    2578999999999999999999999766544443333222111 1123345678999999999999


Q ss_pred             CCCCCcHHHHhcCcccC
Q 033880           76 PLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~   92 (109)
                      |++||++.++++||||+
T Consensus       275 p~~Rps~~~il~~~~~~  291 (291)
T cd06639         275 FEARPSVTHLLEHPFIK  291 (291)
T ss_pred             hhhCcCHHHHhcCcccC
Confidence            99999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.77  E-value=4.8e-18  Score=100.72  Aligned_cols=90  Identities=44%  Similarity=0.840  Sum_probs=70.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||..................+..+...+..+.+++.+|+. +|..||
T Consensus       176 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp  253 (265)
T cd06652         176 MSPEVISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRP  253 (265)
T ss_pred             cChhhhcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCC
Confidence            5789886544 78899999999999999999999976654444444333333334455667888999999985 899999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      +++++++|+|++
T Consensus       254 ~~~~il~~~~~~  265 (265)
T cd06652         254 SADELLRHTFVH  265 (265)
T ss_pred             CHHHHhcCcccC
Confidence            999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.77  E-value=4.2e-18  Score=102.09  Aligned_cols=96  Identities=38%  Similarity=0.575  Sum_probs=72.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||................. ....+...+..+.+++.+||..+|++|
T Consensus       182 ~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  260 (285)
T cd06648         182 MAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR  260 (285)
T ss_pred             cCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhC
Confidence            5788876544 88899999999999999999999876554433333322211 111123367889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCc
Q 033880           80 PTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~   97 (109)
                      |++.++++|+|+....+.
T Consensus       261 pt~~~il~~~~~~~~~~~  278 (285)
T cd06648         261 ATAAELLNHPFLAKAGPP  278 (285)
T ss_pred             cCHHHHccCcccccCCCc
Confidence            999999999999886653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.76  E-value=4.4e-18  Score=100.24  Aligned_cols=89  Identities=27%  Similarity=0.512  Sum_probs=71.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.... ++.++|+||+|++++++++|..||...+............ ....+...+..+.+++.+||..+|++||
T Consensus       168 ~aPE~~~~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rp  245 (256)
T cd08220         168 ISPELCEGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-FAPISDRYSPDLRQLILSMLNLDPSKRP  245 (256)
T ss_pred             cCchhccCCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-CCCCCCCcCHHHHHHHHHHccCChhhCC
Confidence            5789886544 7889999999999999999999997765444443333322 2234566788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      +++++++|||+
T Consensus       246 t~~~ll~~p~~  256 (256)
T cd08220         246 QLSQIMAQPIC  256 (256)
T ss_pred             CHHHHhhCCCC
Confidence            99999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.76  E-value=3.8e-18  Score=101.97  Aligned_cols=96  Identities=38%  Similarity=0.621  Sum_probs=72.3

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++..    ...++.++|+||+||+++++++|..||................. ....+...+..+.+++.+||..+
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  249 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKN  249 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCC
Confidence            57888741    22367799999999999999999999976654444433322211 11234557889999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      |++||++.++++|+|+.....
T Consensus       250 p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         250 VDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             hhhCcCHHHHhcCCCEeccCC
Confidence            999999999999999986543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.76  E-value=2.6e-18  Score=102.77  Aligned_cols=93  Identities=26%  Similarity=0.434  Sum_probs=70.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.......   ........ .....+...+..+.+++.+||..+|+
T Consensus       164 ~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~  241 (280)
T cd05608         164 MAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-DSVTYPDKFSPASKSFCEALLAKDPE  241 (280)
T ss_pred             cCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-cCCCCcccCCHHHHHHHHHHhcCCHH
Confidence            5899887654 8889999999999999999999997543211   11111111 11234566788999999999999999


Q ss_pred             CCC-----cHHHHhcCcccCCCC
Q 033880           78 NRP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        78 ~R~-----~~~~~l~~~~~~~~~   95 (109)
                      +|+     +++++++||||++..
T Consensus       242 ~R~~~~~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         242 KRLGFRDGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             HhcCCCCCCHHHHhcChhhhcCC
Confidence            999     789999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=8.7e-19  Score=105.21  Aligned_cols=94  Identities=26%  Similarity=0.396  Sum_probs=78.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.... |+..+|+|++|+++|+|++|+.||...+....+..+.....  .+|...+++++.|+..+|..+|.+|.
T Consensus       335 LAPEVleDnD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  335 LAPEVLEDND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--KFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             cCchhhcccc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--cCCccCCHHHHHHHHHHhhcChHhhc
Confidence            5899997666 99999999999999999999999987665555544433333  56888999999999999999999996


Q ss_pred             -----cHHHHhcCcccCCCCCc
Q 033880           81 -----TAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~~~   97 (109)
                           .+.++++|+||.++...
T Consensus       412 GgGpdDakEi~~h~FF~~v~W~  433 (516)
T KOG0690|consen  412 GGGPDDAKEIMRHRFFASVDWE  433 (516)
T ss_pred             CCCchhHHHHHhhhhhccCCHH
Confidence                 58899999999987543

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=2.8e-18  Score=109.68  Aligned_cols=91  Identities=27%  Similarity=0.457  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+|+++|++++|..||.+.............. ....+...+..+.+++.+||..+|.+||
T Consensus       212 ~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~RP  289 (496)
T PTZ00283        212 VAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-YDPLPPSISPEMQEIVTALLSSDPKRRP  289 (496)
T ss_pred             eCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccChhhCc
Confidence            5899886654 8999999999999999999999998766554444433332 2345677889999999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      ++.++++|+|+..
T Consensus       290 s~~ell~~p~~~~  302 (496)
T PTZ00283        290 SSSKLLNMPICKL  302 (496)
T ss_pred             CHHHHHhCHHHHH
Confidence            9999999998764

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.76  E-value=4e-18  Score=100.42  Aligned_cols=89  Identities=27%  Similarity=0.513  Sum_probs=70.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||............... ..+..+...+..+.+++.+||..+|++||
T Consensus       168 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  245 (256)
T cd08529         168 LSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG-VFPPVSQMYSQQLAQLIDQCLTKDYRQRP  245 (256)
T ss_pred             cCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCccccCHHHHHHHHHHccCCcccCc
Confidence            5788886554 788999999999999999999999866544433333332 23334456788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++|+|.
T Consensus       246 ~~~~ll~~~~~  256 (256)
T cd08529         246 DTFQLLRNPSL  256 (256)
T ss_pred             CHHHHhhCCCC
Confidence            99999999984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.76  E-value=6.2e-18  Score=102.26  Aligned_cols=95  Identities=37%  Similarity=0.636  Sum_probs=71.7

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++..  ...++.++|+|++|+++|++++|..||...+.....................+..+.+++.+||..+|++
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  257 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQD  257 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhh
Confidence            58998742  2347889999999999999999999997665544443333222211112345778999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.+++.|+|+....
T Consensus       258 Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         258 RPSSEELLKHRFVLRER  274 (307)
T ss_pred             CcCHHHHhcChhhcccC
Confidence            99999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-18  Score=101.71  Aligned_cols=99  Identities=32%  Similarity=0.566  Sum_probs=77.7

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   76 (109)
                      ||||.+-  ....|+-.+|+||+|++++|+.+|+.||.+.+..............|..+  ..+++.+.+|+..||+.|+
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~  337 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDH  337 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCc
Confidence            7899875  23458899999999999999999999999865554444433333333333  3479999999999999999


Q ss_pred             CCCCcHHHHhcCcccCCCCCccc
Q 033880           77 LNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                      .+||...++++|+|+......+.
T Consensus       338 r~RP~Y~~Ll~h~Fi~~ye~a~~  360 (391)
T KOG0983|consen  338 RKRPKYNKLLEHPFIKRYETAEV  360 (391)
T ss_pred             ccCcchHHHhcCcceeecchhhc
Confidence            99999999999999887655443

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.76  E-value=3.3e-18  Score=106.26  Aligned_cols=95  Identities=26%  Similarity=0.354  Sum_probs=79.2

Q ss_pred             CCCcceec---CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKN---SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~---~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      ||||++..   ..+.+.+.|+|++|+++|.++.|+.||.+......+..++......+......+..++|+.+||..||+
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~  361 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPE  361 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChh
Confidence            69998875   234578899999999999999999999988777777777766553333345688999999999999999


Q ss_pred             CCCcHHHHhcCcccCCCC
Q 033880           78 NRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~~   95 (109)
                      .|++..++..|||.....
T Consensus       362 ~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  362 QRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             heeehhhheecceeccCC
Confidence            999999999999988653

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.2e-18  Score=101.09  Aligned_cols=91  Identities=40%  Similarity=0.678  Sum_probs=67.6

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++..    ...++.++|+|++|++++++++|..||...........+....... ..+...+..+.+++.+||..+
T Consensus       180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  259 (275)
T cd06608         180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKN  259 (275)
T ss_pred             cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcC
Confidence            57887642    1236788999999999999999999997655444444433322211 112235678999999999999


Q ss_pred             CCCCCcHHHHhcCccc
Q 033880           76 PLNRPTAVKLLDHPFV   91 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~   91 (109)
                      |++||++.++++|||+
T Consensus       260 p~~Rpt~~~ll~~~~~  275 (275)
T cd06608         260 YEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999995

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.76  E-value=5.5e-18  Score=100.76  Aligned_cols=91  Identities=55%  Similarity=0.949  Sum_probs=67.8

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC----CCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI----PDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~   75 (109)
                      ++||++.... .++.++|+|++|++++++++|..||..................+..    ...++..+.+++.+||..+
T Consensus       177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06629         177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTIN  256 (272)
T ss_pred             cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCC
Confidence            4788775432 3788999999999999999999999755444333332222221122    2345789999999999999


Q ss_pred             CCCCCcHHHHhcCccc
Q 033880           76 PLNRPTAVKLLDHPFV   91 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~   91 (109)
                      |+.||+++++++|||+
T Consensus       257 p~~Rps~~~il~~~~~  272 (272)
T cd06629         257 PDNRPTARELLQHPFI  272 (272)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.76  E-value=1.7e-18  Score=102.75  Aligned_cols=92  Identities=29%  Similarity=0.632  Sum_probs=72.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-CCCC-------------------CCC-----
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-SKEL-------------------PTI-----   56 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~-------------------~~~-----   56 (109)
                      |||.+.+...|+..+|+|++||++.||++|.+.|++....++++.+.. .+..                   |..     
T Consensus       169 aPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep  248 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP  248 (396)
T ss_pred             ChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccc
Confidence            799888765699999999999999999999999999888777765421 0000                   110     


Q ss_pred             ----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           57 ----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        57 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                          -+..+.-..+|+..|+..||++|++.++++.|+||.+
T Consensus       249 Le~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  249 LERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             hhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence                1124456789999999999999999999999999964

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.76  E-value=1.6e-18  Score=105.55  Aligned_cols=91  Identities=24%  Similarity=0.418  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||...+.......+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       163 ~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  239 (323)
T cd05575         163 LAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL--RLKPNISVSARHLLEGLLQKDRTKRL  239 (323)
T ss_pred             cChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHhCC
Confidence            6899887655 88999999999999999999999987655444444333322  33556789999999999999999999


Q ss_pred             cH----HHHhcCcccCCC
Q 033880           81 TA----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~----~~~l~~~~~~~~   94 (109)
                      ++    .+++.|+||...
T Consensus       240 ~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         240 GAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence            76    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.76  E-value=1e-18  Score=106.64  Aligned_cols=93  Identities=31%  Similarity=0.533  Sum_probs=71.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      ||||++.+...++.++|+||+||++|++++|..||.....   .......... ..+..+...+..+.+++.+||..+|+
T Consensus       173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~  251 (332)
T cd05614         173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPK  251 (332)
T ss_pred             cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            6899886554478899999999999999999999964321   1112111111 22345667889999999999999999


Q ss_pred             CCC-----cHHHHhcCcccCCC
Q 033880           78 NRP-----TAVKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~-----~~~~~l~~~~~~~~   94 (109)
                      +|+     +++++++|+||+..
T Consensus       252 ~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         252 KRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HcCCCCCCCHHHHHcCCCcCCC
Confidence            999     88899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.76  E-value=4.2e-18  Score=104.43  Aligned_cols=97  Identities=31%  Similarity=0.414  Sum_probs=70.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC---------------------CCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---------------------LPTI---   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~---   56 (109)
                      +|||++.+...++.++|+||+|++++++++|+.||.+.........+.....                     .+..   
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRK  260 (342)
T ss_pred             cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccc
Confidence            5899876544478899999999999999999999986543332222111000                     0000   


Q ss_pred             -----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           57 -----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        57 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                           ....+..+.+++.+||..+|++||++++++.|+||......
T Consensus       261 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         261 DFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             hHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence                 12346678899999999999999999999999999986543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.76  E-value=6.4e-18  Score=101.83  Aligned_cols=95  Identities=36%  Similarity=0.586  Sum_probs=72.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+|++|++++++++|..||................. ....+...+..+.+++.+||..+|+.|
T Consensus       183 ~aPE~~~~~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  261 (296)
T cd06654         183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR  261 (296)
T ss_pred             cCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccC
Confidence            5788876544 78899999999999999999999976655444333222221 112345567889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |++.++++|+|+.....
T Consensus       262 pt~~eil~~~~~~~~~~  278 (296)
T cd06654         262 GSAKELLQHQFLKIAKP  278 (296)
T ss_pred             cCHHHHhhChhhhccCC
Confidence            99999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.76  E-value=4.3e-18  Score=101.69  Aligned_cols=93  Identities=26%  Similarity=0.478  Sum_probs=68.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||......   ...................+.+..+++.+||..+|+
T Consensus       161 ~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         161 MAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             cCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHh
Confidence            5899887655 889999999999999999999999754221   111111111111111235788999999999999999


Q ss_pred             CCCcH----HHHhcCcccCCC
Q 033880           78 NRPTA----VKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~~~----~~~l~~~~~~~~   94 (109)
                      +|+++    ++++.|+||.+.
T Consensus       240 ~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         240 DRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             hCCCCccchhhhhcChhhcCC
Confidence            99999    667899999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.76  E-value=3.5e-18  Score=102.21  Aligned_cols=95  Identities=27%  Similarity=0.414  Sum_probs=71.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.....++.++|+||+|++++++++|..||....... ..............+...+..+.+++.+||..+|++|
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  241 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKR  241 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHh
Confidence            589987544447889999999999999999999996542211 1111111112223456678999999999999999999


Q ss_pred             C-----cHHHHhcCcccCCCC
Q 033880           80 P-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        80 ~-----~~~~~l~~~~~~~~~   95 (109)
                      +     +++++++|+||++..
T Consensus       242 ~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         242 LGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             cCCCCCCHHHHHhCccccCCC
Confidence            9     699999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.76  E-value=4.5e-18  Score=103.63  Aligned_cols=91  Identities=23%  Similarity=0.426  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+|++++++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+|+
T Consensus       168 ~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~p~~R~  244 (323)
T cd05615         168 IAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPSKRL  244 (323)
T ss_pred             cCHHHHcCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHHcccCHhhCC
Confidence            6899886554 88999999999999999999999987665544444433322  34567788999999999999999999


Q ss_pred             c-----HHHHhcCcccCCC
Q 033880           81 T-----AVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~   94 (109)
                      +     .+++++|+||+..
T Consensus       245 ~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         245 GCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCCHHHHhcCcccCCC
Confidence            7     4789999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.76  E-value=1.1e-17  Score=101.58  Aligned_cols=95  Identities=35%  Similarity=0.649  Sum_probs=72.2

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++..  ...++.++|+||+|++++++++|..||...+.....................+....+++.+||..+|.+
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~  263 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQE  263 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhh
Confidence            57898742  2347889999999999999999999987765555444443332222223345678999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++|+||+...
T Consensus       264 Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         264 RPASAELLRHDFVRRDR  280 (313)
T ss_pred             CcCHHHHhcCcccCCCc
Confidence            99999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.76  E-value=2.4e-18  Score=104.95  Aligned_cols=100  Identities=27%  Similarity=0.499  Sum_probs=71.4

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------------------------
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------------------------   53 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------   53 (109)
                      |+||++.+. ..++.++|+||+||+++++++|..||..................                          
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd08226         175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI  254 (328)
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence            588988643 23788999999999999999999999765433322221111000                          


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcccc
Q 033880           54 -------------------PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        54 -------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                                         .......+..+.+++.+||..+|++||+++++++|+||.......+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~~~~  320 (328)
T cd08226         255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQTQG  320 (328)
T ss_pred             ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHhccc
Confidence                               00012245668899999999999999999999999999877665554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4e-18  Score=107.49  Aligned_cols=97  Identities=28%  Similarity=0.466  Sum_probs=79.7

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCc
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT   81 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~   81 (109)
                      |||.+.+..+..+++||||+|+++|.+.+|+.||...+....+-.+..=..  .+|...+.++++|+..||..+|++|.+
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAs  263 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRAS  263 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhcc
Confidence            799998877677899999999999999999999987766555543322212  457788999999999999999999999


Q ss_pred             HHHHhcCcccCCCCCcccc
Q 033880           82 AVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~  100 (109)
                      .++|..++|+++..+....
T Consensus       264 lEeI~s~~Wlq~~D~~~sT  282 (864)
T KOG4717|consen  264 LEEIVSTSWLQAGDRGLST  282 (864)
T ss_pred             HHHHhccccccCCCCCccc
Confidence            9999999999986554433

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.76  E-value=9.3e-18  Score=102.93  Aligned_cols=94  Identities=29%  Similarity=0.475  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC-----------------------CCCCC--
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----------------------KELPT--   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-----------------------~~~~~--   55 (109)
                      +|||++.....++.++|+||+||+++++++|..||...............                       .....  
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRP  264 (342)
T ss_pred             cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCC
Confidence            47887655445788999999999999999999999755432222211100                       00000  


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                         .....+..+.+++.+||..+|.+||+++++++|+||+..
T Consensus       265 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         265 LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence               112456788899999999999999999999999999843

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.76  E-value=4.5e-18  Score=101.67  Aligned_cols=91  Identities=26%  Similarity=0.489  Sum_probs=64.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCC-CCchhHHHHHHhhC------------------CCCCCC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-SQYEGVAAMFKIGN------------------SKELPT------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~-~~~~~~~~~~~~~~------------------~~~~~~------   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..|+ .+.........+..                  ....+.      
T Consensus       166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS  245 (284)
T ss_pred             cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcch
Confidence            58998866555788999999999999999988775 33322211111100                  000000      


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                         .....+..+.+++.+||..+|.+||++++++.|+||
T Consensus       246 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence               112356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.76  E-value=3.8e-18  Score=101.80  Aligned_cols=94  Identities=41%  Similarity=0.696  Sum_probs=72.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||............. ....+..+...+..+.+++.+||..+|++||
T Consensus       168 ~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06640         168 MAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDACLNKDPSFRP  245 (277)
T ss_pred             cCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhhHHHHHHHHHHcccCcccCc
Confidence            4788876544 7889999999999999999999997655443333222 2222334455678899999999999999999


Q ss_pred             cHHHHhcCcccCCCCC
Q 033880           81 TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~   96 (109)
                      +++++++|+|+.....
T Consensus       246 ~~~~il~~~~~~~~~~  261 (277)
T cd06640         246 TAKELLKHKFIVKNAK  261 (277)
T ss_pred             CHHHHHhChHhhhcch
Confidence            9999999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.76  E-value=2.4e-18  Score=104.27  Aligned_cols=91  Identities=21%  Similarity=0.338  Sum_probs=63.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------HHHHHhhC---------------CC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------AAMFKIGN---------------SK-----   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~---------------~~-----   51 (109)
                      +|||++.+...++.++|+||+|++++++++|..||......         .....+..               ..     
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTL  261 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhh
Confidence            68998866555889999999999999999999998643210         00000000               00     


Q ss_pred             --------C--------CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           52 --------E--------LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        52 --------~--------~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                              .        ........+..+.+++.+|+..+|.+||+++++++||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         262 QKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                    0        000011234567789999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.76  E-value=1.6e-18  Score=111.00  Aligned_cols=84  Identities=23%  Similarity=0.402  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||.++ .+.|+.++|+|.||+++||++. |..||.+..+.+....+..+... +.|+.+++.++.+|.+||+++|.+|
T Consensus       559 maPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl-P~P~nCPp~LYslmskcWayeP~kR  636 (974)
T KOG4257|consen  559 MAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL-PCPPNCPPALYSLMSKCWAYEPSKR  636 (974)
T ss_pred             cCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC-CCCCCCChHHHHHHHHHhccCcccC
Confidence            7999985 4559999999999999999999 99999998877776666666554 4689999999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |.+.++.
T Consensus       637 Prftei~  643 (974)
T KOG4257|consen  637 PRFTEIK  643 (974)
T ss_pred             CcHHHHH
Confidence            9998864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.76  E-value=3.4e-18  Score=106.21  Aligned_cols=94  Identities=28%  Similarity=0.391  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHhh--hCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQ--RNP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~--~~p   76 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||...........+.........  ....+.++.+++.+++.  .++
T Consensus       215 ~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~  293 (381)
T cd05626         215 IAPEVLLRKG-YTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEER  293 (381)
T ss_pred             cCHHHHcCCC-CCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccc
Confidence            6899886554 889999999999999999999999876554444443322221122  23468899999998554  445


Q ss_pred             CCCCcHHHHhcCcccCCCC
Q 033880           77 LNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~~   95 (109)
                      ..|+++++++.|+||....
T Consensus       294 ~~R~~~~~~l~hp~f~~~~  312 (381)
T cd05626         294 LGRNGADDIKAHPFFSEVD  312 (381)
T ss_pred             cCCCCHHHHhcCcccCCCC
Confidence            5599999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.75  E-value=2.5e-18  Score=103.61  Aligned_cols=99  Identities=36%  Similarity=0.598  Sum_probs=73.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.+.. ++.++|+|++|+++|++++|..||.+.+............. ....+...+....+++.+||..+|++|
T Consensus       182 ~aPE~~~~~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  260 (297)
T cd06656         182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR  260 (297)
T ss_pred             cCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence            4688776544 78899999999999999999999976544333222222111 112345567889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcccc
Q 033880           80 PTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      |++.++++|+||.........
T Consensus       261 ps~~~il~~~~~~~~~~~~~~  281 (297)
T cd06656         261 GSAKELLQHPFLKLAKPLSSL  281 (297)
T ss_pred             cCHHHHhcCchhccccccccc
Confidence            999999999999876555443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.75  E-value=5.7e-18  Score=101.71  Aligned_cols=92  Identities=33%  Similarity=0.555  Sum_probs=67.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC------------------CC--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------------------LP--------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------~~--------   54 (109)
                      +|||++.+...++.++|+|++|++++++++|..||.+.........+.....                  .+        
T Consensus       178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLS  257 (295)
T ss_pred             CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHH
Confidence            5788876544578999999999999999999999976544333222111000                  00        


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           55 TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        55 ~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                      ......+..+.+++.+||..+|++||++++++.|+||.
T Consensus       258 ~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         258 RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            00124677889999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.75  E-value=1e-17  Score=100.06  Aligned_cols=93  Identities=29%  Similarity=0.593  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH------HHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV------AAMFKIGNSKELPTI-PDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||......      ............+.. ....+..+.+++.+||.
T Consensus       160 ~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (279)
T cd06619         160 MAPERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMR  238 (279)
T ss_pred             cCceeecCCC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhh
Confidence            5899887655 889999999999999999999998643211      111111111111111 23467889999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      .+|++||+++++++|+|++..
T Consensus       239 ~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         239 KQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             CChhhCCCHHHHhcCcccccc
Confidence            999999999999999999765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.75  E-value=3e-18  Score=103.74  Aligned_cols=99  Identities=30%  Similarity=0.556  Sum_probs=69.3

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------C-----------------
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------P-----------------   54 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~-----------------   54 (109)
                      +|||++... ..++.++|+||+|++++++++|..||..................        +                 
T Consensus       175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (314)
T cd08216         175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN  254 (314)
T ss_pred             cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence            578887543 24788999999999999999999999765433322211110000        0                 


Q ss_pred             -------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           55 -------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        55 -------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                             ......+..+.+++..||..+|++||+++++++||||+......+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~~~  306 (314)
T cd08216         255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRNT  306 (314)
T ss_pred             hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcccch
Confidence                   001112356788999999999999999999999999997764433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.75  E-value=9.2e-18  Score=102.30  Aligned_cols=100  Identities=29%  Similarity=0.398  Sum_probs=72.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------   53 (109)
                      +|||++.+...++.++|+|++|++++++++|..||.+.........+......                           
T Consensus       173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (330)
T cd07834         173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKK  252 (330)
T ss_pred             CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcc
Confidence            57998876535889999999999999999999999765433322211110000                           


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcccc
Q 033880           54 --PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        54 --~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                        .......+..+.+++.+||..+|++||+++++++|+||.........
T Consensus       253 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~  301 (330)
T cd07834         253 PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE  301 (330)
T ss_pred             hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence              00112356788999999999999999999999999999876555443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.9e-18  Score=101.62  Aligned_cols=94  Identities=31%  Similarity=0.405  Sum_probs=72.6

Q ss_pred             CCCcceec-----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN-----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~-----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||.+..     ..+|+..+|.|++|+++|.++.|.+||......-.+..+..+...  .+-+...+...++|+.+||+
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLq  268 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQ  268 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHe
Confidence            58888763     335889999999999999999999999764433333223222221  23356788899999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      .+|++|++++++++||||...
T Consensus       269 Vdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  269 VDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             eCchhcccHHHHhcChHHHHH
Confidence            999999999999999999654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.5e-18  Score=102.45  Aligned_cols=93  Identities=29%  Similarity=0.512  Sum_probs=71.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh--CCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG--NSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+|+++|++++|..||.+.........+.  ........+...+..+.+++.+||..+|++
T Consensus       168 ~aPE~~~~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  246 (285)
T cd05605         168 MAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGF  246 (285)
T ss_pred             cCcHHhcCCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHH
Confidence            5899886554 8889999999999999999999998654322211111  111122345567889999999999999999


Q ss_pred             CC-----cHHHHhcCcccCCC
Q 033880           79 RP-----TAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~-----~~~~~l~~~~~~~~   94 (109)
                      |+     +++++++|+||...
T Consensus       247 R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         247 RLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             hcCCCCCCHHHHhcCcCccCC
Confidence            99     89999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=7.9e-18  Score=100.49  Aligned_cols=95  Identities=38%  Similarity=0.681  Sum_probs=72.1

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ++||++..    ...++.++|+||+|+++|++++|..||.................. ...+...+..+.+++.+||..+
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  249 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKD  249 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccC
Confidence            47887642    123677899999999999999999999876555444444332211 1224557789999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~   95 (109)
                      |++||++.++++|+|+....
T Consensus       250 p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         250 PDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             hhhCcCHHHHhcChhhcccc
Confidence            99999999999999998763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.75  E-value=8.9e-18  Score=103.75  Aligned_cols=94  Identities=29%  Similarity=0.442  Sum_probs=68.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhh--CC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQR--NP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~--~p   76 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.........+........++  ...+..+++++.+++..  ++
T Consensus       203 ~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r  281 (363)
T cd05628         203 IAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHR  281 (363)
T ss_pred             cCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhc
Confidence            5899886654 8899999999999999999999998766555554444322211222  24678899999886542  23


Q ss_pred             CCCCcHHHHhcCcccCCCC
Q 033880           77 LNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~~   95 (109)
                      ..||+++++++||||.+..
T Consensus       282 ~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         282 IGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             CCCCCHHHHhCCCCCCCCC
Confidence            3568999999999998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.75  E-value=9e-18  Score=99.70  Aligned_cols=91  Identities=49%  Similarity=0.863  Sum_probs=68.8

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++... ..++.++|+||+|++++++++|..||........ ..........+..+...+..+.+++.+||..+|++
T Consensus       176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  255 (268)
T cd06624         176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDK  255 (268)
T ss_pred             cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchh
Confidence            478887532 2378899999999999999999999875432222 12221122233456677889999999999999999


Q ss_pred             CCcHHHHhcCccc
Q 033880           79 RPTAVKLLDHPFV   91 (109)
Q Consensus        79 R~~~~~~l~~~~~   91 (109)
                      ||++.+++.||||
T Consensus       256 Rpt~~~ll~~~~~  268 (268)
T cd06624         256 RASAHDLLQDPFL  268 (268)
T ss_pred             CCCHHHHHhCCCC
Confidence            9999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.75  E-value=8.7e-18  Score=101.72  Aligned_cols=97  Identities=36%  Similarity=0.609  Sum_probs=73.0

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++..  ...++.++|+||+|++++++++|..||.........................+..+.+++.+||..+|.+
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~  257 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD  257 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCccc
Confidence            57887642  2336789999999999999999999987665444444433333222223456788999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCc
Q 033880           79 RPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~   97 (109)
                      ||++++++.|+|+......
T Consensus       258 Rp~~~~ll~~~~~~~~~~~  276 (308)
T cd06634         258 RPTSEVLLKHRFVLRERPP  276 (308)
T ss_pred             CCCHHHHhhCccccccCCh
Confidence            9999999999998875443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.75  E-value=4.1e-18  Score=104.06  Aligned_cols=92  Identities=25%  Similarity=0.497  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch--------hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE--------GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||....        ............ ....+...+..+.+++.+||
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L  240 (329)
T cd05588         163 IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKASSVLKGFL  240 (329)
T ss_pred             cCHHHHcCCC-CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHh
Confidence            5899887654 8899999999999999999999995321        111111111111 12346678899999999999


Q ss_pred             hhCCCCCCc------HHHHhcCcccCCC
Q 033880           73 QRNPLNRPT------AVKLLDHPFVKGA   94 (109)
Q Consensus        73 ~~~p~~R~~------~~~~l~~~~~~~~   94 (109)
                      ..+|.+|++      ++++++||||...
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         241 NKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             ccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            999999987      7899999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.75  E-value=5.7e-18  Score=101.20  Aligned_cols=91  Identities=29%  Similarity=0.636  Sum_probs=66.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--------------------CCCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--------------------SKELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--------------------~~~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..                    ....+.     
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence            4788876544578899999999999999999999976544333222110                    000000     


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                          .....+....+++.+||..+|++||++.+++.|+||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                012346778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.75  E-value=5.8e-18  Score=101.22  Aligned_cols=91  Identities=33%  Similarity=0.584  Sum_probs=66.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--------------------CCCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--------------------SKELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--------------------~~~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..+|...........+..                    ....+.     
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE  246 (286)
T ss_pred             cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence            5789876544578899999999999999999998875443222211110                    000000     


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                          .....+..+.+++.+||..+|++||++.++++|+||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                123457789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.75  E-value=8.5e-18  Score=99.35  Aligned_cols=93  Identities=41%  Similarity=0.688  Sum_probs=71.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch--hHHHHHHhhCCCCCCCCCCC-CCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE--GVAAMFKIGNSKELPTIPDD-LSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||.+... .++.++|+|++|++++++++|..||....  ..............+..+.. .+..+.+++..||..+|+
T Consensus       167 ~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         167 MSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             cCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChh
Confidence            478887554 47889999999999999999999997653  22222222223333344445 788999999999999999


Q ss_pred             CCCcHHHHhcCcccCCC
Q 033880           78 NRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~   94 (109)
                      .||++.++++|+|++..
T Consensus       246 ~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         246 KRPSAAELLQHPFIKKA  262 (264)
T ss_pred             hCCCHHHHHhCHHHHhc
Confidence            99999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.75  E-value=3.2e-18  Score=102.65  Aligned_cols=92  Identities=26%  Similarity=0.517  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||......   ......... .....+...+....+++.+||..+|+
T Consensus       168 ~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  245 (285)
T cd05630         168 MAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPK  245 (285)
T ss_pred             cChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHH
Confidence            5899886654 889999999999999999999999764321   111111111 11123456788899999999999999


Q ss_pred             CCCc-----HHHHhcCcccCCC
Q 033880           78 NRPT-----AVKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~~-----~~~~l~~~~~~~~   94 (109)
                      +|++     ++++++|+||...
T Consensus       246 ~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         246 ERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HccCCCCCchHHHHcChhhhcc
Confidence            9999     8999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.75  E-value=5.7e-18  Score=101.92  Aligned_cols=95  Identities=37%  Similarity=0.621  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+|++|++++++++|..||.................. ...+...+....+++.+||..+|++|
T Consensus       182 ~~PE~~~~~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  260 (293)
T cd06647         182 MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR  260 (293)
T ss_pred             cCchhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence            5788876544 788999999999999999999999765543333222221111 11233456789999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |++++++.|+||+...+
T Consensus       261 p~~~~il~h~~~~~~~~  277 (293)
T cd06647         261 GSAKELLQHPFLKIAKP  277 (293)
T ss_pred             cCHHHHhcCHHHhcCcc
Confidence            99999999999987653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=5.9e-18  Score=110.26  Aligned_cols=85  Identities=25%  Similarity=0.425  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||.+... .|+.++|+||+|+++||+++ |..||.+......+......+.....|..++.+++++|..||..+|+.|
T Consensus       488 mApEsl~~~-~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~R  566 (609)
T KOG0200|consen  488 MAPESLFDR-VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDR  566 (609)
T ss_pred             cCHHHhccC-cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccC
Confidence            799999774 49999999999999999999 9999998653333344444445555688889999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |++.++.
T Consensus       567 P~F~~~~  573 (609)
T KOG0200|consen  567 PTFSECV  573 (609)
T ss_pred             CCHHHHH
Confidence            9999875

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.75  E-value=7.3e-18  Score=110.91  Aligned_cols=93  Identities=28%  Similarity=0.466  Sum_probs=73.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+......+..+..... .+......+..+.+++..||..+|.+|
T Consensus       547 ~APE~l~~~~-~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R  625 (669)
T cd05610         547 LAPELLLGKP-HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKR  625 (669)
T ss_pred             cCHHHcCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHC
Confidence            6899987655 89999999999999999999999987655554444432221 122233567788999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      +++.++++|+||...
T Consensus       626 ~ta~e~l~h~~~~~~  640 (669)
T cd05610         626 AGLKELKQHPLFHGV  640 (669)
T ss_pred             cCHHHHHhCHhhcCC
Confidence            999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.75  E-value=8.8e-18  Score=100.55  Aligned_cols=98  Identities=34%  Similarity=0.594  Sum_probs=72.9

Q ss_pred             CCCcceecCC-----CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHH--HhhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF--KIGNSKELPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~~-----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++....     .++.++|+|++||+++++++|..||..........  ........+..+...+.++.+++.+||.
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (286)
T cd06622         168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLN  247 (286)
T ss_pred             cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcc
Confidence            5788774322     25789999999999999999999996543322221  1122222334556688999999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           74 RNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      .+|++||++++++.|+||.......
T Consensus       248 ~~p~~Rp~~~~l~~~~~~~~~~~~~  272 (286)
T cd06622         248 KIPNRRPTYAQLLEHPWLVKYKNAD  272 (286)
T ss_pred             cCcccCCCHHHHhcChhhhhccCCc
Confidence            9999999999999999998765543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.5e-18  Score=105.44  Aligned_cols=93  Identities=33%  Similarity=0.433  Sum_probs=71.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.... ++.++|+||+||++|++++|..||...........+.........  ....+..+.+++.+|+. +|.+
T Consensus       206 ~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~  283 (364)
T cd05599         206 IAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAER  283 (364)
T ss_pred             cCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhh
Confidence            6899886554 889999999999999999999999876655444444332221122  23467899999999986 8999


Q ss_pred             CCc---HHHHhcCcccCCCC
Q 033880           79 RPT---AVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~---~~~~l~~~~~~~~~   95 (109)
                      |++   +.++++|+||.+..
T Consensus       284 R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         284 RLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             cCCCCCHHHHhcCCCcCCCC
Confidence            997   99999999998753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.75  E-value=1.7e-17  Score=99.20  Aligned_cols=92  Identities=25%  Similarity=0.468  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--------------------CC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--------------------LP------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~------   54 (109)
                      +|||++.....++.++|+|++|++++++++|.++|.+...............                    .+      
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP  246 (286)
T ss_pred             cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence            5799886555578999999999999999999888866543332221110000                    00      


Q ss_pred             --CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           55 --TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        55 --~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                        ......+..+.+++.+|+..+|.+||+++++++|+||.
T Consensus       247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence              00123457889999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.75  E-value=1.5e-17  Score=97.82  Aligned_cols=90  Identities=61%  Similarity=1.090  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.... .+.++|+|++|++++++++|..||.... ..............+..+...+....+++.+|+..+|++|
T Consensus       170 ~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R  248 (260)
T cd06606         170 MAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKR  248 (260)
T ss_pred             cCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhC
Confidence            4688775544 7889999999999999999999997655 2222333332233344566778999999999999999999


Q ss_pred             CcHHHHhcCccc
Q 033880           80 PTAVKLLDHPFV   91 (109)
Q Consensus        80 ~~~~~~l~~~~~   91 (109)
                      |++.++++||||
T Consensus       249 p~~~~ll~~~~~  260 (260)
T cd06606         249 PTADELLQHPFL  260 (260)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.75  E-value=6.7e-18  Score=103.29  Aligned_cols=86  Identities=23%  Similarity=0.380  Sum_probs=66.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+...................+...+..+.+++.+||..+|++|
T Consensus       243 ~aPE~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  321 (338)
T cd05102         243 MAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKER  321 (338)
T ss_pred             cCcHHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            6899886655 8999999999999999997 9999976543333323222222233456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       322 Ps~~el~~  329 (338)
T cd05102         322 PTFSALVE  329 (338)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.74  E-value=1.1e-17  Score=99.47  Aligned_cols=89  Identities=27%  Similarity=0.489  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH----HHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA----AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.......    ......  ......+...+..+.+++.+||+.+|
T Consensus       173 ~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p  249 (267)
T PHA03390        173 FSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNI  249 (267)
T ss_pred             cChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccCHHHHHHHHHHhccCh
Confidence            5899886555 8899999999999999999999997443211    111111  11223345688999999999999999


Q ss_pred             CCCCc-HHHHhcCcccC
Q 033880           77 LNRPT-AVKLLDHPFVK   92 (109)
Q Consensus        77 ~~R~~-~~~~l~~~~~~   92 (109)
                      .+|++ ++++++|+||.
T Consensus       250 ~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        250 NYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             hhCCchHHHHhcCCccc
Confidence            99996 69999999986

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.74  E-value=1.1e-17  Score=100.65  Aligned_cols=97  Identities=39%  Similarity=0.573  Sum_probs=72.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC-CCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-ELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+.... .........+..+.+++.+||..+|.+|
T Consensus       185 ~aPE~~~~~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  263 (292)
T cd06658         185 MAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQR  263 (292)
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHC
Confidence            5788875544 7889999999999999999999997655443333322211 1111223467789999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcc
Q 033880           80 PTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~   98 (109)
                      |+++++++|+||.......
T Consensus       264 pt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         264 ATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             cCHHHHhhChhhhccCCcc
Confidence            9999999999999765554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.74  E-value=8.3e-18  Score=101.23  Aligned_cols=98  Identities=31%  Similarity=0.569  Sum_probs=71.0

Q ss_pred             CCCcceecC---CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHhhCCCCCCCC--CCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNS---SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTI--PDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~---~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++...   ..++.++|+||+|++++++++|..||........ ........ .+..  ....+..+.+++.+||..
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~  259 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-PPSLPPNEGFSPDFCSFVDLCLTK  259 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHHHHccC
Confidence            578877532   2367899999999999999999999975433222 22222221 1111  224678899999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCCCccc
Q 033880           75 NPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                      +|++||+++++++|+|+........
T Consensus       260 ~p~~Rp~~~~il~~~~~~~~~~~~~  284 (296)
T cd06618         260 DHRKRPKYRELLQHPFIRRYETAEV  284 (296)
T ss_pred             ChhhCCCHHHHhcChhhhccchhHH
Confidence            9999999999999999987655444

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.74  E-value=2.1e-18  Score=106.83  Aligned_cols=95  Identities=28%  Similarity=0.460  Sum_probs=75.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh--hCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. |+..+|+|++||++|+|+.|+.||...........+  ........++..++++++++...+|+.+|.+
T Consensus       353 MAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~  431 (591)
T KOG0986|consen  353 MAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEK  431 (591)
T ss_pred             cCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHH
Confidence            8999998776 999999999999999999999999765433322111  1111223567889999999999999999999


Q ss_pred             CC-----cHHHHhcCcccCCCCC
Q 033880           79 RP-----TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        79 R~-----~~~~~l~~~~~~~~~~   96 (109)
                      |.     +++++.+||||+....
T Consensus       432 RLGcrg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  432 RLGCRGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             hccCCCcCcchhhhCcccccCCH
Confidence            97     5668999999998643

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.74  E-value=1.4e-17  Score=102.14  Aligned_cols=99  Identities=28%  Similarity=0.405  Sum_probs=71.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------C-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------P-----   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~-----   54 (109)
                      +|||.+.+...++.++|+||+|++++++++|..||.+.........+......                     +     
T Consensus       182 ~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKK  261 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCC
Confidence            47887754445788999999999999999999999765443332222111000                     0     


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           55 ---TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        55 ---~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                         ......+..+.+++.+||..+|++||++.++++|+||......+.
T Consensus       262 ~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~  309 (343)
T cd07851         262 DFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED  309 (343)
T ss_pred             CHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc
Confidence               001234778999999999999999999999999999987554443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.74  E-value=9.5e-18  Score=106.87  Aligned_cols=91  Identities=29%  Similarity=0.423  Sum_probs=73.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||+++++++|..||.+.........+..... .+.+...+..+.+++.+||..+|++||
T Consensus       238 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rp  315 (478)
T PTZ00267        238 LAPELWERKR-YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-DPFPCPVSSGMKALLDPLLSKNPALRP  315 (478)
T ss_pred             cCHhHhCCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCccCCHHHHHHHHHHhccChhhCc
Confidence            6899886544 89999999999999999999999987655444444433322 234566788999999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      ++.+++.|+|++.
T Consensus       316 s~~~~l~~~~~~~  328 (478)
T PTZ00267        316 TTQQLLHTEFLKY  328 (478)
T ss_pred             CHHHHHhCHHHHH
Confidence            9999999988753

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=9.8e-19  Score=106.24  Aligned_cols=91  Identities=32%  Similarity=0.507  Sum_probs=73.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.... ++.++|+||+|+++|++++|..||...........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       165 ~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~  241 (318)
T cd05582         165 MAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRL  241 (318)
T ss_pred             cCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcC
Confidence            5889886544 78899999999999999999999987665544444433322  34667789999999999999999999


Q ss_pred             c-----HHHHhcCcccCCC
Q 033880           81 T-----AVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~   94 (109)
                      +     ..+++.|+||...
T Consensus       242 ~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         242 GAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCCCCHHHHhCCCCcCCC
Confidence            9     6779999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.74  E-value=4.9e-18  Score=103.70  Aligned_cols=92  Identities=25%  Similarity=0.515  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch--------hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE--------GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||....        ............ ....+...+..+.+++.+||
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ll~~~L  240 (329)
T cd05618         163 IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFL  240 (329)
T ss_pred             cCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHh
Confidence            5899886654 8889999999999999999999995211        111111211111 12456778899999999999


Q ss_pred             hhCCCCCCc------HHHHhcCcccCCC
Q 033880           73 QRNPLNRPT------AVKLLDHPFVKGA   94 (109)
Q Consensus        73 ~~~p~~R~~------~~~~l~~~~~~~~   94 (109)
                      ..+|++|++      +.+++.||||+..
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         241 NKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             cCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            999999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.74  E-value=5.2e-18  Score=105.06  Aligned_cols=94  Identities=29%  Similarity=0.431  Sum_probs=72.6

Q ss_pred             CCCcceecCC---CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS---GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~---~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++.+..   .++.++|+||+||++|++++|..||.+.........+.........+  ...+..+.+++.+|+..+
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~  289 (370)
T cd05596         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDR  289 (370)
T ss_pred             ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccCh
Confidence            5889875432   37889999999999999999999998766555554444332222223  346889999999999988


Q ss_pred             CCC--CCcHHHHhcCcccCCC
Q 033880           76 PLN--RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~--R~~~~~~l~~~~~~~~   94 (109)
                      |.+  |+++++++.|+||+..
T Consensus       290 p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         290 EVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             hhccCCCCHHHHhcCcccCCC
Confidence            887  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3e-18  Score=106.27  Aligned_cols=92  Identities=33%  Similarity=0.481  Sum_probs=70.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.........+  ...+..+.+++.+|+. +|.+
T Consensus       215 ~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~  292 (377)
T cd05629         215 IAPEIFLQQG-YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAEN  292 (377)
T ss_pred             cCHHHHccCC-CCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhh
Confidence            5899886554 8899999999999999999999998766554444443322222222  2467889999999997 6666


Q ss_pred             C---CcHHHHhcCcccCCC
Q 033880           79 R---PTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R---~~~~~~l~~~~~~~~   94 (109)
                      |   +++.++++|+||++.
T Consensus       293 r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         293 RLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             cCCCCCHHHHhcCCCcCCC
Confidence            5   599999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.74  E-value=2.6e-17  Score=97.35  Aligned_cols=91  Identities=54%  Similarity=0.917  Sum_probs=67.0

Q ss_pred             CCCcceecCC--CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCC--CCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD--LSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~--~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~p   76 (109)
                      ++||++....  .++.++|+|++|++++++++|..||..................+..+..  .+....+++.+||..+|
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  249 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDP  249 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCc
Confidence            4788775332  2678999999999999999999999755322222222222222333433  37889999999999999


Q ss_pred             CCCCcHHHHhcCccc
Q 033880           77 LNRPTAVKLLDHPFV   91 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~   91 (109)
                      .+||++.+++.|+|+
T Consensus       250 ~~R~~~~~i~~~~~~  264 (264)
T cd06626         250 KKRPTASELLQHPFV  264 (264)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.74  E-value=2e-17  Score=97.82  Aligned_cols=89  Identities=28%  Similarity=0.603  Sum_probs=68.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||.+.... ++.++|+|++|++++++++|..||.............. ...+..+...+.++.+++.+||..+|++||
T Consensus       172 ~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (260)
T cd08222         172 MSPEALKHQG-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-GPTPSLPETYSRQLNSIMQSMLNKDPSLRP  249 (260)
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-CCCCCCcchhcHHHHHHHHHHhcCChhhCc
Confidence            4678764433 77899999999999999999999976544333333322 223344556788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++||||
T Consensus       250 ~~~~il~~~~~  260 (260)
T cd08222         250 SAAEILRNPFI  260 (260)
T ss_pred             CHHHHhhCCCC
Confidence            99999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.74  E-value=1.2e-17  Score=100.08  Aligned_cols=92  Identities=45%  Similarity=0.739  Sum_probs=70.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+|++|+++|++++|..||................... ......+..+.+++.+||..+|.+|
T Consensus       183 ~~PE~~~~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  261 (286)
T cd06614         183 MAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKR  261 (286)
T ss_pred             CCHhHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhC
Confidence            4788776544 7889999999999999999999998665444433332222211 1122367889999999999999999


Q ss_pred             CcHHHHhcCcccCC
Q 033880           80 PTAVKLLDHPFVKG   93 (109)
Q Consensus        80 ~~~~~~l~~~~~~~   93 (109)
                      |++.+++.|+|+..
T Consensus       262 pt~~~il~~~~~~~  275 (286)
T cd06614         262 PSAEELLQHPFLKK  275 (286)
T ss_pred             cCHHHHhhChHhhc
Confidence            99999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.74  E-value=2.2e-17  Score=97.52  Aligned_cols=94  Identities=34%  Similarity=0.472  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||+..... .+.++|+|++|++++++++|..||...................+.....+..+.+++.+||..+|++||
T Consensus       168 ~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  246 (265)
T cd05579         168 IAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRL  246 (265)
T ss_pred             cCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcC
Confidence            4678775544 788999999999999999999999766554444443332221111122388999999999999999999


Q ss_pred             cH---HHHhcCcccCCCC
Q 033880           81 TA---VKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~---~~~l~~~~~~~~~   95 (109)
                      ++   .++++|+||..+.
T Consensus       247 t~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         247 GAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             CCccHHHHhcCccccCCC
Confidence            99   9999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.74  E-value=7.4e-18  Score=107.23  Aligned_cols=94  Identities=33%  Similarity=0.573  Sum_probs=72.1

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---------------------------   54 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------   54 (109)
                      |||++.+.. |+.+.|+|||||+++||++|.+.|.+.+..+++..+..-...|                           
T Consensus       356 APEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~  434 (586)
T KOG0667|consen  356 APEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVE  434 (586)
T ss_pred             cchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeee
Confidence            899998876 9999999999999999999999998887766655441100000                           


Q ss_pred             -----------------------CCC-----------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           55 -----------------------TIP-----------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        55 -----------------------~~~-----------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                                             ..|           ......+.+|+.+|+.+||..|++..++++|||+++...
T Consensus       435 ~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~  510 (586)
T KOG0667|consen  435 TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSL  510 (586)
T ss_pred             ecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccc
Confidence                                   001           012345689999999999999999999999999996433

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.74  E-value=2.5e-17  Score=98.52  Aligned_cols=91  Identities=27%  Similarity=0.647  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---------------C----C-CCC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---------------S----K-ELP------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---------------~----~-~~~------   54 (109)
                      +|||++.....++.++|+||+|++++++++|..||.+............               .    . ..+      
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            5899887653588999999999999999999999876543322221100               0    0 000      


Q ss_pred             ----CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 ----TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                          ..+...+..+.+++.+||..+|++||+++++++|+||
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                0122347889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.73  E-value=1.9e-17  Score=98.16  Aligned_cols=91  Identities=41%  Similarity=0.825  Sum_probs=69.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||......   ............+..+...+..+.+++.+|+..+|+
T Consensus       175 ~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  253 (268)
T cd06630         175 MAPEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPE  253 (268)
T ss_pred             eCHhHhccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcc
Confidence            4788775544 788999999999999999999998644321   111222222223345566788999999999999999


Q ss_pred             CCCcHHHHhcCcccC
Q 033880           78 NRPTAVKLLDHPFVK   92 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~   92 (109)
                      +||++.++++||||+
T Consensus       254 ~R~~~~~ll~~~~~~  268 (268)
T cd06630         254 DRPPSRELLKHPVFR  268 (268)
T ss_pred             cCcCHHHHhcCcccC
Confidence            999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.73  E-value=8.3e-18  Score=100.32  Aligned_cols=92  Identities=41%  Similarity=0.710  Sum_probs=70.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..|+............... ..+......+..+.+++.+||..+|++||
T Consensus       168 ~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06642         168 MAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-SPPTLEGQYSKPFKEFVEACLNKDPRFRP  245 (277)
T ss_pred             cCHHHhCcCC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-CCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence            5788876544 788999999999999999999998755433333222211 22233445678899999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      ++.++++|+|+...
T Consensus       246 ~~~~il~~~~~~~~  259 (277)
T cd06642         246 TAKELLKHKFITRY  259 (277)
T ss_pred             CHHHHHHhHHHHHH
Confidence            99999999998753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=6.7e-18  Score=99.41  Aligned_cols=80  Identities=31%  Similarity=0.663  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-DDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      |+||.+.+++ |+.++|+||+||++|||+.-++||.+.+-. .+...+.+...++.| ...+.++..++..|+..+++.|
T Consensus       195 MSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~-~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~R  272 (375)
T KOG0591|consen  195 MSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLL-SLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQR  272 (375)
T ss_pred             cCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHH-HHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccC
Confidence            7999998766 999999999999999999999999987544 344444444555566 5678899999999999999999


Q ss_pred             CcH
Q 033880           80 PTA   82 (109)
Q Consensus        80 ~~~   82 (109)
                      |+.
T Consensus       273 P~t  275 (375)
T KOG0591|consen  273 PDT  275 (375)
T ss_pred             CCc
Confidence            984

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.73  E-value=1e-17  Score=100.67  Aligned_cols=95  Identities=32%  Similarity=0.546  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CC----------------CCCC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SK----------------ELPT------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~----------------~~~~------   55 (109)
                      ++||++.+...++.++|+||+|++++++++|..||..............   ..                ..+.      
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDL  249 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCH
Confidence            5788876544578899999999999999999999976543333322110   00                0000      


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                        .....+..+.+++.+|+..+|++||++.++++|+||+...
T Consensus       250 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        250 ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence              1124567889999999999999999999999999998754

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=1.6e-17  Score=95.64  Aligned_cols=91  Identities=25%  Similarity=0.521  Sum_probs=78.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||+..+.. ++..+|+|++|++.|+++.|.+||........+..+.....  .+|..++..+++++.+|+..+|.+|.
T Consensus       189 l~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~--~~p~~is~~a~dlI~~ll~~~p~~r~  265 (281)
T KOG0580|consen  189 LPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL--KFPSTISGGAADLISRLLVKNPIERL  265 (281)
T ss_pred             CCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc--cCCcccChhHHHHHHHHhccCccccc
Confidence            5799997665 99999999999999999999999987775555555555444  45788999999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      ...+++.|||+..+
T Consensus       266 ~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  266 ALTEVMDHPWIVAN  279 (281)
T ss_pred             cHHHHhhhHHHHhc
Confidence            99999999998754

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.73  E-value=1.1e-17  Score=102.44  Aligned_cols=85  Identities=25%  Similarity=0.380  Sum_probs=72.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      |++|.+.++. |+..+|+||||+++||+++ |+.||-..++.+....++.+.. ...|.+++.++..+|..||+..|++|
T Consensus       465 MslEal~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR-laQP~NCPDeLf~vMacCWallpeeR  542 (563)
T KOG1024|consen  465 MSLEALQNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR-LAQPFNCPDELFTVMACCWALLPEER  542 (563)
T ss_pred             cCHHHHhhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce-ecCCCCCcHHHHHHHHHHHhcCcccC
Confidence            6788887665 9999999999999999999 9999988887666655555443 45688999999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++..
T Consensus       543 Psf~Qlv~  550 (563)
T KOG1024|consen  543 PSFSQLVI  550 (563)
T ss_pred             CCHHHHHH
Confidence            99999864

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.73  E-value=2.3e-17  Score=99.89  Aligned_cols=94  Identities=34%  Similarity=0.627  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------------------   50 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------------   50 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||...............                              
T Consensus       165 ~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (308)
T cd06615         165 MSPERLQGTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELL  243 (308)
T ss_pred             cChhHhcCCC-CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHH
Confidence            4788875544 788999999999999999999998654322111111000                              


Q ss_pred             -----CCCCCCC-CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           51 -----KELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        51 -----~~~~~~~-~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                           ...+..+ ...+.++++++.+||..+|++||++.++++|+||....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  294 (308)
T cd06615         244 DYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE  294 (308)
T ss_pred             HHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence                 0001111 12567899999999999999999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.73  E-value=1.7e-18  Score=105.60  Aligned_cols=93  Identities=25%  Similarity=0.339  Sum_probs=70.9

Q ss_pred             CCCcceec-----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN-----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~-----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++..     ...++.++|+||+|+++|++++|..||...........+.........  ....+..+.+++..|+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~  249 (330)
T cd05601         170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC  249 (330)
T ss_pred             cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence            57888752     234778999999999999999999999876555444443332221112  23468889999999998


Q ss_pred             hCCCCCCcHHHHhcCcccCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~   94 (109)
                       +|++|+++++++.||||...
T Consensus       250 -~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         250 -GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             -ChhhCCCHHHHhCCCCcCCC
Confidence             99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=3.7e-17  Score=97.90  Aligned_cols=93  Identities=30%  Similarity=0.556  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-----------HHHHHhhCCCCCCCCCC-CCCHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-----------AAMFKIGNSKELPTIPD-DLSDEGKDFI   68 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~l~   68 (109)
                      +|||++.+.. ++.++|+||+||+++++++|..||......           ......... ..+..+. .++..+.+++
T Consensus       169 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li  246 (284)
T cd06620         169 MSPERIQGGK-YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPPRLPSSDFPEDLRDFV  246 (284)
T ss_pred             CCHHHHccCC-CCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCCCCCchhcCHHHHHHH
Confidence            5789876544 788999999999999999999999754321           111122211 1122222 3677899999


Q ss_pred             HHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           69 RLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        69 ~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      .+||..+|++||+++++++|+||....
T Consensus       247 ~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         247 DACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             HHHhcCCcccCcCHHHHhcCccccccc
Confidence            999999999999999999999986543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.73  E-value=1.8e-17  Score=99.08  Aligned_cols=86  Identities=22%  Similarity=0.392  Sum_probs=68.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..+...+..+.+++.+||..+|.+|
T Consensus       193 ~aPE~~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~R  270 (283)
T cd05048         193 MPPEAILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-QLLPCPEDCPARVYALMIECWNEIPARR  270 (283)
T ss_pred             cCHHHhccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHccCChhhC
Confidence            6899886555 8899999999999999998 99999876555444433333 3334566788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       271 p~~~~i~~~  279 (283)
T cd05048         271 PRFKDIHTR  279 (283)
T ss_pred             cCHHHHHHH
Confidence            999999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.73  E-value=7.2e-18  Score=109.12  Aligned_cols=87  Identities=28%  Similarity=0.537  Sum_probs=75.7

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |||.++... |+.++|+|++||++|||++ |.-|+.+......+..+.....+ +.+..++.+++++|+.||..+|.+||
T Consensus       283 aPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erL-pRPk~csedIY~imk~cWah~paDRp  360 (1039)
T KOG0199|consen  283 APESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERL-PRPKYCSEDIYQIMKNCWAHNPADRP  360 (1039)
T ss_pred             CHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccC-CCCCCChHHHHHHHHHhccCCccccc
Confidence            789997655 9999999999999999999 88999999988888888755544 45889999999999999999999999


Q ss_pred             cHHHHhcCcc
Q 033880           81 TAVKLLDHPF   90 (109)
Q Consensus        81 ~~~~~l~~~~   90 (109)
                      +|..+....+
T Consensus       361 tFsair~~~~  370 (1039)
T KOG0199|consen  361 TFSAIREDLV  370 (1039)
T ss_pred             cHHHHHHhHH
Confidence            9999864433

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.2e-17  Score=97.62  Aligned_cols=94  Identities=28%  Similarity=0.392  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||.+.+.. ++.++|+|++|++++++++|..||...........+.....  .......++..+.+++.+||..+|++
T Consensus       160 ~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  238 (260)
T cd05611         160 LAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAK  238 (260)
T ss_pred             cChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHH
Confidence            5788876555 78899999999999999999999977655444333322211  11223457889999999999999999


Q ss_pred             CC---cHHHHhcCcccCCCC
Q 033880           79 RP---TAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~---~~~~~l~~~~~~~~~   95 (109)
                      |+   ++++++.||||....
T Consensus       239 R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         239 RLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             ccCCCcHHHHHcChHhhcCC
Confidence            99   457999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.73  E-value=1.9e-17  Score=99.94  Aligned_cols=91  Identities=24%  Similarity=0.357  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--CCCC------------------CC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKEL------------------PT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~------------------~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..  +...                  +.     
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK  269 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchh
Confidence            5799876554478899999999999999999999876543322111100  0000                  00     


Q ss_pred             -----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 -----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                           .....+..+.+++.+||..+|.+||+++++++|+||
T Consensus       270 ~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                 011134667899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.73  E-value=2.4e-17  Score=100.86  Aligned_cols=96  Identities=28%  Similarity=0.451  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC------------------------CCCCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------------------SKELPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~------------------------~~~~~~-   55 (109)
                      +|||.+.+...++.++|+||+|++++++++|+.||.+.+.......+..                        ....+. 
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKV  255 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcc
Confidence            5899765544588899999999999999999999975433221111100                        000000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                          .....+..+.+++.+||..+|++||++.++++|+||.....
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         256 PWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             cHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence                01234667889999999999999999999999999986543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.73  E-value=3.8e-18  Score=104.00  Aligned_cols=91  Identities=24%  Similarity=0.379  Sum_probs=72.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||...+.............  ..+...+..+.+++.+|+..+|.+|+
T Consensus       163 ~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~ll~~~p~~R~  239 (325)
T cd05604         163 LAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL--VLRPGASLTAWSILEELLEKDRQRRL  239 (325)
T ss_pred             CCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc--cCCCCCCHHHHHHHHHHhccCHHhcC
Confidence            6899886654 88999999999999999999999987655544444433322  23455788899999999999999998


Q ss_pred             cH----HHHhcCcccCCC
Q 033880           81 TA----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~----~~~l~~~~~~~~   94 (109)
                      ++    .+++.|+||...
T Consensus       240 ~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         240 GAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CCCCCHHHHhcCCCcCCC
Confidence            66    589999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.73  E-value=3.2e-17  Score=98.01  Aligned_cols=94  Identities=26%  Similarity=0.444  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+...++.++|+||+|++++++++|..||......  ........ ...+..+...+..+.+++.+|+..+|.+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~l~~~p~~  240 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TMAVELPDSFSPELRSLLEGLLQRDVNR  240 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-ccCCCCCCcCCHHHHHHHHHHhhcCHHh
Confidence            58998865444788999999999999999999999765221  11111111 1122345567899999999999999999


Q ss_pred             CC-----cHHHHhcCcccCCCC
Q 033880           79 RP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~-----~~~~~l~~~~~~~~~   95 (109)
                      |+     ++.++++|+||+...
T Consensus       241 R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         241 RLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             ccCCCCCCHHHHHhCccccCCC
Confidence            99     999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.73  E-value=1.2e-17  Score=102.24  Aligned_cols=97  Identities=25%  Similarity=0.361  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh-----------------------C-CCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG-----------------------N-SKEL---   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~-----------------------~-~~~~---   53 (109)
                      +|||++.....++.++|+|++|++++++++|..||.+.+.......+.                       . ....   
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQ  254 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccccc
Confidence            578877654448889999999999999999999997543211111000                       0 0000   


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           54 --PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        54 --~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                        .......+..+.+++.+||..+|++||+++++++|+||......
T Consensus       255 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         255 SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence              00123467788999999999999999999999999999875433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.73  E-value=4.5e-17  Score=98.46  Aligned_cols=93  Identities=26%  Similarity=0.393  Sum_probs=70.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|++++++++|..||.+............... .+......+..+.+++.+||..+|++|
T Consensus       183 ~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  261 (305)
T cd05609         183 IAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLER  261 (305)
T ss_pred             cCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhc
Confidence            5788876544 88999999999999999999999976654443333332221 122223568889999999999999999


Q ss_pred             Cc---HHHHhcCcccCCC
Q 033880           80 PT---AVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~---~~~~l~~~~~~~~   94 (109)
                      |+   +.++++|+||...
T Consensus       262 ~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         262 LGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             cCccCHHHHHhCccccCC
Confidence            97   7889999999654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.8e-18  Score=105.52  Aligned_cols=93  Identities=37%  Similarity=0.553  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+...++.++|+||+||++|+|++|..||.+.........+...... ......+....+++.+||..+|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~~L~~~P~~R~  241 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR-FPKNVLSDEGRQFVKGLLNRNPQHRL  241 (330)
T ss_pred             cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC-CCCccCCHHHHHHHHHHcCCCHHHCC
Confidence            68998865555789999999999999999999999876544444333332221 11234678999999999999999998


Q ss_pred             ----cHHHHhcCcccCCC
Q 033880           81 ----TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ----~~~~~l~~~~~~~~   94 (109)
                          ++.++++|+||...
T Consensus       242 ~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         242 GAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                68999999999764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.73  E-value=3.5e-17  Score=96.24  Aligned_cols=89  Identities=34%  Similarity=0.676  Sum_probs=70.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||.+.... ++.++|+|++|++++++++|..||............... ..+..+...+..+.+++.+||..+|++||
T Consensus       170 ~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  247 (258)
T cd08215         170 LSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG-QYPPIPSQYSSELRNLVSSLLQKDPEERP  247 (258)
T ss_pred             cChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            4688765544 788999999999999999999999766544443333332 23345667889999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++||||
T Consensus       248 ~~~~ll~~~~~  258 (258)
T cd08215         248 SIAQILQSPFI  258 (258)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.73  E-value=3.5e-17  Score=98.70  Aligned_cols=94  Identities=39%  Similarity=0.605  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||...........+..... ........+..+.+++.+||..+|++|
T Consensus       184 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~R  262 (297)
T cd06659         184 MAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER  262 (297)
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccC
Confidence            5788886544 78899999999999999999999976554444333322211 112234567889999999999999999


Q ss_pred             CcHHHHhcCcccCCCC
Q 033880           80 PTAVKLLDHPFVKGAA   95 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~   95 (109)
                      |+++++++|+||....
T Consensus       263 ps~~~ll~~~~~~~~~  278 (297)
T cd06659         263 ATAQELLDHPFLLQTG  278 (297)
T ss_pred             cCHHHHhhChhhccCC
Confidence            9999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.73  E-value=2e-17  Score=99.17  Aligned_cols=93  Identities=27%  Similarity=0.495  Sum_probs=71.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh--hCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.........+  .........+...+..+.+++..||..+|++
T Consensus       168 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  246 (285)
T cd05632         168 MAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQ  246 (285)
T ss_pred             cChHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhH
Confidence            5899886554 888999999999999999999999765433221111  1111112345567888999999999999999


Q ss_pred             CCc-----HHHHhcCcccCCC
Q 033880           79 RPT-----AVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~-----~~~~l~~~~~~~~   94 (109)
                      |++     +.+++.|+||+..
T Consensus       247 R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         247 RLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             cCCCcccChHHHHcChhhhcC
Confidence            999     8899999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.73  E-value=7.6e-18  Score=104.62  Aligned_cols=93  Identities=30%  Similarity=0.445  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.........+.........  ....+....+++.+++ .+|.+
T Consensus       215 ~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~  292 (382)
T cd05625         215 IAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPED  292 (382)
T ss_pred             CCHHHhcCCC-CCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhH
Confidence            6899886655 889999999999999999999999876655444444332221122  3456888999998875 58999


Q ss_pred             CCc---HHHHhcCcccCCCC
Q 033880           79 RPT---AVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~---~~~~l~~~~~~~~~   95 (109)
                      |++   ++++++||||....
T Consensus       293 R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         293 RLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             cCCCCCHHHHhcCCCcCCcC
Confidence            987   99999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.73  E-value=1.6e-17  Score=101.35  Aligned_cols=93  Identities=24%  Similarity=0.453  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY------EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...      ............. ....+...+..+.+++.+||..
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         163 IAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-PIRIPRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             CCHHHHCCCC-CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHhcc
Confidence            5899886654 889999999999999999999999532      1112222222221 2235667889999999999999


Q ss_pred             CCCCCCc------HHHHhcCcccCCCC
Q 033880           75 NPLNRPT------AVKLLDHPFVKGAA   95 (109)
Q Consensus        75 ~p~~R~~------~~~~l~~~~~~~~~   95 (109)
                      +|++|++      +++++.|+||....
T Consensus       241 dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         241 DPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             CHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence            9999987      57999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.73  E-value=3.6e-17  Score=98.25  Aligned_cols=91  Identities=32%  Similarity=0.523  Sum_probs=66.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------C-----------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------K-----------   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------~-----------   51 (109)
                      +|||.+.+...++.++|+||+|++++++++|..||...........+...                  .           
T Consensus       173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ  252 (293)
T ss_pred             cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence            57898765444688999999999999999999998765433222111000                  0           


Q ss_pred             CCCCCCCC-CCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           52 ELPTIPDD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        52 ~~~~~~~~-~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      ....++.. .+....+++.+||..+|++||++.+++.|+||
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            00011222 47788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.8e-17  Score=97.11  Aligned_cols=90  Identities=42%  Similarity=0.695  Sum_probs=66.7

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---CCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---TIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ++||.+...  ..++.++|+|++|++++++++|..||..................+   ......+..+.+++.+||..+
T Consensus       168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  247 (262)
T cd06613         168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKD  247 (262)
T ss_pred             cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCC
Confidence            578887544  147889999999999999999999997665444333322221111   112334567899999999999


Q ss_pred             CCCCCcHHHHhcCcc
Q 033880           76 PLNRPTAVKLLDHPF   90 (109)
Q Consensus        76 p~~R~~~~~~l~~~~   90 (109)
                      |..||++++++.|+|
T Consensus       248 p~~Rpt~~~il~~~~  262 (262)
T cd06613         248 PKKRPTATKLLQHPF  262 (262)
T ss_pred             hhhCCCHHHHhcCCC
Confidence            999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.72  E-value=2.4e-17  Score=98.32  Aligned_cols=91  Identities=30%  Similarity=0.551  Sum_probs=66.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------   53 (109)
                      ++||.+.+...++.++|+|++|++++++++|+.+|...+..............                           
T Consensus       165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd05118         165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP  244 (283)
T ss_pred             cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccC
Confidence            47888765535889999999999999999999999765543332221110000                           


Q ss_pred             -CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           54 -PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        54 -~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                       .......+..+.+++.+||..+|.+||++++++.||||
T Consensus       245 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         245 LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence             00112356788999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.72  E-value=4.7e-17  Score=97.98  Aligned_cols=97  Identities=37%  Similarity=0.543  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC-CCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-KELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+|++|++++++++|..||.+............. ..........+....+++.+||..+|.+|
T Consensus       183 ~~pE~~~~~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R  261 (292)
T cd06657         183 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR  261 (292)
T ss_pred             cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccC
Confidence            4788775444 788999999999999999999999765443332222111 11111223467889999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcc
Q 033880           80 PTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~   98 (109)
                      |++.++++|+||.......
T Consensus       262 ~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         262 ATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             cCHHHHhcChHHhccCCCc
Confidence            9999999999999877533

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.72  E-value=3.2e-17  Score=95.67  Aligned_cols=96  Identities=28%  Similarity=0.434  Sum_probs=75.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------------------------   55 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (109)
                      |||.+.+...|+..+|+||.||++.|++-|.+-|.+....+++..+......|.                          
T Consensus       169 APELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~  248 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN  248 (318)
T ss_pred             ChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccc
Confidence            799998888899999999999999999999988888877776655422111110                          


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      .-...+.+..+|+.+++.++|.+|++++|+++|+||......
T Consensus       249 lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p  290 (318)
T KOG0659|consen  249 LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP  290 (318)
T ss_pred             ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence            112346677899999999999999999999999999965433

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.72  E-value=4e-18  Score=105.14  Aligned_cols=93  Identities=31%  Similarity=0.457  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.........+  ...+..+++++.+++ .+|.+
T Consensus       203 ~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~  280 (360)
T cd05627         203 IAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSEN  280 (360)
T ss_pred             cCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhh
Confidence            6899886655 8899999999999999999999998766555444443322111122  236788999999876 48999


Q ss_pred             CC---cHHHHhcCcccCCCC
Q 033880           79 RP---TAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~---~~~~~l~~~~~~~~~   95 (109)
                      |+   +++++++||||.+..
T Consensus       281 R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         281 RIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             cCCCCCHHHHhcCCCCCCCC
Confidence            98   589999999998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.72  E-value=4.2e-17  Score=99.11  Aligned_cols=94  Identities=37%  Similarity=0.647  Sum_probs=72.0

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.  ....++.++|+|++|++++++++|..||...........+.............+..+.+++.+||..+|.+
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  267 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQD  267 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCccc
Confidence            5788864  22347889999999999999999999987665544444444333322333456788999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++|+|+...
T Consensus       268 Rpt~~~il~~~~~~~~  283 (317)
T cd06635         268 RPTSEELLKHMFVLRE  283 (317)
T ss_pred             CcCHHHHHhChhhhcc
Confidence            9999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.72  E-value=4.4e-18  Score=105.46  Aligned_cols=92  Identities=28%  Similarity=0.403  Sum_probs=70.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.......  +.....+....+++.+|+ .+|.+
T Consensus       211 ~aPE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~  288 (376)
T cd05598         211 IAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAED  288 (376)
T ss_pred             cCHHHHcCCC-CCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhh
Confidence            6899886655 8899999999999999999999998766544443333222111  122356788999999876 58999


Q ss_pred             CC---cHHHHhcCcccCCC
Q 033880           79 RP---TAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~---~~~~~l~~~~~~~~   94 (109)
                      |+   ++.++++|+||++.
T Consensus       289 R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         289 RLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             cCCCCCHHHHhCCCCcCCC
Confidence            99   89999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.72  E-value=4e-17  Score=96.85  Aligned_cols=90  Identities=39%  Similarity=0.680  Sum_probs=64.9

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC-C--CCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT-I--PDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.  ....++.++|+||+|+++|++++|..||..................+. .  ....+..+.+++.+||..+
T Consensus       173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  252 (267)
T cd06645         173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN  252 (267)
T ss_pred             cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC
Confidence            5789864  123378899999999999999999999865443333222222211111 1  1235678999999999999


Q ss_pred             CCCCCcHHHHhcCcc
Q 033880           76 PLNRPTAVKLLDHPF   90 (109)
Q Consensus        76 p~~R~~~~~~l~~~~   90 (109)
                      |++||+++++++|||
T Consensus       253 P~~R~~~~~ll~~~~  267 (267)
T cd06645         253 PKKRPTAEKLLQHPF  267 (267)
T ss_pred             chhCcCHHHHhcCCC
Confidence            999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=4.4e-17  Score=97.71  Aligned_cols=95  Identities=35%  Similarity=0.638  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHhhCCCCCCCCC------CCCCHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE----GVAAMFKIGNSKELPTIP------DDLSDEGKDFIRL   70 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~   70 (109)
                      ++||.+.+.. ++.++|+|++|+++|++++|..||....    ..............+...      ...+..+.+++.+
T Consensus       170 ~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  248 (287)
T cd06621         170 MAPERIQGKP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQ  248 (287)
T ss_pred             cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHH
Confidence            4788775544 8889999999999999999999987541    111111111111111111      1235678999999


Q ss_pred             HhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           71 CLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        71 ~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      ||..+|++||++.++++|+||.....
T Consensus       249 ~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         249 CLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             HcCCCcccCCCHHHHHhCcccccccc
Confidence            99999999999999999999965443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.72  E-value=3.7e-17  Score=95.76  Aligned_cols=88  Identities=50%  Similarity=0.865  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCC--CCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD--LSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||.+.... ++.++|+|++|++++++++|..||.............. ...+..+..  .+..+.+++.+||..+|++
T Consensus       164 ~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  241 (253)
T cd05122         164 MAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEK  241 (253)
T ss_pred             cCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhh
Confidence            4788776544 78899999999999999999999976644433333322 122222222  3788999999999999999


Q ss_pred             CCcHHHHhcCcc
Q 033880           79 RPTAVKLLDHPF   90 (109)
Q Consensus        79 R~~~~~~l~~~~   90 (109)
                      ||++.++++|||
T Consensus       242 R~t~~~~l~~~~  253 (253)
T cd05122         242 RPTAEQLLKHPF  253 (253)
T ss_pred             CCCHHHHhcCCC
Confidence            999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.72  E-value=4.3e-17  Score=97.89  Aligned_cols=92  Identities=32%  Similarity=0.476  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||.+.+.. .+.++|+|++|++++++++|..||................  ...+...+..+++++.+||..+|++|+
T Consensus       165 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~  241 (290)
T cd05580         165 LAPEIILSKG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK--VRFPSFFSPDAKDLIRNLLQVDLTKRL  241 (290)
T ss_pred             cChhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--ccCCccCCHHHHHHHHHHccCCHHHcc
Confidence            5788876544 7889999999999999999999997665433333333222  244566789999999999999999998


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++|+||+...
T Consensus       242 ~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         242 GNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             CcccCCHHHHHcCcccccCC
Confidence                 899999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.72  E-value=1.9e-17  Score=101.95  Aligned_cols=92  Identities=26%  Similarity=0.393  Sum_probs=65.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------   53 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...+.......+......                           
T Consensus       184 ~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T cd07850         184 RAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYS  262 (353)
T ss_pred             cCHHHHhCCC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcc
Confidence            5789886654 889999999999999999999999765432222111000000                           


Q ss_pred             -----CC--C-------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           54 -----PT--I-------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        54 -----~~--~-------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                           +.  .       +...+..+.+++.+||..+|++||++.+++.|+|++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         263 FEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             hhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                 00  0       1123456789999999999999999999999998874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.72  E-value=5.9e-17  Score=95.76  Aligned_cols=85  Identities=22%  Similarity=0.337  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||...........+... ..+..+...+.++.+++.+||..+|++|
T Consensus       165 ~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~~~~~p~~R  242 (257)
T cd05116         165 YAPECMNYYK-FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG-ERMECPQRCPPEMYDLMKLCWTYGVDER  242 (257)
T ss_pred             cCHhHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHhccCchhC
Confidence            5788775444 7889999999999999998 99999866554444433333 3344567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++++|.+
T Consensus       243 p~~~~i~~  250 (257)
T cd05116         243 PGFAVVEL  250 (257)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=5.1e-17  Score=101.36  Aligned_cols=94  Identities=29%  Similarity=0.370  Sum_probs=64.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-------HHHHHHhh-------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-------VAAMFKIG-------------------------   48 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-------~~~~~~~~-------------------------   48 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.....       ...+..+.                         
T Consensus       250 ~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~  328 (391)
T PHA03212        250 NAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGL  328 (391)
T ss_pred             CChhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHH
Confidence            5899886654 89999999999999999999877532210       00000000                         


Q ss_pred             -CC-CCCC-CCC-----CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           49 -NS-KELP-TIP-----DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        49 -~~-~~~~-~~~-----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                       .. ...+ ..+     ...+.++.+++.+||..+|.+||+++++++|+||+...
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        329 AKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             HhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence             00 0000 000     12355788999999999999999999999999998753

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.72  E-value=2.4e-17  Score=101.01  Aligned_cols=87  Identities=23%  Similarity=0.355  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||+++++++ |..||.+...................+...+.++.+++.+||+.+|++|
T Consensus       242 ~aPE~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  320 (337)
T cd05054         242 MAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR  320 (337)
T ss_pred             cCcHHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence            5899886655 8999999999999999997 9999976443333322222222223355677889999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       321 Ps~~ell~~  329 (337)
T cd05054         321 PTFSELVEI  329 (337)
T ss_pred             cCHHHHHHH
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.72  E-value=4.8e-17  Score=97.32  Aligned_cols=91  Identities=40%  Similarity=0.652  Sum_probs=67.3

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++..    ...++.++|+||+|++++++++|..||.................. ...+...+..+.+++.+||..+
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  270 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKD  270 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCC
Confidence            57887742    123788999999999999999999998765544433332222111 1123345678999999999999


Q ss_pred             CCCCCcHHHHhcCccc
Q 033880           76 PLNRPTAVKLLDHPFV   91 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~   91 (109)
                      |++||++.++++|+||
T Consensus       271 p~~Rps~~ell~~~~~  286 (286)
T cd06638         271 YEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cccCCCHHHHhhcccC
Confidence            9999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.72  E-value=4e-17  Score=97.55  Aligned_cols=91  Identities=33%  Similarity=0.520  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC------------CC----CC---------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK------------EL----PT---------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~------------~~----~~---------   55 (109)
                      ++||++.+...++.++|+|++|++++++++|..||.+.........+....            ..    ..         
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDL  246 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHH
Confidence            578887655557889999999999999999999997654332222111000            00    00         


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                        .....+..+.+++.+|++.+|.+||++.++++|+||
T Consensus       247 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         247 QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence              012346678899999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.72  E-value=5e-17  Score=97.80  Aligned_cols=98  Identities=28%  Similarity=0.434  Sum_probs=69.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC---------------------CCCC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK---------------------ELPT----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~----   55 (109)
                      +|||.+.+...++.++|+|++|++++++++|.++|.+..............                     ..+.    
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLK  248 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchh
Confidence            478877554457889999999999999999987776544332221111000                     0000    


Q ss_pred             -CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           56 -IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        56 -~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                       .....+..+.+++.+||..+|++||++.++++|+||+......
T Consensus       249 ~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         249 QIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             hhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence             1123467788999999999999999999999999999865443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.72  E-value=1.3e-17  Score=101.44  Aligned_cols=91  Identities=23%  Similarity=0.374  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||...+.......+....  ...+...+..+.+++.+||+.+|.+|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         163 LAPEVLRKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP--LQLPGGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             CCHHHhcCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHccCCHhhcC
Confidence            5899886554 8899999999999999999999998765544444443332  234566788899999999999999998


Q ss_pred             cH----HHHhcCcccCCC
Q 033880           81 TA----VKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~----~~~l~~~~~~~~   94 (109)
                      ++    .++++|+||...
T Consensus       240 ~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         240 GAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCCCCHHHHhCCCCcCCC
Confidence            65    589999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.2e-17  Score=100.61  Aligned_cols=96  Identities=28%  Similarity=0.470  Sum_probs=77.9

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------------------------   55 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (109)
                      |||.+.+...|+.+.|+||.||++.||+.|++.|.|.+..+++..+..-...|.                          
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~  272 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK  272 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccccee
Confidence            899998888899999999999999999999999999877776655422111100                          


Q ss_pred             -CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 -IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 -~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                       .....+++..+|+.+++.++|.+|.++.+++.|+||......
T Consensus       273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence             123467889999999999999999999999999999865444

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.72  E-value=4.7e-17  Score=98.04  Aligned_cols=91  Identities=26%  Similarity=0.408  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CCCC---C--------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKEL---P--------------------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~~~---~--------------------   54 (109)
                      ++||++.+...++.++|+|++|++++++++|+.||...+.......+..   ....   +                    
T Consensus       184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRR  263 (302)
T ss_pred             cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccc
Confidence            5788776544478899999999999999999999976543332211111   0000   0                    


Q ss_pred             --CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 --TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 --~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                        ......+..+.+++.+||..+|++||++++++.|+||
T Consensus       264 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         264 LREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             hhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence              0012357889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.72  E-value=2.7e-17  Score=98.25  Aligned_cols=94  Identities=34%  Similarity=0.657  Sum_probs=69.2

Q ss_pred             CCCcceecC---CCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNS---SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIP-DDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~---~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+.   ..++.++|+|++|++++++++|..||..... ........... .+..+ ...+..+.+++.+||..+
T Consensus       170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP-SPQLPAEKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC-CCCCCccccCHHHHHHHHHHccCC
Confidence            478877531   2367899999999999999999999864322 22222222221 12222 346788999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~   95 (109)
                      |++||++++++.|+||....
T Consensus       249 p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         249 YKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             hhhCcCHHHHhcCchhhhcc
Confidence            99999999999999998764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.72  E-value=4.5e-17  Score=98.35  Aligned_cols=91  Identities=29%  Similarity=0.497  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CC------------------CCCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SK------------------ELPTI---   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~------------------~~~~~---   56 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..   ..                  .....   
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT  272 (311)
T ss_pred             CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc
Confidence            4788776544578899999999999999999999976543322221110   00                  00000   


Q ss_pred             ----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           57 ----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        57 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                          .......+.+++.+|+..+|++||++.+++.|+||
T Consensus       273 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         273 LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                01234678899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.72  E-value=5.3e-17  Score=96.69  Aligned_cols=88  Identities=28%  Similarity=0.565  Sum_probs=69.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||+..... .+.++|+|++|++++++++|..||........+.......  ...+...+....+++.+||..+|++||
T Consensus       189 ~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~  265 (280)
T cd05581         189 VSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE--YSFPPNFPPDAKDLIEKLLVLDPQDRL  265 (280)
T ss_pred             cCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC--CCCCCccCHHHHHHHHHHhcCCHhhCC
Confidence            4677765444 7889999999999999999999998665433333333222  234566788999999999999999999


Q ss_pred             cH----HHHhcCccc
Q 033880           81 TA----VKLLDHPFV   91 (109)
Q Consensus        81 ~~----~~~l~~~~~   91 (109)
                      ++    +++++|+||
T Consensus       266 ~~~~~~~~ll~~~~~  280 (280)
T cd05581         266 GVNEGYDELKAHPFF  280 (280)
T ss_pred             CcccCHHHHhcCCCC
Confidence            99    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=6.3e-17  Score=100.91  Aligned_cols=95  Identities=19%  Similarity=0.206  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhh-------------------------CCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIG-------------------------NSKE   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~-------------------------~~~~   52 (109)
                      +|||++.... ++.++|+||+||++|++++|..||.+....   ..+..+.                         ....
T Consensus       254 ~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (392)
T PHA03207        254 NSPELLALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVL  332 (392)
T ss_pred             cCHhHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccc
Confidence            5899886554 889999999999999999999998654211   1111000                         0000


Q ss_pred             CCCC-------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           53 LPTI-------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        53 ~~~~-------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .+..       ....+.++.+++.+||..+|++||++.+++.||||.....
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        333 RPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             cCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence            0000       0124567889999999999999999999999999986543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1e-16  Score=95.11  Aligned_cols=89  Identities=47%  Similarity=0.878  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. .+.++|+|++|++++++++|..||..................+..+...+..+.+++.+||.. +..||
T Consensus       176 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~-~~~r~  253 (264)
T cd06653         176 MSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFVE-EKRRP  253 (264)
T ss_pred             cCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhcC-cccCc
Confidence            5788886544 788999999999999999999999876555555554444444456777889999999999994 79999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.+++.|||.
T Consensus       254 ~~~~~~~~~~~  264 (264)
T cd06653         254 TAEFLLRHPFV  264 (264)
T ss_pred             cHHHHhcCCCC
Confidence            99999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.71  E-value=7.1e-17  Score=96.29  Aligned_cols=85  Identities=26%  Similarity=0.429  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+... .....+...+..+.+++.+||..+|++|
T Consensus       191 ~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  268 (280)
T cd05049         191 MPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG-RLLQRPRTCPSEVYDIMLGCWKRDPQQR  268 (280)
T ss_pred             cChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5899886655 8899999999999999998 99998765544443333322 2333456678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       269 p~~~eil~  276 (280)
T cd05049         269 INIKDIHE  276 (280)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.7e-17  Score=103.35  Aligned_cols=107  Identities=26%  Similarity=0.425  Sum_probs=89.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||.+.+.+ ++.++|+|++|+++||+++|.+||.+.++...+..+..+-....+|..++....++++++...+|..|.
T Consensus       586 VAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  586 VAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             ccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence            5899887766 999999999999999999999999999988888777777666677889999999999999999999997


Q ss_pred             -----cHHHHhcCcccCCCCC---cccccccccccc
Q 033880           81 -----TAVKLLDHPFVKGAAP---LERTILAPELSR  108 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~~---~~~~~~~~~~~~  108 (109)
                           ...++.+|.||.+-..   ..+.+.+|.+..
T Consensus       665 G~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~  700 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPS  700 (732)
T ss_pred             ccccCChHHHHhhhhhhcCChhhhhhccCCCCcccc
Confidence                 4889999999987533   344455555543

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.71  E-value=6.8e-17  Score=96.50  Aligned_cols=91  Identities=23%  Similarity=0.385  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---------------------C----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---------------------T----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~----   55 (109)
                      +|||.+.+...++.++|+|++|++++++++|..||...........+......+                     .    
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRR  247 (287)
T ss_pred             CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhH
Confidence            579977655457899999999999999999999997654433222211100000                     0    


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                          .....+..+.+++.+||..+|++||+++++++|+||
T Consensus       248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         248 LREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                001126788899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.71  E-value=1.2e-17  Score=101.78  Aligned_cols=91  Identities=23%  Similarity=0.398  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ..+...+..+.+++.+|++.+|.+|+
T Consensus       163 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         163 LAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             cCHHHHcCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            6899886654 88999999999999999999999987655444444333322  33456788999999999999999999


Q ss_pred             cHH----HHhcCcccCCC
Q 033880           81 TAV----KLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~----~~l~~~~~~~~   94 (109)
                      ++.    ++++|+||...
T Consensus       240 ~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         240 GAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             CCCCCHHHHhcCcccCCC
Confidence            765    78999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.71  E-value=4.3e-17  Score=98.67  Aligned_cols=91  Identities=30%  Similarity=0.524  Sum_probs=64.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH---------HHHHh---h--------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---------AMFKI---G--------------------   48 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~---------~~~~~---~--------------------   48 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.....         ....+   .                    
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  261 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTL  261 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhh
Confidence            578877654457889999999999999999999987543211         00000   0                    


Q ss_pred             -CCCCCCCCC-----------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           49 -NSKELPTIP-----------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        49 -~~~~~~~~~-----------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                       ........+           ...+..+.+++.+|+..+|++||++.+++.||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence             000000011           1345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.71  E-value=2.8e-17  Score=97.10  Aligned_cols=89  Identities=31%  Similarity=0.438  Sum_probs=69.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||++.... ++.++|+|++|+++|++++|..||.....  .......... .....+...+..+.+++.+||..+|.+
T Consensus       166 ~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~  243 (258)
T cd05578         166 MAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQK  243 (258)
T ss_pred             cCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhH
Confidence            4788876544 78999999999999999999999976543  2222222221 223456667899999999999999999


Q ss_pred             CCcH--HHHhcCccc
Q 033880           79 RPTA--VKLLDHPFV   91 (109)
Q Consensus        79 R~~~--~~~l~~~~~   91 (109)
                      |+++  ++++.|+||
T Consensus       244 R~~~~~~~l~~~~~~  258 (258)
T cd05578         244 RLGDNLKDLKNHPYF  258 (258)
T ss_pred             cCCccHHHHhcCCCC
Confidence            9999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.71  E-value=4.8e-17  Score=97.09  Aligned_cols=94  Identities=31%  Similarity=0.525  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh--hCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||++.+.. ++.++|+|++|++++++++|..||...........+  .........+...+..+.+++.+||..+|++
T Consensus       161 ~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (277)
T cd05577         161 MAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEK  239 (277)
T ss_pred             CCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhH
Confidence            4788876555 888999999999999999999999765331111111  1111122345567899999999999999999


Q ss_pred             CC-----cHHHHhcCcccCCCC
Q 033880           79 RP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~-----~~~~~l~~~~~~~~~   95 (109)
                      |+     ++.+++.|+||....
T Consensus       240 R~~~~~~~~~~ll~h~~~~~~~  261 (277)
T cd05577         240 RLGCRGGSADEVREHPLFKDLN  261 (277)
T ss_pred             ccCCCcccHHHHHhChhhhcCC
Confidence            99     888899999997543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.71  E-value=6.7e-17  Score=96.47  Aligned_cols=92  Identities=41%  Similarity=0.707  Sum_probs=71.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||.+.+.. .+.++|+|++|++++++++|..||...........+.. ...+......+..+.+++.+||..+|.+||
T Consensus       168 ~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  245 (277)
T cd06641         168 MAPEVIKQSA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSKPLKEFVEACLNKEPSFRP  245 (277)
T ss_pred             cChhhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-CCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence            4788775543 78899999999999999999999976554333333222 222334556788999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      ++.++++|+||...
T Consensus       246 ~~~~~l~~~~~~~~  259 (277)
T cd06641         246 TAKELLKHKFIVRF  259 (277)
T ss_pred             CHHHHHhCHHHhhh
Confidence            99999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.71  E-value=8.3e-17  Score=96.57  Aligned_cols=91  Identities=26%  Similarity=0.479  Sum_probs=63.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-hHHHHHHhhCCCCC--------------------C-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKEL--------------------P-----   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~--------------------~-----   54 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.... .......+......                    .     
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPR  249 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCCh
Confidence            578987654457889999999999999999999996544 11111111000000                    0     


Q ss_pred             ---CCCCCCC--HHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 ---TIPDDLS--DEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 ---~~~~~~~--~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                         .......  ....+++.+|+..+|++||++.++++|+||
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         250 PLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence               0001223  677899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=8e-17  Score=103.92  Aligned_cols=96  Identities=41%  Similarity=0.702  Sum_probs=79.0

Q ss_pred             CCCcceecC----CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNS----SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~----~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||+..+.    ..|+.++||||||+++.+|.-+.+|....++...+..+...... ...|...+..+.+|+++||..+
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Kn  276 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKN  276 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcC
Confidence            799988632    24899999999999999999999999888887777666554432 2235667889999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      |..||++.++++|||+.....
T Consensus       277 p~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  277 PRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             CccCCCHHHHhhCcccccCCc
Confidence            999999999999999986543

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.71  E-value=6.6e-17  Score=96.51  Aligned_cols=86  Identities=20%  Similarity=0.342  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+||+++++++ |..||.+............. .....+...+..+.+++.+||..+|++|
T Consensus       188 ~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~R  265 (277)
T cd05036         188 MPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDR  265 (277)
T ss_pred             CCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5789886544 8999999999999999997 98999865544333322222 2233456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++|
T Consensus       266 ps~~~vl~~  274 (277)
T cd05036         266 PNFATILER  274 (277)
T ss_pred             cCHHHHHHH
Confidence            999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=6e-17  Score=99.92  Aligned_cols=92  Identities=25%  Similarity=0.387  Sum_probs=61.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCC-CCCchhH---------HHHHHhhCC-CC-CCCC------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGV---------AAMFKIGNS-KE-LPTI------------   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p-~~~~~~~---------~~~~~~~~~-~~-~~~~------------   56 (109)
                      +|||++.+.. ++.++|+||+||++|+++++..+ |......         ..+..+... .. ...+            
T Consensus       223 ~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (357)
T PHA03209        223 NAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGF  301 (357)
T ss_pred             cCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHH
Confidence            5899986655 89999999999999999985444 4321110         001110000 00 0000            


Q ss_pred             ------------------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           57 ------------------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        57 ------------------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                                        ....+.+..+++.+||..+|++||++.++++||||+.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        302 IEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                              0123556677999999999999999999999999975

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.71  E-value=5.3e-17  Score=96.32  Aligned_cols=90  Identities=37%  Similarity=0.622  Sum_probs=64.5

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC---CCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT---IPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||.+..  ...++.++|+||+|++++++++|..||...........+......+.   .....+..+.+++.+||..+
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  252 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKN  252 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCC
Confidence            57887642  23367899999999999999999999865443332222211111111   12345788999999999999


Q ss_pred             CCCCCcHHHHhcCcc
Q 033880           76 PLNRPTAVKLLDHPF   90 (109)
Q Consensus        76 p~~R~~~~~~l~~~~   90 (109)
                      |++||+++++++|.|
T Consensus       253 P~~Rp~~~~il~~l~  267 (267)
T cd06646         253 PKKRPTAERLLTHLF  267 (267)
T ss_pred             hhhCcCHHHHhcCCC
Confidence            999999999999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.71  E-value=8.4e-17  Score=94.51  Aligned_cols=88  Identities=36%  Similarity=0.540  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||...+.. .+.++|+|++|++++++++|..||..............  .....+...+....+++.+||..+|+.||
T Consensus       160 ~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R~  236 (250)
T cd05123         160 LAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTKRL  236 (250)
T ss_pred             cChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhCC
Confidence            4688775544 78899999999999999999999976554333333322  22345667789999999999999999999


Q ss_pred             cH---HHHhcCccc
Q 033880           81 TA---VKLLDHPFV   91 (109)
Q Consensus        81 ~~---~~~l~~~~~   91 (109)
                      ++   ++++.|+||
T Consensus       237 ~~~~~~~l~~~~~f  250 (250)
T cd05123         237 GSGGAEEIKAHPFF  250 (250)
T ss_pred             CcccHHHHHhCCCC
Confidence            99   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.71  E-value=3.8e-17  Score=101.41  Aligned_cols=86  Identities=24%  Similarity=0.410  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||..................+..+...+.++.+++.+||..+|++|
T Consensus       281 ~aPE~~~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  359 (374)
T cd05106         281 MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTER  359 (374)
T ss_pred             eCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899886544 8999999999999999997 9999976554433333333322233455568899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       360 Ps~~~l~~  367 (374)
T cd05106         360 PTFSQISQ  367 (374)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.71  E-value=1.3e-16  Score=94.07  Aligned_cols=89  Identities=30%  Similarity=0.540  Sum_probs=69.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+.... .+..+...+..+.+++.+||..+|.+||
T Consensus       168 ~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~  245 (256)
T cd08221         168 MSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN-YTPVVSVYSSELISLVHSLLQQDPEKRP  245 (256)
T ss_pred             cCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-CCCCccccCHHHHHHHHHHcccCcccCC
Confidence            4788775544 7789999999999999999999998765544444443332 2233456788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      +++++++|+|+
T Consensus       246 s~~~ll~~~~l  256 (256)
T cd08221         246 TADEVLDQPLL  256 (256)
T ss_pred             CHHHHhhCcCC
Confidence            99999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.71  E-value=4.8e-17  Score=109.51  Aligned_cols=93  Identities=20%  Similarity=0.363  Sum_probs=70.9

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++... ..++.++|+|||||++|++++|..||...................+ ....+..+.+|+..||..+|.+|
T Consensus       208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeR  286 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKER  286 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHC
Confidence            689988532 3478899999999999999999999976554444333322221111 23457889999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      |++.+++.|+|+...
T Consensus       287 PSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        287 PSALQCLGYQIIKNV  301 (1021)
T ss_pred             cCHHHHhccHHHhhc
Confidence            999999999999754

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.71  E-value=4.7e-17  Score=99.49  Aligned_cols=99  Identities=25%  Similarity=0.348  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC------------------------CCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------------------SKELPTI   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~------------------------~~~~~~~   56 (109)
                      +|||++.+...++.++|+|++|++++++++|..||.+............                        .......
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPV  257 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCC
Confidence            4788876544478899999999999999999999976543222111000                        0000011


Q ss_pred             -----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           57 -----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        57 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                           ....+..+.+++.+||+.+|++||++.+++.||||.+......
T Consensus       258 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~  305 (334)
T cd07855         258 PWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD  305 (334)
T ss_pred             CHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence                 1335788999999999999999999999999999986544443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=1.4e-16  Score=95.22  Aligned_cols=91  Identities=33%  Similarity=0.621  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--------------------CC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--------------------LP------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~------   54 (109)
                      +|||++.....++.++|+||+|++++++++|..||.................                    .+      
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            5899876544578899999999999999999999876543333222111000                    00      


Q ss_pred             --CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           55 --TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        55 --~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                        ......+..+.+++.+||..+|++||++++++.|+||
T Consensus       245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence              0011225778999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.70  E-value=5.4e-17  Score=97.01  Aligned_cols=90  Identities=31%  Similarity=0.558  Sum_probs=64.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-----------------CCC--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-----------------LPT--------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~--------   55 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||.+.........+.....                 .+.        
T Consensus       173 ~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T cd07838         173 RAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS  251 (287)
T ss_pred             cChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhh
Confidence            4788876554 78899999999999999999999876544333222211000                 000        


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                      .....+....+++.+||..+|++||+++++++|+||
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         252 FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            001234667889999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.8e-16  Score=93.20  Aligned_cols=89  Identities=48%  Similarity=0.892  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||...... ++.++|+|++|++++++++|..||............... ..+..+...+..+.+++.+||..+|++||
T Consensus       166 ~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  243 (254)
T cd06627         166 MAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-DHPPLPEGISPELKDFLMQCFQKDPNLRP  243 (254)
T ss_pred             cCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHHhCChhhCc
Confidence            4788775544 788999999999999999999999766544444443322 23345667788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.+++.|+||
T Consensus       244 ~~~~~l~~~~~  254 (254)
T cd06627         244 TAKQLLKHPWI  254 (254)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.70  E-value=1.4e-16  Score=95.67  Aligned_cols=91  Identities=24%  Similarity=0.385  Sum_probs=64.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHhhCC--------------------CCCC-CC--
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNS--------------------KELP-TI--   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~--------------------~~~~-~~--   56 (109)
                      +|||++.+...++.++|+||+|++++++++|..||...... .........                    .... ..  
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ  249 (291)
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc
Confidence            57998765444788999999999999999999999754322 111111000                    0000 00  


Q ss_pred             -------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           57 -------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        57 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                             ....+..+.+++.+|+..+|++||++++++.||||
T Consensus       250 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         250 QLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                   01124678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.70  E-value=5.8e-17  Score=100.58  Aligned_cols=87  Identities=25%  Similarity=0.435  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||..................+..+...+.++.+++..||..+|++|
T Consensus       283 ~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  361 (375)
T cd05104         283 MAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKR  361 (375)
T ss_pred             eChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHC
Confidence            5899886654 8899999999999999998 8889876544444433333333233345567899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++.
T Consensus       362 Ps~~eil~~  370 (375)
T cd05104         362 PTFKQIVQL  370 (375)
T ss_pred             cCHHHHHHH
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.70  E-value=1.3e-16  Score=97.62  Aligned_cols=94  Identities=31%  Similarity=0.464  Sum_probs=67.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC--------------------------CCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--------------------------KEL-   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--------------------------~~~-   53 (109)
                      +|||++.+...++.++|+||+|++++++++|+.||.+.........+...                          ... 
T Consensus       179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRK  258 (337)
T ss_pred             cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccccc
Confidence            57898765455788999999999999999999999754332221111000                          000 


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           54 --PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        54 --~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                        .......+..+.+++.+||..+|++||++.++++|+|++..
T Consensus       259 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         259 PLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             chhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence              01112357789999999999999999999999999999765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.70  E-value=2e-16  Score=94.96  Aligned_cols=93  Identities=26%  Similarity=0.536  Sum_probs=71.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+............. .....+...+..+.+++.+||..+|++|
T Consensus       188 ~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  265 (288)
T cd05061         188 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-GYLDQPDNCPERVTDLMRMCWQFNPKMR  265 (288)
T ss_pred             cCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence            5788876544 8899999999999999998 78888766544433333222 2233455678899999999999999999


Q ss_pred             CcHHHHhc------CcccCCCC
Q 033880           80 PTAVKLLD------HPFVKGAA   95 (109)
Q Consensus        80 ~~~~~~l~------~~~~~~~~   95 (109)
                      |++.++++      |++|+++.
T Consensus       266 ps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         266 PTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             cCHHHHHHHHHhhcCCCCCCCC
Confidence            99999875      88888764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=8.9e-17  Score=95.85  Aligned_cols=91  Identities=37%  Similarity=0.614  Sum_probs=66.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-------------------CCCCCC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-------------------SKELPT------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-------------------~~~~~~------   55 (109)
                      +|||++.....++.++|+|++|++++++++|..||.+.........+..                   ....+.      
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDL  244 (282)
T ss_pred             CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccch
Confidence            5788876554588899999999999999999999976543332221110                   000000      


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCccc
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV   91 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   91 (109)
                        .....+..+.+++.+||..+|++||++++++.||||
T Consensus       245 ~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         245 EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence              011236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.2e-16  Score=98.75  Aligned_cols=92  Identities=25%  Similarity=0.445  Sum_probs=78.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||.+..+. |+.++|+|++|+++|||+.|++||.+.+....+..+.....  .+|..++.++.++.+..+...|.+|.
T Consensus       517 iAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv--syPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  517 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV--SYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             cccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence            6899887666 99999999999999999999999999887777766655544  56888999999999999999999997


Q ss_pred             c-----HHHHhcCcccCCCC
Q 033880           81 T-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~~   95 (109)
                      .     -+++..|+||+.+.
T Consensus       594 Gcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  594 GCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             CCCCccccchhhCcchhhcc
Confidence            4     35688999999763

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.69  E-value=1.6e-16  Score=97.55  Aligned_cols=97  Identities=28%  Similarity=0.399  Sum_probs=70.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC---------------------C------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---------------------L------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~------   53 (109)
                      ++||++.+...++.++|+|++|++++++++|..||...........+.....                     .      
T Consensus       182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKK  261 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcc
Confidence            4788876544478899999999999999999999976543322221110000                     0      


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           54 --PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        54 --~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                        .......+..+.+++.+|+..+|++||++.+++.|+||+.....
T Consensus       262 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         262 DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence              00123456778999999999999999999999999999875443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=8.6e-17  Score=100.47  Aligned_cols=98  Identities=26%  Similarity=0.371  Sum_probs=77.4

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------C-----------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------I-----------------   56 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~-----------------   56 (109)
                      |||.+.+...|+..+|+||+||++.||+.|++.|.+.....+++.+......|.        +                 
T Consensus       287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~  366 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR  366 (560)
T ss_pred             ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence            799999888899999999999999999999999999877777665532111110        0                 


Q ss_pred             --CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           57 --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        57 --~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                        -..++....+|+..+|..+|++|.++.++++++||........
T Consensus       367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~  411 (560)
T KOG0600|consen  367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCD  411 (560)
T ss_pred             HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCC
Confidence              1135677889999999999999999999999999965544433

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.69  E-value=1.4e-17  Score=98.68  Aligned_cols=85  Identities=28%  Similarity=0.544  Sum_probs=64.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||||++++++++ |..||...........+..... ...+..++..+.+++..||..+|++|
T Consensus       172 ~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~C~~~~p~~R  249 (259)
T PF07714_consen  172 LAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-LPIPDNCPKDIYSLIQQCWSHDPEKR  249 (259)
T ss_dssp             S-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-TTSBTTSBHHHHHHHHHHT-SSGGGS
T ss_pred             cccccccccc-cccccccccccccccccccccccccccccccccccccccccc-ceeccchhHHHHHHHHHHcCCChhhC
Confidence            5788876655 8999999999999999999 7789987655554444433332 34466788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       250 Ps~~~i~~  257 (259)
T PF07714_consen  250 PSFQEILQ  257 (259)
T ss_dssp             --HHHHHH
T ss_pred             cCHHHHHh
Confidence            99999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.69  E-value=1.7e-16  Score=94.28  Aligned_cols=85  Identities=20%  Similarity=0.355  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+... ...+.+..++..+.+++.+||..+|++|
T Consensus       175 ~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~R  252 (266)
T cd05064         175 AAPEAIQYHH-FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGER  252 (266)
T ss_pred             cCHHHHhhCC-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            5789876544 8899999999999999876 99999776554444433333 2234466788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       253 P~~~~i~~  260 (266)
T cd05064         253 PRFSQIHS  260 (266)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.69  E-value=2.8e-16  Score=92.81  Aligned_cols=85  Identities=26%  Similarity=0.341  Sum_probs=66.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||...........+.... .+..+...+..+.+++.+||..+|++|
T Consensus       168 ~aPE~~~~~~-~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~R  245 (256)
T cd05114         168 SPPEVFNFSK-YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRPKLASMTVYEVMYSCWHEKPEGR  245 (256)
T ss_pred             CChhhcccCc-cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHccCCcccC
Confidence            5799886544 8899999999999999999 889997766555544444332 223355567889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       246 ps~~~l~~  253 (256)
T cd05114         246 PTFAELLR  253 (256)
T ss_pred             cCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=2e-16  Score=95.58  Aligned_cols=86  Identities=26%  Similarity=0.460  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.....................+...+..+.+++.+||..+|++|
T Consensus       210 ~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  288 (302)
T cd05055         210 MAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKR  288 (302)
T ss_pred             CCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            5788876554 8889999999999999998 9999876554443333333322223345567899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       289 pt~~ell~  296 (302)
T cd05055         289 PTFKQIVQ  296 (302)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.69  E-value=2.1e-17  Score=97.46  Aligned_cols=91  Identities=33%  Similarity=0.536  Sum_probs=65.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch---hHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE---GVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.....++.++|+||+|++++++++|..||....   ..............  ..........+.+++.+||..+
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCC
Confidence            478887623448999999999999999999999998652   22221111111000  0011122378999999999999


Q ss_pred             CCCCCcHHHHhcCccc
Q 033880           76 PLNRPTAVKLLDHPFV   91 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~   91 (109)
                      |++||+++++++||||
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=1.3e-16  Score=101.29  Aligned_cols=92  Identities=27%  Similarity=0.407  Sum_probs=62.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCC-CCchh------HHHHHHhhCCCC-----CC--------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-SQYEG------VAAMFKIGNSKE-----LP--------------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~-~~~~~------~~~~~~~~~~~~-----~~--------------   54 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..++ .....      ......+.....     .+              
T Consensus       329 ~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~  407 (461)
T PHA03211        329 NAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHR  407 (461)
T ss_pred             cCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhh
Confidence            6899886654 899999999999999999876543 21100      111111111000     00              


Q ss_pred             -------CC----C---CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           55 -------TI----P---DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        55 -------~~----~---~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                             ..    +   ...+..+.+|+.+||..+|.+||++.|+++|+||+.
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        408 AARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                   00    0   123457889999999999999999999999999975

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.69  E-value=2.9e-16  Score=93.10  Aligned_cols=85  Identities=21%  Similarity=0.408  Sum_probs=66.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|+++|++++ |..||.+............. ..+..+...+..+.+++.+||..+|++|
T Consensus       172 ~aPE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  249 (263)
T cd05052         172 TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRMERPEGCPPKVYELMRACWQWNPSDR  249 (263)
T ss_pred             CCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHccCCcccC
Confidence            5788775544 8889999999999999998 88999776544443333322 2234466788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       250 p~~~~l~~  257 (263)
T cd05052         250 PSFAEIHQ  257 (263)
T ss_pred             CCHHHHHH
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.69  E-value=2.6e-16  Score=92.64  Aligned_cols=89  Identities=40%  Similarity=0.634  Sum_probs=69.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||.+.+.. ++.++|+|++|++++++++|..||.............. ...+..+...+.++.+++.+|+..+|++||
T Consensus       168 ~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (256)
T cd08530         168 MAPEVWKGRP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR-GKYPPIPPIYSQDLQNFIRSMLQVKPKLRP  245 (256)
T ss_pred             cCHHHHCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCCCCCchhhCHHHHHHHHHHcCCCcccCC
Confidence            4678775544 78899999999999999999999987654433333332 233344556788999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      ++.++++||+.
T Consensus       246 ~~~~~l~~p~~  256 (256)
T cd08530         246 NCDKILASPAV  256 (256)
T ss_pred             CHHHHhcCCCC
Confidence            99999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.68  E-value=7.8e-17  Score=98.52  Aligned_cols=95  Identities=28%  Similarity=0.452  Sum_probs=70.0

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC---CCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      ||||++..    ...++.++|+||+||++|++++|..||...........+.....   .+......+..+++++.+|+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~  249 (332)
T cd05623         170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLIC  249 (332)
T ss_pred             cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHcc
Confidence            68998752    23478899999999999999999999987665555544433221   122234568899999999886


Q ss_pred             hCCCC--CCcHHHHhcCcccCCCC
Q 033880           74 RNPLN--RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        74 ~~p~~--R~~~~~~l~~~~~~~~~   95 (109)
                      .++..  |++++++++|+||.+..
T Consensus       250 ~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         250 SREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             ChhhhcCCCCHHHHhCCCCcCCCC
Confidence            54443  67999999999998753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.68  E-value=6.7e-17  Score=100.19  Aligned_cols=95  Identities=26%  Similarity=0.421  Sum_probs=70.1

Q ss_pred             CCCcceecCC---CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS---GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~---~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++....   .++.++|+||+||++|+|++|..||.+.........+.........+  ...+..+++++..|+..+
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~  289 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDR  289 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCc
Confidence            6899886432   37789999999999999999999998766555444443322222223  345888999999999755


Q ss_pred             CC--CCCcHHHHhcCcccCCCC
Q 033880           76 PL--NRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~--~R~~~~~~l~~~~~~~~~   95 (109)
                      +.  .|+++.++++||||+...
T Consensus       290 ~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         290 EVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             hhccCCCCHHHHhcCcccCCCC
Confidence            43  388999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.68  E-value=1.2e-16  Score=99.02  Aligned_cols=95  Identities=28%  Similarity=0.395  Sum_probs=70.4

Q ss_pred             CCCcceecCC---CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS---GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~---~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++....   .++.++|+||+||++|+|++|..||.+.........+.........  ....+..+++++..|+..+
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~  289 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR  289 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCCh
Confidence            6899886432   3788999999999999999999999876655555444433222122  3457889999999999744


Q ss_pred             CC--CCCcHHHHhcCcccCCCC
Q 033880           76 PL--NRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~--~R~~~~~~l~~~~~~~~~   95 (109)
                      +.  .|++++++++|+||....
T Consensus       290 ~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         290 EVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             hhhcCCCCHHHHhcCcccCCCC
Confidence            33  278999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.68  E-value=3.9e-16  Score=94.06  Aligned_cols=86  Identities=22%  Similarity=0.381  Sum_probs=66.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||............... .....+...+..+.+++.+||..+|.+|
T Consensus       185 ~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  262 (297)
T cd05089         185 MAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYER  262 (297)
T ss_pred             cCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5789876544 8899999999999999997 99999766544443333322 2233455678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++.
T Consensus       263 p~~~~i~~~  271 (297)
T cd05089         263 PPFAQISVQ  271 (297)
T ss_pred             cCHHHHHHH
Confidence            999998653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.68  E-value=3.3e-16  Score=93.67  Aligned_cols=85  Identities=28%  Similarity=0.423  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||................ ....+...+..+.+++.+||..+|.+|
T Consensus       191 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~R  268 (280)
T cd05092         191 MPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQR  268 (280)
T ss_pred             cCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            4788876554 8899999999999999998 889987655444443333322 223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++.+
T Consensus       269 p~~~~l~~  276 (280)
T cd05092         269 MVIKDIHS  276 (280)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.68  E-value=3.5e-16  Score=92.31  Aligned_cols=86  Identities=29%  Similarity=0.529  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+||+|++++++++ |..||.....................+...+..+.+++.+||..+|++|
T Consensus       167 ~~pE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  245 (257)
T cd05040         167 CAPESLRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADR  245 (257)
T ss_pred             cCHHHhcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccC
Confidence            5788775544 8889999999999999998 9999976655444443332222233445677899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       246 ps~~~~~~  253 (257)
T cd05040         246 PTFAALRE  253 (257)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.68  E-value=3e-16  Score=95.93  Aligned_cols=94  Identities=23%  Similarity=0.402  Sum_probs=67.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---------------------------CCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---------------------------SKE-   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---------------------------~~~-   52 (109)
                      +|||++.+...++.++|+||+|++++++++|..||...+.......+..                           ... 
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKK  255 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCc
Confidence            5789775544478999999999999999999999876442221111000                           000 


Q ss_pred             -CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           53 -LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        53 -~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                       ........+..+.+++.+|+..+|++||++.+++.|+|++.-
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         256 PFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             chHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence             001122346789999999999999999999999999999743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.68  E-value=4.6e-16  Score=90.56  Aligned_cols=90  Identities=40%  Similarity=0.648  Sum_probs=66.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCC--CCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD--LSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~p~~   78 (109)
                      ++||...... ++.++|+|++|++++++++|..||........................  .+..+.+++.+|+..+|++
T Consensus       153 ~~pE~~~~~~-~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  231 (244)
T smart00220      153 MAPEVLLGKG-YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEK  231 (244)
T ss_pred             CCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchh
Confidence            4688775444 788999999999999999999999763323333222222221111111  7788999999999999999


Q ss_pred             CCcHHHHhcCccc
Q 033880           79 RPTAVKLLDHPFV   91 (109)
Q Consensus        79 R~~~~~~l~~~~~   91 (109)
                      ||++.++++|+||
T Consensus       232 Rp~~~~~~~~~~~  244 (244)
T smart00220      232 RLTAEEALQHPFF  244 (244)
T ss_pred             ccCHHHHhhCCCC
Confidence            9999999999996

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.68  E-value=3.1e-16  Score=96.38  Aligned_cols=96  Identities=24%  Similarity=0.341  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------------CCCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------------KELPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~-   55 (109)
                      +|||.+.+...++.++|+||+|++++++++|..||...........+...                        ...+. 
T Consensus       184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  263 (345)
T ss_pred             cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCc
Confidence            57887755444788999999999999999999999654332221111000                        00000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                          .....+..+.+++.+|+..+|++|+++.+++.|+||.....
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         264 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence                01134677899999999999999999999999999986433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.68  E-value=3.4e-16  Score=93.96  Aligned_cols=85  Identities=28%  Similarity=0.437  Sum_probs=65.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+.... ....+...+..+.+++.+||..+|.+|
T Consensus       189 ~aPE~~~~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  266 (288)
T cd05093         189 MPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-VLQRPRTCPKEVYDLMLGCWQREPHMR  266 (288)
T ss_pred             cCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5899886544 8899999999999999998 889987665444443333332 223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++++++.
T Consensus       267 pt~~~v~~  274 (288)
T cd05093         267 LNIKEIHS  274 (288)
T ss_pred             CCHHHHHH
Confidence            99999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.68  E-value=3.6e-16  Score=92.51  Aligned_cols=85  Identities=26%  Similarity=0.399  Sum_probs=65.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||...........+..... .+.....+..+.+++.+||..+|++|
T Consensus       171 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R  248 (261)
T cd05072         171 TAPEAINFGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-MPRMENCPDELYDIMKTCWKEKAEER  248 (261)
T ss_pred             CCHHHhccCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHccCCcccC
Confidence            5788876544 7889999999999999998 9999977654444444433322 22345678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++.+
T Consensus       249 p~~~~i~~  256 (261)
T cd05072         249 PTFDYLQS  256 (261)
T ss_pred             cCHHHHHH
Confidence            99999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.67  E-value=4.1e-16  Score=92.28  Aligned_cols=85  Identities=25%  Similarity=0.429  Sum_probs=63.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+...++.++|+||+|+++|++++| ..|+...............   ...+.....++.+++.+||+.+|++|
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R  247 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR---HQLPAPKWTELANLINQCMDYEPDFR  247 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc---ccCCCCCcHHHHHHHHHHhccChhhC
Confidence            6899887645578899999999999999997 4666554433322222211   23345566889999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++.
T Consensus       248 ps~~~il~~  256 (258)
T cd05078         248 PSFRAIIRD  256 (258)
T ss_pred             CCHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.67  E-value=4e-16  Score=93.74  Aligned_cols=85  Identities=27%  Similarity=0.422  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.............. ...+..+...+..+.+++.+||..+|++|
T Consensus       192 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~R  269 (291)
T cd05094         192 MPPESIMYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ-GRVLERPRVCPKEVYDIMLGCWQREPQQR  269 (291)
T ss_pred             cChHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC-CCCCCCCccCCHHHHHHHHHHcccChhhC
Confidence            5899886544 8889999999999999998 9999876554443333322 22233455678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       270 pt~~~v~~  277 (291)
T cd05094         270 LNIKEIYK  277 (291)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.67  E-value=4.3e-16  Score=93.16  Aligned_cols=85  Identities=25%  Similarity=0.414  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+... .....+..++..+.+++..||+.+|..|
T Consensus       193 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  270 (283)
T cd05091         193 MSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR-QVLPCPDDCPAWVYTLMLECWNEFPSRR  270 (283)
T ss_pred             cCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHhCCCcccC
Confidence            5889876544 8889999999999999998 88888776554444333333 3334567788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       271 P~~~~i~~  278 (283)
T cd05091         271 PRFKDIHS  278 (283)
T ss_pred             CCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.67  E-value=1.7e-16  Score=93.61  Aligned_cols=86  Identities=31%  Similarity=0.582  Sum_probs=67.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...+........... .....+...+..+.+++.+||..+|++||
T Consensus       167 ~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  244 (255)
T cd08219         167 VPPEIWENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG-SYKPLPSHYSYELRSLIKQMFKRNPRSRP  244 (255)
T ss_pred             cCHHHHccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC-CCCCCCcccCHHHHHHHHHHHhCCcccCC
Confidence            5788876544 888999999999999999999999876544443333333 22334566788899999999999999999


Q ss_pred             cHHHHhcC
Q 033880           81 TAVKLLDH   88 (109)
Q Consensus        81 ~~~~~l~~   88 (109)
                      ++.+++..
T Consensus       245 ~~~~il~~  252 (255)
T cd08219         245 SATTILSR  252 (255)
T ss_pred             CHHHHhhc
Confidence            99999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.67  E-value=2.1e-16  Score=92.55  Aligned_cols=84  Identities=33%  Similarity=0.417  Sum_probs=63.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||.+.... ++.++|+|++|++++++++|..++.......      ........+...+..+++++.+|+..+|++|+
T Consensus       149 ~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  221 (237)
T cd05576         149 CAPEVGGISE-ETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERL  221 (237)
T ss_pred             cCCcccCCCC-CCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccCCcccCCHHHHHHHHHHccCCHHHhc
Confidence            5899875544 7889999999999999999987765322110      00011123556788999999999999999999


Q ss_pred             cH-----HHHhcCccc
Q 033880           81 TA-----VKLLDHPFV   91 (109)
Q Consensus        81 ~~-----~~~l~~~~~   91 (109)
                      ++     ++++.||||
T Consensus       222 ~~~~~~~~~~~~h~~~  237 (237)
T cd05576         222 GAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCCccchHHHHcCCCC
Confidence            85     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.67  E-value=1.4e-16  Score=98.83  Aligned_cols=90  Identities=33%  Similarity=0.628  Sum_probs=75.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |+||.+.+.. |+.++|+|++||++|||++-+++|.+.+-......+.... ..+.+...+.+++.++..|+..+|+.||
T Consensus       173 mcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RP  250 (426)
T KOG0589|consen  173 MCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRP  250 (426)
T ss_pred             cCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCC
Confidence            6899887655 9999999999999999999999998876555544444333 4456788899999999999999999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      ++.+++.+|...
T Consensus       251 sa~~LL~~P~l~  262 (426)
T KOG0589|consen  251 SALELLRRPHLL  262 (426)
T ss_pred             CHHHHhhChhhh
Confidence            999999987655

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.67  E-value=4.1e-16  Score=92.12  Aligned_cols=85  Identities=25%  Similarity=0.434  Sum_probs=65.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+... .....+...+..+++++.+||..+|++|
T Consensus       165 ~aPE~~~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~R  242 (257)
T cd05060         165 YAPECINYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ERLPRPEECPQEIYSIMLSCWKYRPEDR  242 (257)
T ss_pred             cCHHHhcCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            4788875544 8889999999999999998 99999766544333333222 2234456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       243 p~~~~l~~  250 (257)
T cd05060         243 PTFSELES  250 (257)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.67  E-value=4.6e-16  Score=92.48  Aligned_cols=86  Identities=24%  Similarity=0.366  Sum_probs=65.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+||+|+++|++++ |..||.+.........+..... ...+...+..+.+++.+||..+|++|
T Consensus       181 ~~pe~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R  258 (272)
T cd05075         181 IAIESLADRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDR  258 (272)
T ss_pred             CCHHHccCCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            4677775544 8899999999999999999 8889977655444443333322 23455678889999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       259 ps~~~l~~~  267 (272)
T cd05075         259 PSFETLRCE  267 (272)
T ss_pred             cCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.67  E-value=4.5e-16  Score=93.54  Aligned_cols=94  Identities=30%  Similarity=0.458  Sum_probs=73.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--------------------CC-----
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--------------------TI-----   56 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~-----   56 (109)
                      |||.+.+...|+...|+||+||++.|++.+.+.|.+....+++..+......|                    ..     
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~l  324 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNL  324 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhh
Confidence            78999888889999999999999999999999998877666655542211110                    00     


Q ss_pred             ----CC-CCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           57 ----PD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        57 ----~~-~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                          +. ..+....+|+..++.+||.+|.++++.++|.||....
T Consensus       325 r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  325 RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             hhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence                00 1346778999999999999999999999999998743

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.67  E-value=6.8e-17  Score=95.95  Aligned_cols=99  Identities=27%  Similarity=0.459  Sum_probs=74.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH----HHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA----AMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      .|||++.... |+..+|+||+|+++|-+++|.+||.......    -..++..+...  .+-|...++..+++++.+|..
T Consensus       230 vaPevlg~eK-ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt  308 (400)
T KOG0604|consen  230 VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKT  308 (400)
T ss_pred             cCHHHhCchh-cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcC
Confidence            4789885554 9999999999999999999999996543211    11122222221  122456788999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCCCcccc
Q 033880           75 NPLNRPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      +|++|.++.+++.|||+.+.....+.
T Consensus       309 ~PteRlTI~~~m~hpwi~~~~~vp~t  334 (400)
T KOG0604|consen  309 EPTERLTIEEVMDHPWINQYEAVPQT  334 (400)
T ss_pred             CchhheeHHHhhcCchhcccccCCCC
Confidence            99999999999999999986555544

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.67  E-value=4.7e-16  Score=100.29  Aligned_cols=84  Identities=19%  Similarity=0.383  Sum_probs=69.4

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |||.+..+. ++.++|+|+||+++||+.+ |..||.+.+....+..+.. +..-..|..+++..++||..||.++|.+||
T Consensus       434 APEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk-gyRM~~PeGCPpkVYeLMraCW~WsPsDRP  511 (1157)
T KOG4278|consen  434 APESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK-GYRMDGPEGCPPKVYELMRACWNWSPSDRP  511 (1157)
T ss_pred             Ccccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-cccccCCCCCCHHHHHHHHHHhcCCcccCc
Confidence            788886555 8999999999999999988 8899999875555444333 333456889999999999999999999999


Q ss_pred             cHHHHhc
Q 033880           81 TAVKLLD   87 (109)
Q Consensus        81 ~~~~~l~   87 (109)
                      +|.++.+
T Consensus       512 sFaeiHq  518 (1157)
T KOG4278|consen  512 SFAEIHQ  518 (1157)
T ss_pred             cHHHHHH
Confidence            9999854

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=3.2e-16  Score=95.82  Aligned_cols=94  Identities=32%  Similarity=0.480  Sum_probs=68.0

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC---CCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---LPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      ||||++..    ...++.++|+||+||++|++++|..||.+.........+.....   .+......+..+++++.+|+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~  249 (331)
T cd05597         170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLIC  249 (331)
T ss_pred             cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHcc
Confidence            68898752    23477899999999999999999999987654444433332221   122233468899999999886


Q ss_pred             hCCC--CCCcHHHHhcCcccCCC
Q 033880           74 RNPL--NRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~--~R~~~~~~l~~~~~~~~   94 (109)
                      .+++  .|+++++++.|+||.+.
T Consensus       250 ~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         250 SPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CcccccCCCCHHHHhcCCCCCCC
Confidence            5443  37899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.67  E-value=8.7e-16  Score=93.87  Aligned_cols=97  Identities=25%  Similarity=0.365  Sum_probs=68.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh------------------------CCCCCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG------------------------NSKELPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~------------------------~~~~~~~-   55 (109)
                      ++||.+.....++.++|+|++|++++++++|..||...........+.                        ....... 
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPV  251 (328)
T ss_pred             cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCC
Confidence            579987654458899999999999999999999997543321111000                        0000000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                          .....+..+.+++.+||..+|++||++++++.|+|+......
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             cHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence                012356789999999999999999999999999999754433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.67  E-value=3.6e-16  Score=92.88  Aligned_cols=86  Identities=27%  Similarity=0.436  Sum_probs=66.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+............. ..+..+...+..+.+++.+||..+|++|
T Consensus       182 ~~pe~~~~~~-~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  259 (273)
T cd05035         182 IAIESLADRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-NRLKQPEDCLDELYDLMYSCWRADPKDR  259 (273)
T ss_pred             cCHhhcccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcCCCHHHHHHHHHHcCCChhhC
Confidence            4788775444 8899999999999999998 88898776554444333333 2334566788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       260 p~~~e~~~~  268 (273)
T cd05035         260 PTFTKLREV  268 (273)
T ss_pred             cCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.7e-16  Score=106.56  Aligned_cols=107  Identities=29%  Similarity=0.393  Sum_probs=81.2

Q ss_pred             CCCcceec---C-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKN---S-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~---~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~   74 (109)
                      ++||++..   . +.|+.-+|+||+|+++|||++|..||....-...+..+........+|  ...+..+++||..++..
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~  322 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCD  322 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcC
Confidence            57888762   2 358999999999999999999999998877666666554443333344  55889999999988765


Q ss_pred             CCCCCCc---HHHHhcCcccCCCCCcccc-cccccccc
Q 033880           75 NPLNRPT---AVKLLDHPFVKGAAPLERT-ILAPELSR  108 (109)
Q Consensus        75 ~p~~R~~---~~~~l~~~~~~~~~~~~~~-~~~~~~~~  108 (109)
                       |+.|.+   ++++..||||.+.....-. ..+|.++.
T Consensus       323 -~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPe  359 (1317)
T KOG0612|consen  323 -REVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPE  359 (1317)
T ss_pred             -hhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCc
Confidence             778877   9999999999998774432 55555554

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.66  E-value=6.1e-16  Score=92.57  Aligned_cols=86  Identities=21%  Similarity=0.386  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+............. .....+...+..+.+++.+||..+|++|
T Consensus       193 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  270 (283)
T cd05090         193 MPPEAIMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRR  270 (283)
T ss_pred             cChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            5788876544 8899999999999999998 88898765543333333222 2234466778999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++.++
T Consensus       271 p~~~~i~~~  279 (283)
T cd05090         271 PRFKDIHTR  279 (283)
T ss_pred             cCHHHHHHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.66  E-value=5.6e-16  Score=92.46  Aligned_cols=86  Identities=27%  Similarity=0.514  Sum_probs=66.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|++++++++ |..||.+............. ..+..+...+..+.+++.+||..+|++|
T Consensus       188 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  265 (277)
T cd05062         188 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMR  265 (277)
T ss_pred             cChhHhhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899886544 8899999999999999998 78888776544433333322 2234456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       266 ps~~e~l~~  274 (277)
T cd05062         266 PSFLEIISS  274 (277)
T ss_pred             cCHHHHHHH
Confidence            999998754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.66  E-value=5.7e-16  Score=91.96  Aligned_cols=85  Identities=21%  Similarity=0.450  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||...........+... .....+...+..+.+++.+||..+|++|
T Consensus       180 ~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  257 (269)
T cd05044         180 MAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GRLQKPENCPDKIYQLMTNCWAQDPSER  257 (269)
T ss_pred             cCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-CccCCcccchHHHHHHHHHHcCCCcccC
Confidence            5788886554 8899999999999999998 99999765544433333222 2223455678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       258 p~~~~i~~  265 (269)
T cd05044         258 PTFDRIQE  265 (269)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.66  E-value=8.3e-16  Score=91.27  Aligned_cols=85  Identities=24%  Similarity=0.390  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+||+|+++|++++ |..||...........+... ...+.+...+..+.+++.+||..+|++|
T Consensus       177 ~~PE~~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~R  254 (268)
T cd05063         177 TAPEAIAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDRARR  254 (268)
T ss_pred             cCHHHhhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5788775544 7899999999999999987 99999765544444444332 2223345578899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       255 p~~~~i~~  262 (268)
T cd05063         255 PRFVDIVN  262 (268)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.66  E-value=7.5e-16  Score=91.15  Aligned_cols=85  Identities=22%  Similarity=0.386  Sum_probs=63.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |.+||............... ..+..+...+..+.+++.+||..+|++|
T Consensus       169 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  246 (262)
T cd05058         169 MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-RRLLQPEYCPDPLYEVMLSCWHPKPEMR  246 (262)
T ss_pred             cChhHhccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHcCCChhhC
Confidence            5788775544 8889999999999999999 56677655444333333322 2223345567889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       247 p~~~~il~  254 (262)
T cd05058         247 PTFSELVS  254 (262)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.66  E-value=7.7e-16  Score=91.30  Aligned_cols=87  Identities=25%  Similarity=0.528  Sum_probs=63.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTI-PDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||..... .............++. ....+..+.+++.+||..+|++
T Consensus       173 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  251 (267)
T cd08228         173 MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQ  251 (267)
T ss_pred             cChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCccc
Confidence            5899886554 78899999999999999999999864422 1222222222222222 2346788999999999999999


Q ss_pred             CCcHHHHhcC
Q 033880           79 RPTAVKLLDH   88 (109)
Q Consensus        79 R~~~~~~l~~   88 (109)
                      ||++.++++.
T Consensus       252 Rp~~~~vl~~  261 (267)
T cd08228         252 RPDIGYVHQI  261 (267)
T ss_pred             CcCHHHHHHH
Confidence            9999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=5.2e-16  Score=92.48  Aligned_cols=85  Identities=28%  Similarity=0.536  Sum_probs=66.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|++++++++ |..||.+........... ....+..+...+..+.+++.+||..+|++|
T Consensus       188 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  265 (277)
T cd05032         188 MAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMR  265 (277)
T ss_pred             cCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            4788876544 8889999999999999998 889997655444443333 333334566778999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.+++.
T Consensus       266 pt~~~l~~  273 (277)
T cd05032         266 PTFLEIVS  273 (277)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.66  E-value=9.1e-16  Score=90.38  Aligned_cols=85  Identities=19%  Similarity=0.323  Sum_probs=64.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|+++|++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       163 ~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  240 (252)
T cd05084         163 TAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-VRLPCPELCPDAVYRLMERCWEYDPGQR  240 (252)
T ss_pred             cCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-CCCCCcccCCHHHHHHHHHHcCCChhhC
Confidence            5788876554 8889999999999999998 88888655443333333222 2223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       241 ps~~~~~~  248 (252)
T cd05084         241 PSFSTVHQ  248 (252)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.66  E-value=6.4e-16  Score=91.08  Aligned_cols=86  Identities=26%  Similarity=0.432  Sum_probs=67.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.... ++.++|+|++|++++++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  251 (262)
T cd00192         174 MAPESLKDGI-FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDR  251 (262)
T ss_pred             cCHHHhccCC-cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccC
Confidence            5788876554 8899999999999999998 68999877554444444332 2334466678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       252 ps~~~l~~~  260 (262)
T cd00192         252 PTFSELVER  260 (262)
T ss_pred             cCHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.66  E-value=6.1e-16  Score=92.39  Aligned_cols=85  Identities=24%  Similarity=0.375  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.............. ......+...+..+.+++.+||..+|+.|
T Consensus       186 ~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R  263 (280)
T cd05043         186 MALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD-GYRLAQPINCPDELFAVMACCWALDPEER  263 (280)
T ss_pred             cCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhhC
Confidence            5788876544 8899999999999999998 9999976654433332222 22223345568899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       264 ps~~~~~~  271 (280)
T cd05043         264 PSFSQLVQ  271 (280)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.7e-15  Score=89.72  Aligned_cols=85  Identities=22%  Similarity=0.368  Sum_probs=66.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+.... ....+...+..+.+++.+|+..+|++|
T Consensus       171 ~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R  248 (261)
T cd05068         171 TAPEAALYNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMPCPPGCPKELYDIMLDCWKEDPDDR  248 (261)
T ss_pred             cCccccccCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHhhcCcccC
Confidence            5789876544 8899999999999999999 999998765544444433332 223455678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++.+
T Consensus       249 p~~~~l~~  256 (261)
T cd05068         249 PTFETLQW  256 (261)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.65  E-value=5.4e-16  Score=93.04  Aligned_cols=96  Identities=32%  Similarity=0.558  Sum_probs=75.0

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC----------------CCC--------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP----------------TIP--------   57 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------~~~--------   57 (109)
                      |||++.+...|+..+|+||+||+++||+++++.|.+....++...+......|                .++        
T Consensus       188 aPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l  267 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDL  267 (323)
T ss_pred             CHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccch
Confidence            79999888779999999999999999999999999887766665542211111                000        


Q ss_pred             ----CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           58 ----DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        58 ----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                          .....+..+++.+|++.+|.+|.+++.++.|+||......
T Consensus       268 ~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~  311 (323)
T KOG0594|consen  268 SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK  311 (323)
T ss_pred             HHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence                1122478899999999999999999999999999986443

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.65  E-value=8.7e-16  Score=90.90  Aligned_cols=85  Identities=24%  Similarity=0.357  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||...........+... ..+..+...+..+.+++.+||..+|++|
T Consensus       165 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~c~~~~~~~R  242 (257)
T cd05115         165 YAPECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-KRLDCPAECPPEMYALMKDCWIYKWEDR  242 (257)
T ss_pred             CCHHHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5788776544 7889999999999999996 99999776554444333332 2234456678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       243 p~~~~i~~  250 (257)
T cd05115         243 PNFAKVEE  250 (257)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.65  E-value=1.2e-15  Score=90.57  Aligned_cols=86  Identities=26%  Similarity=0.487  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||++.+.. ++.++|+||+|+++|++++|..||..................+......+..+.+++.+||..+|++||
T Consensus       180 ~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  258 (269)
T cd08528         180 SCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARP  258 (269)
T ss_pred             cChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCC
Confidence            4788886544 889999999999999999999999765544433333333222222235678999999999999999999


Q ss_pred             cHHHHhc
Q 033880           81 TAVKLLD   87 (109)
Q Consensus        81 ~~~~~l~   87 (109)
                      ++.++..
T Consensus       259 ~~~e~~~  265 (269)
T cd08528         259 DIIQVSA  265 (269)
T ss_pred             CHHHHHH
Confidence            9999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.65  E-value=9.1e-16  Score=90.75  Aligned_cols=86  Identities=22%  Similarity=0.385  Sum_probs=65.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+||+|+++|++++ |..||...........+..... ...+...+..+.+++.+||..+|++|
T Consensus       168 ~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05113         168 SPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-LYRPHLASEKVYAIMYSCWHEKAEER  245 (256)
T ss_pred             CCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            4688775544 7889999999999999998 9999876554443333333222 23345567899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++.+
T Consensus       246 p~~~~ll~~  254 (256)
T cd05113         246 PTFQQLLSS  254 (256)
T ss_pred             CCHHHHHHh
Confidence            999999754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.65  E-value=5.9e-16  Score=96.88  Aligned_cols=86  Identities=26%  Similarity=0.389  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||..................+..+...+..+.+++.+||..+|++|
T Consensus       306 ~aPE~~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  384 (400)
T cd05105         306 MAPESIFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR  384 (400)
T ss_pred             EChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence            5899886554 8899999999999999997 8889876543333333222322334456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       385 Pt~~~l~~  392 (400)
T cd05105         385 PSFLHLSD  392 (400)
T ss_pred             cCHHHHHH
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.65  E-value=8.2e-16  Score=93.43  Aligned_cols=86  Identities=23%  Similarity=0.246  Sum_probs=66.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+...... ..+.......+.+..++....+++.+||..+|++|
T Consensus       178 ~apE~~~~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  255 (316)
T cd05108         178 MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR  255 (316)
T ss_pred             cChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5788886554 8899999999999999987 9999976543332 23333333333456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++.+
T Consensus       256 ps~~~l~~~  264 (316)
T cd05108         256 PKFRELIIE  264 (316)
T ss_pred             cCHHHHHHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=3.8e-17  Score=110.76  Aligned_cols=97  Identities=46%  Similarity=0.771  Sum_probs=81.4

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.  .+...+.||||+||++.||.+|+.|+...+...+.......+..|..|..++...++|+.+|+.-||+.
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~ 1484 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKM 1484 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchh
Confidence            899999853  357789999999999999999999998777666654444455567788889999999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCc
Q 033880           79 RPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~   97 (109)
                      |..+.|++.|.|-....+.
T Consensus      1485 Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1485 RWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             hhHHHHHHHhhcccccccc
Confidence            9999999999987765443

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.65  E-value=1.2e-15  Score=90.29  Aligned_cols=84  Identities=21%  Similarity=0.387  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+... ...+.+...+..+.+++.+||..+|++|
T Consensus       170 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05070         170 TAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPCPQDCPISLHELMLQCWKKDPEER  247 (260)
T ss_pred             cChHHHhcCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccC
Confidence            5788775544 7889999999999999999 88899776554444443332 2233456678899999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |++.++.
T Consensus       248 pt~~~l~  254 (260)
T cd05070         248 PTFEYLQ  254 (260)
T ss_pred             cCHHHHH
Confidence            9999886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.65  E-value=1.2e-16  Score=92.61  Aligned_cols=86  Identities=28%  Similarity=0.436  Sum_probs=62.3

Q ss_pred             CCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            2 APEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         2 apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      |||.+.-.  ...+.++||||+||++|+++.|..||.-....  +......+.....+.....++...++++.|++.+|.
T Consensus       206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~  285 (302)
T KOG2345|consen  206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPN  285 (302)
T ss_pred             CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcc
Confidence            78988632  34689999999999999999999999643221  111122222222222344789999999999999999


Q ss_pred             CCCcHHHHhc
Q 033880           78 NRPTAVKLLD   87 (109)
Q Consensus        78 ~R~~~~~~l~   87 (109)
                      +||++.+++.
T Consensus       286 qRP~i~~ll~  295 (302)
T KOG2345|consen  286 QRPTIPELLS  295 (302)
T ss_pred             cCCCHHHHHH
Confidence            9999999874

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.65  E-value=1.4e-15  Score=89.99  Aligned_cols=85  Identities=20%  Similarity=0.412  Sum_probs=65.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||+..+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..+...+..+.+++.+||..+|++|
T Consensus       170 ~~Pe~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05069         170 TAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMPCPQGCPESLHELMKLCWKKDPDER  247 (260)
T ss_pred             CCHHHhccCC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHHHHHHHccCCcccC
Confidence            5788775544 7889999999999999999 88999876554444433332 2223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       248 p~~~~i~~  255 (260)
T cd05069         248 PTFEYIQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=2.7e-16  Score=100.13  Aligned_cols=91  Identities=32%  Similarity=0.519  Sum_probs=74.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC-CCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT-IPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++. .. |+..+||||||+++.||.++..||..-...-+.++....+..|. +..-..+++++|+.+|+.. .+.|
T Consensus       211 MAPEmYE-E~-YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R  287 (632)
T KOG0584|consen  211 MAPEMYE-EN-YNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSER  287 (632)
T ss_pred             cChHHHh-hh-cchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhc
Confidence            8999985 34 99999999999999999999999987655555555555555442 3334578899999999999 8899


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      +++.++|.|+||...
T Consensus       288 ~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  288 LSAKELLKDPFFDED  302 (632)
T ss_pred             cCHHHHhhChhhccc
Confidence            999999999999875

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.65  E-value=1.1e-15  Score=90.40  Aligned_cols=85  Identities=22%  Similarity=0.350  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+|++|++++++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       171 ~~PE~~~~~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R  248 (261)
T cd05148         171 TAPEAASHGT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDR  248 (261)
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            4688775544 8889999999999999998 88999766544444433322 2234456778999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       249 pt~~~l~~  256 (261)
T cd05148         249 PSFKALRE  256 (261)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.65  E-value=1.3e-15  Score=89.83  Aligned_cols=86  Identities=23%  Similarity=0.385  Sum_probs=64.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|+++|++++ |..||...........+..... ...+...+..+.+++.+||..+|++|
T Consensus       168 ~aPe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R  245 (256)
T cd05112         168 SSPEVFSFSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR-LYKPRLASQSVYELMQHCWKERPEDR  245 (256)
T ss_pred             cCHhHhccCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHHcccChhhC
Confidence            4788876544 8889999999999999998 8899876544433333322211 12245568899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++.
T Consensus       246 p~~~~~l~~  254 (256)
T cd05112         246 PSFSLLLHQ  254 (256)
T ss_pred             CCHHHHHHh
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.65  E-value=1.6e-15  Score=89.21  Aligned_cols=85  Identities=21%  Similarity=0.348  Sum_probs=65.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||................ ....+...+..+.+++.+||..+|++|
T Consensus       161 ~aPE~~~~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         161 TAPEALNYGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-RMSCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             cCHHHhccCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            5788875544 7889999999999999998 889997665444433333322 223455678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++.+
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.65  E-value=1.1e-15  Score=90.75  Aligned_cols=85  Identities=21%  Similarity=0.383  Sum_probs=61.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.....++.++|+||+|+++|+++. |..|+......... .......  ........++.+++.+||..+|++|
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~R  251 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQC--MLVTPSCKELADLMTHCMNYDPNQR  251 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCc--cCCCCChHHHHHHHHHHcCCChhhC
Confidence            689988654558899999999999999985 87887654322221 1111111  1122345788999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       252 p~~~~il~~  260 (262)
T cd05077         252 PFFRAIMRD  260 (262)
T ss_pred             cCHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.65  E-value=1.4e-15  Score=91.25  Aligned_cols=85  Identities=21%  Similarity=0.447  Sum_probs=64.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       199 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  276 (288)
T cd05050         199 MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDR  276 (288)
T ss_pred             cCHHHHhcCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            4788775544 8899999999999999997 778887655444443333332 223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       277 pt~~el~~  284 (288)
T cd05050         277 PSFASINR  284 (288)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.64  E-value=1.5e-15  Score=89.70  Aligned_cols=86  Identities=23%  Similarity=0.391  Sum_probs=66.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|+++|++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       168 ~~Pe~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05059         168 APPEVFDYSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDR  245 (256)
T ss_pred             cCHHHhccCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            5788776544 8889999999999999998 88898765544444333322 2223455678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++.
T Consensus       246 pt~~~~l~~  254 (256)
T cd05059         246 PAFKKLLSQ  254 (256)
T ss_pred             cCHHHHHHH
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.64  E-value=2.5e-17  Score=99.85  Aligned_cols=93  Identities=27%  Similarity=0.380  Sum_probs=67.5

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh--hCCCCCC-------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELP-------------------------   54 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~-------------------------   54 (109)
                      |||++.+.+ .+..+|+||+||+++|+.+|...|...+..+.+..+  +.++...                         
T Consensus       277 APEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~  355 (415)
T KOG0671|consen  277 APEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSK  355 (415)
T ss_pred             CchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccc
Confidence            899998876 999999999999999999999999776544432211  1111000                         


Q ss_pred             ---------CCC--------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           55 ---------TIP--------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        55 ---------~~~--------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                               ..+        ......+.+|+.+||.+||++|+++.|+++||||....
T Consensus       356 ~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  356 GKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             ccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence                     000        00112356889999999999999999999999998754

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.64  E-value=1.3e-15  Score=90.20  Aligned_cols=85  Identities=26%  Similarity=0.473  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       170 ~~pe~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05067         170 TAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRMPRPDNCPEELYELMRLCWKEKPEER  247 (260)
T ss_pred             cCHHHhccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            4788775444 7889999999999999998 99999866544444333332 2223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++..
T Consensus       248 p~~~~l~~  255 (260)
T cd05067         248 PTFEYLRS  255 (260)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.64  E-value=2.8e-16  Score=105.18  Aligned_cols=90  Identities=23%  Similarity=0.290  Sum_probs=64.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|||+++..|+......  ....... ..+............++..||..+|.+||
T Consensus       182 ~APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~P~~Rp  257 (793)
T PLN00181        182 TSPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKSRT--MSSLRHR-VLPPQILLNWPKEASFCLWLLHPEPSCRP  257 (793)
T ss_pred             EChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHHHH--HHHHHHh-hcChhhhhcCHHHHHHHHHhCCCChhhCc
Confidence            6899987655 899999999999999999988776532211  1111111 11111112234567888899999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      ++.++++|+||...
T Consensus       258 s~~eil~h~~~~~~  271 (793)
T PLN00181        258 SMSELLQSEFINEP  271 (793)
T ss_pred             ChHHHhhchhhhhh
Confidence            99999999999753

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=4e-16  Score=99.99  Aligned_cols=95  Identities=22%  Similarity=0.252  Sum_probs=64.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCC-CCCCc--hhHHHHHHhhCCCC---------------------CCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKP-PWSQY--EGVAAMFKIGNSKE---------------------LPTI   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~-p~~~~--~~~~~~~~~~~~~~---------------------~~~~   56 (109)
                      +|||++.+.. ++.++|+||+||++|++++|.. |+...  .....+..+.....                     ....
T Consensus       335 ~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~  413 (501)
T PHA03210        335 NSPEILAGDG-YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHA  413 (501)
T ss_pred             CCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccC
Confidence            5899987655 8999999999999999999764 44322  11111111111000                     0000


Q ss_pred             ---------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           57 ---------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        57 ---------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                               ....+.++.+++.+||..+|.+||++.+++.||||.....
T Consensus       414 ~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        414 GHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             ccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence                     1124556778899999999999999999999999987543

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.64  E-value=1.9e-15  Score=90.36  Aligned_cols=85  Identities=24%  Similarity=0.240  Sum_probs=64.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..+...+....+++.+||..+|..|
T Consensus       178 ~~pE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~R  255 (279)
T cd05111         178 MALESILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWMIDENVR  255 (279)
T ss_pred             cCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5788876544 8899999999999999998 99999765443332222222 2223345567889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       256 ps~~el~~  263 (279)
T cd05111         256 PTFKELAN  263 (279)
T ss_pred             cCHHHHHH
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.64  E-value=1.2e-15  Score=92.29  Aligned_cols=86  Identities=23%  Similarity=0.371  Sum_probs=66.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+.......... ........+...+..+.+++.+||..+|++|
T Consensus       209 ~aPE~~~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  286 (307)
T cd05098         209 MAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQR  286 (307)
T ss_pred             eChHHhccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcccChhhC
Confidence            5889876554 8899999999999999998 88888765543333222 2323334456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       287 ps~~evl~~  295 (307)
T cd05098         287 PTFKQLVED  295 (307)
T ss_pred             cCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.64  E-value=1.6e-16  Score=101.05  Aligned_cols=87  Identities=25%  Similarity=0.425  Sum_probs=67.9

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---CCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---TIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||+++.+  ..|+..+|||+||+++||+++|..||.......+++....+...+   .....++.+.++|+..||.++
T Consensus       557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~  636 (678)
T KOG0193|consen  557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFD  636 (678)
T ss_pred             hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcC
Confidence            799999832  248999999999999999999999999444444444444442222   234567789999999999999


Q ss_pred             CCCCCcHHHHhc
Q 033880           76 PLNRPTAVKLLD   87 (109)
Q Consensus        76 p~~R~~~~~~l~   87 (109)
                      +++||.+.+++.
T Consensus       637 ~~eRP~F~~il~  648 (678)
T KOG0193|consen  637 REERPLFPQLLS  648 (678)
T ss_pred             cccCccHHHHHH
Confidence            999999999875

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.64  E-value=1.4e-15  Score=90.55  Aligned_cols=85  Identities=25%  Similarity=0.402  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+............. .....+...+..+.+++.+||..+|.+|
T Consensus       178 ~apE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  255 (270)
T cd05047         178 MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYER  255 (270)
T ss_pred             CChHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhC
Confidence            5788875544 8899999999999999997 99999765444333333222 2223345577889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       256 ps~~~il~  263 (270)
T cd05047         256 PSFAQILV  263 (270)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.64  E-value=1.2e-15  Score=95.47  Aligned_cols=87  Identities=24%  Similarity=0.338  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+|++|++++++++ |..||..................+..+...+..+.+++.+||..+|..|
T Consensus       308 ~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~R  386 (401)
T cd05107         308 MAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIR  386 (401)
T ss_pred             eChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence            5788876544 7889999999999999998 8889876544333333322222233456678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++.
T Consensus       387 Ps~~ell~~  395 (401)
T cd05107         387 PDFSQLVHL  395 (401)
T ss_pred             cCHHHHHHH
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.64  E-value=1.5e-15  Score=90.11  Aligned_cols=86  Identities=21%  Similarity=0.345  Sum_probs=65.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+|++|++++++++ |..||...........+... ...+.+...+..+.+++.+||..+|++|
T Consensus       175 ~~Pe~~~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~R  252 (266)
T cd05033         175 TAPEAIAYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNER  252 (266)
T ss_pred             cChhhhccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5788876544 8899999999999999998 98998765544443333332 2223355678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       253 p~~~ei~~~  261 (266)
T cd05033         253 PTFSQIVST  261 (266)
T ss_pred             cCHHHHHHH
Confidence            999999754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.64  E-value=2e-15  Score=88.80  Aligned_cols=85  Identities=20%  Similarity=0.344  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+|++|++++++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       162 ~~PE~~~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  239 (251)
T cd05041         162 TAPEALNYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMPAPQLCPEEIYRLMLQCWAYDPENR  239 (251)
T ss_pred             CChHhhccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHhccChhhC
Confidence            4788875544 8899999999999999998 88888765544333333222 2223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       240 p~~~ell~  247 (251)
T cd05041         240 PSFSEIYN  247 (251)
T ss_pred             cCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.64  E-value=1.6e-15  Score=92.10  Aligned_cols=85  Identities=24%  Similarity=0.377  Sum_probs=66.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+............. .....+...+..+.+++.+||..+|++|
T Consensus       203 ~aPE~~~~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~R  280 (314)
T cd05099         203 MAPEALFDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPTQR  280 (314)
T ss_pred             cCHHHHccCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5889876544 8899999999999999998 88898776544444333322 2223456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       281 ps~~~ll~  288 (314)
T cd05099         281 PTFKQLVE  288 (314)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.63  E-value=2.6e-15  Score=89.28  Aligned_cols=85  Identities=22%  Similarity=0.386  Sum_probs=66.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+... .++.++|+||+|++++++++ |..||...........+..... ...+...+..+.+++.+|+..+|++|
T Consensus       175 ~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R  252 (270)
T cd05056         175 MAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER-LPMPPNCPPTLYSLMTKCWAYDPSKR  252 (270)
T ss_pred             cChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            478887544 48899999999999999986 9999977655544444433332 23456778899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.+++.
T Consensus       253 pt~~~~~~  260 (270)
T cd05056         253 PRFTELKA  260 (270)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.63  E-value=2.3e-15  Score=89.90  Aligned_cols=85  Identities=24%  Similarity=0.253  Sum_probs=64.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.+.. ++.++|+||+|+++|++++ |..||...........+.. ...+..+...+..+.+++.+||..+|+.|
T Consensus       178 ~~PE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R  255 (279)
T cd05109         178 MALESILHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECR  255 (279)
T ss_pred             CCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCCCccCCHHHHHHHHHHcCCChhhC
Confidence            5788876554 8899999999999999998 8899876544333322222 22223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.+++.
T Consensus       256 p~~~~l~~  263 (279)
T cd05109         256 PRFRELVD  263 (279)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.63  E-value=2.1e-15  Score=89.05  Aligned_cols=85  Identities=19%  Similarity=0.387  Sum_probs=65.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+|++|+++|++++ |..||...........+... ..+..+...+..+.+++.+||..+|++|
T Consensus       166 ~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05082         166 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATR  243 (256)
T ss_pred             cCHHHHccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            5789876544 8889999999999999997 88998765443333333222 2234456778999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       244 pt~~~l~~  251 (256)
T cd05082         244 PSFLQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.63  E-value=7.9e-16  Score=92.44  Aligned_cols=86  Identities=23%  Similarity=0.380  Sum_probs=66.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+............. ..+..+...+..+.+++.+||..+|++|
T Consensus       201 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  278 (293)
T cd05053         201 MAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQR  278 (293)
T ss_pred             cCHHHhccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            5789875544 8899999999999999997 88898766544433333322 2334456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       279 ps~~eil~~  287 (293)
T cd05053         279 PTFKQLVED  287 (293)
T ss_pred             cCHHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.63  E-value=1.9e-15  Score=89.59  Aligned_cols=86  Identities=31%  Similarity=0.590  Sum_probs=62.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHH-HhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMF-KIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.... .... ........+..+...+..+.+++.+||..+|++
T Consensus       173 ~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  251 (267)
T cd08229         173 MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEK  251 (267)
T ss_pred             cCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCccc
Confidence            5788876544 788999999999999999999998654321 1221 222221111223456788999999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||++.++++
T Consensus       252 Rpt~~~i~~  260 (267)
T cd08229         252 RPDITYVYD  260 (267)
T ss_pred             CCCHHHHHH
Confidence            999997754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.63  E-value=2.8e-15  Score=88.67  Aligned_cols=85  Identities=22%  Similarity=0.403  Sum_probs=65.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       171 ~~PE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R  248 (261)
T cd05034         171 TAPEAANYGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEER  248 (261)
T ss_pred             cCHHHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            4788776544 8889999999999999998 99999776554444444332 2223455668899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++.+
T Consensus       249 p~~~~l~~  256 (261)
T cd05034         249 PTFEYLQS  256 (261)
T ss_pred             CCHHHHHH
Confidence            99999863

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.63  E-value=1.5e-15  Score=93.34  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+|++|++++++++ |..||.....................+...+..+.+++..||+.+|++|
T Consensus       248 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~R  326 (343)
T cd05103         248 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  326 (343)
T ss_pred             ECcHHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5788876544 8899999999999999997 8889876543322222222222223345567889999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++|
T Consensus       327 ps~~eil~~  335 (343)
T cd05103         327 PTFSELVEH  335 (343)
T ss_pred             cCHHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.63  E-value=3.2e-15  Score=89.79  Aligned_cols=85  Identities=21%  Similarity=0.340  Sum_probs=65.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+........... .......+...+..+.+++..||..+|++|
T Consensus       196 ~apE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~R  273 (290)
T cd05045         196 MAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKR  273 (290)
T ss_pred             cCHHHHccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccC
Confidence            5788775544 8899999999999999998 989997665444333322 222233456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       274 p~~~~i~~  281 (290)
T cd05045         274 PTFADISK  281 (290)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.63  E-value=2.9e-15  Score=89.51  Aligned_cols=85  Identities=25%  Similarity=0.427  Sum_probs=61.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHH-hCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMA-TTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+...++.++|+||+|+++|+++ .|..||................   ..+......+.+++.+||..+|++|
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~R  263 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKH---RLPEPSCKELATLISQCLTYEPTQR  263 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhcc---CCCCCCChHHHHHHHHHcccChhhC
Confidence            58998865445889999999999999995 5888887654332211111111   2233445789999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       264 ps~~~il~~  272 (274)
T cd05076         264 PSFRTILRD  272 (274)
T ss_pred             cCHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.62  E-value=3.6e-15  Score=90.11  Aligned_cols=86  Identities=23%  Similarity=0.373  Sum_probs=66.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       206 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~R  283 (304)
T cd05101         206 MAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAIPSHR  283 (304)
T ss_pred             eCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccChhhC
Confidence            5799886544 8899999999999999998 77888765544433333222 2223456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++.
T Consensus       284 ps~~e~l~~  292 (304)
T cd05101         284 PTFKQLVED  292 (304)
T ss_pred             CCHHHHHHH
Confidence            999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.62  E-value=4e-15  Score=88.25  Aligned_cols=85  Identities=21%  Similarity=0.384  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||+..... ++.++|+||+|+++|++++ |..||.+............. .........+..+.+++.+|+..+|++|
T Consensus       170 ~~PE~~~~~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  247 (262)
T cd05071         170 TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEER  247 (262)
T ss_pred             cCHhHhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCcccC
Confidence            5788775544 8899999999999999999 88888766544443333222 2223345678889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.+++.
T Consensus       248 p~~~~~~~  255 (262)
T cd05071         248 PTFEYLQA  255 (262)
T ss_pred             CCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.62  E-value=5.5e-16  Score=94.81  Aligned_cols=94  Identities=27%  Similarity=0.398  Sum_probs=68.2

Q ss_pred             CCCcceecC----CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---CCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNS----SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---PTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~----~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~   73 (109)
                      ||||++...    ..++.++|+||+|+++|++++|..||...........+......   +......+..+.+++.+|+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~  249 (331)
T cd05624         170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLIC  249 (331)
T ss_pred             CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHcc
Confidence            588987531    23778999999999999999999999876555444444332221   12223457899999999998


Q ss_pred             hCCCC--CCcHHHHhcCcccCCC
Q 033880           74 RNPLN--RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~~--R~~~~~~l~~~~~~~~   94 (109)
                      .+++.  |++++++++|+||.+.
T Consensus       250 ~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         250 SRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CchhhcCCCCHHHHhcCCCcCCC
Confidence            65543  4689999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.62  E-value=3.1e-15  Score=88.57  Aligned_cols=85  Identities=22%  Similarity=0.412  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       170 ~~PE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R  247 (260)
T cd05073         170 TAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEER  247 (260)
T ss_pred             cCHhHhccCC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCCCCcccCCHHHHHHHHHHcccCcccC
Confidence            4788875544 7889999999999999998 89999876544443333332 2223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       248 p~~~~l~~  255 (260)
T cd05073         248 PTFEYIQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99998763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.62  E-value=1.3e-15  Score=92.15  Aligned_cols=86  Identities=24%  Similarity=0.390  Sum_probs=64.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.............. ......+...+..+.+++.+||..+|++|
T Consensus       190 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R  267 (303)
T cd05088         190 MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYER  267 (303)
T ss_pred             cCHHHHhccC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-CCcCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5788775444 7889999999999999998 9999976554433333322 22223345567889999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       268 p~~~~il~~  276 (303)
T cd05088         268 PSFAQILVS  276 (303)
T ss_pred             cCHHHHHHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.62  E-value=4.6e-15  Score=88.40  Aligned_cols=87  Identities=21%  Similarity=0.420  Sum_probs=65.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.+.. .+.++|+||+|++++++++ |..||.....................+..++..+.+++.+||..+|++|
T Consensus       185 ~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R  263 (275)
T cd05046         185 LAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDR  263 (275)
T ss_pred             cChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5788776544 7789999999999999998 7788876544444333333322223355678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++..
T Consensus       264 p~~~~~l~~  272 (275)
T cd05046         264 PSFSELVSA  272 (275)
T ss_pred             CCHHHHHHH
Confidence            999998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.62  E-value=7.9e-17  Score=96.16  Aligned_cols=93  Identities=43%  Similarity=0.717  Sum_probs=74.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++..-+ |+.++|+||+|++..+|.-|++||....+..+.+.+-..... ..-|...+.++.+|++.||..+|+.|
T Consensus       196 MAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R  274 (502)
T KOG0574|consen  196 MAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEER  274 (502)
T ss_pred             ccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHH
Confidence            7999996655 999999999999999999999999887776665544333211 01234456788999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      .++.++++|+|++..
T Consensus       275 ~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  275 KTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHHhhhhhhcCC
Confidence            999999999999764

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=3.1e-16  Score=94.07  Aligned_cols=97  Identities=32%  Similarity=0.466  Sum_probs=73.1

Q ss_pred             CCCccee----cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------------HHHHHhhCCCCC--CCCCCC
Q 033880            1 MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------------AAMFKIGNSKEL--PTIPDD   59 (109)
Q Consensus         1 ~apE~~~----~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------------~~~~~~~~~~~~--~~~~~~   59 (109)
                      ||||++-    ....|+..+|.||+|+++|-|++|.+||.+....               ..+..+..+...  ..-|..
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah  332 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH  332 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence            7899764    2335899999999999999999999999664321               122233333221  122445


Q ss_pred             CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        60 ~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      ++.+.++++..++..++..|.++.++++|||++.....
T Consensus       333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            78899999999999999999999999999999986543

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.61  E-value=1.8e-15  Score=90.32  Aligned_cols=90  Identities=27%  Similarity=0.392  Sum_probs=69.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--------------------------   55 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (109)
                      |||++.+-. +...+|+||+||++.||+.|...|.+....+++..+......+.                          
T Consensus       185 apevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f  263 (369)
T KOG0665|consen  185 APEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISF  263 (369)
T ss_pred             CchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccch
Confidence            799998766 99999999999999999999999988766666555422111100                          


Q ss_pred             ---C-----------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           56 ---I-----------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        56 ---~-----------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                         +           +......+.+++.+||..+|++|.+++++++|||++
T Consensus       264 ~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  264 SELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence               0           112234578899999999999999999999999997

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.61  E-value=4e-15  Score=88.51  Aligned_cols=86  Identities=21%  Similarity=0.385  Sum_probs=64.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.... ++.++|+||+|+++|++++ |..||.+.........+..... ...+...+..+.+++.+||..+|+.|
T Consensus       182 ~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R  259 (273)
T cd05074         182 LALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR-LKQPPDCLEDVYELMCQCWSPEPKCR  259 (273)
T ss_pred             cCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            4677765444 7889999999999999998 8888876654443333333322 22345567899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++.
T Consensus       260 ps~~~~~~~  268 (273)
T cd05074         260 PSFQHLRDQ  268 (273)
T ss_pred             cCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.61  E-value=4.4e-15  Score=90.89  Aligned_cols=86  Identities=23%  Similarity=0.369  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       203 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~R  280 (334)
T cd05100         203 MAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQR  280 (334)
T ss_pred             cCHHHhccCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhC
Confidence            5788886544 8889999999999999998 88888766544443333222 2233456678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++.+
T Consensus       281 ps~~ell~~  289 (334)
T cd05100         281 PTFKQLVED  289 (334)
T ss_pred             cCHHHHHHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.61  E-value=8.1e-16  Score=90.22  Aligned_cols=94  Identities=31%  Similarity=0.465  Sum_probs=74.4

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC-----CCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-----DDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~   74 (109)
                      ||||.+-... +|+..+|+||+|++++|+.+|..||.+.+...........+..|...     ...+..+..++..|+..
T Consensus       234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K  313 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK  313 (361)
T ss_pred             cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence            7999887443 48999999999999999999999998876554444444444443321     22567788999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~   94 (109)
                      +-+.||+..++++++|++--
T Consensus       314 d~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  314 DRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             ccccCcchhhhhcCchhhhh
Confidence            99999999999999998753

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.61  E-value=5.6e-15  Score=87.17  Aligned_cols=85  Identities=20%  Similarity=0.352  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+... .....+...+..+.+++.+||..+|+.|
T Consensus       164 ~~pe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  241 (254)
T cd05083         164 TAPEALKHKK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKR  241 (254)
T ss_pred             cCHHHhccCC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhC
Confidence            4788875544 8889999999999999997 88999766544433333322 2223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++++++.
T Consensus       242 p~~~~l~~  249 (254)
T cd05083         242 PSFHKLRE  249 (254)
T ss_pred             cCHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.61  E-value=3.7e-15  Score=90.09  Aligned_cols=86  Identities=20%  Similarity=0.324  Sum_probs=61.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHhh------CCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAAMFKIG------NSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~--g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      ||||++.... ++.++|+||+|+++|++++  +..||.+...........      ........+..++..+.+++.+||
T Consensus       207 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  285 (304)
T cd05096         207 MAWECILMGK-FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCW  285 (304)
T ss_pred             cCHHHHhcCC-CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHc
Confidence            5889876554 8899999999999999986  556776544332221111      111112234567889999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||++.++.+
T Consensus       286 ~~~p~~RPs~~~i~~  300 (304)
T cd05096         286 SRDCRERPSFSDIHA  300 (304)
T ss_pred             cCCchhCcCHHHHHH
Confidence            999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.61  E-value=4.9e-15  Score=87.79  Aligned_cols=86  Identities=31%  Similarity=0.610  Sum_probs=62.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCCC-CCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||..... .............++.+. ..+..+.+++.+||..+|++
T Consensus       173 ~apE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~  251 (267)
T cd08224         173 MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEK  251 (267)
T ss_pred             cCHHHhccCC-CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCccc
Confidence            4788876544 88899999999999999999999864431 111111112222223333 67788999999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||++.++++
T Consensus       252 Rp~~~~il~  260 (267)
T cd08224         252 RPDISYVLQ  260 (267)
T ss_pred             CCCHHHHHH
Confidence            999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.60  E-value=3.7e-15  Score=89.21  Aligned_cols=86  Identities=21%  Similarity=0.279  Sum_probs=61.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH--------------HHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA--------------AMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      ++||++.+.. ++.++|+||+|++++++++|..|+.......              ............+.+...+..+.+
T Consensus       177 ~~PE~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd05080         177 YAVECLKENK-FSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYI  255 (283)
T ss_pred             eCHhHhcccC-CCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHH
Confidence            4788776544 7889999999999999999988875432110              000011111112234567789999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhc
Q 033880           67 FIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      ++.+||..+|++||+++++++
T Consensus       256 li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         256 LMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.60  E-value=4.5e-15  Score=89.04  Aligned_cols=94  Identities=37%  Similarity=0.620  Sum_probs=67.7

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHH-HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ++||.+.+.. ..+.++|+|++|++++++++|..||.....   .... ......  .+..+..++..+++++.+||..+
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~  250 (288)
T cd05583         173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMSAEARDFIQKLLEKD  250 (288)
T ss_pred             cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccCHHHHHHHHHHhcCC
Confidence            4678764322 367899999999999999999999853221   1111 112222  12445667889999999999999


Q ss_pred             CCCCCcH---HHHhcCcccCCCCC
Q 033880           76 PLNRPTA---VKLLDHPFVKGAAP   96 (109)
Q Consensus        76 p~~R~~~---~~~l~~~~~~~~~~   96 (109)
                      |+.||++   .+++.|+||+....
T Consensus       251 p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         251 PKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HhhccCcchHHHHhcCcccccCCH
Confidence            9999984   56799999988654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.60  E-value=2.3e-15  Score=92.10  Aligned_cols=94  Identities=32%  Similarity=0.609  Sum_probs=76.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... |+.|+|+||+|+++|++++|+.||......+.+..+...... +..+...+....+++...+..++..|
T Consensus       181 MAPEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~  259 (429)
T KOG0595|consen  181 MAPEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDR  259 (429)
T ss_pred             cCHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcccc
Confidence            8999997655 999999999999999999999999987777666655544433 33445566677799999999999999


Q ss_pred             CcHHHHhcCcccCCCC
Q 033880           80 PTAVKLLDHPFVKGAA   95 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~   95 (109)
                      .++.+.+.|++.....
T Consensus       260 ~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  260 ISFEDFFDHPFLAANP  275 (429)
T ss_pred             CchHHhhhhhhcccCc
Confidence            9999999998887654

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.60  E-value=4.9e-15  Score=88.08  Aligned_cols=85  Identities=21%  Similarity=0.327  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.... ++.++|+||+|++++++++ |..||...........+... ...+.+...+..+.+++.+||..+|++|
T Consensus       178 ~~PE~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  255 (269)
T cd05065         178 TAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPPPMDCPTALHQLMLDCWQKDRNAR  255 (269)
T ss_pred             cCHhHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHcCCChhhC
Confidence            4788875544 7889999999999999886 99999765544443333322 2223355678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++++++.
T Consensus       256 p~~~~i~~  263 (269)
T cd05065         256 PKFGQIVS  263 (269)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.60  E-value=5e-15  Score=89.03  Aligned_cols=86  Identities=20%  Similarity=0.335  Sum_probs=62.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHhhCC------CCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAAMFKIGNS------KELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      ||||++.... ++.++|+||+|+++|++++  +..||........+......      ......+...+.++.+++.+||
T Consensus       199 ~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  277 (296)
T cd05051         199 MAWESVLLGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECW  277 (296)
T ss_pred             cCHHHhhcCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHh
Confidence            5788876544 8899999999999999987  66777654433332222111      1111224456789999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||++.++++
T Consensus       278 ~~~p~~Rpt~~el~~  292 (296)
T cd05051         278 RRDEEDRPTFREIHL  292 (296)
T ss_pred             ccChhcCCCHHHHHH
Confidence            999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.60  E-value=7.2e-15  Score=88.87  Aligned_cols=85  Identities=21%  Similarity=0.227  Sum_probs=63.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+||+|+++|++++ |..||.+............. ..+..+...+....+++..||..+|++|
T Consensus       178 ~~PE~~~~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~R  255 (303)
T cd05110         178 MALECIHYRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ERLPQPPICTIDVYMVMVKCWMIDADSR  255 (303)
T ss_pred             CCHHHhccCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5788775544 8889999999999999997 88898765433322222222 2223345677889999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       256 p~~~~l~~  263 (303)
T cd05110         256 PKFKELAA  263 (303)
T ss_pred             cCHHHHHH
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.60  E-value=7.8e-15  Score=87.17  Aligned_cols=85  Identities=21%  Similarity=0.348  Sum_probs=65.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||++.+.. ++.++|+|++|++++++++ |..||...........+.... ..+.+...+..+.+++.+||..+|.+|
T Consensus       176 ~~pe~~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  253 (267)
T cd05066         176 TAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RLPAPMDCPAALHQLMLDCWQKDRNER  253 (267)
T ss_pred             cCHhHhccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCchhC
Confidence            5788876544 8899999999999999886 999997665444443333332 223345678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       254 p~~~~i~~  261 (267)
T cd05066         254 PKFEQIVS  261 (267)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.60  E-value=8e-15  Score=88.02  Aligned_cols=94  Identities=29%  Similarity=0.502  Sum_probs=69.1

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      ++||++... ..++.++|+|++|++++++++|..||......   ......... ..++.+...+..+.+++.+||..+|
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p  251 (290)
T cd05613         173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDP  251 (290)
T ss_pred             CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCH
Confidence            578877532 23678899999999999999999998643211   111111111 1223456678899999999999999


Q ss_pred             CCCC-----cHHHHhcCcccCCCC
Q 033880           77 LNRP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        77 ~~R~-----~~~~~l~~~~~~~~~   95 (109)
                      ++|+     ++++++.|+||....
T Consensus       252 ~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         252 KKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHhcCCCCCCHHHHHcCcccccCC
Confidence            9997     899999999998765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.60  E-value=1.4e-14  Score=85.56  Aligned_cols=85  Identities=20%  Similarity=0.388  Sum_probs=64.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||............... .....+...+..+.+++.+||..+|++|
T Consensus       166 ~ape~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05039         166 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKR  243 (256)
T ss_pred             cCchhhcCCc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhC
Confidence            4788876544 7889999999999999997 98998766444333332222 2223455678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++++++.
T Consensus       244 p~~~~l~~  251 (256)
T cd05039         244 PTFKQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.59  E-value=1.1e-14  Score=87.68  Aligned_cols=86  Identities=24%  Similarity=0.309  Sum_probs=61.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHhh------CCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAAMFKIG------NSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~--g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++.... ++.++|+||+|++++++++  +..||.............      ........+...+..+.+++.+||
T Consensus       198 ~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  276 (295)
T cd05097         198 MAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCW  276 (295)
T ss_pred             cChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHc
Confidence            5788776544 8899999999999999988  566776543322221111      111112234456789999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||+++++++
T Consensus       277 ~~~p~~RPs~~~i~~  291 (295)
T cd05097         277 SRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=3.6e-15  Score=95.61  Aligned_cols=97  Identities=37%  Similarity=0.644  Sum_probs=79.8

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.  +.+.|+-++||||+|++..++.-.++|+.+.+..++++.+.....+.......+..+.+|+..||+.-|..
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqe  268 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQE  268 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCccc
Confidence            8999987  44559999999999999999999999988888888887766554432223446788999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCc
Q 033880           79 RPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~   97 (109)
                      ||+.+++++|+|+....+.
T Consensus       269 Rptse~ll~H~fv~R~Rp~  287 (948)
T KOG0577|consen  269 RPTSEELLKHRFVLRERPP  287 (948)
T ss_pred             CCcHHHHhhcchhccCCCc
Confidence            9999999999998765443

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.58  E-value=9.4e-15  Score=88.03  Aligned_cols=86  Identities=23%  Similarity=0.339  Sum_probs=60.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHh------hCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAAMFKI------GNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~--g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      ++||+..... ++.++|+||+|+++|++++  |..||............      .......+.+..++..+.+++..||
T Consensus       199 ~~pe~~~~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  277 (296)
T cd05095         199 MSWESILLGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCW  277 (296)
T ss_pred             CCHHHHhcCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHc
Confidence            4677665444 8889999999999999998  66788654332222111      0111112234556789999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||++.++.+
T Consensus       278 ~~~p~~Rp~~~~i~~  292 (296)
T cd05095         278 RRNAKERPSFQEIHA  292 (296)
T ss_pred             CCCcccCCCHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.58  E-value=1.7e-14  Score=85.00  Aligned_cols=85  Identities=24%  Similarity=0.437  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.. ..++.++|+|++|++++++++ |..||................ ....+...+..+.+++.+|+..+|++|
T Consensus       171 ~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R  248 (258)
T smart00219      171 MAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-RLPKPENCPPEIYKLMLQCWAEDPEDR  248 (258)
T ss_pred             cChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHCcCChhhC
Confidence            47887744 348899999999999999998 788887655444433333332 233455678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       249 pt~~~ll~  256 (258)
T smart00219      249 PTFSELVE  256 (258)
T ss_pred             cCHHHHHh
Confidence            99999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.58  E-value=1.7e-14  Score=86.15  Aligned_cols=85  Identities=25%  Similarity=0.286  Sum_probs=65.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||.+.... ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|..|
T Consensus       178 ~~PE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~R  255 (279)
T cd05057         178 MALESILHRI-YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESR  255 (279)
T ss_pred             cCHHHhhcCC-cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5788775444 7889999999999999998 99999876544433333332 2233456678899999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       256 p~~~~l~~  263 (279)
T cd05057         256 PTFKELIN  263 (279)
T ss_pred             CCHHHHHH
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=2.1e-15  Score=97.28  Aligned_cols=107  Identities=30%  Similarity=0.454  Sum_probs=80.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++...+ |+..+|+|+.|+++|+|+.|+.||...........++.+.....++  ...+.++.++|.++.. ++++
T Consensus       838 iapevl~r~g-~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~  915 (1034)
T KOG0608|consen  838 IAPEVLARTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADS  915 (1034)
T ss_pred             cChHHhcccC-ccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhh
Confidence            6899997655 9999999999999999999999998776666666666665544333  4578899999887654 3667


Q ss_pred             CC---cHHHHhcCcccCCCCCcc-ccccccccccC
Q 033880           79 RP---TAVKLLDHPFVKGAAPLE-RTILAPELSRL  109 (109)
Q Consensus        79 R~---~~~~~l~~~~~~~~~~~~-~~~~~~~~~~l  109 (109)
                      |.   .++++..||||+++.... +...++.|.++
T Consensus       916 RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~I  950 (1034)
T KOG0608|consen  916 RLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRI  950 (1034)
T ss_pred             hhcccchhhhhcCccccccchHhhhhccCCcCccc
Confidence            76   477899999999974433 34555666553

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.57  E-value=8.6e-16  Score=100.40  Aligned_cols=84  Identities=24%  Similarity=0.398  Sum_probs=72.1

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |||.+... +++.++|+||+|+++||+++ |..||-...+.+....+..+..+| .|..++..++.||..||+++...||
T Consensus       802 APEAIa~R-KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP-pPmDCP~aL~qLMldCWqkdR~~RP  879 (996)
T KOG0196|consen  802 APEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP-PPMDCPAALYQLMLDCWQKDRNRRP  879 (996)
T ss_pred             ChhHhhhc-ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC-CCCCCcHHHHHHHHHHHHHHhhcCC
Confidence            79988654 49999999999999999988 999998777777766666665555 4889999999999999999999999


Q ss_pred             cHHHHhc
Q 033880           81 TAVKLLD   87 (109)
Q Consensus        81 ~~~~~l~   87 (109)
                      .|.+++.
T Consensus       880 ~F~qiV~  886 (996)
T KOG0196|consen  880 KFAQIVS  886 (996)
T ss_pred             CHHHHHH
Confidence            9999865

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.57  E-value=1.9e-14  Score=85.63  Aligned_cols=86  Identities=23%  Similarity=0.446  Sum_probs=59.4

Q ss_pred             CCCcceecCC------CCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCC----CCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKNSS------GCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKEL----PTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~~~------~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~   69 (109)
                      +|||++.+..      .++.++|+||+|++++++++ |..||..................    +......+....+++.
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (269)
T cd05087         169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQ  248 (269)
T ss_pred             cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHH
Confidence            5788774321      25789999999999999996 99999765444332221111111    1222345678899999


Q ss_pred             HHhhhCCCCCCcHHHHhc
Q 033880           70 LCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~   87 (109)
                      .|| .+|++||+++++.+
T Consensus       249 ~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         249 FCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHh-cCcccCCCHHHHHH
Confidence            998 58999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1.5e-15  Score=95.73  Aligned_cols=86  Identities=22%  Similarity=0.432  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+... .|+.++|+|++|+++||++. |..||.+.........+.......+.+...+.....++.+||..+|+.|
T Consensus       329 LAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R  407 (474)
T KOG0194|consen  329 LAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDR  407 (474)
T ss_pred             cChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhc
Confidence            689999765 59999999999999999999 8889999887777766655555555677888999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      +++.++.+
T Consensus       408 ~tm~~i~~  415 (474)
T KOG0194|consen  408 PTMSTIKK  415 (474)
T ss_pred             cCHHHHHH
Confidence            99998753

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=8.3e-15  Score=91.69  Aligned_cols=95  Identities=27%  Similarity=0.439  Sum_probs=66.2

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-------hHHHHHHhhCCCCCC--------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-------GVAAMFKIGNSKELP--------------------   54 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-------~~~~~~~~~~~~~~~--------------------   54 (109)
                      |||++.+.+ |+..+|+||++|+.+|+.+|-..|....       ..+....+...+..|                    
T Consensus       419 apEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~L  497 (590)
T KOG1290|consen  419 APEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGEL  497 (590)
T ss_pred             CcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccce
Confidence            799998877 9999999999999999999988774221       111111110000000                    


Q ss_pred             ------C-------------CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           55 ------T-------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        55 ------~-------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                            .             ++.....++.+|+.-||..+|++|+++.++++|||+......
T Consensus       498 rhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  498 RHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             ecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence                  0             011123456789999999999999999999999999966554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.57  E-value=1.7e-14  Score=93.62  Aligned_cols=85  Identities=19%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--------------CCCCCC------CCCCCCHHHHHHHHHH
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--------------SKELPT------IPDDLSDEGKDFIRLC   71 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--------------~~~~~~------~~~~~~~~~~~l~~~~   71 (109)
                      ++.++|+||+||++|+|+++..++...  ...+.....              ....+.      ..........+|+.+|
T Consensus       356 ~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m  433 (566)
T PLN03225        356 LPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM  433 (566)
T ss_pred             CCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence            345679999999999999876554321  111111100              000000      0011233456899999


Q ss_pred             hhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           72 LQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      +..+|++||+++++++||||++.....
T Consensus       434 L~~dP~kR~ta~e~L~Hpff~~~~~~~  460 (566)
T PLN03225        434 MRFKGRQRISAKAALAHPYFDREGLLG  460 (566)
T ss_pred             ccCCcccCCCHHHHhCCcCcCCCCccc
Confidence            999999999999999999999865543

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.57  E-value=1.4e-14  Score=87.38  Aligned_cols=84  Identities=18%  Similarity=0.193  Sum_probs=61.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-H-------HHhhCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-M-------FKIGNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||+..+.. ++.++|+||+|++++++++|..||.+...... .       ........  ......+..+.+++..||
T Consensus       200 ~ape~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  276 (294)
T PHA02882        200 AGLDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK--IKIKNANKFIYDFIECVT  276 (294)
T ss_pred             cCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh--hccCCCCHHHHHHHHHHH
Confidence            5778775544 89999999999999999999999976532111 1       11111111  112345788999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||+++++.+
T Consensus       277 ~~~~~~rp~~~~l~~  291 (294)
T PHA02882        277 KLSYEEKPDYDALIK  291 (294)
T ss_pred             hCCCCCCCCHHHHHH
Confidence            999999999999874

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.56  E-value=7.4e-15  Score=96.17  Aligned_cols=83  Identities=30%  Similarity=0.462  Sum_probs=63.7

Q ss_pred             CCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            2 APEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         2 apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +||++-  .+..++.|+|||+|||++|.++....||++....    .+.......+..+..+..+++||..||+.+|.+|
T Consensus       223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~R  298 (738)
T KOG1989|consen  223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDER  298 (738)
T ss_pred             ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEeccccCCCCccHHHHHHHHHHHHhccCcccC
Confidence            788875  2224899999999999999999999999865322    3333333222235678899999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++-+++.+
T Consensus       299 PnI~Qv~~~  307 (738)
T KOG1989|consen  299 PNIYQVLEE  307 (738)
T ss_pred             CCHHHHHHH
Confidence            999998654

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.53  E-value=6e-14  Score=84.15  Aligned_cols=96  Identities=25%  Similarity=0.459  Sum_probs=69.2

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------HHHHHhhCCCCCC---------CCC------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------AAMFKIGNSKELP---------TIP------   57 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~---------~~~------   57 (109)
                      |||.+.+...|+.+.|+|+.||++.|+++-.+.|.+.+..         +++.++......|         ..|      
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence            8999999888999999999999999999988888664321         1222221111100         001      


Q ss_pred             --------------------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           58 --------------------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        58 --------------------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                                          ..-++...+|+.++|..||.+|++++++++|+||+.....
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence                                0123447789999999999999999999999999976443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.53  E-value=2e-15  Score=98.93  Aligned_cols=89  Identities=31%  Similarity=0.436  Sum_probs=65.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.... -+.++|++++||++|+.++ |.+||......+.  ++..+.. ...........+.+|+.+|+.++|..
T Consensus       681 ~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~  757 (903)
T KOG1027|consen  681 QAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQL  757 (903)
T ss_pred             cCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCchHHHHHHHHHhcCCCccc
Confidence            5899997665 6779999999999999998 6889975433222  2222221 11111222228999999999999999


Q ss_pred             CCcHHHHhcCcccC
Q 033880           79 RPTAVKLLDHPFVK   92 (109)
Q Consensus        79 R~~~~~~l~~~~~~   92 (109)
                      ||++.+++.||+|=
T Consensus       758 RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  758 RPSATDVLNHPLFW  771 (903)
T ss_pred             CCCHHHHhCCCccC
Confidence            99999999999884

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.52  E-value=1.8e-15  Score=95.58  Aligned_cols=91  Identities=27%  Similarity=0.505  Sum_probs=66.6

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH-hhCCCCC---------------------------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSKEL---------------------------   53 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~---------------------------   53 (109)
                      |||.+.+.. |+...|+||+||++||+.+|+..|++..+...+.. +...+..                           
T Consensus       603 aPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D  681 (752)
T KOG0670|consen  603 APEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVD  681 (752)
T ss_pred             CcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecc
Confidence            899998876 99999999999999999999999988654433221 1000000                           


Q ss_pred             ---------------C------------CCCC---CCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           54 ---------------P------------TIPD---DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        54 ---------------~------------~~~~---~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                                     |            .++.   ..-..+++|+.+|+..+|++|.+..++|+||||++
T Consensus       682 ~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  682 KVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             ccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                           0            0000   01234678999999999999999999999999975

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.52  E-value=8.3e-14  Score=82.81  Aligned_cols=86  Identities=24%  Similarity=0.505  Sum_probs=60.1

Q ss_pred             CCCcceec------CCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCC----CCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKN------SSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKEL----PTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~------~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~   69 (109)
                      +|||++..      ...++.++|+||+|+++|++++ |..||..................    +..+...+....+++.
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHH
Confidence            47887642      1236789999999999999999 77888766544443332222211    1223456778888999


Q ss_pred             HHhhhCCCCCCcHHHHhc
Q 033880           70 LCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~   87 (109)
                      .|| .+|++||+++++++
T Consensus       249 ~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         249 FCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHh-cCcccccCHHHHHH
Confidence            998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.52  E-value=3.8e-14  Score=84.95  Aligned_cols=87  Identities=25%  Similarity=0.379  Sum_probs=59.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc--------------hhHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY--------------EGVAAMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      +|||++.+.. ++.++|+||+|+++++++++..+....              ................+.+...+..+.+
T Consensus       179 ~apE~~~~~~-~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd05079         179 YAPECLIQSK-FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQ  257 (284)
T ss_pred             cCHHHhccCC-CCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHH
Confidence            4788876544 788999999999999999866543211              0001111111111222335567889999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhcC
Q 033880           67 FIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      ++.+||..+|++||+++++++.
T Consensus       258 li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         258 LMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.52  E-value=1.3e-13  Score=82.09  Aligned_cols=86  Identities=20%  Similarity=0.408  Sum_probs=59.1

Q ss_pred             CCCcceecC------CCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCC----CCCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKNS------SGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKE----LPTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~~------~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~   69 (109)
                      +|||++...      ..++.++|+||+|+++|++++ +..||.................    .+......+....+++.
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  247 (268)
T cd05086         168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQ  247 (268)
T ss_pred             cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHH
Confidence            478876421      125678999999999999997 5678865544443333222211    12233456788899999


Q ss_pred             HHhhhCCCCCCcHHHHhc
Q 033880           70 LCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~   87 (109)
                      .|| .+|++||+++++++
T Consensus       248 ~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         248 FCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHh-hCcccCCCHHHHHH
Confidence            999 67999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.52  E-value=9.5e-14  Score=83.14  Aligned_cols=86  Identities=21%  Similarity=0.332  Sum_probs=59.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------------HHHHHhhCCCCCCCCCCCCCHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------------AAMFKIGNSKELPTIPDDLSDEGK   65 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~   65 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..++......               .............+.+...+..+.
T Consensus       178 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05081         178 YAPESLTESK-FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY  256 (284)
T ss_pred             eCHHHhccCC-cChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHH
Confidence            4788876544 888999999999999999976554321110               000111111122233456788999


Q ss_pred             HHHHHHhhhCCCCCCcHHHHhc
Q 033880           66 DFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        66 ~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      +++.+||..+|++||++.++++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         257 AIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.51  E-value=1.2e-13  Score=81.57  Aligned_cols=84  Identities=27%  Similarity=0.472  Sum_probs=59.6

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++... ..++.++|+||+|++++++++ |..|+............... .  ..+......+.+++.+||..+|++
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~  247 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-H--RLPMPDCAELANLINQCWTYDPTK  247 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-C--CCCCCCchHHHHHHHHHhccChhh
Confidence            579988654 247889999999999999998 57777654322221111111 1  112222378899999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||++.++++
T Consensus       248 Rpt~~~il~  256 (259)
T cd05037         248 RPSFRAILR  256 (259)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.51  E-value=4.7e-14  Score=84.26  Aligned_cols=86  Identities=28%  Similarity=0.477  Sum_probs=61.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--------------HHHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--------------AAMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      ++||++.+.. ++.++|+|++|++++++++|..|+......              ...............+..++..+.+
T Consensus       179 ~~Pe~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd05038         179 YAPECLRTSK-FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYD  257 (284)
T ss_pred             cCcHHHccCC-CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHH
Confidence            3688775544 788999999999999999998887543211              1111111122222334566788999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhc
Q 033880           67 FIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      ++.+||..+|++||++.++++
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         258 LMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.51  E-value=3.4e-14  Score=90.87  Aligned_cols=87  Identities=23%  Similarity=0.334  Sum_probs=67.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh--CCCCCCCchhHHHHHHhhC------CCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT--TKPPWSQYEGVAAMFKIGN------SKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      ||+|.+..+. ++.++|+|++|+++||+++  ...||..........+...      ....+..|..++..+.++|.+||
T Consensus       706 mawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw  784 (807)
T KOG1094|consen  706 MAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCW  784 (807)
T ss_pred             hhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHh
Confidence            6888887665 9999999999999999876  7789976654444333221      11124457889999999999999


Q ss_pred             hhCCCCCCcHHHHhcC
Q 033880           73 QRNPLNRPTAVKLLDH   88 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~~   88 (109)
                      ..+..+||+++++..+
T Consensus       785 ~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  785 RRESEQRPSFEQLHLF  800 (807)
T ss_pred             chhhhcCCCHHHHHHH
Confidence            9999999999998643

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.47  E-value=1.4e-14  Score=92.18  Aligned_cols=91  Identities=23%  Similarity=0.322  Sum_probs=75.3

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCc
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT   81 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~   81 (109)
                      |||++.+..+.++.+|+|++|+++|.++.|..||.+..-............  .++..++.++.+++++++..+|.+|.+
T Consensus       222 aPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~--rIp~~ms~dce~lLrk~lvl~Pskr~~  299 (596)
T KOG0586|consen  222 APELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY--RIPFYMSCDCEDLLRKFLVLNPSKRGP  299 (596)
T ss_pred             ChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee--cccceeechhHHHHHHhhccCccccCC
Confidence            789988777678899999999999999999999987654443333333322  457788999999999999999999999


Q ss_pred             HHHHhcCcccCCC
Q 033880           82 AVKLLDHPFVKGA   94 (109)
Q Consensus        82 ~~~~l~~~~~~~~   94 (109)
                      ++++++|.|....
T Consensus       300 ~dqim~~~W~n~~  312 (596)
T KOG0586|consen  300 CDQIMKDRWRNDL  312 (596)
T ss_pred             HHHhhhhcccchh
Confidence            9999999998753

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.47  E-value=1.4e-13  Score=91.01  Aligned_cols=83  Identities=20%  Similarity=0.245  Sum_probs=67.3

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |-|.+.. ..|++++|+|++||++||+++ |..||.+....+....+..+.. ...|+.++-+++.+|.+||..++..||
T Consensus       868 ale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~~~rp  945 (1177)
T KOG1025|consen  868 ALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDADSRP  945 (1177)
T ss_pred             HHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCcccCc
Confidence            3344433 349999999999999999999 9999998876666555555554 456889999999999999999999999


Q ss_pred             cHHHHh
Q 033880           81 TAVKLL   86 (109)
Q Consensus        81 ~~~~~l   86 (109)
                      .|+++.
T Consensus       946 ~fkel~  951 (1177)
T KOG1025|consen  946 TFKELA  951 (1177)
T ss_pred             cHHHHH
Confidence            998863

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.47  E-value=2.6e-13  Score=84.11  Aligned_cols=88  Identities=22%  Similarity=0.343  Sum_probs=73.7

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCc
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT   81 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~   81 (109)
                      +||.+++..+-++.+|.||+|+++|.+.+|..||.+.+......++..+...   .+..+.++..|+..||..+|+.|.+
T Consensus       220 SPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr---EP~~PSdA~gLIRwmLmVNP~RRAT  296 (668)
T KOG0611|consen  220 SPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR---EPETPSDASGLIRWMLMVNPERRAT  296 (668)
T ss_pred             CccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc---CCCCCchHHHHHHHHHhcCcccchh
Confidence            6888887776788999999999999999999999998776666666665543   2345677889999999999999999


Q ss_pred             HHHHhcCcccC
Q 033880           82 AVKLLDHPFVK   92 (109)
Q Consensus        82 ~~~~l~~~~~~   92 (109)
                      +.++-.|=|.+
T Consensus       297 ieDiAsHWWvN  307 (668)
T KOG0611|consen  297 IEDIASHWWVN  307 (668)
T ss_pred             HHHHhhhheee
Confidence            99999987765

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.46  E-value=5.4e-13  Score=77.27  Aligned_cols=94  Identities=23%  Similarity=0.427  Sum_probs=68.1

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCC-CCchhHHHHHHhhC--------------------------CCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-SQYEGVAAMFKIGN--------------------------SKELP   54 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~-~~~~~~~~~~~~~~--------------------------~~~~~   54 (109)
                      .||.+.+...|+.+.|+||+||++..|+..+-|| .+.++.+++..+..                          +....
T Consensus       200 GPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~r  279 (338)
T KOG0668|consen  200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSR  279 (338)
T ss_pred             CchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccc
Confidence            4788877667899999999999999999977776 45444444333210                          00000


Q ss_pred             CC---------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           55 TI---------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        55 ~~---------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      ..         ..-.++++.+|+.++|..|..+|+++++++.||||....
T Consensus       280 k~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  280 KPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             ccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence            00         112357889999999999999999999999999998653

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=3.8e-13  Score=78.88  Aligned_cols=94  Identities=24%  Similarity=0.381  Sum_probs=70.1

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--CCCC------------------CCCC----
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKEL------------------PTIP----   57 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~------------------~~~~----   57 (109)
                      +||.+.+...|+.+.|+|+.||++.+|+++.+.+.+.....++..+..  +...                  ++.+    
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~  275 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQK  275 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchh
Confidence            678888777799999999999999999999998887765554433210  0000                  1111    


Q ss_pred             ---------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           58 ---------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        58 ---------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                               ..-..+..+|+.+++..||++|+.+++++.|.||-...
T Consensus       276 rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  276 RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             hhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence                     11234678999999999999999999999999997543

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.46  E-value=3e-15  Score=95.00  Aligned_cols=93  Identities=26%  Similarity=0.394  Sum_probs=76.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.+ |+...|+||+|+++|-.++|..||...+......+-......+.-+..++..+.+|+..+|+..-.+|.
T Consensus       733 LaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy  811 (888)
T KOG4236|consen  733 LAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY  811 (888)
T ss_pred             cCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhc
Confidence            5899998766 999999999999999999999999876554443332333444555677899999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      +.+..+.|+|.++-
T Consensus       812 svdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  812 SVDKSLSHPWLQDY  825 (888)
T ss_pred             chHhhccchhhhcc
Confidence            99999999999864

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.45  E-value=7e-14  Score=95.41  Aligned_cols=87  Identities=21%  Similarity=0.312  Sum_probs=57.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh----HHHHHHhhC---------CCCCCC---CCCCCCHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG----VAAMFKIGN---------SKELPT---IPDDLSDEG   64 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~---------~~~~~~---~~~~~~~~~   64 (109)
                      ||||++.+.. ++.++|+||+|+++||+++|+.||.....    .........         ......   .......++
T Consensus       845 ~aPE~~~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  923 (968)
T PLN00113        845 VAPETRETKD-ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV  923 (968)
T ss_pred             cCcccccCCC-CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence            6999986554 89999999999999999999999853211    111111000         000000   001112346


Q ss_pred             HHHHHHHhhhCCCCCCcHHHHhcC
Q 033880           65 KDFIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        65 ~~l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      .+++.+||..+|++||+++++++.
T Consensus       924 ~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        924 MNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHhhCcCCchhCcCHHHHHHH
Confidence            678889999999999999999764

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=1.9e-13  Score=83.08  Aligned_cols=93  Identities=24%  Similarity=0.484  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-------EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||.+.+.. |+..+|+|++|+++++|+.|+.||.-.       +..+-++.++.... -..|..++-.+..+++.-+.
T Consensus       418 iapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq-iriprslsvkas~vlkgfln  495 (593)
T KOG0695|consen  418 IAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ-IRIPRSLSVKASHVLKGFLN  495 (593)
T ss_pred             cchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-ccccceeehhhHHHHHHhhc
Confidence            5899998766 999999999999999999999999421       11222333322222 14578888888899999999


Q ss_pred             hCCCCCC------cHHHHhcCcccCCCC
Q 033880           74 RNPLNRP------TAVKLLDHPFVKGAA   95 (109)
Q Consensus        74 ~~p~~R~------~~~~~l~~~~~~~~~   95 (109)
                      .+|+.|.      .+.++..|+||+.+.
T Consensus       496 kdp~erlgc~~~~g~~dik~h~ffr~id  523 (593)
T KOG0695|consen  496 KDPKERLGCRPQTGFSDIKSHAFFRSID  523 (593)
T ss_pred             CCcHHhcCCCcccchhhhhcchhhhhCC
Confidence            9999995      578899999999653

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.43  E-value=9e-13  Score=89.71  Aligned_cols=89  Identities=29%  Similarity=0.502  Sum_probs=64.9

Q ss_pred             CCCcceecCC--CCCchHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHhhCCCCCCCC---CCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTI---PDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~--~~~~~~d~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+..  .|+.|+|+||+|++++||+.   ||... +....+..+. .+..|..   ....-+.-+.++..|+..
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~h  857 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSH  857 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcC
Confidence            5899887544  69999999999999999987   36544 3334444444 3333322   222334567889999999


Q ss_pred             CCCCCCcHHHHhcCcccCC
Q 033880           75 NPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~   93 (109)
                      +|++||++.+++.+.|+-.
T Consensus       858 dP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  858 DPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             CCccCCCHHHHhhccCCCc
Confidence            9999999999999999874

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.41  E-value=1.3e-12  Score=73.32  Aligned_cols=94  Identities=26%  Similarity=0.486  Sum_probs=70.7

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCC------------------CCCC-----
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKEL------------------PTIP-----   57 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~------------------~~~~-----   57 (109)
                      +|.++.+..-|+...|+||.||++.|+.. |.+.|.+.+..+++.++......                  |.++     
T Consensus       169 ppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsw  248 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSW  248 (292)
T ss_pred             CcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchH
Confidence            46667666679999999999999999988 88889988777766554221111                  0011     


Q ss_pred             ----CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           58 ----DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        58 ----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                          +..+..-++++.+++.-+|..|++++..++||||....
T Consensus       249 sqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  249 SQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             HHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence                12344567899999999999999999999999998654

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.41  E-value=8.7e-13  Score=89.01  Aligned_cols=85  Identities=21%  Similarity=0.243  Sum_probs=59.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-CCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-SKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||+++++++|..||.............. ...........+..+.+++.+|+..+|++|
T Consensus       198 mAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR  276 (932)
T PRK13184        198 MAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAER  276 (932)
T ss_pred             CCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhC
Confidence            6899886655 88999999999999999999999976443322221111 100001123567889999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      ++..+.+
T Consensus       277 ~ss~eeL  283 (932)
T PRK13184        277 YSSVQEL  283 (932)
T ss_pred             cCHHHHH
Confidence            8755443

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=4.2e-13  Score=84.12  Aligned_cols=95  Identities=21%  Similarity=0.338  Sum_probs=71.0

Q ss_pred             CCCcceec---CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH---hhCCC-CCCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN---SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK---IGNSK-ELPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~---~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      ++||++.-   ....+.++|+||+||++|..++|+.||...........   +.... ...+..+..+.++++|+.+||+
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLa  726 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLA  726 (775)
T ss_pred             cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHH
Confidence            47888762   34588999999999999999999999986543333222   11111 1112245578899999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      +..++|....++-.||||....
T Consensus       727 YRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  727 YRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             hhhhhhhhHHHHccCccccchh
Confidence            9999999999999999998643

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.39  E-value=2.9e-12  Score=82.25  Aligned_cols=79  Identities=15%  Similarity=0.157  Sum_probs=53.8

Q ss_pred             hHHHHHHHHHHHHHHhCCC-CCCCchhHHH-----------HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC---CCC
Q 033880           15 AVDIWSLGCTVLEMATTKP-PWSQYEGVAA-----------MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP---LNR   79 (109)
Q Consensus        15 ~~d~ws~g~~~~~~~~g~~-p~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p---~~R   79 (109)
                      +.|+||+||++++|+++.. |+........           +................+...++++.+++..++   .+|
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R  491 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR  491 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence            4799999999999999764 6643211110           001111111112244567889999999999766   689


Q ss_pred             CcHHHHhcCcccCC
Q 033880           80 PTAVKLLDHPFVKG   93 (109)
Q Consensus        80 ~~~~~~l~~~~~~~   93 (109)
                      ++++++++||||..
T Consensus       492 lSa~eaL~Hp~f~~  505 (507)
T PLN03224        492 LSVGQALSHRFFLP  505 (507)
T ss_pred             CCHHHHhCCCCcCC
Confidence            99999999999964

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.28  E-value=3.4e-12  Score=84.63  Aligned_cols=92  Identities=37%  Similarity=0.631  Sum_probs=75.4

Q ss_pred             CCCcceecCC----CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS----GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++....    .|+..+|+||+|++..||..|.+|+-...+..+++.+.....+. ..|...+..+.+++..||..+
T Consensus       190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd  269 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKD  269 (953)
T ss_pred             ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhc
Confidence            8999987322    37788999999999999999999988777777777665543321 124556788999999999999


Q ss_pred             CCCCCcHHHHhcCcccC
Q 033880           76 PLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~   92 (109)
                      -..||+..++++|||++
T Consensus       270 ~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  270 YEQRPSTEELLKHPFIT  286 (953)
T ss_pred             cccCcchhhhccCCccc
Confidence            99999999999999998

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.1e-11  Score=73.66  Aligned_cols=86  Identities=22%  Similarity=0.433  Sum_probs=70.0

Q ss_pred             CCCcceecCCC--CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSG--CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~--~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      |+||.+.....  --..+|+|||++++||+.+...||....+.++-..+...+..+..|+.++.....||.-|+..+|.+
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgk  432 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGK  432 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCc
Confidence            67887764331  2357999999999999999999998877776665555555556788999999999999999999999


Q ss_pred             CCcHHHHh
Q 033880           79 RPTAVKLL   86 (109)
Q Consensus        79 R~~~~~~l   86 (109)
                      ||.++.++
T Consensus       433 rpkfdmiv  440 (448)
T KOG0195|consen  433 RPKFDMIV  440 (448)
T ss_pred             CCCcceeh
Confidence            99998875

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=6.2e-12  Score=74.72  Aligned_cols=91  Identities=27%  Similarity=0.450  Sum_probs=66.7

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC------------------------CCC-
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL------------------------PTI-   56 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------~~~-   56 (109)
                      |||.+.+.+.|+...|+||+||++.|++.++..|...++..++..+......                        |.. 
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~  304 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ  304 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc
Confidence            7999999888999999999999999999998888776655544333111110                        111 


Q ss_pred             -------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           57 -------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        57 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                             +.....+...++.+++..+|++|.+..+.+.|++..
T Consensus       305 vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~  347 (449)
T KOG0664|consen  305 RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE  347 (449)
T ss_pred             ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence                   112234556677889999999999999999998764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.20  E-value=8e-12  Score=76.99  Aligned_cols=94  Identities=30%  Similarity=0.463  Sum_probs=64.8

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHh--------------hCCC-------CC------
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKI--------------GNSK-------EL------   53 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~~--------------~~~~-------~~------   53 (109)
                      |||++..-...++++|+||.|+++..++++..||... +...++..+              ..+.       ..      
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~  324 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPEL  324 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHH
Confidence            7888875555788999999999999999999998322 111111000              0000       00      


Q ss_pred             ----------------------CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           54 ----------------------PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        54 ----------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                                            .......+..+.+++.+|+..+|.+|++++++|+||||....
T Consensus       325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence                                  000112345788999999999999999999999999998543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=5.7e-12  Score=82.39  Aligned_cols=95  Identities=23%  Similarity=0.335  Sum_probs=70.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH-HHh--hCCCC----CCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKI--GNSKE----LPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~-~~~--~~~~~----~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++....+.....|+|++|++++.|..|+.||.-....+.. ...  ..+..    ........+...+.+|.++|+
T Consensus       491 ~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~  570 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQ  570 (601)
T ss_pred             cCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHcc
Confidence            58999987776677899999999999999999998654332221 111  00000    012234567788999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      .+|.+|.+++++++.+|++.+.
T Consensus       571 ~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  571 LDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             CChhheecHHHHhhChHhhhcc
Confidence            9999999999999999998764

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.08  E-value=3.1e-10  Score=77.07  Aligned_cols=96  Identities=25%  Similarity=0.329  Sum_probs=74.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++..++ |+..+|+|++|+++|+.+.|..||.+......+...+..... +.-....+.+.++++.++|..+|..|
T Consensus       225 iaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~R  303 (1205)
T KOG0606|consen  225 IAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCR  303 (1205)
T ss_pred             cChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhh
Confidence            5788886655 999999999999999999999999988666655554433332 12234567899999999999999999


Q ss_pred             C---cHHHHhcCcccCCCCCc
Q 033880           80 P---TAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        80 ~---~~~~~l~~~~~~~~~~~   97 (109)
                      .   .+-++.+|.||+.....
T Consensus       304 lgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  304 LGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             cccchhhhhhhccceeecccc
Confidence            5   56678899999876443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.03  E-value=2e-10  Score=74.93  Aligned_cols=94  Identities=39%  Similarity=0.645  Sum_probs=71.8

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CC--CCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TI--PDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||+-.  ...+|+..+|+|++|+...++.--++|.....+...++.+......+ ..  ....++.+++|++.++..+
T Consensus       179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altkn  258 (829)
T KOG0576|consen  179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKN  258 (829)
T ss_pred             cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCC
Confidence            7888764  23459999999999998888877777765556666665554444433 22  3345778999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |++||+++.+++|+|....
T Consensus       259 pKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  259 PKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             CccCCChhhheeceeeccc
Confidence            9999999999999998765

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.96  E-value=8.1e-10  Score=70.14  Aligned_cols=86  Identities=24%  Similarity=0.303  Sum_probs=57.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      |+||.+.+.. |+.++|||+||++++|+++-   |...............+..|+.-..-.+.-..|+..++.++|..||
T Consensus       429 msPEQi~g~~-y~~kvdIyaLGlil~EL~~~---f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP  504 (516)
T KOG1033|consen  429 MSPEQIRGQQ-YSEKVDIYALGLILAELLIQ---FSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERP  504 (516)
T ss_pred             CCHHHHhhhh-hhhhcchhhHHHHHHHHHHH---hccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCc
Confidence            7899998777 99999999999999999882   3322222222222233333311122234567899999999999999


Q ss_pred             cHHHHhcCcc
Q 033880           81 TAVKLLDHPF   90 (109)
Q Consensus        81 ~~~~~l~~~~   90 (109)
                      ++-+.-.|.|
T Consensus       505 ~~~~~~~~~~  514 (516)
T KOG1033|consen  505 SAIEVALHEF  514 (516)
T ss_pred             hHHHHhhhhh
Confidence            7766655554

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.89  E-value=2.1e-09  Score=61.74  Aligned_cols=48  Identities=38%  Similarity=0.619  Sum_probs=37.3

Q ss_pred             CCCccee---cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh
Q 033880            1 MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG   48 (109)
Q Consensus         1 ~apE~~~---~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~   48 (109)
                      ||||.+.   ++..|+.++|+||+|+++.|+.+++.||.............
T Consensus       215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv  265 (282)
T KOG0984|consen  215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV  265 (282)
T ss_pred             CChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence            7888775   23369999999999999999999999998765444444333

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=3e-09  Score=66.21  Aligned_cols=86  Identities=22%  Similarity=0.402  Sum_probs=54.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-----hHHHH--HHhhCCCC---C-CCCC-CCCC--HH---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-----GVAAM--FKIGNSKE---L-PTIP-DDLS--DE---   63 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-----~~~~~--~~~~~~~~---~-~~~~-~~~~--~~---   63 (109)
                      +|||++.... .+.++|+||||+++.|+++|+.+.....     ....+  ..+.....   . +... ....  ..   
T Consensus       245 ~~PEy~~~g~-lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~  323 (361)
T KOG1187|consen  245 LAPEYASTGK-LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKK  323 (361)
T ss_pred             CChhhhccCC-cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHH
Confidence            5899886544 8899999999999999999997765321     01111  11111100   0 1111 1222  22   


Q ss_pred             HHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           64 GKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        64 ~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      +..+..+|++.+|..||++.++++
T Consensus       324 ~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  324 LAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHcCcCCCcCcCHHHHHH
Confidence            445567999999999999999754

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.88  E-value=2e-09  Score=69.63  Aligned_cols=88  Identities=31%  Similarity=0.471  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||.++   ++...+|+|++|++.+++++|..||.+    +....+...  .+..|......+.+++..++..+|.+|.
T Consensus       160 mApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~--~~~~p~~l~~~a~~~~~~l~~r~p~nrL  230 (612)
T KOG0603|consen  160 RAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA--ELEMPRELSAEARSLFRQLFKRNPENRL  230 (612)
T ss_pred             hhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh--ccCCchhhhHHHHHHHHHHHhhCHHHHh
Confidence            7899876   378899999999999999999999987    222222221  1245677888899999999999999996


Q ss_pred             c-----HHHHhcCcccCCCCCc
Q 033880           81 T-----AVKLLDHPFVKGAAPL   97 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~~~~   97 (109)
                      .     ..++++|++|..+...
T Consensus       231 g~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  231 GAGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             ccCcchhHHHhccchheeeeHh
Confidence            4     5688999999876444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.82  E-value=1.3e-08  Score=57.85  Aligned_cols=56  Identities=45%  Similarity=0.706  Sum_probs=47.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||.+.....++.+.|+|++|++++++                                 ....+++..|+..+|+.|+
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~R~  206 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQKDPEKRP  206 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhhCCcccCc
Confidence            3577665432477899999999999998                                 6788999999999999999


Q ss_pred             cHHHHhcCc
Q 033880           81 TAVKLLDHP   89 (109)
Q Consensus        81 ~~~~~l~~~   89 (109)
                      ++.++++++
T Consensus       207 ~~~~l~~~~  215 (215)
T cd00180         207 SAKEILEHL  215 (215)
T ss_pred             CHHHHhhCC
Confidence            999998763

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.79  E-value=1e-08  Score=64.17  Aligned_cols=83  Identities=19%  Similarity=0.330  Sum_probs=60.9

Q ss_pred             CCCcceecCC-----CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~-----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||+...-.     ..-.++|.|++|.+.||++...-||.+......-..-......|..+..++...++++..++..+
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~  497 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRD  497 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCC
Confidence            7888775221     12368999999999999999888886532211111123344567788999999999999999999


Q ss_pred             CCCCCcHH
Q 033880           76 PLNRPTAV   83 (109)
Q Consensus        76 p~~R~~~~   83 (109)
                      |++|++.+
T Consensus       498 pskRvsp~  505 (598)
T KOG4158|consen  498 PSKRVSPN  505 (598)
T ss_pred             ccccCCcc
Confidence            99998755

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.70  E-value=3.5e-08  Score=68.05  Aligned_cols=84  Identities=23%  Similarity=0.357  Sum_probs=58.3

Q ss_pred             CCCcceecCC----------CCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCC-CC--CCCCCCHHHHH
Q 033880            1 MAPEVIKNSS----------GCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKEL-PT--IPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~----------~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~   66 (109)
                      +|||.+....          ..+++-||||+||++.|++. |+++|..    .++..+..+... +.  ....-+...++
T Consensus       194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rn  269 (1431)
T KOG1240|consen  194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGNADDPEQLLEKIEDVSLRN  269 (1431)
T ss_pred             cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccCccCHHHHHHhCcCccHHH
Confidence            5777765311          25678999999999999999 7888852    333344333211 00  11123457889


Q ss_pred             HHHHHhhhCCCCCCcHHHHhcC
Q 033880           67 FIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      ++..|++.+|++|.++++.++.
T Consensus       270 lil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  270 LILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHccCchhccCHHHHHHh
Confidence            9999999999999999998865

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.62  E-value=1.3e-07  Score=64.99  Aligned_cols=96  Identities=27%  Similarity=0.351  Sum_probs=77.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++||...+.. ....+|+|+.|+.+++.++|.+||........+..+......+ ..+...+...++++..++..++.+|
T Consensus      1002 laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred             cCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence            4688776544 7889999999999999999999999888777777766655432 3455678889999999999999999


Q ss_pred             CcHH---HHhcCcccCCCCCc
Q 033880           80 PTAV---KLLDHPFVKGAAPL   97 (109)
Q Consensus        80 ~~~~---~~l~~~~~~~~~~~   97 (109)
                      ..+.   ++..|+||+.+...
T Consensus      1081 ~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             cCcccccccccCCccCCCCcc
Confidence            8777   88899999876443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.52  E-value=3.1e-07  Score=53.02  Aligned_cols=51  Identities=33%  Similarity=0.462  Sum_probs=36.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-YEGVAAMFKIGNSK   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~   51 (109)
                      ++||.+.....++.++|+|++|++++++++|+.||.. .+........+..+
T Consensus       166 ~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      166 LAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             CCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence            4677663223477799999999999999999999976 44444444444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.48  E-value=4.2e-07  Score=58.44  Aligned_cols=86  Identities=20%  Similarity=0.347  Sum_probs=58.3

Q ss_pred             CCcceecCC--C----CCchHHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHhhCCCCC---CCCC-C-CCCHHHHH
Q 033880            2 APEVIKNSS--G----CNLAVDIWSLGCTVLEMATTKPPWSQYE----GVAAMFKIGNSKEL---PTIP-D-DLSDEGKD   66 (109)
Q Consensus         2 apE~~~~~~--~----~~~~~d~ws~g~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~   66 (109)
                      |||.+....  .    .+.+.|+||+|++++|++....||....    .......+......   |... . ........
T Consensus       119 aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~  198 (484)
T KOG1023|consen  119 APELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLL  198 (484)
T ss_pred             CHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHH
Confidence            688776421  1    3667999999999999999999986532    22233333331221   2111 1 34456888


Q ss_pred             HHHHHhhhCCCCCCcHHHHhc
Q 033880           67 FIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      ++..||..+|..||+++++-.
T Consensus       199 l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  199 LVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             HHHHhcccChhhCccHHHHHh
Confidence            999999999999999998753

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.37  E-value=1.5e-07  Score=62.02  Aligned_cols=38  Identities=32%  Similarity=0.652  Sum_probs=32.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY   38 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~   38 (109)
                      ++||++..+..|+..+|.||+||++|+..+|..||...
T Consensus       190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            47888865566999999999999999999999998643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.35  E-value=5.8e-07  Score=54.39  Aligned_cols=62  Identities=27%  Similarity=0.379  Sum_probs=41.6

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ++.+.|.|++|+++|.+.++..||...........     ...... .+++..+.|+..+|..+|.+|
T Consensus       227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             eeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            68899999999999999999999975532211110     111112 678999999999999999887

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=2.5e-06  Score=54.10  Aligned_cols=87  Identities=26%  Similarity=0.413  Sum_probs=51.6

Q ss_pred             CCCcceecCC---CCC--chHHHHHHHHHHHHHHhC----------CCCCCCchh----HHHHHH-hhCCCCCCCCCC--
Q 033880            1 MAPEVIKNSS---GCN--LAVDIWSLGCTVLEMATT----------KPPWSQYEG----VAAMFK-IGNSKELPTIPD--   58 (109)
Q Consensus         1 ~apE~~~~~~---~~~--~~~d~ws~g~~~~~~~~g----------~~p~~~~~~----~~~~~~-~~~~~~~~~~~~--   58 (109)
                      ||||++-+..   .|.  .-+||||||.++||+..+          +.||...-+    ...... .......|..|.  
T Consensus       387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW  466 (513)
T KOG2052|consen  387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW  466 (513)
T ss_pred             cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc
Confidence            8999985332   122  359999999999998652          245543211    111111 122222233222  


Q ss_pred             -CCC--HHHHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           59 -DLS--DEGKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        59 -~~~--~~~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                       ..+  .....+|+.||..+|..|.++-.+.+
T Consensus       467 ~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  467 KSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence             221  23567899999999999998877654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.07  E-value=3.9e-06  Score=53.55  Aligned_cols=84  Identities=23%  Similarity=0.317  Sum_probs=49.3

Q ss_pred             CCCcceecCCCCC-----chHHHHHHHHHHHHHHhCCCC------------CCCc---h-hHHHHHHh-hCCCCCCCCC-
Q 033880            1 MAPEVIKNSSGCN-----LAVDIWSLGCTVLEMATTKPP------------WSQY---E-GVAAMFKI-GNSKELPTIP-   57 (109)
Q Consensus         1 ~apE~~~~~~~~~-----~~~d~ws~g~~~~~~~~g~~p------------~~~~---~-~~~~~~~~-~~~~~~~~~~-   57 (109)
                      ||||++.+...+.     ...|+||+|.++||++++-.-            |...   . ..+..... ......|.++ 
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh
Confidence            8999997543333     368999999999999985422            2100   0 01111111 1111112222 


Q ss_pred             --C--CCCHHHHHHHHHHhhhCCCCCCcHHH
Q 033880           58 --D--DLSDEGKDFIRLCLQRNPLNRPTAVK   84 (109)
Q Consensus        58 --~--~~~~~~~~l~~~~l~~~p~~R~~~~~   84 (109)
                        .  ....-+.+.+..||..|++.|.++.=
T Consensus       465 ~W~~h~~~~~l~et~EeCWDhDaeARLTA~C  495 (534)
T KOG3653|consen  465 AWRKHAGMAVLCETIEECWDHDAEARLTAGC  495 (534)
T ss_pred             hhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence              1  12345678889999999999998763

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.94  E-value=2.2e-06  Score=56.82  Aligned_cols=103  Identities=21%  Similarity=0.254  Sum_probs=70.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhC--CCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGN--SKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      .|||++.+. ..+.++|++|+|+++|.+.. |+..+..............  ...........+.+..+-+.+++..+..
T Consensus       176 ~apE~~~~~-~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~  254 (700)
T KOG2137|consen  176 LAPEYLLGT-TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSA  254 (700)
T ss_pred             ccchhhccc-cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcc
Confidence            478888663 37889999999999999886 5444433322211111111  1111233466788999999999999999


Q ss_pred             CCCcHHHHhcCcccCCCCCcccccccc
Q 033880           78 NRPTAVKLLDHPFVKGAAPLERTILAP  104 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~~~~~~~~~~~  104 (109)
                      .||++..+...+||......+-..+.+
T Consensus       255 ~rp~~~~l~~~~ff~D~~~~aLrfLD~  281 (700)
T KOG2137|consen  255 VRPTLDLLLSIPFFSDPGLKALRFLDD  281 (700)
T ss_pred             cCcchhhhhcccccCCchhhhhhhccc
Confidence            999999999999998876555554443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.94  E-value=0.00014  Score=43.81  Aligned_cols=93  Identities=27%  Similarity=0.394  Sum_probs=61.8

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHH-HHhhCCCCC---CCCCCCC----CHHHHHH
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAM-FKIGNSKEL---PTIPDDL----SDEGKDF   67 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~-~~~~~~~~~---~~~~~~~----~~~~~~l   67 (109)
                      ++||.+...  ..+....|+|++|+++++++.|..||.....   .... ..+......   .......    .....++
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDL  254 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHH
Confidence            478877653  3478899999999999999999998766542   2222 222222111   1111111    1568899


Q ss_pred             HHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           68 IRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        68 ~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                      +..++..+|..|.+..+...+.+...
T Consensus       255 ~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         255 LKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HHHHHhcCchhcCCHHHHhhchHhhC
Confidence            99999999999999888777655443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.83  E-value=3.2e-06  Score=56.09  Aligned_cols=93  Identities=25%  Similarity=0.336  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH-HHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||...+..+.....|+|++|+++..++.|..|.......... ........  ....+........+++.+++..+|.
T Consensus       196 ~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~  275 (601)
T KOG0590|consen  196 GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPS  275 (601)
T ss_pred             CCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCch
Confidence            47887765445678899999999999999999887654332222 11111111  1233566778888999999999999


Q ss_pred             CCCcHHHHhcCcccCC
Q 033880           78 NRPTAVKLLDHPFVKG   93 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~   93 (109)
                      .|.+.+++..++|+..
T Consensus       276 ~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  276 NRLSIEELKLDNWLSS  291 (601)
T ss_pred             hccccccccccccccc
Confidence            9999999999999988

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.29  E-value=4.5e-05  Score=50.31  Aligned_cols=36  Identities=28%  Similarity=0.524  Sum_probs=31.3

Q ss_pred             CCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Q 033880            2 APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ   37 (109)
Q Consensus         2 apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~   37 (109)
                      |||++.+..+-+...|||++|+++|.+....-||.+
T Consensus       736 apevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  736 APEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             chhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            899998888778889999999999999998777753

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.20  E-value=0.00013  Score=44.24  Aligned_cols=69  Identities=20%  Similarity=0.360  Sum_probs=44.8

Q ss_pred             CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH---HHhhCCCCCCCCC---CCCCHHHHHHHHHHhhhCCCCC
Q 033880           11 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPTIP---DDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus        11 ~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ..++.+|+|.||++++..++|.+|+......+..   .....++..+..|   ..+++.+..+.++-+..++++|
T Consensus       201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR  275 (378)
T ss_pred             EecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence            3678899999999999999999999743221111   1112222222333   3356667777778888888887

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.85  E-value=0.0008  Score=42.04  Aligned_cols=77  Identities=30%  Similarity=0.316  Sum_probs=46.4

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcc
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF   90 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~   90 (109)
                      .+..+|||++|....+|-.+..--...... ..-..+...     .-..-+..-++++.+|+..+|..||++++++.||.
T Consensus       259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~-----i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpl  333 (458)
T KOG1266|consen  259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANV-----IIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPL  333 (458)
T ss_pred             cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhh-----eeeccCccccCcCcccccCCCCCCcchhhhhcCce
Confidence            356799999999888887765431111100 000000000     00011223356778999999999999999999987


Q ss_pred             cCC
Q 033880           91 VKG   93 (109)
Q Consensus        91 ~~~   93 (109)
                      .-.
T Consensus       334 lfe  336 (458)
T KOG1266|consen  334 LFE  336 (458)
T ss_pred             eee
Confidence            543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.36  E-value=0.021  Score=37.91  Aligned_cols=90  Identities=20%  Similarity=0.122  Sum_probs=56.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ++||..++  .++...|++++|.++.+...+........ ...+...........+-...+......+..++..++..|+
T Consensus       295 ~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~-~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~  371 (524)
T KOG0601|consen  295 AAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGK-NSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRL  371 (524)
T ss_pred             eChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCC-CCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhh
Confidence            35665532  37889999999999999888765543220 0111111111111122223344555577889999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      +++.++.++++..
T Consensus       372 ~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  372 TAQILTALNVIHS  384 (524)
T ss_pred             HHHHHhccccccc
Confidence            9999998887763

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.94  E-value=0.021  Score=38.27  Aligned_cols=82  Identities=17%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC----------CCCCCCHHHHHHHHHHhhhCCCCCCc
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----------IPDDLSDEGKDFIRLCLQRNPLNRPT   81 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~l~~~p~~R~~   81 (109)
                      ..+|+|+|++|.++.++.-|...+...........+......+.          +...++.....+...|+...|..||.
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            34799999999999998888765543332222211111111000          01124555667778899999999998


Q ss_pred             HHHHhcCcccCC
Q 033880           82 AVKLLDHPFVKG   93 (109)
Q Consensus        82 ~~~~l~~~~~~~   93 (109)
                      ..++.++.-|..
T Consensus       188 ~~~~~k~~i~~e  199 (725)
T KOG1093|consen  188 PMELSKRCSFTE  199 (725)
T ss_pred             hhHHhcCccHHH
Confidence            878777776653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=93.04  E-value=1.2  Score=27.83  Aligned_cols=75  Identities=19%  Similarity=0.077  Sum_probs=47.8

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH---HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHh
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLL   86 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l   86 (109)
                      .+.+.|+||++.++.++..|..|+.+.......   ................+.....++..+-..+-..+|....+.
T Consensus       214 ~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~  291 (322)
T KOG1164|consen  214 QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLA  291 (322)
T ss_pred             cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence            568899999999999999999998765432221   111111111112233456677777766667788888766653

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.44  E-value=0.21  Score=32.98  Aligned_cols=73  Identities=16%  Similarity=0.240  Sum_probs=45.2

Q ss_pred             CCchHHHHHHHHHHHHHHh-CCCCCCCchhH-------H--H---HHHhh----CCCCCCC--C-CCCCCHHHHHHHHHH
Q 033880           12 CNLAVDIWSLGCTVLEMAT-TKPPWSQYEGV-------A--A---MFKIG----NSKELPT--I-PDDLSDEGKDFIRLC   71 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~-------~--~---~~~~~----~~~~~~~--~-~~~~~~~~~~l~~~~   71 (109)
                      .+...|.|++|+++++++. |+.||.+....       +  +   .+.+.    .....++  . ....+++...+..+|
T Consensus       198 r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qa  277 (637)
T COG4248         198 RTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQA  277 (637)
T ss_pred             CCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHH
Confidence            5678999999999999988 58999775311       1  0   00010    1111111  0 123567788888888


Q ss_pred             hhhC--CCCCCcHHH
Q 033880           72 LQRN--PLNRPTAVK   84 (109)
Q Consensus        72 l~~~--p~~R~~~~~   84 (109)
                      +...  ++-||+++.
T Consensus       278 F~~~~~~~~RP~a~a  292 (637)
T COG4248         278 FTESGVATPRPTAKA  292 (637)
T ss_pred             hcccCCCCCCCCHHH
Confidence            8654  568998765

>cd00059 FH Forkhead (FH), also known as a "winged helix"

Probab=86.15  E-value=2.2  Score=21.05  Aligned_cols=40  Identities=18%  Similarity=0.299  Sum_probs=30.6

Q ss_pred             HHHHHHHHhhhCCCCCCcHHHHhc-----CcccCCCCCccccccc
Q 033880           64 GKDFIRLCLQRNPLNRPTAVKLLD-----HPFVKGAAPLERTILA  103 (109)
Q Consensus        64 ~~~l~~~~l~~~p~~R~~~~~~l~-----~~~~~~~~~~~~~~~~  103 (109)
                      ...++...+...|+++.+..||-+     .|||+......++.+.
T Consensus         6 Y~~LI~~Ai~~sp~~~lTL~eIy~~I~~~~pyyr~~~~gWknSIR   50 (78)
T cd00059           6 YSALIAMAIQSSPEKRLTLSEIYKWISDNFPYFRDAPAGWQNSIR   50 (78)
T ss_pred             HHHHHHHHHHhCCCCCeeHHHHHHHHHHhCCccccCCCCCcccee
Confidence            456788888889999999999753     7888887666665543

FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=84.28  E-value=4.6  Score=30.42  Aligned_cols=76  Identities=22%  Similarity=0.336  Sum_probs=48.7

Q ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           13 NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        13 ~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                      ....|+|.+|.....+..|...-........           -.+........+...+|+.-+++.|+++.+++.|+|.+
T Consensus       370 ~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~-----------~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  370 SRLTDLWCLGLLLLQLSQGEDISEKSAVPVS-----------LLDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLR  438 (1351)
T ss_pred             hhhhHHHHHHHHHhhhhhcCcccccccchhh-----------hhccccchhhhhhhhhhcchhhhhccchhhhhhchhcc
Confidence            3457999999998888776432111100000           01111222556677789999999999999999999987


Q ss_pred             CCCCccc
Q 033880           93 GAAPLER   99 (109)
Q Consensus        93 ~~~~~~~   99 (109)
                      .....+.
T Consensus       439 ~~~~~~~  445 (1351)
T KOG1035|consen  439 FPTDNES  445 (1351)
T ss_pred             ccccccc
Confidence            6555444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	109
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-17
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-15
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-13
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-13
3a7f_A	303	Human Mst3 Kinase Length = 303		6e-13
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-13
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-13
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		7e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-13
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-12
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-12
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-12
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-10
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		4e-10
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		4e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-09
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-09
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-09
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-09
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		6e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-08
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		3e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-08
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-08
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		4e-08
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		4e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-08
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		5e-08
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-07
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-07
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-07
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-06
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-06
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-06
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-06
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-06
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-06
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-06
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-06
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		9e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		9e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-05
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-05
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		4e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		4e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		7e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		7e-05
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		7e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		7e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		7e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		7e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-05
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		7e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		7e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		8e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		8e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		8e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-04
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-04
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-04
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		5e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		5e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		5e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		5e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		6e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		6e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		6e-04
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		6e-04
3gni_B	389	Structure Of Strad And Mo25 Length = 389		6e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-04
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		9e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-04
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		9e-04

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 1   MAPEVI-KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPD 58
           MAPE+I K   G   A DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT 100
            +S E K FI  C + +P  R  A  LL   F+K ++  ++T
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKT 291

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 1   MAPEVI-KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPD 58
           MAPE+I K   G   A DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 235
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            +S E K FI  C + +P  R  A  LL   F+K
Sbjct: 236 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEVI+   G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+
Sbjct: 192 MAPEVIQ-EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP-PTFRKPE 249
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 94
             SD   DF++ CL ++P  R TA +LL HPFV+ A
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+       +  +   DIWSLG T++EMA  +PP  +   +  + KI  S + PT+
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTL 242
Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S E +DF+++ L +NP  RP+A +LL+HPFV
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+       +  +   DIWSLG T++EMA  +PP  +   +  + KI  S + PT+
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTL 234
Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S E +DF+++ L +NP  RP+A +LL+HPFV
Sbjct: 235 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 186 MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 243
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL + P  RPTA +LL H F+
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 171 MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 228
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL + P  RPTA +LL H F+
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 171 MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 228
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL + P  RPTA +LL H F+
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 191 MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 248
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL + P  RPTA +LL H F+
Sbjct: 249 SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S+  +   DIWSLG T +E+A  +PP S    +  +F I  +   PT+    
Sbjct: 183 MAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-PTLEGQH 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           S   K+F+  CL ++P  RPTA +LL H F+
Sbjct: 241 SKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+ S+  +   DIWSLG T +E+A  +PP S    +  +F I  +   PT+  D 
Sbjct: 187 MAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-PTLVGDF 244
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           +   K+FI  CL ++P  RPTA +LL H F+
Sbjct: 245 TKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDD 59
           MAPEV++   G +   DIWS G T +E+AT   P+ +Y  +   M  + N  + P++   
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN--DPPSLETG 250
Query: 60  LSDE------GKDF---IRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
           + D+      GK F   I LCLQ++P  RPTA +LL H F + A   E
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDD 59
           MAPEV++   G +   DIWS G T +E+AT   P+ +Y  +   M  + N  + P++   
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN--DPPSLETG 245
Query: 60  LSDE------GKDF---IRLCLQRNPLNRPTAVKLLDHPFVKGA 94
           + D+      GK F   I LCLQ++P  RPTA +LL H F + A
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  ++       
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 276
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             S+  ++F+  CLQ+ P +RPT+  LL H FV
Sbjct: 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  ++       
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 237
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             S+  ++F+  CLQ+ P +RPT+  LL H FV
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 1   MAPEVIKNSSG----CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+   +      +   D+WSLG T++EMA  +PP  +   +  + KI  S E PT+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTL 260
Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S   KDF++ CL++N   R T  +LL HPFV
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 1   MAPEVIKNSSG----CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+   +      +   D+WSLG T++EMA  +PP  +   +  + KI  S E PT+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTL 260
Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S   KDF++ CL++N   R T  +LL HPFV
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 1   MAPEVIKNSSG----CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+   +      +   D+WSLG T++EMA  +PP  +   +  + KI  S E PT+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTL 260
Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             P   S   KDF++ CL++N   R T  +LL HPFV
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI         VDIWSLG  V+EM   +PP+     + AM +I +S  LP    DL
Sbjct: 208 MAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS--LPPRVKDL 264
Query: 61  ---SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              S   + F+ L L R P  R TA +LL HPF+K A P
Sbjct: 265 HKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGP 303

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI  S      VDIWSLG  V+EM   +PP+     V AM ++ +S      P  L
Sbjct: 208 MAPEVISRSLYAT-EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-----PPKL 261
Query: 61  SDEGK------DFIRLCLQRNPLNRPTAVKLLDHPFV 91
            +  K      DF+   L R+P  R TA +LLDHPF+
Sbjct: 262 KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 1   MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           MAPE I    N  G ++  DIWSLG T++E+A  + P+  +       K    +  P +P
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 279
Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            D  S E  DF   CL++N   RPT  +L+ HPF
Sbjct: 280 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 1   MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP 57
           MAPE I    N  G ++  DIWSLG T++E+A  + P+  +       K    +  P +P
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            D  S E  DF   CL++N   RPT  +L+ HPF
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I  +   EL   P+
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 240
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +LL H F+K A PL
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPL 279

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I  +   EL   P+
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 241
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +L+ H F+K A PL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPL 280

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I  +   EL   P+
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 241
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL+ +   R +A +L+ H F+K A PL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPL 280

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I  +   EL   P+
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 240
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL  +   R +A +LL H F+K A PL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPD 58
           MAPEV+   +     VDIWSLG   +EM   +PP+     + A++ I  +   EL   P+
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PE 240
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            LS   +DF+  CL  +   R +A +LL H F+K A PL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 2   APEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP- 57
           APE I    N  G ++  DIWSLG T +E+A  + P+  +       K    +  P +P 
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 263
Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
           D  S E  DF   CL++N   RPT  +L  HPF
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI       +  +   D+WSLG T +EMA   PP      + A+F I  +      
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK 255
Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
               S + + FI  CL +N   RP   +L+ HPF++   P ER +
Sbjct: 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD-QPNERQV 299

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 237 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 295
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 296 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 236 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 278

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 314 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 372
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 373 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 194 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 252
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 253 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 289

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 192 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 250
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 251 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 287

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 17/103 (16%)
Query: 1   MAPEVIKNSS---GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF---------KIG 48
           MAPE I  S+   G ++  D+WSLG T+ E+AT + P+ ++  V             ++ 
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLS 251
Query: 49  NSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           NS+E    P  +     +F+ LCL ++   RP   +LL HPF+
Sbjct: 252 NSEEREFSPSFI-----NFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 183 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 241
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 242 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----KELPT 55
           MAPE+I         VDIWSLG  V+EM   +PP+     + AM  I ++     K L  
Sbjct: 187 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 245
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           +   L    K F+   L R+P  R TA +LL HPF+  A P
Sbjct: 246 VSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 282

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 283 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 283 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--IGNSKELPT-IP 57
           +APEV+        AVD WS+G     +    PP+   E  A +F+  +    E  +   
Sbjct: 185 VAPEVLAQKPYSK-AVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYW 242
Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           DD+SD  KDFIR  ++++P  R T  + L HP++ G   L++ I
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNI 286

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--IGNSKELPT-IP 57
           +APEV+        AVD WS+G     +    PP+   E  A +F+  +    E  +   
Sbjct: 185 VAPEVLAQKPYSK-AVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYW 242
Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           DD+SD  KDFIR  ++++P  R T  + L HP++ G   L++ I
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNI 286

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--IGNSKELPT-IP 57
           +APEV+        AVD WS+G     +    PP+   E  A +F+  +    E  +   
Sbjct: 185 VAPEVLAQKPYSK-AVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYW 242
Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           DD+SD  KDFIR  ++++P  R T  + L HP++ G   L++ I
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNI 286

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--D 58
           +APEV+        AVD WS+G     +    PP+          +I  ++     P  D
Sbjct: 185 VAPEVLAQKPYSK-AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           D+SD  KDFIR  ++++P  R T  + L HP++ G   L++ I
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNI 286

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 283 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG-NSKELPTIPDD 59
           ++PE I   S   L  D+WSLGC    +   +PP+        + K+     E+P+    
Sbjct: 179 ISPE-IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--- 234
Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           LS E KD I   L+RNP +R +   +LDHPF+
Sbjct: 235 LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKELPTIP 57
           M+PE ++ +   ++  DIWS+G +++EMA  + P     G  A+F++ +   ++  P +P
Sbjct: 189 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLP 247
Query: 58  DD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
               S E +DF+  CL +NP  R    +L+ H F+K
Sbjct: 248 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF---KIGNSKELPTIP 57
           +APEV+        AVD WS+G     +    PP+ + E  + +F   K G  +      
Sbjct: 174 VAPEVLAQKPYSK-AVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEGYYEFESPFW 231
Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           DD+S+  KDFI   L+++P  R T  K L HP++ G   L R I
Sbjct: 232 DDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDI 275

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 234
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 235 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 277

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 238
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 239 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 281

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 255 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPE I          ++  D+WSLG +++E+AT + P+   +    +      +E P +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 57  PDDLSDEG--KDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
           P  +   G  + F++ CL ++   RP   KLL+H F+K    LE
Sbjct: 251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 1   MAPEVIKNSSGCN----------LAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFK 46
           M PE IK+ S                D+WSLGC +  M   K P+    +Q   + A+  
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 47  IGNSKELPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +  E P IP+ DL    +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 255 PNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMFKIGNSKELPTIP-D 58
           M+PE I + +G N   DIWSLGC + EMA  + P +     + ++ K     + P +P D
Sbjct: 203 MSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
             S+E +  + +C+  +P  RP    + D
Sbjct: 262 HYSEELRQLVNMCINPDPEKRPDVTYVYD 290

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--D 58
           +APEV+        AVD WS+G     +    PP+          +I  ++     P  D
Sbjct: 189 VAPEVLAQKPYSK-AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWD 247
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
           D+SD  KDFIR  ++++P  R T  +   HP++ G   L + I
Sbjct: 248 DISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNI 290

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE + N    N   DIWSLGC + E+    PP++ +       KI   K    IP   
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRY 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SDE  + I   L     +RP+  ++L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE++  S G N AVD WSLG  + +M T  PP++       + KI   K    +P  L
Sbjct: 188 MAPEILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLPPYL 244
Query: 61  SDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVK 92
           + E +D ++  L+RN  +R       A ++  HPF +
Sbjct: 245 TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+    G +  VDIWSLGC +  +   KPP+          +I  ++   ++P  +
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHI 265
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAPLE 98
           +      IR  L  +P  RP+  +LL D  F  G AP+ 
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE + N    N   DIWSLGC + E+    PP++ +       KI   K    IP   
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRY 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SDE  + I   L     +RP+  ++L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+    G +  VDIWSLGC +  +   KPP+          +I  ++   ++P  +
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHI 265
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAPLE 98
           +      IR  L  +P  RP+  +LL D  F  G AP+ 
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE + N    N   DIWSLGC + E+    PP++ +       KI   K    IP   
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRY 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SDE  + I   L     +RP+  ++L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+    G +  VDIWSLGC +  +   KPP+          +I  ++   ++P  +
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHI 265
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAPLE 98
           +      IR  L  +P  RP+  +LL D  F  G AP+ 
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE++  S G N AVD WSLG  + +M T  PP++       + KI   K    +P  L
Sbjct: 188 MAPEILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLPPYL 244
Query: 61  SDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVK 92
           + E +D ++  L+RN  +R       A ++  HPF +
Sbjct: 245 TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+    G +  VDIWSLGC +  +   KPP+          +I  ++   ++P  +
Sbjct: 193 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHI 249
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAPLE 98
           +      IR  L  +P  RP+  +LL D  F  G AP+ 
Sbjct: 250 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 288

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+++    N   D++S G  + E+AT + PW        +  +G   +   IP +L
Sbjct: 206 MAPEVLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLD--HPFVKGAAP 96
           + +    I  C    P  RP+   ++D   P +K A P
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+++    N   D++S G  + E+AT + PW        +  +G   +   IP +L
Sbjct: 206 MAPEVLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLD--HPFVKGAAP 96
           + +    I  C    P  RP+   ++D   P +K A P
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 178 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 234
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 188 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 244
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 245 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 281

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           + PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +
Sbjct: 176 LPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFV 232
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           ++  +D I   L+ NP  RP   ++L+HP++
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 184 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 182 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 238
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 239 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 172 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 228
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 229 GARDLISRLLKHNPSQRPMLREVLEHPWI 257

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 184 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 174 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 230
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 231 GARDLISRLLKHNPSQRPMLREVLEHPWI 259

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 178 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 234
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 206 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 262
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 263 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 299

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 178 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 234
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           + PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +
Sbjct: 199 LPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFV 255
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           ++  +D I   L+ NP  RP   ++L+HP++
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 178 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 234
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+ +  G +  VD+WS+GC +  +   KPP+          +I  ++   +IP  +
Sbjct: 208 IAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHI 264
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLL-DHPFVKGAAP 96
           +      I+  LQ +P  RPT  +LL D  F  G  P
Sbjct: 265 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 180 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 236
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16  VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN 75
           VD+WSLG    E    KPP+          +I  S+   T PD +++  +D I   L+ N
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 76  PLNRPTAVKLLDHPFV 91
           P  RP   ++L+HP++
Sbjct: 250 PSQRPXLREVLEHPWI 265

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 180 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 236
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 179 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 235
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 236 GARDLISRLLKHNPSQRPMLREVLEHPWI 264

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 178 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 234
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           + PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +
Sbjct: 199 LPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFV 255
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           ++  +D I   L+ NP  RP   ++L+HP++
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 177 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 233
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+ N  G   + D WS G  + EM T   P+   +    M  I  +K    +P  L
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFL 249
Query: 61  SDEGKDFIRLCLQRNPLNRPTA 82
           S E +  +R+  +RNP NR  A
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGA 271

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 176 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 232
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 176 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 232
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 180 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 236
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+ N  G   + D WS G  + EM T   P+   +    M  I  +K    +P  L
Sbjct: 194 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFL 250
Query: 61  SDEGKDFIRLCLQRNPLNRPTA 82
           S E +  +R+  +RNP NR  A
Sbjct: 251 SPEAQSLLRMLFKRNPANRLGA 272

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 176 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 232
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 180 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 236
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16  VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN 75
           VD+WSLG    E    KPP+          +I  S+   T PD +++  +D I   L+ N
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 76  PLNRPTAVKLLDHPFV 91
           P  RP   ++L+HP++
Sbjct: 247 PSQRPMLREVLEHPWI 262

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16  VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN 75
           VD+WSLG    E    KPP+          +I  S+   T PD +++  +D I   L+ N
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHN 261
Query: 76  PLNRPTAVKLLDHPFV 91
           P  RP   ++L+HP++
Sbjct: 262 PSQRPMLREVLEHPWI 277

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+ N  G   + D WS G  + EM T   P+   +    M  I  +K    +P  L
Sbjct: 193 MAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFL 249
Query: 61  SDEGKDFIRLCLQRNPLNRPTA 82
           S E +  +R+  +RNP NR  A
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGA 271

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD--- 58
           APEV+  SS     VD+WS+GC   EM   KP +     V  + KI +   LP   D   
Sbjct: 187 APEVLLQSSYAT-PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 59  ----------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                 D+ + GKD +  CL  NP  R +A   L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD--- 58
           APEV+  SS     VD+WS+GC   EM   KP +     V  + KI +   LP   D   
Sbjct: 187 APEVLLQSSYAT-PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 59  ----------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                 D+ + GKD +  CL  NP  R +A   L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E    KPP+          +I  S+   T PD +++
Sbjct: 175 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI--SRVEFTFPDFVTE 231
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +D I   L+ NP  RP   ++L+HP++
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD--- 58
           APEV+  SS     VD+WS+GC   EM   KP +     V  + KI +   LP   D   
Sbjct: 187 APEVLLQSSYAT-PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 59  ----------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                 D+ + GKD +  CL  NP  R +A   L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV------AAMFKIGNS 50
           MAPEV++     ++  +   D+WSLG  +  M +  PP+  + G         + ++  +
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 51  KELPTI-------PD----DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           K   +I       PD     +S E KD I   L R+   R +A ++L HP+V+G AP
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAP 304

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEV+ N  G + + D WS G  + EM T   P+   +    M  I  +K    +P  L
Sbjct: 197 MAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--LGMPQFL 253
Query: 61  SDEGKDFIRLCLQRNPLNR 79
           S E +  +R   +RNP NR
Sbjct: 254 STEAQSLLRALFKRNPANR 272

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E     PP+  +       +I  S+   T PD +++
Sbjct: 179 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFTFPDFVTE 235
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
             +D I   L+ N   R T  ++L+HP++K 
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKA 266

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD 62
           PE+I+     +  VD+WSLG    E     PP+  +       +I  S+   T PD +++
Sbjct: 179 PEMIEGRMH-DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFTFPDFVTE 235
Query: 63  EGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
             +D I   L+ N   R T  ++L+HP++K 
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKA 266

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTK---PPWSQYEGVAAMFKIGNSKELPTIP 57
           M+PE ++ +   ++  DIWS+G +++EMA  +   PP + +E +  +     ++  P +P
Sbjct: 173 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV----NEPPPKLP 227
Query: 58  DD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
               S E +DF+  CL +NP  R    +L+ H F+K
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   E +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           ++PE+ +N    N + DIW+LGC + E+ T K  +        + KI  S   P +    
Sbjct: 192 LSPEICENKPYNNKS-DIWALGCVLYELCTLKHAFEAGSMKNLVLKI-ISGSFPPVSLHY 249
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
           S + +  +    +RNP +RP+   +L+  F+  A  +E+  L+P+L
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFI--AKRIEK-FLSPQL 292

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++ +   +   D+WS G  +  + +  PP+        + ++   K    +P   
Sbjct: 190 IAPEVLRGTY--DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            +SD+ KD IR  L  +P  R TA + L+HP+++
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---FKIGNSKELPT 55
           +APEV+ +  ++G N AVD WSLG  +    +  PP+S++    ++      G    +P 
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +  ++S++  D ++  L  +P  R T  + L HP+++
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1   MAPEVIK-----NSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVA-AMFKIGNSKEL 53
           +APE+I+     N  G    VD+WS G  +  +    PP W + + +   M   GN +  
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
               DD SD  KD +   L   P  R TA + L HPF +
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1   MAPEVIK-----NSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVA-AMFKIGNSKEL 53
           +APE+I+     N  G    VD+WS G  +  +    PP W + + +   M   GN +  
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
               DD SD  KD +   L   P  R TA + L HPF +
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1   MAPEVIK-----NSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVA-AMFKIGNSKEL 53
           +APE+I+     N  G    VD+WS G  +  +    PP W + + +   M   GN +  
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 236
Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
               DD SD  KD +   L   P  R TA + L HPF +
Sbjct: 237 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1   MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT 55
           +APE++K S      G    VD+W+ G  +  +    PP+     +  +  I   +   +
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 56  IP--DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            P  DD S   KD I   LQ +P  R TA + L HPF +
Sbjct: 326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 282
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 283 SSDLKDLLRNLLQ 295

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 254
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 255 SSDLKDLLRNLLQ 267

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 254
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 255 SSDLKDLLRNLLQ 267

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 282
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 283 SSDLKDLLRNLLQ 295

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 200 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 256
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 257 SSDLKDLLRNLLQ 269

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 282
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 283 SSDLKDLLRNLLQ 295

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 191 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 247
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 248 SSDLKDLLRNLLQ 260

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 192 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 248
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 249 SSDLKDLLRNLLQ 261

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 262
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 263 SSDLKDLLRNLLQ 275

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-----EGVAAMFKIGNSKELPT 55
           +APEV++   G + A DIWSLG  +  M T   P++       E + A    G       
Sbjct: 187 VAPEVLERQ-GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             + +SD  KD +   L  +P  R TA  +L HP++
Sbjct: 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++ +   +   D+WS G  +  + +  PP+        + ++   K    +P   
Sbjct: 190 IAPEVLRGTY--DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
            +SD+ KD IR  L  +P  R TA + L+HP+++  +  E
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 1   MAPEVIKNSSGCNLAV----DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---L 53
           ++PE+++   G         D WSLG  + EM   + P+     V    KI N KE    
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
Query: 54  PTIPDDLSDEGKDFIR--LCLQRNPLNRPTAVKLLDHPFVKG 93
           PT   D+S+  KD IR  +C + + L +        HPF  G
Sbjct: 303 PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+ +S  +   D+WS G  + E+ T + P+   +G+A  + +  +K    IP   
Sbjct: 181 MAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            +     +  C   +P +RP+   +LD 
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPSFTNILDQ 267

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++ +   +   D+WS G  +  + +  PP+        + ++   K    +P   
Sbjct: 190 IAPEVLRGTY--DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            +SD+ KD IR  L  +P  R TA + L+HP+++
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 28/123 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------------------------PWSQ 37
           AP+V+  S   + +VDIWS+GC   EM T KP                         W Q
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 38  YEGV----AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
            + +       F++   K   +I      EG D +   L  +P  R +A   ++HP+ K 
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 94  AAP 96
             P
Sbjct: 307 LDP 309

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 2   APEVIKNSSGCNLA--VDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSKELPTIP- 57
           APE+++   GC     VD+WS+G     +     P+    G   MF+ I N +     P 
Sbjct: 218 APEILR---GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW 274
Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
            D++S   KD +R  +  +P  R T  + L HP+V G A
Sbjct: 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 15  AVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSD-EGKDFIRLCLQ 73
           +VD+++ G   LE AT++ P+S+ +  A +++   S   P   D ++  E K+ I  C++
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIR 268
Query: 74  RNPLNRPTAVKLLDHPFVK 92
           +N   R +   LL+H F +
Sbjct: 269 QNKDERYSIKDLLNHAFFQ 287

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 28/123 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------------------------PWSQ 37
           AP+V+  S   + +VDIWS+GC   EM T KP                         W Q
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 38  YEGV----AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
            + +       F++   K   +I      EG D +   L  +P  R +A   ++HP+ K 
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 94  AAP 96
             P
Sbjct: 307 LDP 309

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 2   APEVIKNSSGCNL--AVDIWSLGCTVLE-MATTKPPWS-QYEGVAAMFK-IGNSKELPTI 56
           APE+++ S+   L  ++DI+S+GC     ++  K P+  +Y   + + + I +  E+  +
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 277
Query: 57  PD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
            D  L  E  D I   +  +PL RPTA+K+L HP
Sbjct: 278 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 2   APEVIKNSSGCNL--AVDIWSLGCTVLE-MATTKPPWS-QYEGVAAMFK-IGNSKELPTI 56
           APE+++ S+   L  ++DI+S+GC     ++  K P+  +Y   + + + I +  E+  +
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 277
Query: 57  PD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
            D  L  E  D I   +  +PL RPTA+K+L HP
Sbjct: 278 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-------------TKPPWSQYEGVAAMFKI 47
           M+PE ++ +   ++  DIWS+G +++EMA              ++PP + +E +  +   
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV-- 226
Query: 48  GNSKELPTIPDD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++  P +P    S E +DF+  CL +NP  R    +L+ H F+K
Sbjct: 227 --NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I  S G N AVD W+LG  + +MA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 1   MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELPTIP 57
           MAP++++   SG + AVD WSLG  + E+ T   P++      +  +I     K  P  P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286
Query: 58  DDLSDEGKDFIRLCLQRNPLNR 79
            ++S   KD I+  L ++P  R
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKR 308

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIG---NSKELPT 55
           AP+V+  S   +  +DIWS+GC   EM    P +   S+ + +  +F+I    NSK  P 
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 56  IPD---------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           + +                      L + G D +   L+ +P  R TA + L+H + K
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIG---NSKELPT 55
           AP+V+  S   +  +DIWS+GC   EM    P +   S+ + +  +F+I    NSK  P 
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 56  IPD---------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           + +                      L + G D +   L+ +P  R TA + L+H + K
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIG---NSKELPT 55
           AP+V+  S   +  +DIWS+GC   EM    P +   S+ + +  +F+I    NSK  P 
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 56  IPD---------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           + +                      L + G D +   L+ +P  R TA + L+H + K
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 182 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             +  + +  C    P +RPT V L D  F+  A P
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEAQP 274

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 182 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             +  + +  C    P +RPT V L D  F+  A P
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEAQP 274

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 192 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             +  + +  C    P +RPT V L D  F+  A P
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEAQP 284

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 192 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             +  + +  C    P +RPT V L D  F+  A P
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEAQP 284

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------- 54
           APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P       
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 55  --TIPDD------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             ++PD                   L ++G+  +   L  +P  R +A   L HPF +
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 186 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
             +  + +  C    P +RPT V L D  F+  A P +
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEAQPTD 280

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 186 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLD 87
             +  + +  C    P +RPT V L D
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVALRD 271

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           APE +K  +  + A D W  G T+ EM T  + PW    G   + KI    E    P+D 
Sbjct: 182 APESLKTRTFSH-ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLD 87
             +  + +  C    P +RPT V L D
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRD 267

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS----KELPTI 56
           MAPEV+   S C+  VD+WS  C +L M     PW+Q+       KI +     +E+P  
Sbjct: 258 MAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPS 316
Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKL 85
              L+ +    I+  L++ P++R +A +L
Sbjct: 317 CAPLTAQA---IQEGLRKEPIHRVSAAEL 342

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS----KELPTI 56
           MAPEV+   S C+  VD+WS  C +L M     PW+Q+       KI +     +E+P  
Sbjct: 239 MAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPS 297
Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKL 85
              L+ +    I+  L++ P++R +A +L
Sbjct: 298 CAPLTAQA---IQEGLRKEPIHRVSAAEL 323

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++     +   D+WS+G  +  +    PP+        + K+   K     P+  
Sbjct: 205 IAPEVLRKKY--DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK 262
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           ++S+  KD I+  LQ +   R +A + L+HP++K
Sbjct: 263 NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 1   MAPEVIKNSSGCNLA-VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           M PE   N S  N A VDIWSLG  +  M     P+S    +  +F    +K +    D 
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
Query: 60  ------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
                             LS+E  DF++L L++NP  R T+   L H ++
Sbjct: 277 NHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +AP +I  S G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 61  SDEGKDFIRLCLQ 73
           S + KD +R  LQ
Sbjct: 262 SSDLKDLLRNLLQ 274

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APE++ NS G   ++DIWS+GC + EM + +P
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++     +   D+WS G  +  +    PP+        + ++   K     PD  
Sbjct: 173 IAPEVLRKKY--DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT 230
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            +SDE K  ++L L   P  R +A + L+HP++
Sbjct: 231 QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 2   APEVIKNSSGCNL------AVDIWSLGCTVLE-MATTKPPW-SQYEGVAAMFK-IGNSKE 52
           APE+++ S+          ++DI+S+GC     ++  K P+  +Y   + + + I +  E
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE 259
Query: 53  LPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
           +  + D  L  E  D I   +  +PL RPTA+K+L HP
Sbjct: 260 MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 2   APEVIKNSSGCNL------AVDIWSLGCTVLE-MATTKPPW-SQYEGVAAMFK-IGNSKE 52
           APE+++ S+          ++DI+S+GC     ++  K P+  +Y   + + + I +  E
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE 259
Query: 53  LPTIPD-DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
           +  + D  L  E  D I   +  +PL RPTA+K+L HP
Sbjct: 260 MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-----YEGVAAMFKIGNSKELPT 55
           MAPEV+K        VD+W  G  +  + +   P+       +EG+      G  K  P 
Sbjct: 202 MAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK----GKYKMNPR 256
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
               +S+  KD +R  L  +P  R T  + L+HP++K        I  PE
Sbjct: 257 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPE 306

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-----YEGVAAMFKIGNSKELPT 55
           MAPEV+K        VD+W  G  +  + +   P+       +EG+      G  K  P 
Sbjct: 200 MAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK----GKYKMNPR 254
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
               +S+  KD +R  L  +P  R T  + L+HP++K        I  PE
Sbjct: 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPE 304

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-----YEGVAAMFKIGNSKELPT 55
           MAPEV+K        VD+W  G  +  + +   P+       +EG+      G  K  P 
Sbjct: 200 MAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK----GKYKMNPR 254
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
               +S+  KD +R  L  +P  R T  + L+HP++K        I  PE
Sbjct: 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPE 304

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQ-----YEGVAAMFKIGNSKELPT 55
           +APEV++   G + A DIWSLG  +    T   P++       E + A    G       
Sbjct: 187 VAPEVLERQ-GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245
Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             + +SD  KD +   L  +P  R TA  +L HP++
Sbjct: 246 YWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---AMFKIGNSKELPTIP 57
           +APEV+K   G +   DIWSLG  +  M     P++          + +IG+ K   +  
Sbjct: 192 VAPEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGG 250
Query: 58  D--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           +   +S+  KD +   L  +P  R TA ++L HP+V     L ++ L+ +
Sbjct: 251 NWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQ 300

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---AMFKIGNSKELPTIP 57
           +APEV+K   G +   DIWSLG  +  M     P++          + +IG+ K   +  
Sbjct: 192 VAPEVLKRQ-GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGG 250
Query: 58  D--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           +   +S+  KD +   L  +P  R TA ++L HP+V     L ++ L+ +
Sbjct: 251 NWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQ 300

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPP----------WSQYEGVAA--- 43
           MAPEV++     +S  +   D+WSLG  +  + +  PP          W + E   A   
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 44  MFKIGNSKELPTIPD----DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
           M      +     PD     +S   KD I   L R+   R +A ++L HP+V+G AP E 
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP-EN 306
Query: 100 TILAP 104
           T+  P
Sbjct: 307 TLPTP 311

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 28/117 (23%)
Query: 3   PEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKIGNSKELPTIPDD 59
           P+++  S+  +  +D+W +GC   EMAT +P +   +  E +  +F+I  +    T P  
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 228
Query: 60  LSDE-------------------------GKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           LS+E                         G D +   LQ    NR +A   + HPF 
Sbjct: 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPP----------WSQYEGVAA--- 43
           MAPEV++     +S  +   D+WSLG  +  + +  PP          W + E   A   
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 44  MFKIGNSKELPTIPD----DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
           M      +     PD     +S   KD I   L R+   R +A ++L HP+V+G AP E 
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP-EN 306
Query: 100 TILAP 104
           T+  P
Sbjct: 307 TLPTP 311

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY 38
           MAPEV+     C+  VDIWS  C +L M     PW+QY
Sbjct: 237 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQY 273

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
           APEVI         VD+WS G  +  M   + P+   E +  +FK   S  + T+P  LS
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFK-NISNGVYTLPKFLS 231
Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
                 I+  L  NPLNR +  +++   + K   P    +L P+L
Sbjct: 232 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP--EYLLPPDL 274

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY 38
           MAPEV+     C+  VDIWS  C +L M     PW+QY
Sbjct: 223 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQY 259

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY 38
           MAPEV+     C+  VDIWS  C +L M     PW+QY
Sbjct: 239 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQY 275

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
           APEVI         VD+WS G  +  M   + P+   E +  +FK   S  + T+P  LS
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFK-NISNGVYTLPKFLS 227
Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
                 I+  L  NPLNR +  +++   + K   P    +L P+L
Sbjct: 228 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP--EYLLPPDL 270

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 29/127 (22%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----GN-------- 49
           APE++        AVD+W++GC V EM   +P +     +  ++ I    GN        
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251
Query: 50  --------SKELPTIPD---------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                      LP I +          LS+   D  + CL  +P  RP   +LL H F +
Sbjct: 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
Query: 93  GAAPLER 99
                ER
Sbjct: 312 MDGFAER 318

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 45/137 (32%)
Query: 1   MAPEVIK-NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-----ELP 54
           ++PEV++ N  G +   DI+S+G T  E+A    P+        + +  N       +  
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261
Query: 55  TIPDD--------------LSD-------------------------EGKDFIRLCLQRN 75
           TIP +              LSD                             F+  CLQRN
Sbjct: 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321
Query: 76  PLNRPTAVKLLDHPFVK 92
           P  RP+A  LL+H F K
Sbjct: 322 PDARPSASTLLNHSFFK 338

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 45/137 (32%)
Query: 1   MAPEVIK-NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-----ELP 54
           ++PEV++ N  G +   DI+S+G T  E+A    P+        + +  N       +  
Sbjct: 186 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 245
Query: 55  TIPDD--------------LSD-------------------------EGKDFIRLCLQRN 75
           TIP +              LSD                             F+  CLQRN
Sbjct: 246 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 305
Query: 76  PLNRPTAVKLLDHPFVK 92
           P  RP+A  LL+H F K
Sbjct: 306 PDARPSASTLLNHSFFK 322

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APEV++     +   D+WS G  +  +    PP+        + ++   K     PD  
Sbjct: 190 IAPEVLRKKY--DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT 247
Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
            +SDE K  ++L L   P  R +A + L+HP++
Sbjct: 248 QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 1   MAPEVI---KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA------AMFKIGNSK 51
           +APEV+   K    C    D+WSLG  +  +    PP+    G+A         ++G   
Sbjct: 186 VAPEVLGPEKYDKSC----DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY- 240
Query: 52  ELPTIPD--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT 100
           E P  P+  ++S+E K  IR  L+  P  R T  + ++HP++  +  + +T
Sbjct: 241 EFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 290

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
           APEVI         VD+WS G  +  M   + P+   E +  +FK   S  + T+P  LS
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFK-NISNGVYTLPKFLS 236
Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
                 I+  L  NPLNR +  +++   + K   P
Sbjct: 237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
           APEVI         VD+WS G  +  M   + P+   E +  +FK   S  + T+P  LS
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFK-NISNGVYTLPKFLS 237
Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
                 I+  L  NPLNR +  +++   + K   P
Sbjct: 238 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 272

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 1   MAPEVI---KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA------AMFKIGNSK 51
           +APEV+   K    C    D+WSLG  +  +    PP+    G+A         ++G   
Sbjct: 190 VAPEVLGPEKYDKSC----DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY- 244
Query: 52  ELPTIPD--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT 100
           E P  P+  ++S+E K  IR  L+  P  R T  + ++HP++  +  + +T
Sbjct: 245 EFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 294

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	109
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-57
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-52
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-47
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-42
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-38
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-37
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-37
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-37
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-34
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-33
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-32
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-32
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-32
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-31
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-31
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-31
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-29
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-28
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-28
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-27
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-26
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-26
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-25
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-25
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-20
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-20
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-18
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-18
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-17
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-17
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-17
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-16
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-16
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-16
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-16
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-16
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-16
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-16
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-16
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-16
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-16
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-16
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-16
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-16
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-15
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-15
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-15
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-15
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-14
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-14
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-14
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-14
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-14
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-14
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-14
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-14
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-14
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	6e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-14
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-14
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-14
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-13
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-12
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-12
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	8e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	9e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-11
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-11
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-10
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-10
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-10
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-10
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-10
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-10
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-10
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	9e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-09
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-09
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-09
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	8e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	6e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  177 bits (451), Expect = 3e-57
 Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 4/108 (3%)

Query: 1   MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPD 58
           MAPE+I     G   A DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 106
            +S E K FI  C + +P  R  A  LL   F+K ++  ++    P+L
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK--TQPKL 295

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  164 bits (418), Expect = 6e-52
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-KELPTIPDD 59
           MAPEV+     C+  VDIWS  C +L M     PW+QY       KI +    +  IP  
Sbjct: 223 MAPEVVMGK-PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPS 281

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
            +      I+  L++ P++R +A++L              
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGL 321

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  150 bits (382), Expect = 7e-47
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDD 59
           MAPE+ +     + +VD+++ G  +LEMAT++ P+S+ +  A +++   S   P +    
Sbjct: 197 MAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV 254

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
              E K+ I  C+++N   R +   LL+H F +
Sbjct: 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  139 bits (352), Expect = 2e-42
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +A EV++ +       DI++L  TV+  A  +P     +      +I   + LP IP  L
Sbjct: 197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGR-LPRIPQVL 252

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
           S E  + +++ +  +P  RP+A+ L+ H  +  A+
Sbjct: 253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  128 bits (324), Expect = 6e-38
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE+++       A D++SLG T+LE+A         EG     ++      P     L
Sbjct: 223 MAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGL 277

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           S E +  + + L+ +P  R TA  LL  P ++
Sbjct: 278 SSELRSVLVMMLEPDPKLRATAEALLALPVLR 309

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  128 bits (322), Expect = 4e-37
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 1   MAPEVIKNSSG----------CNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGN 49
           M PE IK+ S            +   D+WSLGC +  M   K P+ Q    ++ +  I +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282

Query: 50  SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
                  PD    + +D ++ CL+R+P  R +  +LL HP+V+        +       +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM 342

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  126 bits (319), Expect = 6e-37
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)

Query: 1   MAPEVIKNSSG----------CNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGN 49
           M PE IK+ S            +   D+WSLGC +  M   K P+ Q    ++ +  I +
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235

Query: 50  SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
                  PD    + +D ++ CL+R+P  R +  +LL HP+V+    
Sbjct: 236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  125 bits (316), Expect = 8e-37
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 11/103 (10%)

Query: 1   MAPEVIKNSS----------GCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGN 49
           M PE IK+ S            +   D+WSLGC +  M   K P+ Q    ++ +  I +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254

Query: 50  SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                  PD    + +D ++ CL+R+P  R +  +LL HP+V+
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  118 bits (298), Expect = 3e-34
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVIK S   +   DIWSLG T +E+A  +PP S+   +  +F I  +   PT+  + 
Sbjct: 186 MAPEVIKQS-AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-PTLEGNY 243

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
           S   K+F+  CL + P  RPTA +LL H F+   A  + + L   + R
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK-KTSYLTELIDR 290

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  115 bits (290), Expect = 5e-33
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 8/106 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--------E 52
           MAPEV++   G +   DIWS G T +E+AT   P+ +Y  +  +     +         +
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252

Query: 53  LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
              +        +  I LCLQ++P  RPTA +LL H F + A   E
Sbjct: 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  113 bits (285), Expect = 2e-32
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEV+         VDIWSLG   +EM   +PP+     + A++ I  +   P +  P+
Sbjct: 183 MAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPELQNPE 240

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
            LS   +DF+  CL+ +   R +A +LL H F+K A PL    L P ++ 
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS--SLTPLIAA 288

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  113 bits (284), Expect = 4e-32
 Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 6/110 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEVI+   G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+
Sbjct: 192 MAPEVIQEI-GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN-PPPTFRKPE 249

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
             SD   DF++ CL ++P  R TA +LL HPFV+ A  +   IL   ++ 
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS--ILRDLINE 297

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  112 bits (283), Expect = 6e-32
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PD 58
           MAPEVI  S      VDIWSLG  V+EM   +PP+     V AM ++ +S   P +    
Sbjct: 208 MAPEVISRS-LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKLKNSH 265

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAP 104
            +S   +DF+   L R+P  R TA +LLDHPF+      E   L P
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE--CLVP 309

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  112 bits (282), Expect = 8e-32
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW-SQYEGVAAMFKIGNSKELPTIPDD 59
           M+PE I  + G N   DIWSLGC + EMA  + P+      + ++ K     + P +P D
Sbjct: 203 MSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261

Query: 60  -LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
             S+E +  + +C+  +P  RP    + D       A    ++      
Sbjct: 262 HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM-HACTASSLEHHHHH 309

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  112 bits (283), Expect = 1e-31
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 1   MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI-P 57
           MAPEVI        +  VD+WSLG T +E+A  KPP      ++A++ I  ++  P +  
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PALQS 275

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
              S+  ++F+  CLQ+ P +RPT+  LL H FV    P    ++   + R
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT--VIMDLIQR 324

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  111 bits (279), Expect = 3e-31
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEVI       +  +   D+WSLG T +EMA   PP      + A+F I  +   P +
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA-PRL 254

Query: 57  -PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
                S + + FI  CL +N   RP   +L+ HPF++         +  +L   
Sbjct: 255 KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNE--RQVRIQLKDH 306

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  110 bits (277), Expect = 3e-31
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
           MAPEV+       +  +   DIWSLG T++EMA  +PP  +   +  + KI  S   PT+
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP-PTL 242

Query: 57  --PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
             P   S E +DF+++ L +NP  RP+A +LL+HPFV          L   ++ 
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS--NKALRELVAE 294

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  105 bits (264), Expect = 5e-29
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 1   MAPEVIKNSSGC---NLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTI 56
           MAPE I  S+     ++  D+WSLG T+ E+AT + P+ ++  V   + ++    + P +
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQL 250

Query: 57  PDDL----SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 94
            +      S    +F+ LCL ++   RP   +LL HPF+   
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  103 bits (260), Expect = 2e-28
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 1   MAPEVIKNSSGC----NLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPT 55
           MAPE I          ++  D+WSLG +++E+AT + P+   +     + K+    E P 
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPL 249

Query: 56  IPDDL--SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
           +P  +  S + + F++ CL ++   RP   KLL+H F+K    LE 
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEV 295

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  102 bits (257), Expect = 3e-28
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 1   MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTI 56
           MAPE I    N  G ++  DIWSLG T++E+A  + P+  +      + ++      P +
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE-PSPQL 234

Query: 57  PDDL-SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
           P D  S E  DF   CL++N   RPT  +L+ HPF     
Sbjct: 235 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  102 bits (257), Expect = 7e-28
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           ++PE+ +N    N   DIW+LGC + E+ T K  +        + KI +    P +    
Sbjct: 192 LSPEICENK-PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHY 249

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           S + +  +    +RNP +RP+   +L+  F+ 
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  102 bits (256), Expect = 1e-27
 Identities = 31/154 (20%), Positives = 46/154 (29%), Gaps = 45/154 (29%)

Query: 1   MAPEVIK-NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI------------ 47
           ++PEV++ N  G +   DI+S+G T  E+A    P+        + +             
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261

Query: 48  --------------------------------GNSKELPTIPDDLSDEGKDFIRLCLQRN 75
                                                        S     F+  CLQRN
Sbjct: 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321

Query: 76  PLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
           P  RP+A  LL+H F K         L   L  +
Sbjct: 322 PDARPSASTLLNHSFFKQIKRRASEALPELLRPV 355

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 98.2 bits (245), Expect = 2e-26
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
           +A EV+  +   N  +D++SLG    EM    P  +  E V  + K+   + +  P   D
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSVSIEFPPDFDD 254

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +     K  IRL +  +P  RP A  LL+  ++ 
Sbjct: 255 NKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP 288

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 99.1 bits (247), Expect = 4e-26
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 1   MAPEVIKNSSGCNL--AVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGN-SKELPTI 56
           +APE++      N    VDI+S GC    + +    P+ +     A   +G  S +    
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
                   ++ I   +  +P  RP+A  +L HPF     
Sbjct: 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLE 291

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 97.0 bits (242), Expect = 5e-26
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE I  +   +  VDI+SLG  + E+    P  +Q E V  +  + N K  P +    
Sbjct: 197 MSPEQIHGN-SYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDVRNLK-FPPLFTQK 252

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
                  ++  L  +P+ RP A+ ++++   +      +T+L
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVL 294

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 93.9 bits (234), Expect = 5e-25
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE I +       VD+++LG  + E+         +E       + +      I D  
Sbjct: 188 MSPEQISSQ-DYGKEVDLYALGLILAELLHVCDT--AFETSKFFTDLRDGI----ISDIF 240

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             + K  ++  L + P +RP   ++L    V   +P
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 93.9 bits (234), Expect = 6e-25
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE +   S  N   DIWSLGC + E+    PP++ +       KI   K    IP   
Sbjct: 183 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRY 240

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           SDE  + I   L     +RP+  ++L++P + 
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLIL 272

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 91.4 bits (227), Expect = 3e-23
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 1   MAPEVIKNSS------GCNLAVDIWSLGCTVLEMATT-KPP-WSQYEGVAAMFK-IGNSK 51
            APE+++ S+          ++DI+S+GC    + +  K P   +Y   + + + I +  
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 258

Query: 52  ELPTIPDD-LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
           E+  + D  L  E  D I   +  +PL RPTA+K+L HP     +
Sbjct: 259 EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKS 303

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 88.8 bits (220), Expect = 1e-22
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE I  +   +  VDI+SLG  + E+       +Q E V  +  +  + + P +    
Sbjct: 243 MSPEQIHGN-NYSHKVDIFSLGLILFELLY--SFSTQMERVRIITDV-RNLKFPLLFTQK 298

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             +    ++  L  +P  RP A  ++++   +
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 82.2 bits (203), Expect = 4e-20
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 43/136 (31%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL------- 53
           M+PE ++ +   ++  DIWS+G +++EMA  + P    +        G   E        
Sbjct: 197 MSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 255

Query: 54  ----------------------------------PTIPDDL-SDEGKDFIRLCLQRNPLN 78
                                             P +P  + S E +DF+  CL +NP  
Sbjct: 256 RPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 315

Query: 79  RPTAVKLLDHPFVKGA 94
           R    +L+ H F+K +
Sbjct: 316 RADLKQLMVHAFIKRS 331

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 81.3 bits (201), Expect = 6e-20
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 1   MAPEVIKNSSGC--NLAVDIWSLGCTVLEMATTKPP--WSQYEGVAAMFKIGNSKELPTI 56
            APE+    S C  +   D+WSLGC +  M   + P      +G +    + N   +P  
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP-Q 268

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLERT 100
               S      +   +  +P  RP    LL     ++  AP + T
Sbjct: 269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHT 313

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 76.3 bits (188), Expect = 8e-18
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 1   MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSK-ELPTI 56
           +APEV+ +    G N AVD WSLG  +    +  PP+S++    ++  +I + K      
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367

Query: 57  P-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
              ++S++  D ++  L  +P  R T  + L HP+++      +
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRK 411

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 75.8 bits (186), Expect = 9e-18
 Identities = 13/112 (11%), Positives = 33/112 (29%), Gaps = 16/112 (14%)

Query: 1   MAPEVIKNSSGC----------NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS 50
             PE+    +              + D W+LG  +  +     P ++   +     I  S
Sbjct: 269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS 328

Query: 51  KELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
                   ++    +  +   L+    +R   ++ ++ P  +         L
Sbjct: 329 ------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAAL 374

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 73.8 bits (182), Expect = 2e-17
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           + PE+I+     +  VD+WSLG    E    KPP+ +       + +I   +   T PD 
Sbjct: 174 LPPEMIEGR-MHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVE--FTFPDF 229

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLERT 100
           +++  +D I   L+ NP  RP   ++L+HP     ++     
Sbjct: 230 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 271

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 73.8 bits (182), Expect = 3e-17
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APEV+    G +  VD+WS+GC +  +   KPP+ +   +   + +I  ++   +IP  +
Sbjct: 183 APEVLSKK-GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNE--YSIPKHI 238

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAP 96
           +      I+  LQ +P  RPT  +LL+   F  G  P
Sbjct: 239 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 74.2 bits (182), Expect = 4e-17
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMF-KIGNSKELPTIP 57
           MAPEV++     + + D +SLGC + ++     P+ Q++      +            +P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELP 414

Query: 58  DDLSDEGKDFIRLCLQRNPLNR-------PTAVKLLDHPFVKG 93
           D  S E +  +   LQR+   R          VK  + PF + 
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK--ESPFFRS 455

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 73.1 bits (180), Expect = 5e-17
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVL-EMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPEV+++    N   D++S G  +L E+AT + PW        +  +G   +   IP +
Sbjct: 206 MAPEVLRDEP-SNEKSDVYSFG-VILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263

Query: 60  LSDEGKDFIRLCLQRNPLNRPT 81
           L+ +    I  C    P  RP+
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPS 285

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 72.3 bits (178), Expect = 7e-17
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 1   MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           +APE ++         + D+WS    + E+ T + P++    +    K+      PTIP 
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234

Query: 59  DLSDEGKDFIRLCLQRNPLNRPT 81
            +S      +++C+  +P  RP 
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPK 257

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 72.7 bits (179), Expect = 1e-16
 Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 11/113 (9%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPW--SQYEGVAAMF-KIGNSKELPT 55
           MAPE+   +  +G + AVD WSLG T  E+   + P+          +      +    T
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV--VT 238

Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVK-LLDHPFVKG---AAPLERTILAP 104
            P   S E    ++  L+ NP  R + +  + + P++      A  ++ ++  
Sbjct: 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPG 291

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 72.4 bits (177), Expect = 1e-16
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 8/100 (8%)

Query: 1   MAPEVIKNSSGC-NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD- 58
              E +  S+     A++ W LG ++  +     P+              S  +P     
Sbjct: 258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSL 317

Query: 59  ------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                  L D  K  I   L  +   R   ++ ++ P   
Sbjct: 318 AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           +PE+    S   L  D+WSLGC    +   +PP+   + V     K+  +     +P  L
Sbjct: 180 SPEIA-TRSAHGLESDVWSLGCMFYTLLIGRPPF-DTDTVKNTLNKVVLADY--EMPSFL 235

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAP 96
           S E KD I   L+RNP +R +   +LDHP   + ++ 
Sbjct: 236 SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSST 272

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APEV+    G +  VD+WS+GC +  +   KPP+ +   +   + +I  ++   +IP  +
Sbjct: 209 APEVLSKK-GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNE--YSIPKHI 264

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAP 96
           +      I+  LQ +P  RPT  +LL+   F  G  P
Sbjct: 265 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQY-EGVAAMF-KIGNSK-ELPTI 56
           +APEV++   G + A DIWSLG  +  M T   P  +   +    +  +IG+ K  L   
Sbjct: 187 VAPEVLERQ-GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245

Query: 57  P-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
             + +SD  KD +   L  +P  R TA  +L HP++     L +  L  + + 
Sbjct: 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           +APEV+  +       D+WS G  +  + +  PP     E    +  K+   K       
Sbjct: 195 IAPEVLHGTYD--EKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEKGKYTFELPQ 250

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
              +S+  KD IR  L   P  R +A   LDH +++     + ++  P L   
Sbjct: 251 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNA 303

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           +APEV+K         D+WS G  +  +    PP     +    +  K+   K       
Sbjct: 215 IAPEVLKKKYNE--KCDVWSCGVIMYILLCGYPPFGG--QNDQDIIKKVEKGKYYFDFND 270

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP----LERTILAPELSRL 109
             ++SDE K+ I+L L  +   R TA + L+  ++K  A      ++  L   LS +
Sbjct: 271 WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNM 327

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           +APEV+      + AVD WS+G     +    PP +   E  + +F KI     E  +  
Sbjct: 174 VAPEVLAQK-PYSKAVDCWSIGVITYILLCGYPPFYE--ETESKLFEKIKEGYYEFESPF 230

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
            DD+S+  KDFI   L+++P  R T  K L HP++ G   L R I      ++
Sbjct: 231 WDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQI 283

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 71.3 bits (175), Expect = 3e-16
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 1   MAPEVIKNSSGC--NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
             PE+I   S        DIW+LGC +  +   + P   +E   A  +I N K      D
Sbjct: 217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP---FED-GAKLRIVNGKYSIPPHD 272

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF-VKGAAPLERTILAPELS 107
                    IR  LQ NP  R +  +++     +  A  +       EL 
Sbjct: 273 TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELL 322

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 70.7 bits (174), Expect = 3e-16
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           MAPEV K         DIWS G  +  + T   P          +  K    +       
Sbjct: 193 MAPEVFKRDVT--FKCDIWSAGVVMYFLLTGCLPFTGTSL--EEVQQKATYKEPNYAVEC 248

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 94
             L+ +  D ++  L ++P  RP+A ++L H + K A
Sbjct: 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 70.0 bits (172), Expect = 5e-16
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPEVI+ S   +   D+WS G  + E+ T + P+   +G+A  + +  +K    IP   
Sbjct: 181 MAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239

Query: 61  SDEGKDFIRLCLQRNPLNRPT 81
            +     +  C   +P +RP+
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPS 260

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 70.8 bits (174), Expect = 5e-16
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 25/122 (20%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMFKIGN--- 49
           MAPEV+K        VD+W  G                  P +   E +      G    
Sbjct: 200 MAPEVVKRE-PYGKPVDVWGCGVILFILLSGC-------LPFYGTKERLFEGIIKGKYKM 251

Query: 50  -SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE-LS 107
             ++   I    S+  KD +R  L  +P  R T  + L+HP++K        I  PE + 
Sbjct: 252 NPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 307

Query: 108 RL 109
           +L
Sbjct: 308 QL 309

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 70.9 bits (174), Expect = 7e-16
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYE-GVAAMFKIGN----SKELP 54
           +APEV++         D+WS+G  +  +    PP   Q +  +    + G     S E  
Sbjct: 205 IAPEVLRKKYD--EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK 262

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
            +    S+  KD I+  LQ +   R +A + L+HP++K   
Sbjct: 263 NV----SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 70.0 bits (172), Expect = 7e-16
 Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 23/130 (17%)

Query: 1   MAPEVIKNSSGC----NLAVDIWSLG-------C-------TVLEMATTKPPWSQYEGVA 42
           MAPEV++  S      +   D+WSLG                           +      
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247

Query: 43  AMF-KIGNSK-ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
            +F  I   K E P      +S   KD I   L R+   R +A ++L HP+V+G AP E 
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP-EN 306

Query: 100 TILAPE-LSR 108
           T+  P  L R
Sbjct: 307 TLPTPMVLQR 316

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 10/111 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAA-----MF-KIGNSK-E 52
            APE++  + G + + D+WSLG  +  M + + P  S    +       +  KI      
Sbjct: 176 AAPELLNQN-GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS 234

Query: 53  LPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
                  ++S E KD I+  L  +P  R     L  + +++  + L    L
Sbjct: 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 70.2 bits (172), Expect = 9e-16
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 1   MAPEVIKNSSGC-NLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTI 56
           +APEV+  ++       D WS G  +  +     P     +  A    ++ N K      
Sbjct: 241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND--ADTISQVLNKKLCFENP 298

Query: 57  P-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
             + LS   +D +   L RN   R  A++ L HP++ 
Sbjct: 299 NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 70.5 bits (173), Expect = 9e-16
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQ-YEGVAAMFKIGN----SKELP 54
           +APEV++ +       D+WS G  +  + +  PP + +    +    + G       +  
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           TI    SD+ KD IR  L  +P  R TA + L+HP+++  + 
Sbjct: 248 TI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 70.2 bits (172), Expect = 1e-15
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELPTIPD 58
           MAPEV+KN      + D W+LGC + EM   + P+ Q +      ++     +      +
Sbjct: 352 MAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410

Query: 59  DLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG 93
             S + +      L ++P  R      +A ++ +HP  K 
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 69.6 bits (171), Expect = 1e-15
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 1   MAPEVIK-NSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMF-KIGNSKELPT 55
           MAP++++   SG + AVD WSLG  + E+ T   P+    +    A +  +I  S+  P 
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE--PP 284

Query: 56  IPDDLSDEGKDFIRLCLQRNPLNR----PTAVK-LLDHPFVKG 93
            P ++S   KD I+  L ++P  R    P     + +H F + 
Sbjct: 285 YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 68.4 bits (168), Expect = 2e-15
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           + PE+I+     +  VD+W  G    E     PP+           +I N       P  
Sbjct: 179 LPPEMIEGK-THDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNVD--LKFPPF 234

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           LSD  KD I   L+ +P  R     +++HP+VK  + 
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 68.5 bits (168), Expect = 3e-15
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 1   MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSK-ELPTI 56
           +APEV+ +    G N AVD WSLG  +    +  PP+S++    ++  +I + K      
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242

Query: 57  P-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              ++S++  D ++  L  +P  R T  + L HP+++    
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 283

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           MAPEV+    G   + D WS G  + EM T   P+   +        I  +K    +P  
Sbjct: 193 MAPEVVNRR-GHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAK--LGMPQF 248

Query: 60  LSDEGKDFIRLCLQRNPLNR----PTAVK-LLDHPFVKG 93
           LS E +  +R+  +RNP NR    P  V+ +  H F   
Sbjct: 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 68.4 bits (168), Expect = 3e-15
 Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           ++PE++        + D+W+LGC + ++    PP+        +F KI   +     P+ 
Sbjct: 199 VSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLE--YDFPEK 254

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLD------HPFVKG 93
              + +D +   L  +   R    ++        HPF + 
Sbjct: 255 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 68.0 bits (167), Expect = 4e-15
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           MAPE++  S G N AVD WSLG  + +M T  PP++  E       KI   K    +P  
Sbjct: 188 MAPEILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILKCK--LNLPPY 243

Query: 60  LSDEGKDFIRLCLQRNPLNR----PTAVK-LLDHPFVKG 93
           L+ E +D ++  L+RN  +R    P     +  HPF + 
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           ++P+V++   G     D WS G  +  +    PP  +  +  + +  KI       P   
Sbjct: 175 VSPQVLEGLYG--PECDEWSAGVMMYVLLCGYPPFSAPTD--SEVMLKIREGTFTFPEKD 230

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             ++S + +  IR  L ++P  R T+++ L+H + +    
Sbjct: 231 WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 67.7 bits (166), Expect = 5e-15
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 18/106 (16%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPPWSQYEGVAAMF-KIGNSK- 51
            APE+++        VD+WS+G       C          P+    G   MF +I N + 
Sbjct: 217 CAPEILR-GCAYGPEVDMWSVGIITYILLCGF-------EPFYDERGDQFMFRRILNCEY 268

Query: 52  ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
              +   D++S   KD +R  +  +P  R T  + L HP+V G A 
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 67.7 bits (166), Expect = 6e-15
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMF-KIGNSK-ELPT 55
           +APEV+      + + D+WSLG  +  +    PP+   +       M  +I   +   P 
Sbjct: 196 VAPEVLG-PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254

Query: 56  IP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
               ++S++ K  IRL L+ +P  R T  + ++HP++  +  + +T L
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 66.9 bits (164), Expect = 7e-15
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 12/104 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYE-GVAAMFKIG----NSKELP 54
           +APEV++ +       D+WS G  +  + +  PP + + E  +    + G    +  +  
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
           TI    SD+ KD IR  L  +P  R TA + L+HP+++  +  E
Sbjct: 248 TI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 67.9 bits (166), Expect = 8e-15
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMF-KIGNSKELPTI 56
           MAPE++      + +VD ++LG T+ EM   + P+    +      +  ++       T 
Sbjct: 356 MAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA--VTY 412

Query: 57  PDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG 93
           PD  S   KDF    LQ++P  R      +   L  HP  + 
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 66.6 bits (163), Expect = 9e-15
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 1   MAPEVIKNSSG-CNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGNSKELPTIP 57
           MAPE I           D +S    +  + T + P+ +Y    +  +  I      PTIP
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP 252

Query: 58  DDLSDEGKDFIRLCLQRNPLNRPT 81
           +D     ++ I LC   +P  RP 
Sbjct: 253 EDCPPRLRNVIELCWSGDPKKRPH 276

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 9/95 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APEV+      +  VD W LG  + EM    PP+      A M+  I N      +  +
Sbjct: 206 LAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYS-RNTAEMYDNILNKP--LQLKPN 261

Query: 60  LSDEGKDFIRLCLQRNPLNR----PTAVKLLDHPF 90
           +++  +  +   LQ++   R       +++  H F
Sbjct: 262 ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 26/123 (21%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYE-GVAAMFKIGN-- 49
           ++PEV++        VD+W+ G                 PP W + +  +    K G   
Sbjct: 180 LSPEVLRKD-PYGKPVDLWACGVILYILLVGY-------PPFWDEDQHRLYQQIKAGAYD 231

Query: 50  --SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE-L 106
             S E  T+    + E KD I   L  NP  R TA + L HP++   + +   +   E +
Sbjct: 232 FPSPEWDTV----TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETV 287

Query: 107 SRL 109
             L
Sbjct: 288 DCL 290

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 26/123 (21%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYE-GVAAMFKIGN-- 49
           ++PEV+K     +  VDIW+ G                 PP W + +  + A  K G   
Sbjct: 197 LSPEVLKKD-PYSKPVDIWACGVILYILLVGY-------PPFWDEDQHRLYAQIKAGAYD 248

Query: 50  --SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE-L 106
             S E  T+    + E K  I   L  NP  R TA + L  P++     +   I   + +
Sbjct: 249 YPSPEWDTV----TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV 304

Query: 107 SRL 109
             L
Sbjct: 305 DCL 307

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 25/114 (21%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYE-GVAAMFKIGN-- 49
           ++PEV+K     +  VDIW+ G                 PP W + +  + A  K G   
Sbjct: 174 LSPEVLKKD-PYSKPVDIWACGVILYILLVGY-------PPFWDEDQHRLYAQIKAGAYD 225

Query: 50  --SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
             S E  T+    + E K  I   L  NP  R TA + L  P++     +   I
Sbjct: 226 YPSPEWDTV----TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAI 275

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE++      N +VD WS G  + EM   + P+   +    +F  I      P  P  
Sbjct: 185 IAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDN--PFYPRW 240

Query: 60  LSDEGKDFIRLCLQRNPLNR---PTAVKLLDHPF 90
           L  E KD +     R P  R      ++   HP 
Sbjct: 241 LEKEAKDLLVKLFVREPEKRLGVRGDIR--QHPL 272

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 25/114 (21%)

Query: 1   MAPEVIKNSSGCN-----LAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMF-K 46
           +APE+I+ S   N       VD+WS G                 PP W + +    M   
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS-------PPFWHRKQ--MLMLRM 240

Query: 47  IGNSK-ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE 98
           I +   +  +   DD SD  KD +   L   P  R TA + L HPF +     E
Sbjct: 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 65.4 bits (160), Expect = 3e-14
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKIGNSKELPTIPDD 59
           MAPEV + S+  +   D++S G  + E+ T + P+ +  G A  +    ++   P +  +
Sbjct: 170 MAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 228

Query: 60  LSDEGKDFIRLCLQRNPLNRPT 81
           L    +  +  C  ++P  RP+
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPS 250

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 17/115 (14%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APEV+ ++   N ++D WS G  + EM     P+         + KI N++     P  
Sbjct: 170 IAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAE--LRFPPF 225

Query: 60  LSDEGKDFIRLCLQRNPLNR-------PTAVKLLDHPFVKG---AAPLERTILAP 104
            +++ KD +   + R+   R          VK  +HP+ K       L R I  P
Sbjct: 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK--NHPWFKEVVWEKLLSRNIETP 278

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 65.1 bits (159), Expect = 5e-14
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 25/108 (23%)

Query: 1   MAPEVIKNSSGC-----NLAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMF-K 46
           +APE++K S           VD+W+ G                 PP W + +    M   
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS-------PPFWHRRQ--ILMLRM 316

Query: 47  IGNSK-ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           I   + +  +   DD S   KD I   LQ +P  R TA + L HPF +
Sbjct: 317 IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 64.8 bits (158), Expect = 6e-14
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 34/123 (27%)

Query: 1   MAPEVIKNSSGC-------NLAVDIWSLGCTVLEMATTKPPWSQYEG----VAAMFKIGN 49
           + P++ + +             VD+WS+G T    AT   P+  +EG       M+KI  
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

Query: 50  SK--------------------ELPT---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLL 86
            K                    ++P    +   L       +   L+ +        +  
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301

Query: 87  DHP 89
              
Sbjct: 302 AET 304

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APEV++++     AVD W LG  + EM   + P+   +    +F  I   +     P  
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILMEE--IRFPRT 227

Query: 60  LSDEGKDFIRLCLQRNPLNR----PT-AVKLLDHPFVKG 93
           LS E K  +   L+++P  R    P+ A ++++H F   
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 64.2 bits (157), Expect = 7e-14
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 22/114 (19%)

Query: 2   APEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYEGV--AAMF-KIGNS 50
           A E          + D+WSLG       C         PP +S +       M  +I   
Sbjct: 167 AKETTGEKYD--KSCDMWSLGVIMYILLCGY-------PPFYSNHGLAISPGMKTRIRMG 217

Query: 51  K-ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
           + E P     ++S+E K  IR  L+  P  R T  + ++HP++  +  + +T L
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 64.6 bits (158), Expect = 7e-14
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE+I +  G N AVD W+LG  + EMA   PP+   +    ++ KI + K     P  
Sbjct: 205 LAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGK--VRFPSH 260

Query: 60  LSDEGKDFIRLCLQRNPLNR-------PTAVKLLDHPFVKG---AAPLERTILAP 104
            S + KD +R  LQ +   R          +K  +H +       A  +R + AP
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK--NHKWFATTDWIAIYQRKVEAP 313

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 64.4 bits (157), Expect = 8e-14
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 19/111 (17%)

Query: 1   MAPEVIKNSSGC-NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSK------- 51
           M PE   N S      VDIWSLG  +  M     P+S    +  +F  I           
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276

Query: 52  ----------ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                     +     + LS+E  DF++L L++NP  R T+   L H ++ 
Sbjct: 277 NHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 64.4 bits (157), Expect = 1e-13
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGV--AAMF-KIGNSK-ELPT 55
           +APEV+      + + D+WSLG  +  +    PP +S +       M  +I   + E P 
Sbjct: 230 VAPEVLGPE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288

Query: 56  IP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
               ++S+E K  IR  L+  P  R T  + ++HP++  +  + +T L
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 63.9 bits (156), Expect = 1e-13
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 1   MAPEVIKNSSG--------CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE 52
           +APE+I+  S          +   D+++LG    E+   + P+      A ++++G   +
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK 260

Query: 53  LPTIPDDLSDEGKDFIRLCLQRNPLNRPT 81
                  +  E  D +  C       RPT
Sbjct: 261 PNLSQIGMGKEISDILLFCWAFEQEERPT 289

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 15/99 (15%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE+++       AVD W++G  + EM     P+   E    +F  I N +     P  
Sbjct: 191 IAPEILQEM-LYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILNDE--VVYPTW 246

Query: 60  LSDEGKDFIRLCLQRNPLNR--------PTAVKLLDHPF 90
           L ++    ++  + +NP  R          A+    HPF
Sbjct: 247 LHEDATGILKSFMTKNPTMRLGSLTQGGEHAIL--RHPF 283

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 63.2 bits (154), Expect = 2e-13
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APEV++++     AVD W LG  + EM   + P+   +    +F  I   +     P  
Sbjct: 316 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILMEE--IRFPRT 371

Query: 60  LSDEGKDFIRLCLQRNPLNR----PT-AVKLLDHPF 90
           L  E K  +   L+++P  R       A +++ H F
Sbjct: 372 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE+I        +VD W+ G  + EM   + P+   E    +F  I         P  
Sbjct: 188 IAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHN--VAYPKS 243

Query: 60  LSDEGKDFIRLCLQRNPLNR----PTAVK-LLDHPF 90
           +S E     +  + ++P  R    P   + + +H F
Sbjct: 244 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 279

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 62.8 bits (152), Expect = 4e-13
 Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI 56
            A  ++     + +    A D W+LG  +  +     P +    +     I   +    I
Sbjct: 279 TAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI--FRSCKNI 336

Query: 57  PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           P  +    +  +   L+    +R   ++ ++ P  +
Sbjct: 337 PQPV----RALLEGFLRYPKEDRLLPLQAMETPEYE 368

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 22/107 (20%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA--------MF-KIGNSK 51
           +APE+++       +VD W+LG  + EM   + P+                +F  I   +
Sbjct: 177 IAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 235

Query: 52  ELPTIPDDLSDEGKDFIRLCLQRNPLNR--------PTAVKLLDHPF 90
               IP  LS +    ++  L ++P  R           ++   HPF
Sbjct: 236 --IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ--GHPF 278

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 62.4 bits (152), Expect = 6e-13
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYE-GVAAMFKIGN----SKELP 54
           +APE++ N     L  D+WS+G     + +   P     +    A     +     +   
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
                 S+  KDFIR  L +    R T  + L HP++      +  +    +  L
Sbjct: 244 QT----SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNL 294

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 61.9 bits (151), Expect = 8e-13
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
           +APE++ N     L  D+WS+G     + +   P     +        I +   +     
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITSVSYDFDEEF 241

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
               S+  KDFIR  L +    R T  + L HP++      +  +    +  L
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNL 294

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 62.0 bits (150), Expect = 8e-13
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           +APE+I        +VD W+ G  + EM   + P+   E    +F  I         P  
Sbjct: 509 IAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHN--VAYPKS 564

Query: 60  LSDEGKDFIRLCLQRNPLNR----PTAVK-LLDHPF 90
           +S E     +  + ++P  R    P   + + +H F
Sbjct: 565 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 600

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 62.0 bits (151), Expect = 8e-13
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 22/107 (20%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA--------MF-KIGNSK 51
           +APE+++       +VD W+LG  + EM   + P+                +F  I   +
Sbjct: 220 IAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 278

Query: 52  ELPTIPDDLSDEGKDFIRLCLQRNPLNR--------PTAVKLLDHPF 90
               IP  LS +    ++  L ++P  R           ++   HPF
Sbjct: 279 --IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ--GHPF 321

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 1   MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKE--- 52
           ++PE+++             D WSLG  + EM   + P+   E +   + KI N KE   
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHKERFQ 301

Query: 53  LPTIPDDLSDEGKDFIRLCLQRNP--LNRPTAVKLLDHPFVKG 93
            PT   D+S+  KD IR  +      L +        HPF  G
Sbjct: 302 FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 1   MAPEVIKNSSG--CNLAVDIWSLGCTVL-EMATTKPPWSQYEGV-AAMFKIGNSK---EL 53
           MAPEVI+       +   D+++ G  VL E+ T + P+S        +  +G      +L
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFG-IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247

Query: 54  PTIPDDLSDEGKDFIRLCLQRNPLNRPT 81
             +  +     K  +  CL++    RP+
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPS 275

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 18/118 (15%)

Query: 1   MAPEVIKNSSGC---NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTI 56
           ++PEV+K+  G        D WS+G  + EM     P+   + +   + KI N K   T 
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTF 294

Query: 57  PD--DLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG---AAPLERTILAP 104
           PD  D+S E K+ I      +   R        +K   H F K    A    R  +AP
Sbjct: 295 PDDNDISKEAKNLICA-FLTDREVRLGRNGVEEIK--RHLFFKNDQWAWETLRDTVAP 349

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 23/122 (18%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMF-KIGNSK 51
           +APE++ N      A D+W++G                  P   +       +  I    
Sbjct: 200 LAPEIL-NYDPITTATDMWNIGIIAYMLLTHT-------SPFVGEDN--QETYLNISQVN 249

Query: 52  -ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK--GAAPLERTILAPELS 107
            +        +S    DFI+  L +NP  RPTA   L H +++      L         S
Sbjct: 250 VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSS 309

Query: 108 RL 109
           + 
Sbjct: 310 QT 311

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 47/150 (31%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP---------PWSQYEGVAAMFKI----- 47
           +PEV+  +       DIWS  C + E+ T                 + +A + ++     
Sbjct: 203 SPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 261

Query: 48  -----------------GNSKE-----LPTIPDDLSDEGK----------DFIRLCLQRN 75
                            G  +         + D L+++ K          DF+   LQ +
Sbjct: 262 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 321

Query: 76  PLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
           P  R  A  L++HP++K    +E   +   
Sbjct: 322 PRKRADAGGLVNHPWLKDTLGMEEIRVPDR 351

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 60.0 bits (146), Expect = 3e-12
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 14/118 (11%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYE-GVAAMFKIGN----SKELP 54
           +APE++       L  D+WS+G     + +   P     +    A     N     +   
Sbjct: 184 VAPEIVNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG---AAPLERTILAPELSRL 109
                 S   KDFIR  L ++P  R T    L HP++K       L R   A  + + 
Sbjct: 243 NT----SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKF 296

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMF-KIGNSK 51
           +APE++ N     L  D+WS+G                  P   + +        I    
Sbjct: 178 VAPEIV-NYEPLGLEADMWSIGVITYILLSGA-------SPFLGETK--QETLTNISAVN 227

Query: 52  -ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA 95
            +       + S+  KDFIR  L ++P  R T  + L+H ++K   
Sbjct: 228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 59.3 bits (144), Expect = 7e-12
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
            APE++ +        D+W++G     + +   P     E        +     E     
Sbjct: 217 AAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCDWEFDEDA 273

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP-LERTILAPELSRL 109
              +S E KDFI+  LQ+ P  R T    L+HP++KG    L   I +   +++
Sbjct: 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKI 327

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 58.8 bits (143), Expect = 8e-12
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 28/120 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           +P ++ + +    A+D+W+ GC   EM T K          Q + +             +
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQE 251

Query: 47  IGNS-----KELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           + +      +   T P          +S E  DF+   L  +P++R TA + L HP++  
Sbjct: 252 LLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 29/118 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---------------------SQYEG 40
           +PE++   +     VD+W++GC   E+ +  P W                        + 
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229

Query: 41  VAAM--------FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            +              + + L     ++S      ++ CL  +P  R T  +LL HP+
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 58.7 bits (142), Expect = 1e-11
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 34/122 (27%)

Query: 1   MAPEVIKNSSGC-------NLAVDIWSLGCTVLEMATTKPPWSQYEG----VAAMFKIGN 49
           + P++ + +             VD+WS+G T    AT   P+  +EG       M+KI  
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

Query: 50  SK--------------------ELPT---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLL 86
            K                    ++P    +   L       +   L+ +        +  
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301

Query: 87  DH 88
             
Sbjct: 302 AE 303

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 35/121 (28%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---------------------SQYEG 40
           APE++        AVD+W++GC V EM   +P +                        E 
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251

Query: 41  VAAM--FKIGNSKELPTIPD---------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
                 F       LP I +          LS+   D  + CL  +P  RP   +LL H 
Sbjct: 252 FNKNPVFA---GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308

Query: 90  F 90
           F
Sbjct: 309 F 309

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 58.3 bits (141), Expect = 2e-11
 Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYE-GVAAMFKIGN----SKELP 54
            APEV           D+WS+G     + +   P   + +       K  +         
Sbjct: 323 AAPEVA-EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 101
            I    S++GKDFIR  L  +P  R T  + L+HP++       R  
Sbjct: 382 GI----SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 19/109 (17%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLG-------CTVLEMATTKPP-WSQYEGVAAMFKIGNSK- 51
           +APEV+ N    +   D+WS+G         +        P     +    +  I   + 
Sbjct: 255 LAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGL-------SPFLGDND-AETLNNILACRW 305

Query: 52  ELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER 99
           +L      D+S+E K+FI   L +    R +A + L HP++       R
Sbjct: 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSR 354

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMF-KIGNSK-ELPTIP 57
            APEV       + A D+WSLG  V  + +   P  ++      +   I N++       
Sbjct: 170 YAPEVH-QHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAEYTFDEEA 226

Query: 58  -DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
             ++S E  DF+   L +   +R TA + L HP++K    
Sbjct: 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 57.0 bits (138), Expect = 4e-11
 Identities = 34/140 (24%), Positives = 44/140 (31%), Gaps = 43/140 (30%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW---SQYEGVAAMFKI----------- 47
            PEVI    G     D+WS+GC + E       +      E +  M KI           
Sbjct: 207 PPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHR 265

Query: 48  -------------------------GNSKELPTI--PDDLSDEG-KDFIRLCLQRNPLNR 79
                                     N K L +    D L      D +R  L+ +P  R
Sbjct: 266 TRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325

Query: 80  PTAVKLLDHPFVKGAAPLER 99
            T  + L HPF  G  P ER
Sbjct: 326 ITLAEALLHPFFAGLTPEER 345

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 56.5 bits (137), Expect = 5e-11
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
            PE I       L   +WSLG  + +M     P+ + +      +I  ++     P  +S
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAE--LHFPAHVS 257

Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLE 98
            +    IR CL   P +RP+  ++L  P     A  + 
Sbjct: 258 PDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 56.6 bits (137), Expect = 5e-11
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 19/108 (17%)

Query: 1   MAPEVIKNSSGC------NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKE- 52
           ++PE+++   G           D W+LG    EM   + P+   +  A  + KI + KE 
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA-DSTAETYGKIVHYKEH 288

Query: 53  --LPTIPDDLSDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG 93
             LP + + + +E +DFI+  L   P  R         +   HPF  G
Sbjct: 289 LSLPLVDEGVPEEARDFIQR-LLCPPETRLGRGGAGDFR--THPFFFG 333

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 56.5 bits (137), Expect = 6e-11
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 38/126 (30%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------PWSQYEGV 41
           APEV+  S+  + A+D+WS GC + E+   +P                    P S     
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD---- 245

Query: 42  AAMFKIGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
             +  I + +       LP  P          ++ +G D ++  L  +P  R TA + L+
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305

Query: 88  HPFVKG 93
           HP+++ 
Sbjct: 306 HPYLQT 311

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 56.2 bits (136), Expect = 7e-11
 Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APE+ +        VD+WSLG  +  + +   P+   + +  +  ++   K    IP  +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGK--YRIPFYM 237

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           S + ++ ++  L  NP+ R T  +++   ++     
Sbjct: 238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 56.2 bits (136), Expect = 7e-11
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
            PE I+       +  +WSLG  + +M     P+   E      +I   +        +S
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQ--VFFRQRVS 267

Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLE 98
            E +  IR CL   P +RPT  ++ +HP       P E
Sbjct: 268 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 305

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 56.3 bits (136), Expect = 7e-11
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
           APEV+  +      +++WSLG T+  +   + P+ + E      +   +      P  +S
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------ETVEAA--IHPPYLVS 248

Query: 62  DEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 97
            E    +   LQ  P  R T  KL+  P+V     L
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNL 284

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 1   MAPEVIKNS----SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPT 55
           MAPE +  +    SG   A+D+W++G T+      + P+   E +  +  KI    +   
Sbjct: 204 MAPESLSETRKIFSG--KALDVWAMGVTLYCFVFGQCPFMD-ERIMCLHSKI--KSQALE 258

Query: 56  IPD--DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            PD  D++++ KD I   L +NP +R    ++  HP+V 
Sbjct: 259 FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 2   APEVIKNSSGCN-LAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
            PE+       +   VDIWS G T+  + T   P+ + + +  +F  IG       IP D
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKGS--YAIPGD 235

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLERTILAPEL 106
                 D ++  L+  P  R +  ++  H  F K   P E  +  P  
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPS 283

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 29/121 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           APEVI +    N  VDIWS+GC + EM T K          Q   +           + K
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250

Query: 47  IGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           + +         LP  P           S +  D +   L+ +   R TA + L HPF +
Sbjct: 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

Query: 93  G 93
            
Sbjct: 311 P 311

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 55.3 bits (133), Expect = 2e-10
 Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 47/135 (34%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---------VAAMFKI----- 47
           + EV+  S G N   DIWS  C   E+AT    +  + G         +A + ++     
Sbjct: 261 SLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 319

Query: 48  -----------------GNSKELPTIPD-----------DLSDEGK----DFIRLCLQRN 75
                            G+ K +  +             + S E      DF+   L+  
Sbjct: 320 RKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI 379

Query: 76  PLNRPTAVKLLDHPF 90
           P  R TA + L HP+
Sbjct: 380 PEKRATAAECLRHPW 394

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 29/120 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           APE++ N    N  VDIWS+GC + E+ T +          Q + +           + K
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256

Query: 47  IGNS------KELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           I +       + L  +P           +    D +   L  +   R TA + L H +  
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDD 59
           MAPE+I   S  +  VD++S G  + E+         Y      F +     L    P +
Sbjct: 189 MAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN 247

Query: 60  LSDEGKDFIRLCLQRNPLNRPT 81
                      C   +P  RP+
Sbjct: 248 CPPSFFPITVRCCDLDPEKRPS 269

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           APE++ NS G   ++DIWS+GC + EM + +P         Q   +           +  
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258

Query: 47  IGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           I N K       LP            +   +  D +   L  NP  R    + L HP+++
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

Query: 93  G 93
            
Sbjct: 319 Q 319

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----G--------- 48
           APE+I  ++     +DIWS GC + E+   +P +    G+  + +I    G         
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268

Query: 49  -----NSKELPTIP---------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                   + P I               +  D I   L+  P  R TA++ L HPF
Sbjct: 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APEVI         VD+WS G  +  M   + P+   E +  +F K+ +      +PD L
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVNSCV--YVMPDFL 231

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP 96
           S   +  IR  +  +P+ R T  ++   P+     P
Sbjct: 232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI----G--------- 48
           APE+I  ++    ++D+WS GC + E+   +P +    GV  + +I    G         
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283

Query: 49  -NSK----ELPTIP---------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            N      + P I               E        L+  P  R T ++   H F
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 29/121 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           APEVI N       VDIWS+GC + EM T K          Q + +           + +
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252

Query: 47  IGNSK------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           + + +       LP +          + S    + +   L  +   R TA + L HP+ +
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

Query: 93  G 93
            
Sbjct: 313 S 313

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 27/116 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----W-- 35
           AP+V+  S   +  +DIWS+GC   EM    P                    P    W  
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 36  -SQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            ++       F +       +    L + G D +   L+ +P  R TA + L+H +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 31/137 (22%), Positives = 45/137 (32%), Gaps = 49/137 (35%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK---PPWSQYEGVAAMFKI----------- 47
           APEVI N  G +++ D+WS GC + E+ T           E +A M  I           
Sbjct: 227 APEVILNL-GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYE 285

Query: 48  --------------------------------GNSKELPTIPDDLSDEGKDFIRLCLQRN 75
                                                L  I     +   DF+   LQ +
Sbjct: 286 ATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH--ELFCDFLYSILQID 343

Query: 76  PLNRPTAVKLLDHPFVK 92
           P  RP+  +LL H F++
Sbjct: 344 PTLRPSPAELLKHKFLE 360

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----W-- 35
            PE++  S   + +VDIWS+ C   EM    P                    P    W  
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264

Query: 36  -SQYEGVAAMFKIGNSKELPTI-PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
            +        F     K L  +    L DEG D +   L+ +P+ R +A   L+HP+
Sbjct: 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 27/121 (22%), Positives = 38/121 (31%), Gaps = 30/121 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--PWSQY----------------EGVAA 43
           APE+I  +     AVDIWS+GC   EM   +P                       E +  
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258

Query: 44  M------FKIGN------SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           +        + N      S          + E  D +   LQ  P  R    + L HP+ 
Sbjct: 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

Query: 92  K 92
            
Sbjct: 319 D 319

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 54.3 bits (131), Expect = 4e-10
 Identities = 31/139 (22%), Positives = 44/139 (31%), Gaps = 49/139 (35%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP---------------------------- 33
           APE++  S+     +D+WSLGC + E+   KP                            
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVES 257

Query: 34  -------------------PWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQR 74
                                S    +   +K    K  P    D ++E  D +   LQ 
Sbjct: 258 IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPK--ADCNEEALDLLDKLLQF 315

Query: 75  NPLNRPTAVKLLDHPFVKG 93
           NP  R +A   L HPFV  
Sbjct: 316 NPNKRISANDALKHPFVSI 334

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 25/122 (20%), Positives = 40/122 (32%), Gaps = 30/122 (24%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP------PWSQYEGV---------AAMFK 46
           APE++    G    VD+WS GC + EM   K        ++Q   +           +  
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260

Query: 47  IGNSK-------ELPTIPD--------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
             +          L  +P                D I   L+ NP  R +  + L HP+ 
Sbjct: 261 FSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

Query: 92  KG 93
           + 
Sbjct: 321 ES 322

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 53.8 bits (130), Expect = 6e-10
 Identities = 32/134 (23%), Positives = 44/134 (32%), Gaps = 43/134 (32%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTK---PPWSQYEGVAAMFKI-G--------- 48
           APEVI    G +   D+WS+GC ++E        P     E +A M +I G         
Sbjct: 202 APEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQK 260

Query: 49  --------------------------NSKELPTI--PDDLSDEG-KDFIRLCLQRNPLNR 79
                                       K L       D+  E   D I+  L+ +P  R
Sbjct: 261 TRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320

Query: 80  PTAVKLLDHPFVKG 93
            T  + L HPF   
Sbjct: 321 ITLREALKHPFFDL 334

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 53.2 bits (128), Expect = 9e-10
 Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 27/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--PWSQY----------------EGVAA 43
           APE++  ++    ++D+WS+GC   E+   KP                       E +  
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR 268

Query: 44  MFKIGNSKELPTI---------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           M         PT+         P+       D +   L+  P  R    + + HPF 
Sbjct: 269 MNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 23/114 (20%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
           +APE+++      + VD WS G    E  T   P+               K    I    
Sbjct: 190 LAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248

Query: 59  --------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                L+ + + +++  L  +   R T  +  +    +
Sbjct: 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 32/121 (26%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----W-- 35
           AP+V+  S   + ++DIWS GC + EM T KP                    P    W  
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235

Query: 36  -SQYEGVAAMFKIGNSKELPTI-----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP 89
            ++        +    ++L  +      + L     DF+   LQ NP  R +A + L HP
Sbjct: 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295

Query: 90  F 90
           +
Sbjct: 296 W 296

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APEVI         VDIWS G  +  +     P+   + V  +F KI +       P  L
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGI--FYTPQYL 239

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +      ++  LQ +P+ R T   + +H + K
Sbjct: 240 NPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDDL 60
           APEVI         VDIWS G  +  +     P+   E V  +F KI        IP+ L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-DDEHVPTLFKKIRGGV--FYIPEYL 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +      +   LQ +PL R T   + +H + K
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.9 bits (124), Expect = 3e-09
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 7/92 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
              E++ N    N  +D + +  TV  M        + EG     +         +P   
Sbjct: 252 QCVEMLSNK-PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE----GLFRRLPH-- 304

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            D   +F  + L     +   ++ LL     K
Sbjct: 305 LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 28/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----W-- 35
           AP+V+  S   + +VDIWS+GC   EM T KP                    P    W  
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246

Query: 36  -SQYEGVAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             +        F++   K   +I      EG D +   L  +P  R +A   ++HP+
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 28/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-------------------------W- 35
            P+V+  +   + ++D+WS GC   E+A    P                         W 
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 36  --SQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             ++            +  L  +   L+  G+D ++  L+ NP+ R +A + L HP+
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----W-- 35
            P+++  S+  +  +D+W +GC   EMAT +P                    P    W  
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227

Query: 36  -SQYEGVAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
               E      +    ++ L +    L  +G D +   LQ    NR +A   + HPF
Sbjct: 228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 50.3 bits (121), Expect = 8e-09
 Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 5/105 (4%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-DDL 60
           APE++K        VD+WS G  +  M   + PW Q       +     K+    P   +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHP-FVKGAAPLERTILAP 104
                  +   L  NP  R T   +     + K    L++    P
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKP---LKKGAKRP 276

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 50.5 bits (121), Expect = 8e-09
 Identities = 22/132 (16%), Positives = 34/132 (25%), Gaps = 41/132 (31%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP---------------------------- 33
           APEVI         VDIWS+GC + EM                                 
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252

Query: 34  ------------PWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT 81
                       P         +F               + + +D +   L  +   R +
Sbjct: 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312

Query: 82  AVKLLDHPFVKG 93
             + L HP++  
Sbjct: 313 VDEALQHPYINV 324

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 49.5 bits (118), Expect = 2e-08
 Identities = 25/132 (18%), Positives = 36/132 (27%), Gaps = 41/132 (31%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP---------------------------- 33
           APEVI    G    VDIWS+GC + EM   K                             
Sbjct: 231 APEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289

Query: 34  ------------PWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPT 81
                       P         +F               + + +D +   L  +P  R +
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349

Query: 82  AVKLLDHPFVKG 93
               L HP++  
Sbjct: 350 VDDALQHPYINV 361

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 3/107 (2%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP-DDL 60
           APE++K        VD+WS G  +  M   + PW Q       +     K+    P   +
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
                  +   L  NP  R T   +    +     PL++    P ++
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYN--KPLKKGAKRPRVT 279

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 36/125 (28%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFKIGNSKELPTIP 57
            PE++ +    + ++D+WSLGC +  M   K P+      Y+ +  + K+  +++L    
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257

Query: 58  D--------------------------------DLSDEGKDFIRLCLQRNPLNRPTAVKL 85
           D                                 +S E  DF+   L+ +  +R TA + 
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317

Query: 86  LDHPF 90
           ++HP+
Sbjct: 318 MEHPY 322

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 27/108 (25%)

Query: 1   MAPEVIKNS-----SGCNLAVDIWSLGCTVL-EMAT----------TKPPWSQYEGVAAM 44
           MAPEV+  +           VDIW+ G  VL E+A            KPP+         
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFG-LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS 242

Query: 45  FK-----IGNSKELPTIPDDLSDEG-----KDFIRLCLQRNPLNRPTA 82
           F+     +   ++ P IP+    +         ++ C  +NP  R TA
Sbjct: 243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 27/149 (18%), Positives = 43/149 (28%), Gaps = 57/149 (38%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEM-ATTKPPWSQYEGVAAMF--------------- 45
           APE+I        ++DIWS GC   E+    +   +       +F               
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278

Query: 46  ---------------------------KIGNSK------ELPTIP--------DDLSDEG 64
                                       I   +        P             +SD+G
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338

Query: 65  KDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
            + +   L+ NP  R T  + LDHP++K 
Sbjct: 339 INLLESMLKFNPNKRITIDQALDHPYLKD 367

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 31/104 (29%)

Query: 15  AVDIWSLGCTVLEMATTKP--------------------P----WSQYEGVAAM----FK 46
            VD+WS+GC   EM   KP                    P    W       ++    F 
Sbjct: 199 PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP---RDVSLPRGAFP 255

Query: 47  IGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
               + + ++  ++ + G   +   L  NP  R +A + L H +
Sbjct: 256 PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 32/118 (27%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P----WSQ 37
           APE++  +    + VD+W++GC + E+    P                    P    W  
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP- 238

Query: 38  YEGVAAM-----FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
              + ++     FK      L  I     D+  D I+     NP  R TA + L   +
Sbjct: 239 --DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 25/107 (23%)

Query: 1   MAPEV----IKNSSGCNLAVDIWSLGCTVLEMATTKPPWS---------------QYEGV 41
           MAPEV    I       L +D++++G  + E+A+                     Q+  +
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259

Query: 42  AAMFKIGNSKEL-PTIPDD-LSDEG----KDFIRLCLQRNPLNRPTA 82
             M ++   K+  P + D      G     + I  C   +   R +A
Sbjct: 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 31/104 (29%)

Query: 15  AVDIWSLGCTVLEMATTKP--------------------P----WSQYEGVAAM----FK 46
            VD+WS+GC   EM   KP                    P    W       A+    F 
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP---RDVALPRQAFH 255

Query: 47  IGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
             +++ +     D+ + GKD +  CL  NP  R +A   L HP+
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 45.0 bits (107), Expect = 6e-07
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---TIPD 58
           APEV+          D+WS G T+  M     P+ +       ++    + L    +IPD
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF-EDPEEPRDYRKTIQRILSVKYSIPD 243

Query: 59  D--LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
           D  +S E    I      +P  R +  ++  H +     P +    +   S
Sbjct: 244 DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGS 294

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.1 bits (107), Expect = 7e-07
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 27/108 (25%)

Query: 1   MAPEVIKNSSGCN-----LAVDIWSLGCTVL-EMAT----------TKPPWSQYEGVAAM 44
           M PEV+  S   N     +  D++S G  +L E+A            + P+         
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGL-ILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271

Query: 45  FK-----IGNSKELPTIPDDLSDEG-----KDFIRLCLQRNPLNRPTA 82
           ++     +   K  P+ P+  S +         +  C   NP +R TA
Sbjct: 272 YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA 319

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 32/152 (21%), Positives = 47/152 (30%), Gaps = 60/152 (39%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATT-----------KP--PWSQYEGVAAMFKIG 48
           APE+I        A+D+WS+GC   E+               P  P S    ++   K G
Sbjct: 251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAG 310

Query: 49  NSKELPTI-----------------PDDL----SDEGKDFIRL----------------- 70
           N  +  T                   +D+     ++ K +IR+                 
Sbjct: 311 NDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS 370

Query: 71  ---------CLQRNPLNRPTAVKLLDHPFVKG 93
                     L  NP  R T  + L HPF K 
Sbjct: 371 ADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 49  NSKELPTIPDDLSDEG-KDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELS 107
            S+E         D    DF++ CL+ +P  R T  + L HP+++   P   T     + 
Sbjct: 369 ESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTSVK 428

Query: 108 R 108
           R
Sbjct: 429 R 429

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           APEVI  +    + +D+WSLGC + E+ T  P
Sbjct: 267 APEVILGA-RYGMPIDMWSLGCILAELLTGYP 297

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 22/107 (20%), Positives = 33/107 (30%), Gaps = 25/107 (23%)

Query: 1   MAPEVIKNSSGC-----NLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK--------- 46
           MAPEV+ +S            DI+++G    E+A        +E     +          
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277

Query: 47  ------IGNSKELPTIPDDLSDEG-----KDFIRLCLQRNPLNRPTA 82
                 +   K  P IP+              +R C   N   R TA
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 324

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 45/134 (33%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP---------PWSQYEGVAAMFKI----- 47
           APE++  +     A+DIW++GC   E+ T++P           S       + +I     
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262

Query: 48  -------------------------------GNSKELPTIPDDLSDEGKDFIRLCLQRNP 76
                                             K +         +    ++  L  +P
Sbjct: 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDP 322

Query: 77  LNRPTAVKLLDHPF 90
           + R T+ + +  P+
Sbjct: 323 IKRITSEQAMQDPY 336

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 21/119 (17%), Positives = 33/119 (27%), Gaps = 30/119 (25%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP--------------------P------- 34
            PE++         +D+W  GC + EM T  P                            
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255

Query: 35  WSQYEGVAAM-FKIGNSKELPTIPDDL--SDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
              YE    +    G  +++              D I   L  +P  R  +   L+H F
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 30/112 (26%)

Query: 1   MAPEVIKNS------SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM---------- 44
           MAPEV++ +            VD+++LG    E+          E V             
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN 254

Query: 45  --------FKIGNSKELPTIPDDLSDEG------KDFIRLCLQRNPLNRPTA 82
                     +   K+ P  P+   +        K+ I  C  ++   R TA
Sbjct: 255 HPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKP 33
           +PEV+      +LA+D+WSLGC ++EM T +P
Sbjct: 226 SPEVLLGM-PYDLAIDMWSLGCILVEMHTGEP 256

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 20/82 (24%), Positives = 25/82 (30%), Gaps = 4/82 (4%)

Query: 19  WSLGCTVLEMATTKPPWSQYE----GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQR 74
           W+L  T       KPP ++      GV      G              + KD I   L  
Sbjct: 300 WNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDY 359

Query: 75  NPLNRPTAVKLLDHPFVKGAAP 96
           +P  R      L H F K  A 
Sbjct: 360 DPKTRIQPYYALQHSFFKKTAD 381

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNSKELPTIP 57
            +PE  K  +  +   DI+S+G  + EM   +PP   + G   V+   K      +P + 
Sbjct: 179 FSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPP---FNGETAVSIAIKHIQD-SVPNVT 233

Query: 58  ----DDLSDEGKDFIRLCLQRNPLNRP-TAVKLLD 87
                D+     + I    +++  NR  T  ++ D
Sbjct: 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGN------SKE 52
           MAPE    S       DI++L C + E  T  PP   Y+G  ++ M    N      S  
Sbjct: 202 MAPERFSESH-ATYRADIYALTCVLYECLTGSPP---YQGDQLSVMGAHINQAIPRPSTV 257

Query: 53  LPTIPDDLSDEGKDFIRLCLQRNPLNR-PTAVKLLD 87
            P IP          I   + +NP +R  T   L  
Sbjct: 258 RPGIPVAFD----AVIARGMAKNPEDRYVTCGDLSA 289

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
            APE+++  +G  +A DI+++G T+  +    P      G   +  +     +    D  
Sbjct: 244 QAPEIVR--TGPTVATDIYTVGRTLAALTLDLPT---RNGR-YVDGLPEDDPVLKTYDSY 297

Query: 61  SDEGKDFIRLCLQRNPLNRP 80
                  +R  +  +P  R 
Sbjct: 298 G----RLLRRAIDPDPRQRF 313

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           + PE I+N    NLA D WS G T+ E+ +    P S  +    +    +  +LP  P  
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA-PKA 242

Query: 60  LSDEGKDFIRLCLQRNPLNRPT 81
              E  + I  C+   P +RP+
Sbjct: 243 --AELANLINNCMDYEPDHRPS 262

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 36.1 bits (84), Expect = 9e-04
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 18/97 (18%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFK------IGNSK 51
           ++PE  +  S  +   D++SLGC + E+ T +PP   + G   V+  ++      I  S 
Sbjct: 186 LSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP---FTGDSPVSVAYQHVREDPIPPSA 241

Query: 52  ELPTIPDDLSDEGKDFIRLCLQRNPLNRP-TAVKLLD 87
               +  DL       +   L +NP NR  TA ++  
Sbjct: 242 RHEGLSADL----DAVVLKALAKNPENRYQTAAEMRA 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	109
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.93
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.9
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.89
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.88
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.87
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.87
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.86
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.86
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.85
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.85
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.85
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.85
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.85
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.85
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.85
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.85
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.85
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.84
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.84
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.84
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.84
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.84
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.83
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.83
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.83
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.83
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.83
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.83
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.83
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.83
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.83
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.83
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.83
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.83
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.83
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.83
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.83
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.83
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.83
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.83
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.83
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.82
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.82
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.82
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.82
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.82
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.82
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.82
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.82
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.82
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.82
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.82
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.82
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.82
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.81
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.81
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.81
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.81
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.81
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.81
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.81
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.81
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.81
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.81
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.81
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.81
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.81
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.81
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.81
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.81
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.81
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.81
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.81
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.81
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.8
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.8
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.8
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.8
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.8
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.8
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.8
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.8
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.8
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.8
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.8
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.8
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.79
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.79
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.79
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.79
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.79
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.79
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.79
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.79
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.79
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.78
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.78
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.78
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.78
3bhy_A	283	Death-associated protein kinase 3; death associate	99.78
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.77
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.77
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.76
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.76
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.76
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.76
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.76
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.75
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.75
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.75
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.74
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.74
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.73
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.73
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.73
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.73
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.73
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.72
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.72
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.72
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.72
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.72
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.72
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.72
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.71
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.71
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.71
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.71
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.71
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.71
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.71
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.71
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.71
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.71
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.71
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.7
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.7
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.7
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.7
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.7
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.7
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.7
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.7
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.7
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.69
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.69
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.69
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.69
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.69
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.68
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.68
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.68
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.68
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.68
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.68
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.68
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.67
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.67
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.67
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.67
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.67
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.67
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.66
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.66
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.66
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.66
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.66
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.66
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.65
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.65
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.64
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.64
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.64
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.63
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.62
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.62
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.62
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.61
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.6
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.6
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.6
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.59
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.59
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.59
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.57
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.57
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.55
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.54
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.54
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.46
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.42
3uqc_A	286	Probable conserved transmembrane protein; structur	99.42
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.32
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.25
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.17
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.8

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=2.9e-26  Score=137.35  Aligned_cols=92  Identities=30%  Similarity=0.489  Sum_probs=78.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+.......+.....  ..|...++++.+|+.+||..+|++|+
T Consensus       193 mAPE~~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          193 MAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             CCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             CCHHHhccCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcccCHHHCC
Confidence            7999997665 89999999999999999999999988776666555544432  45778899999999999999999999


Q ss_pred             c-----HHHHhcCcccCCCC
Q 033880           81 T-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~~   95 (109)
                      +     ++|+++||||++..
T Consensus       270 ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          270 GAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             TCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCcCCHHHHHcCccccCCC
Confidence            8     57999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=1.7e-26  Score=136.69  Aligned_cols=92  Identities=28%  Similarity=0.378  Sum_probs=77.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+..+++.++|+||+||++|+|++|..||.+.+.......+....  ...+...++++++|+.+||..+|++|+
T Consensus       178 ~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~R~  255 (275)
T 3hyh_A          178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCChhHCc
Confidence            799999876656789999999999999999999998766555544444433  245677899999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      +++|+++||||+..
T Consensus       256 s~~eil~hpw~k~~  269 (275)
T 3hyh_A          256 SIHEIMQDDWFKVD  269 (275)
T ss_dssp             CHHHHHHCHHHHTT
T ss_pred             CHHHHHcCcccccC
Confidence            99999999999754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=1e-25  Score=136.86  Aligned_cols=96  Identities=38%  Similarity=0.542  Sum_probs=78.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+....+..+..... ....+..++.++++|+.+||..||++|
T Consensus       237 mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  315 (346)
T 4fih_A          237 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR  315 (346)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence            7999986655 89999999999999999999999988766665554433322 122345678999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCc
Q 033880           80 PTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~   97 (109)
                      ++++|+++||||+...+.
T Consensus       316 ~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          316 ATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             CCHHHHTTCGGGGGCCCG
T ss_pred             cCHHHHhcCHhhcCCCCC
Confidence            999999999999876543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=5.5e-26  Score=136.35  Aligned_cols=93  Identities=22%  Similarity=0.433  Sum_probs=79.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+....+..+.....  .++...+.++++|+.+||..||++|+
T Consensus       201 mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~--~~p~~~s~~~~dli~~lL~~dp~~R~  277 (311)
T 4aw0_A          201 VSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY--DFPEKFFPKARDLVEKLLVLDATKRL  277 (311)
T ss_dssp             CCHHHHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTCCHHHHHHHHHHSCSSGGGST
T ss_pred             CCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCcccCHHHHHHHHHHccCCHhHCc
Confidence            7999997765 89999999999999999999999988766666555554433  45778899999999999999999999


Q ss_pred             cHHH------HhcCcccCCCCC
Q 033880           81 TAVK------LLDHPFVKGAAP   96 (109)
Q Consensus        81 ~~~~------~l~~~~~~~~~~   96 (109)
                      +++|      +++||||++...
T Consensus       278 t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          278 GCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             TSGGGTCHHHHHTSGGGTTCCC
T ss_pred             ChHHHcCCHHHHCCCCcCCCCH
Confidence            9987      589999998753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.93  E-value=9.4e-26  Score=134.45  Aligned_cols=92  Identities=28%  Similarity=0.472  Sum_probs=73.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+ . |+.++|+||+||++|+|++|..||.+............... .+..+...++++++|+.+||..+|++|
T Consensus       197 mAPE~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  274 (290)
T 3fpq_A          197 MAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             CCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred             cCHHHcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHC
Confidence            79998853 4 89999999999999999999999976554444444333332 223455678899999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      |+++++++||||+..
T Consensus       275 ~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          275 YSIKDLLNHAFFQEE  289 (290)
T ss_dssp             CCHHHHHTSGGGC--
T ss_pred             cCHHHHhcCccccCC
Confidence            999999999999853

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=3.7e-25  Score=137.31  Aligned_cols=96  Identities=38%  Similarity=0.542  Sum_probs=78.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++||||+||++|+|++|..||.+......+..+..... ....+..++.++++|+.+||..||++|
T Consensus       314 mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  392 (423)
T 4fie_A          314 MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR  392 (423)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHC
Confidence            7999987655 89999999999999999999999988766666555443322 123356789999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCc
Q 033880           80 PTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~   97 (109)
                      ++++|+++||||+...+.
T Consensus       393 ~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          393 ATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             CCHHHHTTCGGGGGCCCG
T ss_pred             cCHHHHhcCHHhcCCCCC
Confidence            999999999999876543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=1.2e-25  Score=136.66  Aligned_cols=91  Identities=26%  Similarity=0.519  Sum_probs=78.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+....+..+.... .++.+...+.++++|+.+||..||++||
T Consensus       192 mAPE~l~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~  269 (350)
T 4b9d_A          192 LSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDRP  269 (350)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHccCChhHCc
Confidence            7999997655 9999999999999999999999999877666665555443 3455778899999999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      +++++++||||+.
T Consensus       270 s~~e~l~hp~~~~  282 (350)
T 4b9d_A          270 SVNSILEKGFIAK  282 (350)
T ss_dssp             CHHHHHTSHHHHT
T ss_pred             CHHHHhcCHHhhc
Confidence            9999999999974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.91  E-value=2.3e-24  Score=133.30  Aligned_cols=96  Identities=23%  Similarity=0.330  Sum_probs=75.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---------------------C----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---------------------T----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~----   55 (109)
                      ||||++.+..+++.++|+||+||++|+|++|..||.+.+....+..+......+                     .    
T Consensus       229 ~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
T 4b99_A          229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPV  308 (398)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCC
T ss_pred             cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCC
Confidence            799998776668999999999999999999999998876655544432111100                     0    


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                          .....+.++.+|+.+||..||++|++++++++||||+....
T Consensus       309 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          309 PWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             CHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence                01246788999999999999999999999999999987543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.90  E-value=1.2e-23  Score=128.72  Aligned_cols=95  Identities=28%  Similarity=0.437  Sum_probs=69.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHhhC------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGN------------------------------   49 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~~~~------------------------------   49 (109)
                      ||||++.+...|+.++|+||+||++|+|++|..||... +....+..+..                              
T Consensus       213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  292 (361)
T 4f9c_A          213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR  292 (361)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred             cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence            79999876656899999999999999999999998543 22222111100                              


Q ss_pred             -------C-C--------------CCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           50 -------S-K--------------ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        50 -------~-~--------------~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                             . .              .....+...+.++.+|+.+||..||++|++++|+++||||+...
T Consensus       293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence                   0 0              00011345678999999999999999999999999999998753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.90  E-value=4.8e-24  Score=129.20  Aligned_cols=95  Identities=32%  Similarity=0.564  Sum_probs=75.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.........+..... ....+..++..+.+++.+||..+|++|
T Consensus       223 mAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  301 (336)
T 4g3f_A          223 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHR  301 (336)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHC
Confidence            7999997655 99999999999999999999999987654444444333322 123567789999999999999999999


Q ss_pred             CcHHHH-------------hcCcccCCCCC
Q 033880           80 PTAVKL-------------LDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~-------------l~~~~~~~~~~   96 (109)
                      |++.|+             ++|||+.....
T Consensus       302 ~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          302 ASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             CCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             cCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence            999997             57999876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.89  E-value=2.4e-23  Score=133.62  Aligned_cols=96  Identities=24%  Similarity=0.397  Sum_probs=79.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+....+..+......  ...+..++.++++|+.+||..||.+
T Consensus       323 ~APEv~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~  401 (573)
T 3uto_A          323 AAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT  401 (573)
T ss_dssp             CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred             cCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence            7999997655 899999999999999999999999987766666655544332  1234568899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCc
Q 033880           79 RPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~   97 (109)
                      |+++.++++||||+.....
T Consensus       402 R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          402 RMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             SCCHHHHHHSTTTSCCCCT
T ss_pred             CcCHHHHhcCcCcCCCCCC
Confidence            9999999999999975443

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.89  E-value=8.2e-24  Score=129.06  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=72.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++||||+||++||+++ |..||.+......+.........+..|..+++++.+++.+||..+|++|
T Consensus       254 mAPE~l~~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~R  332 (353)
T 4ase_A          254 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  332 (353)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHhcCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHC
Confidence            7999997765 9999999999999999998 8999987654444444433334455678889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++|
T Consensus       333 Pt~~eil~~  341 (353)
T 4ase_A          333 PTFSELVEH  341 (353)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=2.1e-23  Score=135.10  Aligned_cols=94  Identities=24%  Similarity=0.388  Sum_probs=75.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--HHH-HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--AAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      ||||++.....|+.++|+||+||++|+|++|..||.+....  ... ..+....  ...|..++.++++|+.+||..+|.
T Consensus       357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~--~~~p~~~S~~a~dLI~~lL~~dP~  434 (689)
T 3v5w_A          357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVN  434 (689)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCGG
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC--CCCCccCCHHHHHHHHHHccCCHh
Confidence            79999975545999999999999999999999999764322  111 2222222  245778899999999999999999


Q ss_pred             CCCc-----HHHHhcCcccCCCCC
Q 033880           78 NRPT-----AVKLLDHPFVKGAAP   96 (109)
Q Consensus        78 ~R~~-----~~~~l~~~~~~~~~~   96 (109)
                      +|++     ++++++||||++...
T Consensus       435 ~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          435 RRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             GCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             HCCCCCCCCHHHHhcCccccCCCH
Confidence            9997     799999999998743

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=5.3e-23  Score=123.58  Aligned_cols=86  Identities=26%  Similarity=0.410  Sum_probs=72.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++||||+||++||+++ |..||.+.........+.... .++.|..++..+.+++.+||..+|++|
T Consensus       214 mAPE~l~~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~R  291 (308)
T 4gt4_A          214 MAPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPSRR  291 (308)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHhCCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCcccchHHHHHHHHHHcCCChhHC
Confidence            7999997765 9999999999999999998 899998877665555554443 345678899999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       292 Ps~~ei~~~  300 (308)
T 4gt4_A          292 PRFKDIHSR  300 (308)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.88  E-value=1.6e-23  Score=125.47  Aligned_cols=95  Identities=23%  Similarity=0.378  Sum_probs=66.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+||++|+|++   ||...... ......... ..++.....++...+|+.+||..+|++|
T Consensus       197 mAPE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~~L~~dP~~R  271 (299)
T 4g31_A          197 MSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNL-KFPPLFTQKYPCEYVMVQDMLSPSPMER  271 (299)
T ss_dssp             SCHHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTT-CCCHHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcC-CCCCCCcccCHHHHHHHHHHcCCChhHC
Confidence            7999997655 9999999999999999996   77654322 222222222 2222223345667889999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcccc
Q 033880           80 PTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      |++.++++|+||+......+.
T Consensus       272 ps~~eil~h~~~~~~~~p~~~  292 (299)
T 4g31_A          272 PEAINIIENAVFEDLDFPGKT  292 (299)
T ss_dssp             CCHHHHHTSGGGCCC------
T ss_pred             cCHHHHhcCHhhCCCCCCCch
Confidence            999999999999987554443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.87  E-value=1.7e-22  Score=122.32  Aligned_cols=86  Identities=28%  Similarity=0.430  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+||++||+++ |+.||.+.........+.... .+..|..+++++.+++.+||..+|++|
T Consensus       227 mAPE~~~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~R  304 (329)
T 4aoj_A          227 MPPESILYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQR  304 (329)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred             cChhhhcCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChhHC
Confidence            7999997655 9999999999999999998 899998876665555444433 345678899999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       305 Ps~~ei~~~  313 (329)
T 4aoj_A          305 HSIKDVHAR  313 (329)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.87  E-value=1.7e-22  Score=120.97  Aligned_cols=84  Identities=27%  Similarity=0.432  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+||++||+++ |+.||.+.........+.... .+..|..++.++.+|+.+||..+|++|
T Consensus       197 mAPE~~~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~R  274 (299)
T 4asz_A          197 MPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMR  274 (299)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHC
Confidence            7999997765 9999999999999999998 899998876665555544443 345678899999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |+++++.
T Consensus       275 Ps~~~i~  281 (299)
T 4asz_A          275 KNIKGIH  281 (299)
T ss_dssp             CCHHHHH
T ss_pred             cCHHHHH
Confidence            9999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.87  E-value=6.9e-22  Score=119.66  Aligned_cols=93  Identities=20%  Similarity=0.356  Sum_probs=76.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+....+.++|+||+||++|++++|..||.+.+.......+.....  ..+...+..+.+++.+||..+|.+||
T Consensus       180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~  257 (328)
T 3fe3_A          180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDCENLLKRFLVLNPIKRG  257 (328)
T ss_dssp             CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHCCSSTTTSC
T ss_pred             eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHCCCChhHCc
Confidence            5899887666456899999999999999999999988765555544444332  44667899999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++||||+...
T Consensus       258 t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          258 TLEQIMKDRWINAGH  272 (328)
T ss_dssp             CHHHHTTCTTTTTTC
T ss_pred             CHHHHhcCHhhcCCC
Confidence            999999999998643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=1.3e-21  Score=118.86  Aligned_cols=92  Identities=27%  Similarity=0.441  Sum_probs=76.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+|+++|+|++|..||.+.........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       172 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          172 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             CCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             CChhhhcCCC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhc
Confidence            6899987655 89999999999999999999999987665544444433322  45677899999999999999999999


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++|+||.+..
T Consensus       249 g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          249 GGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             TCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCHHHHHcCCCcCCCC
Confidence                 899999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.86  E-value=6.9e-22  Score=118.65  Aligned_cols=87  Identities=21%  Similarity=0.359  Sum_probs=67.5

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh-CCCCC---CCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG-NSKEL---PTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      ||||++...  ..|+.++||||+||++|||++|..||.+........... .....   +..+..++..+.+++.+||..
T Consensus       201 mAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~  280 (307)
T 3omv_A          201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKK  280 (307)
T ss_dssp             CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCS
T ss_pred             cCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCC
Confidence            799998632  348999999999999999999999998765444443332 22222   234567889999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||++.++++
T Consensus       281 dP~~RPs~~ei~~  293 (307)
T 3omv_A          281 VKEERPLFPQILS  293 (307)
T ss_dssp             SSTTSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999998754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=3.5e-22  Score=121.98  Aligned_cols=92  Identities=25%  Similarity=0.437  Sum_probs=77.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       191 ~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~lL~~dP~~R~  267 (353)
T 3txo_A          191 IAPEILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--VYPTWLHEDATGILKSFMTKNPTMRL  267 (353)
T ss_dssp             CCHHHHHHHH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             EChhhcCCCC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhhCHHHcc
Confidence            6899886655 89999999999999999999999988776666555544433  44667899999999999999999999


Q ss_pred             cH------HHHhcCcccCCCC
Q 033880           81 TA------VKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~------~~~l~~~~~~~~~   95 (109)
                      ++      +++++||||++..
T Consensus       268 ~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          268 GSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             TSGGGTCTHHHHTSGGGTTCC
T ss_pred             CCcccCCHHHHhhCCcccCCC
Confidence            98      8999999999763

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.86  E-value=1.2e-21  Score=117.08  Aligned_cols=97  Identities=36%  Similarity=0.591  Sum_probs=77.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+..... ....+...+..+.+++.+||..+|++|
T Consensus       183 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  261 (297)
T 3fxz_A          183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR  261 (297)
T ss_dssp             CCHHHHHCSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHC
Confidence            5899886655 89999999999999999999999987665554443322221 223356678999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCCcc
Q 033880           80 PTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~   98 (109)
                      |+++++++|+||+...+..
T Consensus       262 ps~~ell~h~~~~~~~~~~  280 (297)
T 3fxz_A          262 GSAKELLQHQFLKIAKPLS  280 (297)
T ss_dssp             CCHHHHTTCGGGGGCCCGG
T ss_pred             cCHHHHhhChhhcccCccc
Confidence            9999999999999765543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.86  E-value=1.2e-21  Score=122.24  Aligned_cols=97  Identities=27%  Similarity=0.442  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------C-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------P-----   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~-----   54 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+......+..+......                     +     
T Consensus       266 ~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (429)
T 3kvw_A          266 RAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTV  344 (429)
T ss_dssp             CCHHHHHTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCE
T ss_pred             cChHHHhCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccc
Confidence            6899987665 899999999999999999999999876544433222110000                     0     


Q ss_pred             -----------------------C--------CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           55 -----------------------T--------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        55 -----------------------~--------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                                             +        .....+..+.+|+.+||..+|++||+++++++||||+...+..
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~  419 (429)
T 3kvw_A          345 TTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP  419 (429)
T ss_dssp             ECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC------
T ss_pred             cccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCC
Confidence                                   0        0112367889999999999999999999999999999764433

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=1.9e-21  Score=118.75  Aligned_cols=92  Identities=21%  Similarity=0.371  Sum_probs=76.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+|+++|+|++|..||.+.........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       188 ~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~  264 (353)
T 2i0e_A          188 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKRL  264 (353)
T ss_dssp             CCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTSCT
T ss_pred             cChhhhcCCC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence            6899886655 89999999999999999999999987765555555444332  45677899999999999999999999


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++|+||++..
T Consensus       265 ~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          265 GCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             TCSTTHHHHHHTSGGGTTCC
T ss_pred             CCCCCCHHHHhcCccccCCC
Confidence                 469999999998764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.86  E-value=2.3e-21  Score=116.91  Aligned_cols=92  Identities=25%  Similarity=0.433  Sum_probs=76.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.+.......+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       170 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~lL~~dp~~R~  246 (318)
T 1fot_A          170 IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL--RFPPFFNEDVKDLLSRLITRDLSQRL  246 (318)
T ss_dssp             CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTCT
T ss_pred             cCHhHhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhccCHHHcC
Confidence            6899886554 89999999999999999999999987665555555444332  45677899999999999999999999


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++||||++..
T Consensus       247 ~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          247 GNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             TSSTTTTHHHHTSGGGSSCC
T ss_pred             CCcCCCHHHHhcCccccCCC
Confidence                 899999999998753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=2.6e-21  Score=118.07  Aligned_cols=92  Identities=30%  Similarity=0.450  Sum_probs=77.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       205 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~lL~~dp~~R~  281 (350)
T 1rdq_E          205 LAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV--RFPSHFSSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTCCHHHHHHHHHHSCSCTTTCT
T ss_pred             cCHHHhcCCC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHhcc
Confidence            6899886654 89999999999999999999999987765555555444432  45677899999999999999999999


Q ss_pred             c-----HHHHhcCcccCCCC
Q 033880           81 T-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~~   95 (109)
                      +     ++++++|+||.+..
T Consensus       282 ~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          282 GNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             TSSTTTTHHHHTSGGGTTCC
T ss_pred             CCccCCHHHHHhCcCcCCCC
Confidence            8     99999999998754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=1.9e-21  Score=119.81  Aligned_cols=95  Identities=31%  Similarity=0.476  Sum_probs=73.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC-------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT-------------------------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------   55 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+......+..+......|.                         
T Consensus       197 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (388)
T 3oz6_A          197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEI  276 (388)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-
T ss_pred             CCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccc
Confidence            6899887655689999999999999999999999987765554433321111000                         


Q ss_pred             --------------------CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 --------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 --------------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                                          .+...+..+.+|+.+||..+|++||+++++++||||+...
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          277 RQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             ----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             cCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                                0125678899999999999999999999999999998643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.85  E-value=2.1e-21  Score=121.51  Aligned_cols=92  Identities=27%  Similarity=0.464  Sum_probs=76.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+|+
T Consensus       316 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          316 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--RFPRTLGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             CCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             cCHhhcCCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHHcccCHHHhC
Confidence            6899886655 89999999999999999999999987665555444433332  34667889999999999999999999


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++||||.+..
T Consensus       393 ~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          393 GGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             TCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCHHHHHhCccccCCC
Confidence                 999999999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=1.9e-21  Score=116.84  Aligned_cols=96  Identities=31%  Similarity=0.496  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CCCCC-----------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKELP-----------------------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------------------   54 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..   .....                       
T Consensus       186 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (311)
T 3niz_A          186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKP  265 (311)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCC
T ss_pred             CCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCc
Confidence            5899886655589999999999999999999999976544333322211   10000                       


Q ss_pred             --CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           55 --TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        55 --~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                        ......+.++.+|+.+||..+|++||+++++++||||+...+
T Consensus       266 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          266 WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence              011235678999999999999999999999999999997653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.85  E-value=2.2e-21  Score=115.30  Aligned_cols=94  Identities=28%  Similarity=0.520  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CCCC-------------C----------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKEL-------------P----------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~~~-------------~----------   54 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||.+.........+..   ....             +          
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T 1ob3_A          167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW  246 (288)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred             cCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccH
Confidence            6899886555589999999999999999999999987654444332211   0000             0          


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                       ......+..+.+++.+||..+|++||+++++++||||+..
T Consensus       247 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence             0123467889999999999999999999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.85  E-value=1.6e-21  Score=117.88  Aligned_cols=95  Identities=31%  Similarity=0.532  Sum_probs=72.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC----------------C--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----------------I--------   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~--------   56 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+.........+......+.                .        
T Consensus       204 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (329)
T 3gbz_A          204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTL  283 (329)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCH
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccH
Confidence            5899887655589999999999999999999999987665544433321100000                0        


Q ss_pred             ----CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           57 ----PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        57 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                          +...+..+.+|+.+||..+|++||+++++++||||+...
T Consensus       284 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          284 KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             HHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                011568899999999999999999999999999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.85  E-value=3.5e-21  Score=117.87  Aligned_cols=94  Identities=23%  Similarity=0.361  Sum_probs=75.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+.......  ..+...+..+++|+.+||..+|++
T Consensus       185 ~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  263 (361)
T 2yab_A          185 VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRK  263 (361)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             ECchHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhH
Confidence            6899886554 8999999999999999999999998776655555544333211  123567889999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++||||....
T Consensus       264 R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          264 RLTIQEALRHPWITPVD  280 (361)
T ss_dssp             SCCHHHHHTSTTTSCSS
T ss_pred             CcCHHHHhcCcCcCCCc
Confidence            99999999999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.85  E-value=5.6e-21  Score=124.64  Aligned_cols=92  Identities=21%  Similarity=0.373  Sum_probs=79.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+|+++|+|++|..||.+.+.......+.....  .++...+.++.+|+.+||..+|++|+
T Consensus       509 ~APE~l~~~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~  585 (674)
T 3pfq_A          509 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKRL  585 (674)
T ss_dssp             CCHHHHTCCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC--CCCTTSCHHHHHHHHHHSCSSSTTCT
T ss_pred             cCHhhhcCCC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHHccCCHHHCC
Confidence            6899986655 89999999999999999999999998776666666555443  45778899999999999999999999


Q ss_pred             cH-----HHHhcCcccCCCC
Q 033880           81 TA-----VKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~-----~~~l~~~~~~~~~   95 (109)
                      ++     +++++|+||++..
T Consensus       586 ~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          586 GCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             TCSTTHHHHHHSSGGGSSCC
T ss_pred             CCCCCcHHHHhcCccccCCC
Confidence            87     9999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.85  E-value=2.9e-21  Score=116.56  Aligned_cols=97  Identities=26%  Similarity=0.418  Sum_probs=73.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---C----------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---T----------------------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~----------------------   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+......+   .                      
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
T 3mtl_A          167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEA  246 (324)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCC
T ss_pred             cChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchh
Confidence            589988665558999999999999999999999998765544433321110000   0                      


Q ss_pred             ---CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 ---IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                         .....+..+.+|+.+||..+|++||+++++++||||......
T Consensus       247 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          247 LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence               012457889999999999999999999999999999876543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.85  E-value=5.3e-21  Score=114.11  Aligned_cols=92  Identities=25%  Similarity=0.378  Sum_probs=71.4

Q ss_pred             CCCcceecCCC--CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSG--CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~--~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+...  ++.++|+||+|+++|++++|..||...........+.......+.....+..+.+++.+||..+|++
T Consensus       204 ~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  283 (298)
T 2zv2_A          204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPES  283 (298)
T ss_dssp             CCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTT
T ss_pred             cChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhh
Confidence            68998865432  3678999999999999999999998765444333333332222234567899999999999999999


Q ss_pred             CCcHHHHhcCcccC
Q 033880           79 RPTAVKLLDHPFVK   92 (109)
Q Consensus        79 R~~~~~~l~~~~~~   92 (109)
                      ||++.++++||||+
T Consensus       284 R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          284 RIVVPEIKLHPWVT  297 (298)
T ss_dssp             SCCHHHHTTCHHHH
T ss_pred             CCCHHHHhcCcccc
Confidence            99999999999985

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.85  E-value=3.7e-21  Score=118.88  Aligned_cols=96  Identities=27%  Similarity=0.495  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------CCCCC-------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------KELPT-------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------~~~~~-------   55 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+.........+...                  ...+.       
T Consensus       208 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (394)
T 4e7w_A          208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFS  287 (394)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHH
T ss_pred             cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHH
Confidence            68998866555899999999999999999999999887655444332211                  00000       


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                        .+...+..+.+|+.+||..+|.+||++.++++||||+....
T Consensus       288 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          288 KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence              12347789999999999999999999999999999987544

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.85  E-value=2.7e-21  Score=116.40  Aligned_cols=99  Identities=29%  Similarity=0.408  Sum_probs=72.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-------------------C--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-------------------L--------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------~--------   53 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+.........+.....                   .        
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (317)
T 2pmi_A          175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDL  254 (317)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCS
T ss_pred             cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhH
Confidence            6899886555589999999999999999999999987655443332211000                   0        


Q ss_pred             -----CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCccc
Q 033880           54 -----PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        54 -----~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~   99 (109)
                           +......+..+.+|+.+||..+|++||+++++++||||+.....+.
T Consensus       255 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  305 (317)
T 2pmi_A          255 RQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS  305 (317)
T ss_dssp             HHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC---
T ss_pred             HHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhh
Confidence                 0012246788999999999999999999999999999987544433

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=2.8e-21  Score=119.04  Aligned_cols=96  Identities=30%  Similarity=0.508  Sum_probs=68.7

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC---------------------------
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE---------------------------   52 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------------   52 (109)
                      +|||++.+. ..++.++|+||+||++|++++|..||.+...............                           
T Consensus       202 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (389)
T 3gni_B          202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGL  281 (389)
T ss_dssp             SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------
T ss_pred             cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccc
Confidence            589988753 3488999999999999999999999976543333222111100                           


Q ss_pred             -----------------CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           53 -----------------LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        53 -----------------~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                                       ....+...+..+.+|+.+||..+|++||+++++++||||+....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          282 SDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                             00123456788999999999999999999999999999987643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.84  E-value=1.4e-20  Score=112.51  Aligned_cols=99  Identities=32%  Similarity=0.507  Sum_probs=77.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+.....  ....+...+..+.+++.+||..+|++
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  252 (304)
T 2jam_A          174 VAPEVLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNE  252 (304)
T ss_dssp             CCTTTBSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTT
T ss_pred             cChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhH
Confidence            5899986654 89999999999999999999999987655444433333222  12234567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCcccc
Q 033880           79 RPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      ||+++++++|+||.+.....+.
T Consensus       253 Rps~~~~l~h~~~~~~~~~~~~  274 (304)
T 2jam_A          253 RYTCEKALSHPWIDGNTALHRD  274 (304)
T ss_dssp             SCCHHHHHTSHHHHSSCSCCCC
T ss_pred             CcCHHHHhcCccccCCCccccc
Confidence            9999999999999887655443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.84  E-value=2.2e-21  Score=118.19  Aligned_cols=92  Identities=26%  Similarity=0.454  Sum_probs=76.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.+.......+....  +..+...+..+.+++.+||..+|++|+
T Consensus       185 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~lL~~dp~~R~  261 (345)
T 1xjd_A          185 IAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKRL  261 (345)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHSCSSGGGSB
T ss_pred             CChhhhcCCC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--CCCCcccCHHHHHHHHHHhcCCHhHcC
Confidence            6899886655 8999999999999999999999998776655554444332  245667899999999999999999999


Q ss_pred             cHH-HHhcCcccCCCC
Q 033880           81 TAV-KLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~-~~l~~~~~~~~~   95 (109)
                      ++. ++++||||++..
T Consensus       262 ~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          262 GVRGDIRQHPLFREIN  277 (345)
T ss_dssp             TTBSCGGGSGGGTTCC
T ss_pred             CChHHHHcCccccCCC
Confidence            998 999999998764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.84  E-value=3.9e-21  Score=115.16  Aligned_cols=94  Identities=29%  Similarity=0.488  Sum_probs=70.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---C----------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---T----------------------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~----------------------   55 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+......+   .                      
T Consensus       186 ~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (308)
T 3g33_A          186 RAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS  264 (308)
T ss_dssp             CCHHHHHTSC-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHH
T ss_pred             cCchHHcCCC-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHH
Confidence            6899887655 8999999999999999999999998766554443322110000   0                      


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      .....+..+.+++.+||..+|++||++.++++|+||+...
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          265 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             hCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            1134678899999999999999999999999999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.84  E-value=6.2e-21  Score=119.47  Aligned_cols=92  Identities=26%  Similarity=0.421  Sum_probs=74.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+......  .+.+...+..+.+++.+||..+|++
T Consensus       180 ~APE~l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  258 (444)
T 3soa_A          180 LSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK  258 (444)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             CCHHHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhH
Confidence            6899886554 899999999999999999999999877655555444433222  2223567899999999999999999


Q ss_pred             CCcHHHHhcCcccCC
Q 033880           79 RPTAVKLLDHPFVKG   93 (109)
Q Consensus        79 R~~~~~~l~~~~~~~   93 (109)
                      ||++.++++|||++.
T Consensus       259 Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          259 RITAAEALKHPWISH  273 (444)
T ss_dssp             SCCHHHHHHSCTTHH
T ss_pred             CCCHHHHhcCccccC
Confidence            999999999999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=7.2e-21  Score=116.96  Aligned_cols=92  Identities=23%  Similarity=0.391  Sum_probs=76.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.....  ..+...+..+.+++.+||..+|++|+
T Consensus       206 ~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~  282 (373)
T 2r5t_A          206 LAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRL  282 (373)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGST
T ss_pred             cCHHHhCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCC
Confidence            6899886654 89999999999999999999999987766555555444332  34667899999999999999999999


Q ss_pred             cH----HHHhcCcccCCCC
Q 033880           81 TA----VKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~----~~~l~~~~~~~~~   95 (109)
                      ++    .++++|+||++..
T Consensus       283 ~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          283 GAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             TTTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHhCCccccCCC
Confidence            86    6899999998864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.84  E-value=2.8e-21  Score=117.77  Aligned_cols=98  Identities=26%  Similarity=0.338  Sum_probs=73.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------   53 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||.+.........+......                           
T Consensus       198 ~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (360)
T 3e3p_A          198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS  277 (360)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHH
T ss_pred             eCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcc
Confidence            58998865555899999999999999999999999876554443332210000                           


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           54 ---PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        54 ---~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                         +......+..+.+|+.+||..+|.+||++.++++||||+......
T Consensus       278 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             HHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred             cccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence               011122457899999999999999999999999999998764433

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.84  E-value=5.4e-21  Score=118.95  Aligned_cols=94  Identities=23%  Similarity=0.410  Sum_probs=72.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------CCCCC-------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------KELPT-------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------~~~~~-------   55 (109)
                      +|||++.+...++.++|+||+||++|+|++|..||.+......+..+...                  ...+.       
T Consensus       223 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~  302 (420)
T 1j1b_A          223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT  302 (420)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHH
T ss_pred             CCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHH
Confidence            68998866545899999999999999999999999876654444332210                  00010       


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                        ++...+..+.+|+.+||..+|++|+++.++++|+||...
T Consensus       303 ~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence              123467899999999999999999999999999999764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.84  E-value=1.3e-20  Score=111.65  Aligned_cols=99  Identities=24%  Similarity=0.348  Sum_probs=77.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.........+......  .......+..+.+++.+||..+|++
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  252 (284)
T 3kk8_A          174 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK  252 (284)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             cCchhhcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhh
Confidence            5889886554 889999999999999999999999876655444443333221  1223467899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCcccc
Q 033880           79 RPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                      ||++.++++|+||+........
T Consensus       253 Rps~~~~l~h~~~~~~~~~~~~  274 (284)
T 3kk8_A          253 RITADQALKVPWICNRERVASA  274 (284)
T ss_dssp             SCCHHHHTTSHHHHSCCCGGGS
T ss_pred             CCCHHHHhcCccccCChhHHhH
Confidence            9999999999999876554443

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.83  E-value=3.9e-21  Score=113.73  Aligned_cols=95  Identities=28%  Similarity=0.538  Sum_probs=76.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+.....  ..+...+..+.+++.+||..+|++||
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp  250 (279)
T 3fdn_A          174 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRP  250 (279)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHCCSSGGGSC
T ss_pred             cCHhHhccCC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC--CCCCcCCHHHHHHHHHHhccChhhCC
Confidence            5888886544 88999999999999999999999987665555444433322  34667889999999999999999999


Q ss_pred             cHHHHhcCcccCCCCCcc
Q 033880           81 TAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~   98 (109)
                      +++++++|+||+......
T Consensus       251 s~~e~l~h~~~~~~~~~~  268 (279)
T 3fdn_A          251 MLREVLEHPWITANSSKP  268 (279)
T ss_dssp             CHHHHHHCHHHHHHCSSC
T ss_pred             CHHHHhhCccccCCccCc
Confidence            999999999998755443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.83  E-value=1.3e-20  Score=112.14  Aligned_cols=95  Identities=24%  Similarity=0.471  Sum_probs=69.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCC-CCCchhHHHHHHhhC---CC------------------------C
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMFKIGN---SK------------------------E   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p-~~~~~~~~~~~~~~~---~~------------------------~   52 (109)
                      +|||++.+...++.++|+||+|++++++++|..| |.+.........+..   ..                        .
T Consensus       168 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
T 3o0g_A          168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS  247 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCC
T ss_pred             cChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcc
Confidence            5899886655589999999999999999987766 444433333322211   00                        0


Q ss_pred             CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           53 LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        53 ~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      ........+..+.+|+.+||..+|++||+++++++||||+...
T Consensus       248 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             hhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            0011234678899999999999999999999999999998753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2e-20  Score=113.81  Aligned_cols=95  Identities=23%  Similarity=0.345  Sum_probs=72.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------CC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------PT----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~----   55 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||.+.........+......                     +.    
T Consensus       179 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (346)
T 1ua2_A          179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH  258 (346)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred             cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChH
Confidence            58998865555889999999999999999999999876655444332211000                     00    


Q ss_pred             -CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 -IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 -~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                       .....+..+.+++.+||..+|++||+++++++|+||....
T Consensus       259 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          259 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence             0134568899999999999999999999999999998653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.83  E-value=1.3e-20  Score=116.40  Aligned_cols=95  Identities=32%  Similarity=0.569  Sum_probs=72.9

Q ss_pred             CCCcceecC----------CCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKNS----------SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~~----------~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   69 (109)
                      ||||++.+.          ..++.++|+||+||++|++++|..||..... ......+.........+...+..+.+++.
T Consensus       223 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  302 (390)
T 2zmd_A          223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLK  302 (390)
T ss_dssp             CCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             cChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHH
Confidence            688887531          2488999999999999999999999976432 23333343333333445666889999999


Q ss_pred             HHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           70 LCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      +||..+|++||++.++++||||+...
T Consensus       303 ~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          303 CCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHcccChhhCCCHHHHhhCcCccccC
Confidence            99999999999999999999997643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=1.1e-20  Score=116.65  Aligned_cols=95  Identities=24%  Similarity=0.456  Sum_probs=75.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.....  ........+..+.+++.+||..+|++
T Consensus       217 ~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  295 (387)
T 1kob_A          217 AAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK  295 (387)
T ss_dssp             CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             cCchhccCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhH
Confidence            6899886554 88999999999999999999999987665555444433222  12234567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCC
Q 033880           79 RPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~   96 (109)
                      ||++.++++|+||++...
T Consensus       296 Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          296 RLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             SCCHHHHHTSTTTSSCCT
T ss_pred             CcCHHHHhhCccccCCcc
Confidence            999999999999987543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.83  E-value=1.7e-20  Score=111.54  Aligned_cols=92  Identities=27%  Similarity=0.472  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-CCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-SKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++. .. ++.++|+||+|++++++++|..||.............. .......+...+..+.+++.+||..+|.+|
T Consensus       197 ~aPE~~~-~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  274 (290)
T 1t4h_A          197 MAPEMYE-EK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             CCGGGGG-TC-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred             CCHHHHh-cc-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhC
Confidence            5899875 33 88999999999999999999999987544444333322 222223345567899999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      |+++++++||||+..
T Consensus       275 ps~~ell~h~~f~~~  289 (290)
T 1t4h_A          275 YSIKDLLNHAFFQEE  289 (290)
T ss_dssp             CCHHHHHTSGGGC--
T ss_pred             CCHHHHhhCcccccC
Confidence            999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.83  E-value=1.4e-20  Score=113.78  Aligned_cols=92  Identities=35%  Similarity=0.554  Sum_probs=75.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+|+
T Consensus       188 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dp~~R~  264 (327)
T 3a62_A          188 MAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL--NLPPYLTQEARDLLKKLLKRNAASRL  264 (327)
T ss_dssp             SCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHSCSCGGGST
T ss_pred             cCHhhCcCCC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHhcCHhhcc
Confidence            6899886654 89999999999999999999999987665555444433322  44667889999999999999999999


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           ++.++++||||+...
T Consensus       265 ~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          265 GAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             TSSTTTHHHHHHSGGGSSCC
T ss_pred             CCCCCCHHHHHcCCcccCCC
Confidence                 888999999998753

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.83  E-value=1.2e-20  Score=116.67  Aligned_cols=92  Identities=24%  Similarity=0.499  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh--------HH-HHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--------VA-AMFKIGNSKELPTIPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   71 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.....        .. ....+....  ...+...+..+.+|+.+|
T Consensus       220 ~aPE~l~~~~-~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~l  296 (396)
T 4dc2_A          220 IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKAASVLKSF  296 (396)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHH
T ss_pred             CCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc--cCCCCcCCHHHHHHHHHH
Confidence            6899987655 89999999999999999999999964211        11 112222222  245677899999999999


Q ss_pred             hhhCCCCCCcH------HHHhcCcccCCCC
Q 033880           72 LQRNPLNRPTA------VKLLDHPFVKGAA   95 (109)
Q Consensus        72 l~~~p~~R~~~------~~~l~~~~~~~~~   95 (109)
                      |..+|.+|+++      +++++||||++..
T Consensus       297 L~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          297 LNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             TCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             hcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence            99999999984      7999999999764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.83  E-value=1.8e-20  Score=113.18  Aligned_cols=94  Identities=20%  Similarity=0.282  Sum_probs=72.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||........ .................+..+.+|+.+||..+|++|
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  253 (323)
T 3tki_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR  253 (323)
T ss_dssp             SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhC
Confidence            5889887655457899999999999999999999976543322 222222222222235678999999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      |+++++++|+||+..
T Consensus       254 ~t~~eil~h~~~~~~  268 (323)
T 3tki_A          254 ITIPDIKKDRWYNKP  268 (323)
T ss_dssp             CCHHHHTTCTTTTCC
T ss_pred             cCHHHHhhChhhccc
Confidence            999999999999854

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.83  E-value=7.8e-21  Score=114.84  Aligned_cols=94  Identities=24%  Similarity=0.396  Sum_probs=73.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.... ++.++|+||+|+++|++++|..||.+.........+.......  ..+...+..+.+++.+||..+|++
T Consensus       184 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  262 (326)
T 2y0a_A          184 VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK  262 (326)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGG
T ss_pred             CCceeecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhh
Confidence            6899886544 8999999999999999999999998765554444333222111  122457889999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++||||+...
T Consensus       263 Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          263 RMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             SCCHHHHHHSTTTSCCS
T ss_pred             CCCHHHHhcCCCccCCc
Confidence            99999999999998754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.83  E-value=7.3e-21  Score=118.15  Aligned_cols=107  Identities=27%  Similarity=0.336  Sum_probs=79.5

Q ss_pred             CCCcceecCC---CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSS---GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK--ELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~---~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++.+..   .++.++|+||+|+++|+|++|..||.+.+.......+....  ...+.....+..+++|+.+||..+
T Consensus       236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~  315 (410)
T 3v8s_A          236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR  315 (410)
T ss_dssp             CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCG
T ss_pred             cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccCh
Confidence            6899886433   26789999999999999999999998776655555443321  111223468899999999999988


Q ss_pred             CCC--CCcHHHHhcCcccCCCCC---ccccccccccc
Q 033880           76 PLN--RPTAVKLLDHPFVKGAAP---LERTILAPELS  107 (109)
Q Consensus        76 p~~--R~~~~~~l~~~~~~~~~~---~~~~~~~~~~~  107 (109)
                      |.+  |++++++++||||++...   ..+...+|.++
T Consensus       316 ~~rlgR~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p  352 (410)
T 3v8s_A          316 EVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP  352 (410)
T ss_dssp             GGCTTSSCHHHHHTSGGGCCSSCCSTTGGGSCCSCCC
T ss_pred             hhhCCCCCHHHHhcCccccCCCHHHHhhcccCCCCCC
Confidence            888  999999999999998643   23334444443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.83  E-value=2e-20  Score=113.93  Aligned_cols=92  Identities=24%  Similarity=0.484  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch---------hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE---------GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   71 (109)
                      +|||++.+.. ++.++|+||+||++|+|++|..||....         .......+....  ...+...+..+.+++.+|
T Consensus       177 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~l  253 (345)
T 3a8x_A          177 IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKAASVLKSF  253 (345)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHH
T ss_pred             cCccccCCCC-CChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHH
Confidence            6899886654 8999999999999999999999996421         111112222222  245677899999999999


Q ss_pred             hhhCCCCCCcH------HHHhcCcccCCCC
Q 033880           72 LQRNPLNRPTA------VKLLDHPFVKGAA   95 (109)
Q Consensus        72 l~~~p~~R~~~------~~~l~~~~~~~~~   95 (109)
                      |..+|++|+++      +++++||||++..
T Consensus       254 L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          254 LNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             TCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             hcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            99999999985      7999999998754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.83  E-value=1.2e-21  Score=119.03  Aligned_cols=92  Identities=25%  Similarity=0.362  Sum_probs=72.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+....+.++|+||+|+++|++++|..||.+.........+..  .....+...+..+.+++.+||..+|.+||
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~~L~~dP~~Rp  251 (336)
T 3h4j_B          174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS--CVYVMPDFLSPGAQSLIRRMIVADPMQRI  251 (336)
T ss_dssp             SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS--SCCCCCTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CCCCCcccCCHHHHHHHHHHcCCChhHCc
Confidence            5899987655347899999999999999999999976543222211111  11234667889999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      +++++++||||+..
T Consensus       252 t~~eil~hp~~~~~  265 (336)
T 3h4j_B          252 TIQEIRRDPWFNVN  265 (336)
T ss_dssp             CHHHHTTCHHHHTT
T ss_pred             CHHHHHhChhhccC
Confidence            99999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2.3e-20  Score=114.46  Aligned_cols=96  Identities=28%  Similarity=0.398  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC-----------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-----------------------------   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-----------------------------   51 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+.+....+..+....                             
T Consensus       192 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (367)
T 1cm8_A          192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK  271 (367)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCC
T ss_pred             CCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCC
Confidence            689988764558999999999999999999999998765544433221100                             


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           52 ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        52 ~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .........+..+.+|+.+||..+|++|++++++++||||.....
T Consensus       272 ~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          272 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             CHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence            001123456889999999999999999999999999999987543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.83  E-value=1.2e-20  Score=114.99  Aligned_cols=95  Identities=36%  Similarity=0.603  Sum_probs=75.5

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++..  ...++.++|+||+|++++++++|..||.+.........+.............+..+.+++.+||..+|++
T Consensus       217 ~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  296 (348)
T 1u5q_A          217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD  296 (348)
T ss_dssp             CCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             eCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhh
Confidence            68998752  3348899999999999999999999998766555554444433332334567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||+++++++|+|+....
T Consensus       297 Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          297 RPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             SCCHHHHTTCHHHHSCC
T ss_pred             CcCHHHHhhChhhhccC
Confidence            99999999999997654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.83  E-value=1.8e-20  Score=113.91  Aligned_cols=94  Identities=32%  Similarity=0.579  Sum_probs=71.9

Q ss_pred             CCCcceec----------CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKN----------SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~----------~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   69 (109)
                      +|||++.+          ...++.++|+||+|+++|++++|..||..... ................+...+..+.+++.
T Consensus       176 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  255 (343)
T 3dbq_A          176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLK  255 (343)
T ss_dssp             CCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             CCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHH
Confidence            57887753          13478899999999999999999999976432 23333333333333456667889999999


Q ss_pred             HHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           70 LCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      +||..+|.+||++.++++||||+..
T Consensus       256 ~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          256 CCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHcCCChhHCCCHHHHHhCcccccc
Confidence            9999999999999999999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.83  E-value=5.2e-20  Score=112.11  Aligned_cols=96  Identities=30%  Similarity=0.413  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC-----------------------------CC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN-----------------------------SK   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------------~~   51 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..                             ..
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (353)
T 3coi_A          190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRK  269 (353)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSC
T ss_pred             CCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCc
Confidence            5899886645588999999999999999999999987654333222110                             00


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           52 ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        52 ~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .........+..+.+++.+||..+|++||++.++++||||+....
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  314 (353)
T 3coi_A          270 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  314 (353)
T ss_dssp             CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccC
Confidence            011223456889999999999999999999999999999987543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=1.2e-20  Score=114.43  Aligned_cols=96  Identities=23%  Similarity=0.321  Sum_probs=75.4

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++... ..++.++|+||+|+++|++++|..||.+.........+........  .....+..+.+++.+||..+|.
T Consensus       241 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             CCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred             cCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChh
Confidence            589988642 3488999999999999999999999987766555544443332211  1224688999999999999999


Q ss_pred             CCCcHHHHhcCcccCCCCC
Q 033880           78 NRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~~~   96 (109)
                      +||++.++++||||+....
T Consensus       321 ~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          321 ERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             TSCCHHHHHHSHHHHTTSS
T ss_pred             HCCCHHHHhcChhhccChH
Confidence            9999999999999987644

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.83  E-value=4.6e-21  Score=117.91  Aligned_cols=94  Identities=35%  Similarity=0.501  Sum_probs=67.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC-------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT-------------------------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------   55 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+......++                         
T Consensus       225 ~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (382)
T 2vx3_A          225 RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLK  303 (382)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEEC
T ss_pred             cChHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccc
Confidence            6899987655 89999999999999999999999987654443322211000000                         


Q ss_pred             --------C-CCC----------------------------CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 --------I-PDD----------------------------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 --------~-~~~----------------------------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                              . +..                            ....+.+|+.+||..+|++||+++++++||||+...
T Consensus       304 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          304 KTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             CCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence                    0 000                            013678999999999999999999999999998653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.83  E-value=1.1e-20  Score=113.15  Aligned_cols=98  Identities=24%  Similarity=0.560  Sum_probs=72.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--------------------CCCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--------------------SKELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--------------------~~~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..                    ....+.     
T Consensus       169 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T 4agu_A          169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME  248 (311)
T ss_dssp             CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred             cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence            5899887655589999999999999999999999987654443322110                    000000     


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                          .....+..+.+++.+||..+|++||+++++++||||+......
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE  295 (311)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC---
T ss_pred             hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHH
Confidence                0134678899999999999999999999999999999865443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.83  E-value=8.7e-21  Score=116.14  Aligned_cols=92  Identities=26%  Similarity=0.359  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.......  ..+...+..+.+++.+||..+|++
T Consensus       197 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (362)
T 2bdw_A          197 LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK  275 (362)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGG
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhh
Confidence            6899886554 8999999999999999999999998766554444443332211  122457899999999999999999


Q ss_pred             CCcHHHHhcCcccCC
Q 033880           79 RPTAVKLLDHPFVKG   93 (109)
Q Consensus        79 R~~~~~~l~~~~~~~   93 (109)
                      ||++.++++||||..
T Consensus       276 R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          276 RITADQALKVPWICN  290 (362)
T ss_dssp             SCCHHHHTTSHHHHT
T ss_pred             CcCHHHHhcCcccCC
Confidence            999999999999975

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=9.6e-21  Score=116.54  Aligned_cols=93  Identities=24%  Similarity=0.471  Sum_probs=72.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC------------------CC--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------------------LP--------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------~~--------   54 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+.........+.....                  .+        
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (383)
T 3eb0_A          208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR  287 (383)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH
T ss_pred             cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH
Confidence            5899886655589999999999999999999999987765554433321000                  00        


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                       ..+...+..+.+|+.+||..+|++||++.++++||||+.
T Consensus       288 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          288 KILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             hhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence             023457888999999999999999999999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.83  E-value=1.7e-20  Score=114.18  Aligned_cols=96  Identities=21%  Similarity=0.304  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--CCCCCCCCCC-------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIPDD-------------------   59 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~-------------------   59 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+..  ....+.....                   
T Consensus       195 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (351)
T 3mi9_A          195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  274 (351)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCC
T ss_pred             cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccC
Confidence            5899886655589999999999999999999999987655444333211  1111111111                   


Q ss_pred             ---------CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           60 ---------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        60 ---------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                               .+..+.+|+.+||..+|++||+++++++|+||.....
T Consensus       275 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          275 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             HHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence                     2567889999999999999999999999999986533

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.83  E-value=4.8e-20  Score=108.75  Aligned_cols=96  Identities=20%  Similarity=0.270  Sum_probs=72.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+...++.++|+||+|++++++++|..||........ .................+..+.+++.+||..+|++|
T Consensus       174 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  253 (276)
T 2yex_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR  253 (276)
T ss_dssp             CCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhC
Confidence            5899886555457899999999999999999999976543222 222222222122234578899999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |+++++++|+||+....
T Consensus       254 ps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          254 ITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             CCHHHHTTCTTTTCCCC
T ss_pred             CCHHHHhcCccccChhh
Confidence            99999999999986543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.83  E-value=2.8e-20  Score=112.21  Aligned_cols=95  Identities=40%  Similarity=0.578  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+...... .......+..+.+++.+||..+|++|
T Consensus       208 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  286 (321)
T 2c30_A          208 MAPEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER  286 (321)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhC
Confidence            5899886544 889999999999999999999999876555444433332211 11234568899999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |+++++++|+||.....
T Consensus       287 ps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          287 ATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             CCHHHHHTSGGGGGCCC
T ss_pred             cCHHHHhcChhhccCCC
Confidence            99999999999986543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=3.5e-20  Score=111.95  Aligned_cols=94  Identities=24%  Similarity=0.420  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS--KELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.... ++.++|+||+|++++++++|..||.+.........+...  ..........+..+.+++.+||..+|.+
T Consensus       200 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  278 (327)
T 3lm5_A          200 LAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEK  278 (327)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred             cCCeeecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhh
Confidence            5889886554 889999999999999999999999876655544433222  2222334567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||+++++++|+||+...
T Consensus       279 Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          279 RPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             SCCHHHHTTCGGGCCCC
T ss_pred             CcCHHHHhCCHhhcccc
Confidence            99999999999998753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.83  E-value=2.2e-20  Score=117.83  Aligned_cols=92  Identities=25%  Similarity=0.346  Sum_probs=75.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+....+.++|+||+|+++|++++|..||.+.........+.....  ..+...+..+.+++.+||..+|.+||
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~Li~~~L~~dP~~Rp  259 (476)
T 2y94_A          182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF--YTPQYLNPSVISLLKHMLQVDPMKRA  259 (476)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC--CCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc--CCCccCCHHHHHHHHHHcCCCchhCc
Confidence            5899887655457899999999999999999999987665555544444332  34667889999999999999999999


Q ss_pred             cHHHHhcCcccCCC
Q 033880           81 TAVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~~~~~l~~~~~~~~   94 (109)
                      +++++++||||+..
T Consensus       260 t~~eil~hp~~~~~  273 (476)
T 2y94_A          260 TIKDIREHEWFKQD  273 (476)
T ss_dssp             CHHHHHTCHHHHTT
T ss_pred             CHHHHHhCHHhhhc
Confidence            99999999999764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.82  E-value=1.2e-20  Score=111.52  Aligned_cols=93  Identities=32%  Similarity=0.583  Sum_probs=59.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||................  ...+...+..+.+++.+||..+|++||
T Consensus       179 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp  255 (278)
T 3cok_A          179 ISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRL  255 (278)
T ss_dssp             --------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCC
Confidence            5899886544 7889999999999999999999997654333332222221  134566789999999999999999999


Q ss_pred             cHHHHhcCcccCCCCC
Q 033880           81 TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~   96 (109)
                      +++++++|+||.....
T Consensus       256 s~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          256 SLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             CHHHHTTSTTTC----
T ss_pred             CHHHHhcCccccCCCC
Confidence            9999999999987543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.82  E-value=1.3e-20  Score=111.89  Aligned_cols=94  Identities=34%  Similarity=0.574  Sum_probs=70.4

Q ss_pred             CCCccee---cCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-hHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~---~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++.   ....++.++|+||+|++++++++|..||.... .....................+..+.+++.+||..+|
T Consensus       176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (290)
T 3fme_A          176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNS  255 (290)
T ss_dssp             SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSG
T ss_pred             cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcCh
Confidence            5788862   23348899999999999999999999997532 2222333322322222345678999999999999999


Q ss_pred             CCCCcHHHHhcCcccCCC
Q 033880           77 LNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~   94 (109)
                      ++||++.++++||||+..
T Consensus       256 ~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          256 KERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             GGSCCHHHHTTSHHHHHH
T ss_pred             hhCcCHHHHHhCcccccC
Confidence            999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.82  E-value=2.6e-20  Score=113.97  Aligned_cols=94  Identities=21%  Similarity=0.235  Sum_probs=68.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH----HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV----AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++.+....+.++|+||+|+++|++++|..||.+....    .....+.......+.....+..+.+|+.+||..+|
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  263 (361)
T 3uc3_A          184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADP  263 (361)
T ss_dssp             SCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCT
T ss_pred             CChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCCh
Confidence            58998876653445599999999999999999999764322    22222222222222234578999999999999999


Q ss_pred             CCCCcHHHHhcCcccCCC
Q 033880           77 LNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~   94 (109)
                      .+||++.++++|+||...
T Consensus       264 ~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          264 ATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             TTSCCHHHHHTSHHHHTT
T ss_pred             hHCcCHHHHHhCcchhcC
Confidence            999999999999999653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.82  E-value=2e-20  Score=114.44  Aligned_cols=94  Identities=26%  Similarity=0.446  Sum_probs=71.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------------CCCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------------KELPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~-   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+...                        ..... 
T Consensus       198 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (364)
T 3qyz_A          198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV  277 (364)
T ss_dssp             CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred             CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCC
Confidence            58898765555899999999999999999999999876543333222110                        00000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                          .....+..+.+|+.+||..+|++||++.++++||||+..
T Consensus       278 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             CHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                123467889999999999999999999999999999875

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.82  E-value=1.6e-20  Score=111.35  Aligned_cols=92  Identities=28%  Similarity=0.482  Sum_probs=75.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+.....  ..+...+..+.+++.+||..+|++||
T Consensus       179 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp  255 (284)
T 2vgo_A          179 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRL  255 (284)
T ss_dssp             CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCHHHhccCC-CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCC
Confidence            5888886544 88999999999999999999999987655544444433322  34667889999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+||+...
T Consensus       256 s~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          256 PLKGVMEHPWVKANS  270 (284)
T ss_dssp             CHHHHHTCHHHHHHC
T ss_pred             CHHHHhhCHHHHhhc
Confidence            999999999998643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.82  E-value=2.1e-20  Score=113.65  Aligned_cols=96  Identities=26%  Similarity=0.446  Sum_probs=72.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---C----------------------CCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---S----------------------KELP-   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~----------------------~~~~-   54 (109)
                      +|||++.....++.++|+||+|++++++++|..||.+.........+..   .                      ...+ 
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA  268 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCC
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCC
Confidence            5889876545589999999999999999999999987654433322110   0                      0000 


Q ss_pred             ----CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           55 ----TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        55 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                          ......+..+.+++.+||..+|++||++.++++||||+....
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          269 APLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             cchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence                012356788999999999999999999999999999987543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.82  E-value=2.7e-20  Score=114.18  Aligned_cols=96  Identities=30%  Similarity=0.402  Sum_probs=72.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC------------------------CC--
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------------------------LP--   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------------~~--   54 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+.....                        .+  
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (371)
T 4exu_A          208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRK  287 (371)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCC
T ss_pred             cCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcch
Confidence            5899887645589999999999999999999999987654443332211000                        00  


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           55 ---TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        55 ---~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                         ......+..+.+|+.+||..+|++||++.++++||||+....
T Consensus       288 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  332 (371)
T 4exu_A          288 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  332 (371)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             hHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCC
Confidence               012346889999999999999999999999999999986543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.82  E-value=7.8e-20  Score=110.06  Aligned_cols=97  Identities=33%  Similarity=0.533  Sum_probs=74.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-------------------------CCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-------------------------LPT   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~   55 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.........+.....                         ...
T Consensus       186 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (326)
T 1blx_A          186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  264 (326)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             eCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhh
Confidence            5889886554 89999999999999999999999987654443332211000                         001


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      .....+..+.+++.+||..+|++||++.++++|+||+......
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~  307 (326)
T 1blx_A          265 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK  307 (326)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             ccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchhh
Confidence            2345788899999999999999999999999999998765443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.82  E-value=2.3e-20  Score=113.73  Aligned_cols=95  Identities=27%  Similarity=0.443  Sum_probs=74.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||....... ....+......  .......+..+.+++.+||..+|+
T Consensus       217 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  295 (349)
T 2w4o_A          217 CAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPK  295 (349)
T ss_dssp             SCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             cCHHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChh
Confidence            5899886554 8999999999999999999999997654433 22233222221  223456789999999999999999


Q ss_pred             CCCcHHHHhcCcccCCCCC
Q 033880           78 NRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~~~   96 (109)
                      +||++.++++||||.+...
T Consensus       296 ~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          296 KRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             GSCCHHHHHHSTTTTSTTC
T ss_pred             hCcCHHHHhcCcccCCCcc
Confidence            9999999999999987644

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.82  E-value=5.2e-20  Score=111.24  Aligned_cols=96  Identities=25%  Similarity=0.378  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-------HHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-------VAAMFKIGNSKELPT--IPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~   71 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+...       ......+........  .+...+..+.+|+.+|
T Consensus       176 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  254 (325)
T 3kn6_A          176 AAPELLNQNG-YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGL  254 (325)
T ss_dssp             --------CC-CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHH
T ss_pred             cCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHH
Confidence            5899986655 89999999999999999999999976432       122222322222111  1134788999999999


Q ss_pred             hhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           72 LQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      |..+|.+||+++++++|+||+.....
T Consensus       255 L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          255 LTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             HCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             CCCChhHCCCHHHHhcChhhccCccC
Confidence            99999999999999999999875443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.82  E-value=3.6e-20  Score=109.33  Aligned_cols=93  Identities=27%  Similarity=0.356  Sum_probs=74.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+....+.++|+||+|++++++++|..||...........+.....  ..+...+..+.+++.+||..+|++||
T Consensus       177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp  254 (276)
T 2h6d_A          177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF--YIPEYLNRSVATLLMHMLQVDPLKRA  254 (276)
T ss_dssp             CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc--cCchhcCHHHHHHHHHHccCChhhCC
Confidence            5899887655347899999999999999999999987655444433333322  34566789999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+||+...
T Consensus       255 s~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          255 TIKDIREHEWFKQDL  269 (276)
T ss_dssp             CHHHHHHSHHHHTTC
T ss_pred             CHHHHHhChhhccCc
Confidence            999999999997653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.82  E-value=3.8e-20  Score=114.60  Aligned_cols=94  Identities=27%  Similarity=0.451  Sum_probs=71.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH----HHHHhhCCCC--CCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA----AMFKIGNSKE--LPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.....    ....+.....  ....+...+..+.+|+.+||..
T Consensus       230 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  308 (400)
T 1nxk_A          230 VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT  308 (400)
T ss_dssp             CCGGGSCCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCS
T ss_pred             cCHhhcCCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCC
Confidence            6899986554 8999999999999999999999997643211    1111111111  1122356789999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      +|++||++.++++|+||....
T Consensus       309 dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          309 EPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             SGGGSCCHHHHHHSHHHHTTT
T ss_pred             ChhHCcCHHHHhcCccccCCC
Confidence            999999999999999997643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.82  E-value=2.1e-20  Score=114.60  Aligned_cols=97  Identities=24%  Similarity=0.330  Sum_probs=73.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC------------------------CCCCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS------------------------KELPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~-   55 (109)
                      +|||++.+...++.++|+||+||+++++++|..||.+.+....+..+...                        ...+. 
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (367)
T 2fst_X          196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  275 (367)
T ss_dssp             CCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCC
T ss_pred             cChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCC
Confidence            58998876455899999999999999999999999876654443322110                        00000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                          .....+..+.+|+.+||..+|++||++.++++||||......
T Consensus       276 ~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          276 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  321 (367)
T ss_dssp             CHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             CHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCC
Confidence                012457889999999999999999999999999999875443

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=4.6e-20  Score=109.81  Aligned_cols=93  Identities=28%  Similarity=0.559  Sum_probs=75.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+|++|++++++++|..||...........+.....  ..+...+..+.+++.+||..+|++||
T Consensus       182 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp  258 (294)
T 2rku_A          182 IAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARP  258 (294)
T ss_dssp             CCHHHHTTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCcchhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC--CCccccCHHHHHHHHHHcccChhhCc
Confidence            5788876544 78899999999999999999999987665555444443332  34667889999999999999999999


Q ss_pred             cHHHHhcCcccCCCCC
Q 033880           81 TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~   96 (109)
                      +++++++|+||.....
T Consensus       259 s~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          259 TINELLNDEFFTSGYI  274 (294)
T ss_dssp             CGGGGGGSHHHHTSCC
T ss_pred             CHHHHhhChheecCCc
Confidence            9999999999986543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.82  E-value=3.2e-20  Score=111.82  Aligned_cols=96  Identities=33%  Similarity=0.590  Sum_probs=73.6

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++..    ...++.++|+||+|+++|++++|..||...........+.............+..+.+++.+||..+|
T Consensus       196 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  275 (326)
T 2x7f_A          196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNH  275 (326)
T ss_dssp             CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSG
T ss_pred             cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccCh
Confidence            57888752    23478899999999999999999999987655544444333322222345678999999999999999


Q ss_pred             CCCCcHHHHhcCcccCCCCC
Q 033880           77 LNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        77 ~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .+||++.++++|+||+....
T Consensus       276 ~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          276 SQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             GGSCCHHHHHTSHHHHCCTT
T ss_pred             hhCCCHHHHhhChHHhhCcc
Confidence            99999999999999987544

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.81  E-value=1.4e-20  Score=114.73  Aligned_cols=91  Identities=29%  Similarity=0.417  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC------------------------CC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP------------------------TI   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~   56 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+.........+.......                        ..
T Consensus       226 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  304 (360)
T 3llt_A          226 RAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAW  304 (360)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECT
T ss_pred             cCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecC
Confidence            6899887655 8999999999999999999999998755443332221110000                        00


Q ss_pred             C--------------------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccC
Q 033880           57 P--------------------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        57 ~--------------------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   92 (109)
                      +                    ...+..+.+|+.+||..+|++||+++++++||||+
T Consensus       305 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          305 PENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            0                    01236677999999999999999999999999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.81  E-value=1.2e-20  Score=114.79  Aligned_cols=93  Identities=31%  Similarity=0.470  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch---hHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE---GVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+..   .......+......  ...+...+..+.+++.+||..+
T Consensus       187 ~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  265 (342)
T 2qr7_A          187 VAPEVLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVD  265 (342)
T ss_dssp             CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSS
T ss_pred             cCHHHhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCC
Confidence            5888876544 7889999999999999999999997532   22222233222221  1234568899999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |++||++.++++||||...
T Consensus       266 P~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          266 PHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             TTTSCCHHHHTTSHHHHTG
T ss_pred             hhHCcCHHHHhcCCeecCc
Confidence            9999999999999999653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=1.3e-20  Score=117.86  Aligned_cols=96  Identities=27%  Similarity=0.400  Sum_probs=74.7

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS---KELPTIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~l~   73 (109)
                      ||||++..    ...++.++|+||+||++|+|++|..||.+.+.......+...   ...+......+..+++|+.+||.
T Consensus       243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~  322 (437)
T 4aw2_A          243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC  322 (437)
T ss_dssp             CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSS
T ss_pred             eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhc
Confidence            68998862    334889999999999999999999999877665555444322   12233334588999999999998


Q ss_pred             hCCCC--CCcHHHHhcCcccCCCCC
Q 033880           74 RNPLN--RPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        74 ~~p~~--R~~~~~~l~~~~~~~~~~   96 (109)
                      .+|+.  |++++++++||||++...
T Consensus       323 ~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          323 SREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             CGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             ccccccCCCCHHHHhCCCccCCCCH
Confidence            87777  899999999999998643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.81  E-value=8.5e-21  Score=115.18  Aligned_cols=99  Identities=26%  Similarity=0.387  Sum_probs=71.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CC-------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LP-------------------------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~-------------------------   54 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...........+..... .+                         
T Consensus       206 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  284 (355)
T 2eu9_A          206 RPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSS  284 (355)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSH
T ss_pred             cCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccc
Confidence            5899886554 89999999999999999999999987654333222111000 00                         


Q ss_pred             ----------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcccc
Q 033880           55 ----------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERT  100 (109)
Q Consensus        55 ----------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  100 (109)
                                      ......+..+.+|+.+||..+|++||++.++++||||++..+.+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  346 (355)
T 2eu9_A          285 DGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERS  346 (355)
T ss_dssp             HHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHHHHC
T ss_pred             hhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChhhcc
Confidence                            0001113467899999999999999999999999999987665544

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.81  E-value=4.4e-20  Score=111.23  Aligned_cols=94  Identities=23%  Similarity=0.363  Sum_probs=74.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.........+.......  ..+...+..+.+++.+||..+|++
T Consensus       185 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  263 (321)
T 2a2a_A          185 VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRK  263 (321)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTT
T ss_pred             cCcccccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhh
Confidence            5889886544 8999999999999999999999998766555554443332211  112457888999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++||||....
T Consensus       264 Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          264 RLTIQEALRHPWITPVD  280 (321)
T ss_dssp             SCCHHHHHHSTTTSCSS
T ss_pred             CcCHHHHhcCccccCCC
Confidence            99999999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.81  E-value=1.2e-19  Score=107.75  Aligned_cols=91  Identities=26%  Similarity=0.418  Sum_probs=69.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC-CCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-ELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++. . .++.++|+||+|++++++++|..||.+.............. .........+..+.+++.+||..+|++|
T Consensus       193 ~aPE~~~-~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  270 (285)
T 3is5_A          193 MAPEVFK-R-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERR  270 (285)
T ss_dssp             CCHHHHT-T-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTS
T ss_pred             CChHHhc-c-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhC
Confidence            5888874 3 37899999999999999999999998765444433322221 1112223468899999999999999999


Q ss_pred             CcHHHHhcCcccCC
Q 033880           80 PTAVKLLDHPFVKG   93 (109)
Q Consensus        80 ~~~~~~l~~~~~~~   93 (109)
                      |++.++++||||+.
T Consensus       271 ps~~e~l~hp~f~~  284 (285)
T 3is5_A          271 PSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CCHHHHHTSGGGGC
T ss_pred             cCHHHHhcCHHhhc
Confidence            99999999999975

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.81  E-value=6.4e-20  Score=108.53  Aligned_cols=91  Identities=27%  Similarity=0.408  Sum_probs=69.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+...++.++|+||+|++++++++|..++........   +.. ...+..+...+..+.+++.+||..+|++||
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  272 (289)
T 1x8b_A          197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---IRQ-GRLPRIPQVLSQEFTELLKVMIHPDPERRP  272 (289)
T ss_dssp             CCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH---HHT-TCCCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH---HHc-CCCCCCCcccCHHHHHHHHHHhCCCcccCC
Confidence            5899887654577899999999999999998877654433222   222 233455677899999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      ++.++++|+||....
T Consensus       273 s~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          273 SAMALVKHSVLLSAS  287 (289)
T ss_dssp             CHHHHHTCTTC----
T ss_pred             CHHHHhhChHhhhhc
Confidence            999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.81  E-value=1.5e-20  Score=118.54  Aligned_cols=93  Identities=26%  Similarity=0.395  Sum_probs=75.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+ . ++.++|+||+|+++|++++|..||.+.........+.......  +.+...+..+.+|+.+||..+|.+
T Consensus       195 ~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  272 (484)
T 3nyv_A          195 IAPEVLHG-T-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM  272 (484)
T ss_dssp             CCHHHHHT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGG
T ss_pred             cCceeecC-C-CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhH
Confidence            68998854 3 8999999999999999999999998876665555544433222  223467899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++||||+...
T Consensus       273 R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          273 RISARDALDHEWIQTYT  289 (484)
T ss_dssp             SCCHHHHHTSHHHHHHT
T ss_pred             CcCHHHHhhChhhcccc
Confidence            99999999999998643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.81  E-value=1e-20  Score=119.04  Aligned_cols=93  Identities=28%  Similarity=0.440  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------------------CCC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------------------PTI----   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~----   56 (109)
                      +|||++.+.. ++.++|+||+||++++|++|..||.+.+....+..+......                    +..    
T Consensus       230 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (464)
T 3ttj_A          230 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  308 (464)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCC
T ss_pred             cCHHHHcCCC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCC
Confidence            6899987654 899999999999999999999999886654443332211000                    000    


Q ss_pred             -----CCC-----------CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           57 -----PDD-----------LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        57 -----~~~-----------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                           +..           .+..+.+|+.+||..+|++||+++++++||||+..
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          309 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             hHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence                 000           04568899999999999999999999999999853

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.81  E-value=3.4e-20  Score=114.79  Aligned_cols=96  Identities=21%  Similarity=0.384  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---------HHHHHhhCCCCCCC----------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---------AAMFKIGNSKELPT----------------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~----------------   55 (109)
                      +|||++.+...++.++|+||+||++|++++|..||.+....         ..+..+......+.                
T Consensus       202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  281 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  281 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHH
T ss_pred             cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhh
Confidence            68998876555899999999999999999999999654321         11111100000000                


Q ss_pred             --------------------CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 --------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 --------------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                                          .....+..+.+|+.+||..+|.+||+++++++||||.....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          282 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             hhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence                                01112567889999999999999999999999999987543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=5.3e-21  Score=115.45  Aligned_cols=93  Identities=28%  Similarity=0.371  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+........  .+...+..+.+++.+||..+|++
T Consensus       170 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  248 (321)
T 1tki_A          170 YAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKS  248 (321)
T ss_dssp             SCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG
T ss_pred             cCcHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhH
Confidence            5889886544 78999999999999999999999987765555544443332111  12467889999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++||||+..
T Consensus       249 Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          249 RMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCCHHHHHHSHHHHSC
T ss_pred             CcCHHHHhcChhhccC
Confidence            9999999999999865

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.81  E-value=9.9e-20  Score=109.25  Aligned_cols=97  Identities=31%  Similarity=0.546  Sum_probs=72.4

Q ss_pred             CCCcceecC----------CCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 033880            1 MAPEVIKNS----------SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIPDDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~~----------~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   69 (109)
                      +|||++.+.          ..++.++|+||+|++++++++|..||..... ................+...+..+.+++.
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  274 (313)
T 3cek_A          195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLK  274 (313)
T ss_dssp             CCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             CCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHH
Confidence            578877531          2478899999999999999999999976432 22333333333333455667889999999


Q ss_pred             HHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           70 LCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      +||..+|++||++.++++|+||+.....
T Consensus       275 ~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          275 CCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             HHccCCcccCcCHHHHhcCccccCCCCc
Confidence            9999999999999999999999875433

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.81  E-value=1.5e-20  Score=115.53  Aligned_cols=93  Identities=24%  Similarity=0.377  Sum_probs=74.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.... ++.++|+||+|+++|++++|..||.+.........+......  .......+..+.+|+.+||..+|.+
T Consensus       255 ~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~  333 (373)
T 2x4f_A          255 LAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSW  333 (373)
T ss_dssp             CCHHHHTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred             eChhhccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhh
Confidence            6899886544 889999999999999999999999877655555444333221  1123467899999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++||||...
T Consensus       334 Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          334 RISASEALKHPWLSDH  349 (373)
T ss_dssp             SCCHHHHHHSHHHHCH
T ss_pred             CCCHHHHhcCcCcCCC
Confidence            9999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.81  E-value=9.3e-20  Score=108.89  Aligned_cols=94  Identities=23%  Similarity=0.380  Sum_probs=74.3

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. .++.++|+||+|++++++++|..||.+.........+.....  ..+...+..+.+++.+||..+|++|
T Consensus       178 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~l~~li~~~l~~dp~~R  255 (305)
T 2wtk_C          178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY--AIPGDCGPPLSDLLKGMLEYEPAKR  255 (305)
T ss_dssp             CCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCCSSSCHHHHHHHHHHTCSSTTTS
T ss_pred             cChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC--CCCCccCHHHHHHHHHHccCChhhC
Confidence            5788775432 246799999999999999999999987665544444433322  3466788999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |+++++++|+||+....
T Consensus       256 ps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          256 FSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CCHHHHHHSHHHHSCCC
T ss_pred             CCHHHHhcCcccccCCC
Confidence            99999999999986543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.81  E-value=1.3e-19  Score=109.99  Aligned_cols=96  Identities=33%  Similarity=0.477  Sum_probs=73.7

Q ss_pred             CCCcceecCCCCCc-hHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCCCCCCC-------------------CC
Q 033880            1 MAPEVIKNSSGCNL-AVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKELPTIP-------------------DD   59 (109)
Q Consensus         1 ~apE~~~~~~~~~~-~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~-------------------~~   59 (109)
                      +|||++.+...++. ++|+||+|++++++++|..||..... ......+.....  ..+                   ..
T Consensus       217 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  294 (348)
T 2pml_X          217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI--EYPLDRNHFLYPLTNKKSTCSNNF  294 (348)
T ss_dssp             CCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC--CCCCSSSSSTTTTCC--------C
T ss_pred             cCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc--CCccchhhhhccccccccccchhh
Confidence            58998876534655 99999999999999999999987654 333333332221  122                   45


Q ss_pred             CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        60 ~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                      .+..+.+++.+||..+|.+||++.++++||||.......
T Consensus       295 ~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~  333 (348)
T 2pml_X          295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIED  333 (348)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHH
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHH
Confidence            788999999999999999999999999999999865443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.81  E-value=1e-20  Score=116.01  Aligned_cols=95  Identities=16%  Similarity=0.135  Sum_probs=70.3

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHH---h--hCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA--MFK---I--GNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~--~~~---~--~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++.+. ..++.++|+||+|+++|++++|..||.+......  ...   .  .......+.....+..+.+++.+||
T Consensus       258 ~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  337 (371)
T 3q60_A          258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFL  337 (371)
T ss_dssp             CCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHT
T ss_pred             cChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHc
Confidence            689988641 2489999999999999999999999976532111  000   0  0011111223467899999999999


Q ss_pred             hhCCCCCCcHHHHhcCcccCCCC
Q 033880           73 QRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      ..+|++||++.++++||||+...
T Consensus       338 ~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          338 NFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             CSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             CCChhhCCCHHHHhcCHHHHHHH
Confidence            99999999999999999998653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.81  E-value=5.4e-20  Score=111.46  Aligned_cols=92  Identities=28%  Similarity=0.575  Sum_probs=74.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...........+.....  ..+...+..+.+++.+||..+|++||
T Consensus       208 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp  284 (335)
T 2owb_A          208 IAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARP  284 (335)
T ss_dssp             CCHHHHHTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCHHHhccCC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC--CCCccCCHHHHHHHHHHccCChhHCc
Confidence            5788886554 88999999999999999999999987655544444433322  34567889999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+||....
T Consensus       285 s~~ell~~~~~~~~~  299 (335)
T 2owb_A          285 TINELLNDEFFTSGY  299 (335)
T ss_dssp             CGGGGGGSHHHHTSC
T ss_pred             CHHHHhcCccccCCC
Confidence            999999999998653

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.81  E-value=1.1e-19  Score=109.15  Aligned_cols=88  Identities=31%  Similarity=0.413  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+  .++.++|+||+|++++++++|..++.+......   +......+..+...+..+.+++.+||..+|++||
T Consensus       223 ~aPE~~~~--~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  297 (311)
T 3p1a_A          223 MAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ---LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA  297 (311)
T ss_dssp             CCGGGGGT--CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH---HTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cCHhHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HhccCCCcccccCCCHHHHHHHHHHcCCChhhCc
Confidence            68998864  389999999999999999999766654433222   2222222223456789999999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      +++++++||||+.
T Consensus       298 t~~ell~hp~~~~  310 (311)
T 3p1a_A          298 TAEALLALPVLRQ  310 (311)
T ss_dssp             CHHHHHTSGGGSC
T ss_pred             CHHHHHhCccccC
Confidence            9999999999975

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.81  E-value=7.3e-20  Score=115.58  Aligned_cols=94  Identities=27%  Similarity=0.454  Sum_probs=75.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+ . ++.++|+||+||++|++++|..||.+.........+.......  +.+...+..+.+++.+||..+|++
T Consensus       190 ~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  267 (486)
T 3mwu_A          190 IAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL  267 (486)
T ss_dssp             CCGGGGGS-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTT
T ss_pred             CCHHHhCC-C-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhh
Confidence            68998854 3 8999999999999999999999998876655555444333221  223457899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCC
Q 033880           79 RPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~   96 (109)
                      ||++.++++||||+....
T Consensus       268 R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          268 RITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             SCCHHHHHHCHHHHHTCC
T ss_pred             CcCHHHHhcCHhhccCcc
Confidence            999999999999986543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.81  E-value=1.7e-19  Score=107.66  Aligned_cols=96  Identities=39%  Similarity=0.702  Sum_probs=74.3

Q ss_pred             CCCccee----cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIK----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-PTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~----~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.    ....++.++|+||+|++++++++|..||.................. ...+...+..+.+++.+||..+
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  263 (302)
T 2j7t_A          184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKN  263 (302)
T ss_dssp             CCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSC
T ss_pred             cCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccC
Confidence            5788774    2334788999999999999999999999876655444433322221 1224567889999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      |++||++.++++|+||+....
T Consensus       264 p~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          264 PETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             TTTSCCHHHHTTSTTTTTCCC
T ss_pred             hhhCCCHHHHhcChHHhhhcc
Confidence            999999999999999997654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.81  E-value=2.1e-20  Score=112.21  Aligned_cols=97  Identities=32%  Similarity=0.433  Sum_probs=67.1

Q ss_pred             CCCcceecC----CCCCchHHHHHHHHHHHHHHhCCCCCCCchh---------------HHHHHHhhCCCCCCC--CCCC
Q 033880            1 MAPEVIKNS----SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---------------VAAMFKIGNSKELPT--IPDD   59 (109)
Q Consensus         1 ~apE~~~~~----~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---------------~~~~~~~~~~~~~~~--~~~~   59 (109)
                      +|||++...    ..++.++|+||+|+++|++++|..||.+...               ......+.......+  ....
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  267 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH  267 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTT
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhccc
Confidence            578877531    2367899999999999999999999976421               111122222211111  1135


Q ss_pred             CCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           60 LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        60 ~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      .+..+.+++.+||..+|++||++.++++||||++....
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          268 ISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE  305 (316)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-----
T ss_pred             CCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCc
Confidence            68899999999999999999999999999999976443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=4.5e-20  Score=112.49  Aligned_cols=92  Identities=28%  Similarity=0.439  Sum_probs=71.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.+... .....+......  +..+...+..+.+++.+||..+|++
T Consensus       200 ~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  277 (351)
T 3c0i_A          200 MAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE  277 (351)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             cCHHHHcCCC-CCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhH
Confidence            6899886554 89999999999999999999999987542 222222222211  1112457889999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++|+||+..
T Consensus       278 R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          278 RITVYEALNHPWLKER  293 (351)
T ss_dssp             SCCHHHHHTSHHHHTH
T ss_pred             CcCHHHHhcChhhcCC
Confidence            9999999999999863

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.80  E-value=1.7e-19  Score=113.17  Aligned_cols=97  Identities=26%  Similarity=0.331  Sum_probs=66.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-----------CCCCCCCchh--------------------HHHHHHhh-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-----------TKPPWSQYEG--------------------VAAMFKIG-   48 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-----------g~~p~~~~~~--------------------~~~~~~~~-   48 (109)
                      +|||++.....++.++|+||+||++|+|++           |.++|.+...                    ...+..+. 
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  329 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN  329 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHH
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH
Confidence            689987555559999999999999999998           5666654321                    01110000 


Q ss_pred             ----------------------C-CCC-----CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           49 ----------------------N-SKE-----LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        49 ----------------------~-~~~-----~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                                            . ...     ........+..+.+|+.+||..+|++|++++++++||||+.....
T Consensus       330 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence                                  0 000     001123458899999999999999999999999999999986443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.80  E-value=7.9e-20  Score=113.71  Aligned_cols=94  Identities=30%  Similarity=0.532  Sum_probs=70.1

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH-hhCCCC--CCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSKE--LPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+  ...++.++|+||+|+++|++++|..||........... +.....  .+..+...+..+.+++.+||..+
T Consensus       308 ~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  387 (419)
T 3i6u_A          308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD  387 (419)
T ss_dssp             CCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             cCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCC
Confidence            68998753  23478899999999999999999999976433222222 222211  11123457889999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |++||+++++++||||+..
T Consensus       388 P~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          388 PKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             TTTSCCHHHHHHSGGGCCH
T ss_pred             hhHCcCHHHHhCCcccCCh
Confidence            9999999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=9.8e-21  Score=114.47  Aligned_cols=95  Identities=29%  Similarity=0.517  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--------------------CCCCCC-----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--------------------SKELPT-----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--------------------~~~~~~-----   55 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||.+.........+..                    ....+.     
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (331)
T 4aaa_A          191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKERE  270 (331)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCC
T ss_pred             cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccc
Confidence            5899886654589999999999999999999999987654433322110                    000000     


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                          .....+..+.+|+.+||..+|++||++.++++||||+...
T Consensus       271 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence                0124678899999999999999999999999999998653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.80  E-value=7e-20  Score=111.77  Aligned_cols=95  Identities=26%  Similarity=0.385  Sum_probs=71.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC----------------------CCCCC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS----------------------KELPT---   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~~~---   55 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.+.........+...                      .....   
T Consensus       200 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (362)
T 3pg1_A          200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA  279 (362)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC
T ss_pred             cCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh
Confidence            58998866455899999999999999999999999876543332222110                      00000   


Q ss_pred             -----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           56 -----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        56 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                           .....+..+.+++.+||..+|++||++.++++||||+...
T Consensus       280 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          280 RAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence                 1234578899999999999999999999999999999763

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.80  E-value=3.8e-20  Score=115.01  Aligned_cols=95  Identities=26%  Similarity=0.424  Sum_probs=72.2

Q ss_pred             CCCcceec------CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKN------SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS---KELPTIPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~------~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~   71 (109)
                      ||||++..      ...++.++|+||+||++|+|++|..||.+.+.......+...   ...+..+...+..+++|+.+|
T Consensus       230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~l  309 (412)
T 2vd5_A          230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL  309 (412)
T ss_dssp             CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTT
T ss_pred             CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHH
Confidence            68898862      234889999999999999999999999877655554444321   122233457899999999999


Q ss_pred             hhhCCCCC---CcHHHHhcCcccCCCCC
Q 033880           72 LQRNPLNR---PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        72 l~~~p~~R---~~~~~~l~~~~~~~~~~   96 (109)
                      |. +|.+|   ++++++++||||++...
T Consensus       310 L~-~p~~Rlgr~~~~ei~~Hpff~~i~w  336 (412)
T 2vd5_A          310 LC-PPETRLGRGGAGDFRTHPFFFGLDW  336 (412)
T ss_dssp             SS-CGGGCTTTTTHHHHHTSGGGTTCCS
T ss_pred             cC-ChhhcCCCCCHHHHhcCCCcCCCCH
Confidence            99 89988   58999999999988643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.80  E-value=9e-20  Score=108.72  Aligned_cols=96  Identities=33%  Similarity=0.615  Sum_probs=69.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--------CCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--------PTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++.....++.++|+||+|++++++++|..||..................        .......+..+.+++.+||
T Consensus       193 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  272 (303)
T 2vwi_A          193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL  272 (303)
T ss_dssp             CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHC
T ss_pred             cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHc
Confidence            57887754334789999999999999999999999876544433322221111        1123456788999999999


Q ss_pred             hhCCCCCCcHHHHhcCcccCCCCC
Q 033880           73 QRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      ..+|++||++.++++|+||+....
T Consensus       273 ~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          273 QKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             CSSGGGSCCHHHHHTSTTC-----
T ss_pred             cCChhhCcCHHHHhhChhhhcCCC
Confidence            999999999999999999986543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.80  E-value=1.1e-19  Score=115.02  Aligned_cols=91  Identities=26%  Similarity=0.463  Sum_probs=73.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++. . .++.++|+||+||++|++++|..||.+.........+.......  +.+...+..+.+++.+||..+|.+
T Consensus       205 ~aPE~l~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  282 (494)
T 3lij_A          205 IAPEVLR-K-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQR  282 (494)
T ss_dssp             CCHHHHT-T-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTT
T ss_pred             eCHHHHc-c-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhh
Confidence            6899874 3 38899999999999999999999998876655554444333221  223467899999999999999999


Q ss_pred             CCcHHHHhcCcccCC
Q 033880           79 RPTAVKLLDHPFVKG   93 (109)
Q Consensus        79 R~~~~~~l~~~~~~~   93 (109)
                      ||++.++++||||+.
T Consensus       283 R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          283 RISAQQALEHPWIKE  297 (494)
T ss_dssp             SCCHHHHHTCHHHHH
T ss_pred             CccHHHHhcCccccc
Confidence            999999999999975

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.80  E-value=1.8e-19  Score=109.29  Aligned_cols=87  Identities=26%  Similarity=0.376  Sum_probs=70.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||......      ....  ...+...+..+.+++.+||..+|++||
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rp  267 (335)
T 3dls_A          196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEAA--IHPPYLVSKELMSLVSGLLQPVPERRT  267 (335)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhhc--cCCCcccCHHHHHHHHHHccCChhhCc
Confidence            68998876654588999999999999999999999764321      1111  123556789999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++||||+...
T Consensus       268 s~~ell~hp~~~~~~  282 (335)
T 3dls_A          268 TLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CHHHHHHCTTTTCCC
T ss_pred             CHHHHhcCccccCCc
Confidence            999999999998643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.80  E-value=9.7e-20  Score=108.31  Aligned_cols=98  Identities=45%  Similarity=0.752  Sum_probs=71.1

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+. ..++.++|+||+|++++++++|..||....... ...........+..+...+..+.+++.+||..+|++
T Consensus       190 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhh
Confidence            578877543 237889999999999999999999996543222 222211122233456778999999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCcc
Q 033880           79 RPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~~   98 (109)
                      ||++.++++|+||+......
T Consensus       270 Rps~~~ll~~~~~~~~~~~~  289 (295)
T 2clq_A          270 RACANDLLVDEFLKVSSKKK  289 (295)
T ss_dssp             SCCHHHHHTSGGGCC-----
T ss_pred             CCCHHHHhcChhhhhccccC
Confidence            99999999999998765433

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.80  E-value=1.2e-19  Score=111.12  Aligned_cols=92  Identities=32%  Similarity=0.470  Sum_probs=70.4

Q ss_pred             CCCcceecC-----CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNS-----SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~-----~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++.+.     ..++.++|+||+|+++|++++|..||.+.........+........  .+...+..+.+++.+||.
T Consensus       266 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  345 (365)
T 2y7j_A          266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQ  345 (365)
T ss_dssp             CCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSC
T ss_pred             cChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcC
Confidence            578877532     2378899999999999999999999987654444433333222111  124567889999999999


Q ss_pred             hCCCCCCcHHHHhcCcccC
Q 033880           74 RNPLNRPTAVKLLDHPFVK   92 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~   92 (109)
                      .+|++||++.++++||||+
T Consensus       346 ~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          346 VDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             SSTTTSCCHHHHHHSGGGC
T ss_pred             CChhHCcCHHHHhcCcccC
Confidence            9999999999999999996

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.80  E-value=1.8e-19  Score=109.94  Aligned_cols=93  Identities=29%  Similarity=0.475  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH----------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK----------------------------------   46 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~----------------------------------   46 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........                                  
T Consensus       197 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (360)
T 3eqc_A          197 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPM  275 (360)
T ss_dssp             CCHHHHTTCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CC
T ss_pred             ECHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcc
Confidence            5899886654 89999999999999999999999976443221111                                  


Q ss_pred             --------hhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           47 --------IGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        47 --------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                              ..............+..+.+|+.+||..+|++||+++++++||||+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          276 AIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             CHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                    011111111123467889999999999999999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.80  E-value=1.7e-19  Score=106.56  Aligned_cols=93  Identities=30%  Similarity=0.545  Sum_probs=74.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+... ..+..+...+..+.+++.+||..+|++||
T Consensus       183 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  260 (279)
T 2w5a_A          183 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPYRYSDELNEIITRMLNLKDYHRP  260 (279)
T ss_dssp             CCHHHHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-ccccCCcccCHHHHHHHHHHcCCCcccCC
Confidence            5889886554 889999999999999999999999876554443333333 22345667889999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+|+....
T Consensus       261 s~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          261 SVEEILENPLILEHH  275 (279)
T ss_dssp             CHHHHHTSTTCCGGG
T ss_pred             CHHHHHhChhhhhhc
Confidence            999999999998654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.80  E-value=2e-19  Score=107.12  Aligned_cols=96  Identities=30%  Similarity=0.431  Sum_probs=72.5

Q ss_pred             CCCccee-----cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIK-----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~-----~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++.     ....++.++|+||+|++++++++|..||...........+.......  ......+..+.+++.+||.
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  269 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV  269 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred             cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHcc
Confidence            4788764     12347889999999999999999999997765544443333322211  1224578899999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .+|++||++.++++|+||+....
T Consensus       270 ~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          270 VQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             SSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             CCcccCCCHHHHHhChHhhhccc
Confidence            99999999999999999987644

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.80  E-value=1.7e-19  Score=108.12  Aligned_cols=94  Identities=44%  Similarity=0.722  Sum_probs=73.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||................. ....+...+..+.+++.+||..+|.+|
T Consensus       192 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  270 (314)
T 3com_A          192 MAPEVIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR  270 (314)
T ss_dssp             CCHHHHSSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTS
T ss_pred             cChhhcCCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhC
Confidence            5788886554 88999999999999999999999987655444333322211 112244568899999999999999999


Q ss_pred             CcHHHHhcCcccCCCC
Q 033880           80 PTAVKLLDHPFVKGAA   95 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~   95 (109)
                      |++.++++|+||+...
T Consensus       271 pt~~~ll~~~~~~~~~  286 (314)
T 3com_A          271 ATATQLLQHPFVRSAK  286 (314)
T ss_dssp             CCHHHHTTSHHHHTCC
T ss_pred             cCHHHHHhCHHHhcCC
Confidence            9999999999998754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.79  E-value=5e-20  Score=111.16  Aligned_cols=93  Identities=25%  Similarity=0.331  Sum_probs=67.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-C--------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-L--------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~--------------------------   53 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||...........+..... .                          
T Consensus       201 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  279 (339)
T 1z57_A          201 RAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSS  279 (339)
T ss_dssp             CCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSH
T ss_pred             cChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccccc
Confidence            5899886554 89999999999999999999999986544332221110000 0                          


Q ss_pred             ---------------CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           54 ---------------PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        54 ---------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                                     .......+..+.+++.+||..+|.+||++.++++||||+..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             ccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                           00011224568899999999999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.79  E-value=4.7e-20  Score=112.73  Aligned_cols=97  Identities=30%  Similarity=0.460  Sum_probs=66.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH------HHHHHhhC-CCCC--------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV------AAMFKIGN-SKEL--------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~------~~~~~~~~-~~~~--------------------   53 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||......      .....+.. ....                    
T Consensus       202 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  280 (373)
T 1q8y_A          202 RSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL  280 (373)
T ss_dssp             CCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred             cCcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcch
Confidence            6899887655 899999999999999999999999754311      11111100 0000                    


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           54 -------------------PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        54 -------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                                         ...+...+..+.+|+.+||..+|++||++.++++||||+.....+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             hcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence                               011222346778999999999999999999999999999764433

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.79  E-value=5.2e-19  Score=109.11  Aligned_cols=93  Identities=26%  Similarity=0.469  Sum_probs=72.2

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++..  ...++.++|+||+||++|++++|..||.....   ......+...  ....+...+..+.+++.+||..+
T Consensus       181 ~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~p~~~s~~~~~li~~lL~~d  258 (384)
T 4fr4_A          181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT--VVTYPSAWSQEMVSLLKKLLEPN  258 (384)
T ss_dssp             CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSS
T ss_pred             cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--ccCCCCcCCHHHHHHHHHHhcCC
Confidence            68998863  23488999999999999999999999974322   1222222222  22456778999999999999999


Q ss_pred             CCCCCc-HHHHhcCcccCCCC
Q 033880           76 PLNRPT-AVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~-~~~~l~~~~~~~~~   95 (109)
                      |.+|++ ++++++|+||.+..
T Consensus       259 P~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          259 PDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             GGGSCCSHHHHHTSGGGTTCC
T ss_pred             HhHhcccHHHHHcChhhhcCC
Confidence            999998 89999999998763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.79  E-value=8.7e-19  Score=109.40  Aligned_cols=97  Identities=27%  Similarity=0.377  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-----------CCCCCCchh-----------------HHHHHH------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-----------KPPWSQYEG-----------------VAAMFK------   46 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-----------~~p~~~~~~-----------------~~~~~~------   46 (109)
                      +|||++.....++.++|+||+||+++++++|           .++|.+...                 ...+..      
T Consensus       218 ~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g  297 (432)
T 3n9x_A          218 RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIG  297 (432)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHC
T ss_pred             cCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcC
Confidence            5899865555599999999999999999974           333433210                 011100      


Q ss_pred             ------------------hhCCCCCCC-----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           47 ------------------IGNSKELPT-----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        47 ------------------~~~~~~~~~-----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                                        +........     .....+..+.+|+.+||..+|++||+++++++||||+.....
T Consensus       298 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~  371 (432)
T 3n9x_A          298 TPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK  371 (432)
T ss_dssp             SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred             CCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCc
Confidence                              000000000     013578899999999999999999999999999999986443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=1.7e-20  Score=115.25  Aligned_cols=90  Identities=12%  Similarity=0.163  Sum_probs=68.0

Q ss_pred             CCCcceecC----------CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Q 033880            1 MAPEVIKNS----------SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRL   70 (109)
Q Consensus         1 ~apE~~~~~----------~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   70 (109)
                      +|||++.+.          ..++.++|+||+|+++|++++|..||.+.........+.      ......+..+.+++.+
T Consensus       269 ~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~  342 (377)
T 3byv_A          269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF------RSCKNIPQPVRALLEG  342 (377)
T ss_dssp             CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG------SSCCCCCHHHHHHHHH
T ss_pred             cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh------hhccCCCHHHHHHHHH
Confidence            588888655          138999999999999999999999997654322221111      1235678999999999


Q ss_pred             HhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           71 CLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        71 ~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      ||..+|++||++.++++|+||+....
T Consensus       343 ~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          343 FLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             HTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             HcCCCchhCCCHHHHhhChHHHHHHH
Confidence            99999999999999999999986543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.79  E-value=1.2e-19  Score=108.37  Aligned_cols=94  Identities=41%  Similarity=0.703  Sum_probs=75.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||...........+... ..+..+...+..+.+++.+||..+|++||
T Consensus       186 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  263 (303)
T 3a7i_A          186 MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPSFRP  263 (303)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-CCCCCCSSCCHHHHHHHHHHCCSSGGGSC
T ss_pred             cCHHHHhcCC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC-CCCCCccccCHHHHHHHHHHcCCChhhCc
Confidence            5788886544 889999999999999999999999876554444333222 23345667889999999999999999999


Q ss_pred             cHHHHhcCcccCCCCC
Q 033880           81 TAVKLLDHPFVKGAAP   96 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~~   96 (109)
                      ++.++++|+||.....
T Consensus       264 s~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          264 TAKELLKHKFILRNAK  279 (303)
T ss_dssp             CHHHHTTCHHHHHHCC
T ss_pred             CHHHHhhChhhhcCCC
Confidence            9999999999976543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.79  E-value=1.6e-19  Score=106.65  Aligned_cols=92  Identities=23%  Similarity=0.360  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+ . ++.++|+||+|++++++++|..||...........+.......+  .....+..+.+++.+||..+|++
T Consensus       175 ~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  252 (277)
T 3f3z_A          175 VSPQVLEG-L-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQ  252 (277)
T ss_dssp             CCHHHHTT-C-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             cChHHhcc-c-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhh
Confidence            57887743 3 88999999999999999999999987665555444443322111  11257889999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++|+||+..
T Consensus       253 R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          253 RITSLQALEHEWFEKQ  268 (277)
T ss_dssp             SCCHHHHTTSHHHHHH
T ss_pred             CcCHHHHhcCHHHhcc
Confidence            9999999999999753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.79  E-value=2e-19  Score=108.48  Aligned_cols=94  Identities=32%  Similarity=0.596  Sum_probs=61.1

Q ss_pred             CCCccee---cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCC----CCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIK---NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI----PDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~---~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~   73 (109)
                      +|||++.   ....++.++|+||+|++++++++|..||..................+..    ....+..+.+++.+||.
T Consensus       192 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  271 (327)
T 3aln_A          192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLT  271 (327)
T ss_dssp             --------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTC
T ss_pred             cCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhh
Confidence            5899873   2234889999999999999999999999764432222111111111111    23578899999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      .+|++||++.++++||||...
T Consensus       272 ~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          272 KDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             SSGGGSCCHHHHTTSHHHHHH
T ss_pred             CChhhCcCHHHHHhChHHHHh
Confidence            999999999999999999753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=2.1e-19  Score=107.78  Aligned_cols=94  Identities=30%  Similarity=0.531  Sum_probs=68.6

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++..    ...++.++|+||+|++++++++|..||..... ............ ..+.....+..+.+++.+||..
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  270 (318)
T 2dyl_A          191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTK  270 (318)
T ss_dssp             CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCS
T ss_pred             cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccC
Confidence            57888742    23478899999999999999999999976432 222222222211 1112345789999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~   94 (109)
                      +|.+||+++++++|+||+..
T Consensus       271 dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          271 DHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             CTTTSCCHHHHTTSHHHHHH
T ss_pred             ChhHCcCHHHHhhCHHHHhc
Confidence            99999999999999999754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.79  E-value=2.9e-20  Score=114.35  Aligned_cols=92  Identities=28%  Similarity=0.381  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh------HHHHHHhhC--CCC--------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG------VAAMFKIGN--SKE--------------------   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~------~~~~~~~~~--~~~--------------------   52 (109)
                      +|||++.+.. ++.++|+||+||++|++++|..||.....      ......+..  ...                    
T Consensus       260 ~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  338 (397)
T 1wak_A          260 RSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD  338 (397)
T ss_dssp             CCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred             cCChhhcCCC-CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence            6899887655 89999999999999999999999965321      111111100  000                    


Q ss_pred             CC------------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           53 LP------------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        53 ~~------------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                      ..                  ..+...+..+.+|+.+||..+|++||++.++++||||+.
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            00                  001112356789999999999999999999999999963

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=1.9e-19  Score=115.59  Aligned_cols=92  Identities=26%  Similarity=0.487  Sum_probs=72.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHH-HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+...   .... ..+...  ...++...+..+.+|+.+||..+|
T Consensus       352 ~APEvl~~~~-~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP  428 (576)
T 2acx_A          352 MAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDP  428 (576)
T ss_dssp             CCHHHHTTCE-ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCH
Confidence            6899886654 89999999999999999999999976432   1122 222222  224467789999999999999999


Q ss_pred             CCCC-----cHHHHhcCcccCCCC
Q 033880           77 LNRP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        77 ~~R~-----~~~~~l~~~~~~~~~   95 (109)
                      ++|+     +++++++||||+...
T Consensus       429 ~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          429 AERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             GGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             HHcCCCCCCCHHHHHhChhhccCC
Confidence            9999     789999999999753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.79  E-value=1.4e-19  Score=114.81  Aligned_cols=93  Identities=29%  Similarity=0.398  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++. . .++.++|+||+|+++|++++|..||.+.........+........  .+...+..+.+++.+||..+|.+
T Consensus       215 ~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  292 (504)
T 3q5i_A          215 IAPEVLK-K-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK  292 (504)
T ss_dssp             CCHHHHT-T-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             CCHHHhc-c-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhH
Confidence            5899875 3 388999999999999999999999988766655555444332211  12567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||+++++++||||+...
T Consensus       293 R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          293 RCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             SCCHHHHHTSHHHHHTC
T ss_pred             CCCHHHHhcCHhhhhch
Confidence            99999999999998654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=1.1e-19  Score=107.88  Aligned_cols=93  Identities=27%  Similarity=0.457  Sum_probs=72.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+ . ++.++|+||+|++++++++|..||.+.........+........  .....+..+.+++.+||..+|++
T Consensus       190 ~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  267 (287)
T 2wei_A          190 IAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL  267 (287)
T ss_dssp             CCHHHHTT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cChHHhcC-C-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhh
Confidence            57887743 3 88999999999999999999999987665544444333322111  12457889999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||++.++++||||+...
T Consensus       268 Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          268 RITATQCLEHPWIQKYS  284 (287)
T ss_dssp             SCCHHHHHHSHHHHHHC
T ss_pred             CcCHHHHhcCHHHhccc
Confidence            99999999999997543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.79  E-value=2.6e-19  Score=114.43  Aligned_cols=92  Identities=28%  Similarity=0.468  Sum_probs=72.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh----HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG----VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+...    ......+....  ...+..++..+.+++.+||..+|
T Consensus       356 ~APE~l~~~~-~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~lL~~dP  432 (543)
T 3c4z_A          356 MAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCEALLQKDP  432 (543)
T ss_dssp             SCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             cChhhhcCCC-CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc--cCCCcccCHHHHHHHHHhccCCH
Confidence            6899987654 89999999999999999999999976421    22222222222  24567789999999999999999


Q ss_pred             CCCCc-----HHHHhcCcccCCCC
Q 033880           77 LNRPT-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        77 ~~R~~-----~~~~l~~~~~~~~~   95 (109)
                      ++|++     ++++++||||+...
T Consensus       433 ~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          433 EKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             GGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             hHCCCCcccCHHHHHcCccccCCC
Confidence            99995     58999999999753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.79  E-value=8.2e-20  Score=109.54  Aligned_cols=97  Identities=27%  Similarity=0.420  Sum_probs=72.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-----------------------CC---
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-----------------------LP---   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------~~---   54 (109)
                      +|||.+.....++.++|+||+|++++++++|..||.+.........+.....                       .+   
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (320)
T 2i6l_A          191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKP  270 (320)
T ss_dssp             CCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCC
T ss_pred             cCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCC
Confidence            5788776544589999999999999999999999987654433322211100                       00   


Q ss_pred             --CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           55 --TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        55 --~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                        ......+..+.+++.+||..+|++||+++++++||||+.....
T Consensus       271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          271 LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence              0124578899999999999999999999999999999865443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.79  E-value=3.6e-20  Score=113.62  Aligned_cols=93  Identities=25%  Similarity=0.370  Sum_probs=69.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--------------------CC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--------------------TI----   56 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~----   56 (109)
                      +|||++.+.. ++.++|+||+||+++++++|..||.+.+.......+......+                    ..    
T Consensus       193 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (371)
T 2xrw_A          193 RAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS  271 (371)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCC
T ss_pred             cCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccc
Confidence            6899887654 8999999999999999999999998766554444332221110                    00    


Q ss_pred             ----------CC------CCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           57 ----------PD------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        57 ----------~~------~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                                +.      ..+..+.+|+.+||..+|++||+++++++||||+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          272 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             hhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                      00      014568899999999999999999999999999753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.78  E-value=2.5e-19  Score=108.11  Aligned_cols=95  Identities=23%  Similarity=0.403  Sum_probs=68.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-hHHHHHHh-------------hCCCC--------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKI-------------GNSKE--------------   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~~-------------~~~~~--------------   52 (109)
                      +|||++.+...++.++|+||+|++++++++|..||.... .......+             .....              
T Consensus       197 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (330)
T 3nsz_A          197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS  276 (330)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCC
T ss_pred             cChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhcc
Confidence            588988664558999999999999999999999984321 11111110             00000              


Q ss_pred             --------CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           53 --------LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        53 --------~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                              ....+...+..+.+|+.+||..+|++||+++++++||||+...
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          277 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                    0011223688999999999999999999999999999999764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.78  E-value=2.9e-19  Score=107.68  Aligned_cols=87  Identities=25%  Similarity=0.471  Sum_probs=70.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+...++.++|+||+|+++|++++|..||......      ....  ...+...+..+.+++.+||..+|++||
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp  286 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRGQ--VFFRQRVSSECQHLIRWCLALRPSDRP  286 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHCC--CCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------hccc--ccccccCCHHHHHHHHHHccCChhhCc
Confidence            58898866554578899999999999999999999764321      1111  123566789999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+||+...
T Consensus       287 s~~~ll~hp~~~~~~  301 (320)
T 3a99_A          287 TFEEIQNHPWMQDVL  301 (320)
T ss_dssp             CHHHHHTSGGGSSCC
T ss_pred             CHHHHhcCHhhcCcc
Confidence            999999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.78  E-value=1e-19  Score=110.38  Aligned_cols=94  Identities=27%  Similarity=0.461  Sum_probs=60.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH----hh--CCCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK----IG--NSKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.... ++.++|+||+|+++|++++|..||...........    +.  ............+..+.+++.+||..
T Consensus       196 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  274 (336)
T 3fhr_A          196 VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKT  274 (336)
T ss_dssp             --------CH-HHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCS
T ss_pred             cChhhhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCC
Confidence            5899885544 88899999999999999999999976543222111    11  11111122356789999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      +|.+||+++++++||||+...
T Consensus       275 dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          275 DPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             SGGGSCCHHHHHHSHHHHTGG
T ss_pred             ChhHCcCHHHHhcCccccccc
Confidence            999999999999999998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.78  E-value=3.2e-19  Score=107.48  Aligned_cols=94  Identities=30%  Similarity=0.526  Sum_probs=69.5

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH-hhCCC--CCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSK--ELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.  ....++.++|+||+|+++|++++|..||........... +....  ..+..+...+..+.+++.+||..+
T Consensus       183 ~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  262 (322)
T 2ycf_A          183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD  262 (322)
T ss_dssp             CCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             cCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccC
Confidence            5889874  233488999999999999999999999976433222211 11111  111123457889999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |++||++.++++|+||+..
T Consensus       263 P~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          263 PKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             TTTSCCHHHHHTSGGGCCH
T ss_pred             HhhCCCHHHHhhCcCcCCH
Confidence            9999999999999999763

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.78  E-value=1.5e-19  Score=107.03  Aligned_cols=93  Identities=25%  Similarity=0.406  Sum_probs=73.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+.........+.......  ......+..+.+++.+||..+|++
T Consensus       178 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  256 (283)
T 3bhy_A          178 VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKR  256 (283)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGG
T ss_pred             cCcceecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhH
Confidence            5889886544 8899999999999999999999998766555444443332211  112456888999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||++.++++|+||+..
T Consensus       257 Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          257 RMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             SCCHHHHHHCHHHHHH
T ss_pred             CcCHHHHHhCHHHHHH
Confidence            9999999999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.77  E-value=8e-19  Score=109.64  Aligned_cols=93  Identities=23%  Similarity=0.389  Sum_probs=66.2

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+  ...++.++|+||+||+++++++ |..||............ .......  .....+..+.+++.+||..+
T Consensus       193 ~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~d  271 (432)
T 3p23_A          193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-GACSLDCLHPEKHEDVIARELIEKMIAMD  271 (432)
T ss_dssp             CCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHT-TCCCCTTSCTTCHHHHHHHHHHHHHSCSS
T ss_pred             cChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHh-ccCCccccCccccccHHHHHHHHHHHhCC
Confidence            68998864  2346789999999999999999 88898654333222221 1111111  11223455789999999999


Q ss_pred             CCCCCcHHHHhcCcccCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~   94 (109)
                      |.+||++.++++||||...
T Consensus       272 P~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          272 PQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             GGGSCCHHHHHTSTTTCCH
T ss_pred             HhhCCCHHHHHhCccccCh
Confidence            9999999999999999763

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=1.1e-18  Score=104.82  Aligned_cols=92  Identities=28%  Similarity=0.582  Sum_probs=72.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+...................+...+..+.+++.+||..+|.+||
T Consensus       206 ~aPE~~~~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  284 (309)
T 3p86_A          206 MAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRP  284 (309)
T ss_dssp             SCHHHHTTCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCc
Confidence            5899886655 889999999999999999999999877655554444333333455778899999999999999999999


Q ss_pred             cHHHHhc--CcccCC
Q 033880           81 TAVKLLD--HPFVKG   93 (109)
Q Consensus        81 ~~~~~l~--~~~~~~   93 (109)
                      ++.++++  ..++..
T Consensus       285 s~~~ll~~L~~~~~~  299 (309)
T 3p86_A          285 SFATIMDLLRPLIKS  299 (309)
T ss_dssp             CHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHh
Confidence            9999986  444443

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.77  E-value=8.4e-19  Score=103.25  Aligned_cols=87  Identities=29%  Similarity=0.543  Sum_probs=71.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+...................+...+..+.+++.+||..+|++||
T Consensus       181 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  259 (271)
T 3dtc_A          181 MAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRP  259 (271)
T ss_dssp             SCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             eCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCc
Confidence            5788886654 899999999999999999999999877655555555444444455677899999999999999999999


Q ss_pred             cHHHHhcC
Q 033880           81 TAVKLLDH   88 (109)
Q Consensus        81 ~~~~~l~~   88 (109)
                      ++.+++++
T Consensus       260 s~~e~l~~  267 (271)
T 3dtc_A          260 SFTNILDQ  267 (271)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=104.59  Aligned_cols=87  Identities=25%  Similarity=0.503  Sum_probs=68.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+....+.++|+||+|++++++++|..||......   .   ...  ...+...+..+.+++.+||..+|++||
T Consensus       205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~---~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp  276 (312)
T 2iwi_A          205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI---L---EAE--LHFPAHVSPDCCALIRRCLAPKPSSRP  276 (312)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH---H---HTC--CCCCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH---h---hhc--cCCcccCCHHHHHHHHHHccCChhhCc
Confidence            57888765553456899999999999999999999764321   1   111  134567789999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++++++|+||+...
T Consensus       277 s~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          277 SLEEILLDPWMQTPA  291 (312)
T ss_dssp             CHHHHHHSTTTCC--
T ss_pred             CHHHHhcChhhcCch
Confidence            999999999998753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.76  E-value=2.6e-18  Score=107.31  Aligned_cols=93  Identities=28%  Similarity=0.487  Sum_probs=66.9

Q ss_pred             CCCcceec------CCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCC----CCCCHHHHHHHH
Q 033880            1 MAPEVIKN------SSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIP----DDLSDEGKDFIR   69 (109)
Q Consensus         1 ~apE~~~~------~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~   69 (109)
                      +|||++.+      ...++.++|+||+||++|++++ |..||.......... .......+...    ...+..+.+++.
T Consensus       199 ~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~li~  277 (434)
T 2rio_A          199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI-IRGIFSLDEMKCLHDRSLIAEATDLIS  277 (434)
T ss_dssp             SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH-HHTCCCCCCCTTCCCHHHHHHHHHHHH
T ss_pred             cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH-hcCCCCcccccccccccchHHHHHHHH
Confidence            68898854      1348899999999999999999 899997543322211 11111111111    123467899999


Q ss_pred             HHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           70 LCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        70 ~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      +||..+|++||++.++++||||...
T Consensus       278 ~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          278 QMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             HHhhCChhhCCCHHHHHhCCccCCc
Confidence            9999999999999999999999753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.76  E-value=1.2e-18  Score=103.69  Aligned_cols=91  Identities=29%  Similarity=0.417  Sum_probs=66.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGNSK--ELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+...++.++|+||+|+++|++++   ||..... ......+....  ..+..+...+..+.+++.+||..+|+
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  273 (303)
T 1zy4_A          197 VATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPN  273 (303)
T ss_dssp             SCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGG
T ss_pred             cCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcc
Confidence            578888655458899999999999999998   4543322 22222222211  12233455677899999999999999


Q ss_pred             CCCcHHHHhcCcccCCC
Q 033880           78 NRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        78 ~R~~~~~~l~~~~~~~~   94 (109)
                      +||++.++++||||...
T Consensus       274 ~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          274 KRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             GSCCHHHHHHSSCSCCC
T ss_pred             cCcCHHHHhCCCCcCCC
Confidence            99999999999999865

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.76  E-value=1.6e-18  Score=101.82  Aligned_cols=87  Identities=22%  Similarity=0.497  Sum_probs=69.8

Q ss_pred             CCCcceecCC--CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~--~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+..  .++.++|+||+|+++|++++|..||.+................+..+...+..+.+++.+||..+|++
T Consensus       175 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  254 (271)
T 3kmu_A          175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAK  254 (271)
T ss_dssp             SCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence            5889886533  23448999999999999999999998776655555554444445567788999999999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||+++++++
T Consensus       255 Rps~~~il~  263 (271)
T 3kmu_A          255 RPKFDMIVP  263 (271)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=3.2e-18  Score=104.53  Aligned_cols=93  Identities=32%  Similarity=0.537  Sum_probs=69.9

Q ss_pred             CCCcceecC-CCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHH-HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~-~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+. ..++.++|+||+|+++|++++|..||.....   .... ......  .+..+...+..+.+++.+||..+
T Consensus       227 ~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~d  304 (355)
T 1vzo_A          227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMSALAKDLIQRLLMKD  304 (355)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc--CCCCCcccCHHHHHHHHHHhhhC
Confidence            588988642 3478899999999999999999999964321   1111 112111  23456778899999999999999


Q ss_pred             CCCCC-----cHHHHhcCcccCCCC
Q 033880           76 PLNRP-----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~-----~~~~~l~~~~~~~~~   95 (109)
                      |.+||     +++++++|+||....
T Consensus       305 P~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          305 PKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             GGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHhcCCCCCCHHHHHcCcchhcCC
Confidence            99999     999999999998753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.76  E-value=2.9e-19  Score=111.03  Aligned_cols=88  Identities=14%  Similarity=0.181  Sum_probs=68.6

Q ss_pred             CCCccee---------cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIK---------NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~---------~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   71 (109)
                      ||||++.         ....++.++|+||+||++|++++|..||.............      ......+..+.+++.+|
T Consensus       274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~  347 (413)
T 3dzo_A          274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGF  347 (413)
T ss_dssp             CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG------SSCCCCCHHHHHHHHHH
T ss_pred             eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH------hhcccCCHHHHHHHHHH
Confidence            6889873         22237789999999999999999999997654332222211      11235679999999999


Q ss_pred             hhhCCCCCCcHHHHhcCcccCCC
Q 033880           72 LQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      |..+|++||++.++++|+||+..
T Consensus       348 l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          348 LRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ccCChhhCcCHHHHHhCHHHHHH
Confidence            99999999999999999999754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.75  E-value=3.8e-19  Score=107.12  Aligned_cols=89  Identities=21%  Similarity=0.369  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..++...  .......... ..+......+....+++.+||..+|++||
T Consensus       243 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  318 (332)
T 3qd2_B          243 MSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVRNL-KFPLLFTQKYPQEHMMVQDMLSPSPTERP  318 (332)
T ss_dssp             SCHHHHHCCC-CCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHHTT-CCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred             cChHHhcCCC-CcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhhcc-CCCcccccCChhHHHHHHHHccCCCCcCC
Confidence            5889886654 899999999999999999986654221  1111122222 22222233457789999999999999999


Q ss_pred             cHHHHhcCcccCC
Q 033880           81 TAVKLLDHPFVKG   93 (109)
Q Consensus        81 ~~~~~l~~~~~~~   93 (109)
                      +++++++|+||+.
T Consensus       319 s~~~~l~~~~f~~  331 (332)
T 3qd2_B          319 EATDIIENAIFEN  331 (332)
T ss_dssp             CHHHHHHSTTCCC
T ss_pred             CHHHHhhchhhhc
Confidence            9999999999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.75  E-value=2.4e-18  Score=103.55  Aligned_cols=92  Identities=22%  Similarity=0.395  Sum_probs=69.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       206 ~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  283 (323)
T 3qup_A          206 LALESLADNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQR  283 (323)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             cCchhhcCCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhC
Confidence            5788886655 8999999999999999999 899998766555554444333 234467788999999999999999999


Q ss_pred             Cc-------HHHHhcCcccCCC
Q 033880           80 PT-------AVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~-------~~~~l~~~~~~~~   94 (109)
                      |+       +++++.|+|+...
T Consensus       284 ps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          284 PSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCHHHHHHHHHHHHHC------
T ss_pred             cCHHHHHHHHHHHHHHhhhcCC
Confidence            99       6667889998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.75  E-value=9.3e-19  Score=106.63  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=69.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+...................+...+..+.+++.+||..+|++|
T Consensus       262 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  340 (359)
T 3vhe_A          262 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  340 (359)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             EChhhhcCCC-CCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            6899887655 8999999999999999998 9999987654444333333333334567788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++|
T Consensus       341 ps~~ell~~  349 (359)
T 3vhe_A          341 PTFSELVEH  349 (359)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.74  E-value=2.3e-18  Score=105.58  Aligned_cols=89  Identities=18%  Similarity=0.295  Sum_probs=72.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+||+++++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       253 ~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R  330 (367)
T 3l9p_A          253 MPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDR  330 (367)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ECHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCCHhHC
Confidence            5899886655 8999999999999999998 999998776555554444433 234466788999999999999999999


Q ss_pred             CcHHHHhcCccc
Q 033880           80 PTAVKLLDHPFV   91 (109)
Q Consensus        80 ~~~~~~l~~~~~   91 (109)
                      |++.+++++.++
T Consensus       331 ps~~eil~~l~~  342 (367)
T 3l9p_A          331 PNFAIILERIEY  342 (367)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            999999987554

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=2.1e-18  Score=104.63  Aligned_cols=87  Identities=21%  Similarity=0.286  Sum_probs=69.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+................+..+...+..+.+++.+||..+|.+|
T Consensus       241 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  319 (344)
T 1rjb_A          241 MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKR  319 (344)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhccCC-CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            5889886655 8999999999999999998 9999987654444444333333344567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       320 ps~~~l~~~  328 (344)
T 1rjb_A          320 PSFPNLTSF  328 (344)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.73  E-value=6.9e-18  Score=103.59  Aligned_cols=86  Identities=23%  Similarity=0.373  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..+..++..+.+++.+||..+|++|
T Consensus       272 ~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~R  349 (370)
T 2psq_A          272 MAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAVPSQR  349 (370)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             ECHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899886654 8999999999999999999 99999876554444433333 2334567788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       350 pt~~ell~~  358 (370)
T 2psq_A          350 PTFKQLVED  358 (370)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998753

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.73  E-value=3.5e-18  Score=102.43  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=67.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+...................+...+..+.+++.+||..+|.+|
T Consensus       217 ~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  295 (316)
T 2xir_A          217 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  295 (316)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCchhhcccc-ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5889886655 8999999999999999998 9999977543333332222222234466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++|
T Consensus       296 ps~~ell~~  304 (316)
T 2xir_A          296 PTFSELVEH  304 (316)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.73  E-value=4.9e-18  Score=104.39  Aligned_cols=85  Identities=18%  Similarity=0.315  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ..+.+..++..+.+++.+||..+|++|
T Consensus       282 ~aPE~~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~R  359 (377)
T 3cbl_A          282 TAPEALNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-RLPCPELCPDAVFRLMEQCWAYEPGQR  359 (377)
T ss_dssp             SCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHhHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            5899886554 8999999999999999998 999998766554443333332 234567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       360 ps~~~i~~  367 (377)
T 3cbl_A          360 PSFSTIYQ  367 (377)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999874

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.73  E-value=1.7e-18  Score=103.93  Aligned_cols=92  Identities=24%  Similarity=0.438  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+................+.  .....+..+.+++.+||..+|++
T Consensus       186 ~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  264 (311)
T 3ork_A          186 LSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN  264 (311)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhh
Confidence            5889886654 89999999999999999999999987765555444333322211  23457889999999999999999


Q ss_pred             CCcHHHHhcCcccCC
Q 033880           79 RPTAVKLLDHPFVKG   93 (109)
Q Consensus        79 R~~~~~~l~~~~~~~   93 (109)
                      ||+..++++|+|++.
T Consensus       265 R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          265 RYQTAAEMRADLVRV  279 (311)
T ss_dssp             SCSSHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHH
Confidence            999999999999864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.73  E-value=9.9e-18  Score=100.12  Aligned_cols=86  Identities=24%  Similarity=0.462  Sum_probs=61.7

Q ss_pred             CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCC----CCCCHHHHHHHHHHhhhCCCCCCcHHH
Q 033880           11 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIP----DDLSDEGKDFIRLCLQRNPLNRPTAVK   84 (109)
Q Consensus        11 ~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~~l~~~p~~R~~~~~   84 (109)
                      .++.++|+||+|+++|++++|..||.+................  ...+    ...+..+.+++.+||..+|++||++.+
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e  253 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE  253 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHH
Confidence            3788999999999999999999999765433222111111110  1111    457889999999999999999999999


Q ss_pred             HhcCcccCCCCC
Q 033880           85 LLDHPFVKGAAP   96 (109)
Q Consensus        85 ~l~~~~~~~~~~   96 (109)
                      +++||||.....
T Consensus       254 ~l~hp~~~~~~~  265 (299)
T 3m2w_A          254 FMNHPWIMQSTK  265 (299)
T ss_dssp             HHTSHHHHTGGG
T ss_pred             HhcChhhccccc
Confidence            999999986543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.72  E-value=7.6e-18  Score=105.73  Aligned_cols=85  Identities=22%  Similarity=0.414  Sum_probs=69.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ..+.+..++..+.+++.+||..+|++|
T Consensus       352 ~aPE~~~~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~R  429 (454)
T 1qcf_A          352 TAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-RMPRPENCPEELYNIMMRCWKNRPEER  429 (454)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhccCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhHC
Confidence            6899886655 8999999999999999999 999998776555544443332 234467789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       430 Pt~~~i~~  437 (454)
T 1qcf_A          430 PTFEYIQS  437 (454)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.72  E-value=7.3e-18  Score=101.84  Aligned_cols=86  Identities=21%  Similarity=0.237  Sum_probs=68.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|.+|
T Consensus       186 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  263 (327)
T 3poz_A          186 MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVKCWMIDADSR  263 (327)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTBCHHHHHHHHHHTCSCGGGS
T ss_pred             cChHHhccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhC
Confidence            5889887655 8999999999999999999 999998765444433333332 234466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       264 ps~~ell~~  272 (327)
T 3poz_A          264 PKFRELIIE  272 (327)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.72  E-value=1.1e-17  Score=98.46  Aligned_cols=86  Identities=23%  Similarity=0.364  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+.... ....+...+..+.+++.+||..+|++|
T Consensus       174 ~aPE~~~~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  251 (269)
T 4hcu_A          174 ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDR  251 (269)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHHHhcCCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHHccCCcccC
Confidence            5889886555 8999999999999999999 999998776555554444332 233466678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       252 ps~~~ll~~  260 (269)
T 4hcu_A          252 PAFSRLLRQ  260 (269)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.72  E-value=1.3e-17  Score=98.90  Aligned_cols=87  Identities=25%  Similarity=0.420  Sum_probs=66.8

Q ss_pred             CCCcceec-CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKN-SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA--MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~-~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.. ...++.++|+||+|+++|++++|..||........  ..........+..+...+..+.+++.+||..+|.
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  272 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPK  272 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChh
Confidence            58998842 23368899999999999999999999976532222  2223333334456678899999999999999999


Q ss_pred             CCCcHHHHhc
Q 033880           78 NRPTAVKLLD   87 (109)
Q Consensus        78 ~R~~~~~~l~   87 (109)
                      +||+++++++
T Consensus       273 ~Rps~~~ll~  282 (287)
T 4f0f_A          273 KRPHFSYIVK  282 (287)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.72  E-value=1.2e-17  Score=104.84  Aligned_cols=85  Identities=20%  Similarity=0.393  Sum_probs=69.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... .....+..++..+.+++.+||..+|.+|
T Consensus       353 ~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~R  430 (450)
T 1k9a_A          353 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATR  430 (450)
T ss_dssp             SCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence            6899887655 8999999999999999998 99999876554444444333 2334567889999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       431 pt~~~l~~  438 (450)
T 1k9a_A          431 PTFLQLRE  438 (450)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.72  E-value=6.6e-18  Score=100.25  Aligned_cols=87  Identities=32%  Similarity=0.539  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+.........+...+..+.+++.+||..+|++|
T Consensus       191 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  269 (291)
T 1u46_A          191 CAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR  269 (291)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccC
Confidence            5788876544 7889999999999999999 9999987766555555544444444566788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       270 ps~~~l~~~  278 (291)
T 1u46_A          270 PTFVALRDF  278 (291)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999853

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.72  E-value=5.8e-18  Score=101.37  Aligned_cols=87  Identities=25%  Similarity=0.442  Sum_probs=67.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+...................+...+..+.+++.+||..+|.+|
T Consensus       214 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  292 (313)
T 1t46_A          214 MAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR  292 (313)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             eChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhC
Confidence            5888876654 8999999999999999998 9999977654333333322222233456788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       293 ps~~ell~~  301 (313)
T 1t46_A          293 PTFKQIVQL  301 (313)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.71  E-value=1.4e-17  Score=98.58  Aligned_cols=86  Identities=22%  Similarity=0.377  Sum_probs=68.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       184 ~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  261 (281)
T 1mp8_A          184 MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRR  261 (281)
T ss_dssp             CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhcccCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5888886554 8999999999999999997 999998766555444444332 234567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       262 ps~~~l~~~  270 (281)
T 1mp8_A          262 PRFTELKAQ  270 (281)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.71  E-value=1.1e-17  Score=101.01  Aligned_cols=89  Identities=18%  Similarity=0.295  Sum_probs=71.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||...........+.... .+..+...+..+.+++.+||..+|.+|
T Consensus       212 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  289 (327)
T 2yfx_A          212 MPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDR  289 (327)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCHhHhcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            5889886655 8999999999999999998 889998765544444333332 234466788999999999999999999


Q ss_pred             CcHHHHhcCccc
Q 033880           80 PTAVKLLDHPFV   91 (109)
Q Consensus        80 ~~~~~~l~~~~~   91 (109)
                      |++.+++++.++
T Consensus       290 ps~~~ll~~l~~  301 (327)
T 2yfx_A          290 PNFAIILERIEY  301 (327)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            999999987664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.71  E-value=1.8e-17  Score=104.01  Aligned_cols=91  Identities=20%  Similarity=0.380  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ..+.+..++..+.+++.+||..+|++|
T Consensus       348 ~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~R  425 (452)
T 1fmk_A          348 TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEER  425 (452)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHhHHhcCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5899886655 8999999999999999999 999998776555544444332 234567789999999999999999999


Q ss_pred             CcHHHHhc--CcccCC
Q 033880           80 PTAVKLLD--HPFVKG   93 (109)
Q Consensus        80 ~~~~~~l~--~~~~~~   93 (109)
                      |+++++++  ..++..
T Consensus       426 pt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          426 PTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             CCHHHHHHHHHTTTSC
T ss_pred             cCHHHHHHHHHHHhcc
Confidence            99999875  345543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.71  E-value=5.9e-18  Score=102.25  Aligned_cols=87  Identities=21%  Similarity=0.334  Sum_probs=67.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+...................+...+..+.+++..||..+|++|
T Consensus       233 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  311 (333)
T 2i1m_A          233 MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR  311 (333)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhccCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhC
Confidence            5889886655 8999999999999999998 8899987544443333332223334456678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       312 ps~~~l~~~  320 (333)
T 2i1m_A          312 PTFQQICSF  320 (333)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.71  E-value=3.5e-17  Score=98.25  Aligned_cols=87  Identities=23%  Similarity=0.393  Sum_probs=67.3

Q ss_pred             CCCcceec--------CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHh
Q 033880            1 MAPEVIKN--------SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCL   72 (109)
Q Consensus         1 ~apE~~~~--------~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   72 (109)
                      +|||++..        ...++.++|+||+|+++|++++|..||...........+.............+..+.+++.+||
T Consensus       201 ~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  280 (319)
T 2y4i_B          201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCW  280 (319)
T ss_dssp             SCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHH
T ss_pred             cChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHh
Confidence            47887753        2247889999999999999999999998766555554444443332333457788999999999


Q ss_pred             hhCCCCCCcHHHHhc
Q 033880           73 QRNPLNRPTAVKLLD   87 (109)
Q Consensus        73 ~~~p~~R~~~~~~l~   87 (109)
                      ..+|++||++.++++
T Consensus       281 ~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          281 AFEQEERPTFTKLMD  295 (319)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999999975

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.71  E-value=1.5e-17  Score=98.45  Aligned_cols=86  Identities=21%  Similarity=0.321  Sum_probs=67.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+.... ....+...+..+.+++.+||..+|++|
T Consensus       181 ~aPE~~~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (281)
T 3cc6_A          181 MSPESINFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDYDPSDR  258 (281)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCchhhccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHccCCchhC
Confidence            5888886554 8899999999999999998 999997654444333333222 223466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       259 ps~~ell~~  267 (281)
T 3cc6_A          259 PRFTELVCS  267 (281)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.71  E-value=2.1e-17  Score=99.94  Aligned_cols=85  Identities=22%  Similarity=0.264  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|.+|
T Consensus       186 ~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  263 (327)
T 3lzb_A          186 MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMRKCWMIDADSR  263 (327)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhHC
Confidence            5888887655 8999999999999999999 999998765544443333332 234566788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       264 ps~~ell~  271 (327)
T 3lzb_A          264 PKFRELII  271 (327)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.71  E-value=2.2e-17  Score=101.62  Aligned_cols=86  Identities=23%  Similarity=0.373  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       260 ~aPE~~~~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R  337 (382)
T 3tt0_A          260 MAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQR  337 (382)
T ss_dssp             SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCHHHhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhC
Confidence            5889886654 8999999999999999999 999998766555444443332 334567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       338 ps~~ell~~  346 (382)
T 3tt0_A          338 PTFKQLVED  346 (382)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.71  E-value=2.6e-17  Score=106.61  Aligned_cols=85  Identities=24%  Similarity=0.343  Sum_probs=69.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ....+..++..+.+++..||..+|++|
T Consensus       506 ~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~R  583 (613)
T 2ozo_A          506 YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDR  583 (613)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSTTTS
T ss_pred             eCHhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence            6899886555 8999999999999999998 999998776555554444433 334567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       584 Ps~~~l~~  591 (613)
T 2ozo_A          584 PDFLTVEQ  591 (613)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999853

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.71  E-value=1.7e-17  Score=100.19  Aligned_cols=85  Identities=18%  Similarity=0.336  Sum_probs=69.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++..||..+|++|
T Consensus       221 ~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  298 (325)
T 3kul_A          221 TAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY-RLPAPMGCPHALHQLMLDCWHKDRAQR  298 (325)
T ss_dssp             SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-CCCCCCCcCHHHHHHHHHHccCChhhC
Confidence            5788886554 8899999999999999999 999998776555554444432 234567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       299 ps~~eil~  306 (325)
T 3kul_A          299 PRFSQIVS  306 (325)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.70  E-value=1.2e-17  Score=98.26  Aligned_cols=86  Identities=26%  Similarity=0.417  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||................. ...+...+..+.+++.+||..+|++|
T Consensus       172 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R  249 (268)
T 3sxs_A          172 SAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR-LYRPHLASDTIYQIMYSCWHELPEKR  249 (268)
T ss_dssp             CCHHHHHHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-CCCCTTSCHHHHHHHHHTTCSSGGGS
T ss_pred             CCHHHHhccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC-CCCCCcChHHHHHHHHHHcCCChhhC
Confidence            5788876544 8899999999999999998 9999987665555544443332 23456678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       250 ps~~~ll~~  258 (268)
T 3sxs_A          250 PTFQQLLSS  258 (268)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.70  E-value=2.7e-17  Score=99.60  Aligned_cols=86  Identities=20%  Similarity=0.431  Sum_probs=69.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... .+..+...+..+.+++.+||..+|++|
T Consensus       243 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  320 (343)
T 1luf_A          243 MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADR  320 (343)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhccCC-cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            5889886655 8999999999999999998 999998766555544444332 334567788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       321 ps~~~~~~~  329 (343)
T 1luf_A          321 PSFCSIHRI  329 (343)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999998753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.70  E-value=2.2e-17  Score=97.74  Aligned_cols=86  Identities=23%  Similarity=0.353  Sum_probs=69.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||...........+.... ....+...+..+.+++.+||..+|++|
T Consensus       188 ~aPE~~~~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  265 (283)
T 3gen_A          188 SPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RLYRPHLASEKVYTIMYSCWHEKADER  265 (283)
T ss_dssp             CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             CCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc-CCCCCCcCCHHHHHHHHHHccCChhHC
Confidence            5888886555 8999999999999999998 999998766555544444332 233456678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       266 ps~~~ll~~  274 (283)
T 3gen_A          266 PTFKILLSN  274 (283)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.70  E-value=3.4e-18  Score=102.61  Aligned_cols=88  Identities=28%  Similarity=0.340  Sum_probs=58.5

Q ss_pred             CCCcceecCC-----CCCchHHHHHHHHHHHHHHhCCCCCCCch--------------hHHHHHH-hhCCCCCCCCCCC-
Q 033880            1 MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATTKPPWSQYE--------------GVAAMFK-IGNSKELPTIPDD-   59 (109)
Q Consensus         1 ~apE~~~~~~-----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--------------~~~~~~~-~~~~~~~~~~~~~-   59 (109)
                      ||||++.+..     .++.++||||+||++||+++|..||....              ....... .......|..+.. 
T Consensus       179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~  258 (303)
T 3hmm_A          179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW  258 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc
Confidence            7999986432     25779999999999999999876553211              1112222 2222222333322 


Q ss_pred             ----CCHHHHHHHHHHhhhCCCCCCcHHHHhcC
Q 033880           60 ----LSDEGKDFIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        60 ----~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                          ....+.+++.+||..+|++||++.++++.
T Consensus       259 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          259 QSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                22467889999999999999999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.70  E-value=1.2e-17  Score=100.82  Aligned_cols=86  Identities=22%  Similarity=0.245  Sum_probs=67.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+..... ...+...+..+.+++.+||..+|.+|
T Consensus       184 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R  261 (325)
T 3kex_A          184 MALESIHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER-LAQPQICTIDVYMVMVKCWMIDENIR  261 (325)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB-CCCCTTBCTTTTHHHHHHTCSCTTTS
T ss_pred             cChHHhccCC-CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-CCCCCcCcHHHHHHHHHHcCCChhhC
Confidence            5888886555 8999999999999999999 9999987654444433333322 23455677789999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       262 ps~~el~~~  270 (325)
T 3kex_A          262 PTFKELANE  270 (325)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.70  E-value=5.3e-17  Score=105.53  Aligned_cols=85  Identities=22%  Similarity=0.346  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ....+..++..+.+++..||..+|++|
T Consensus       539 ~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~R  616 (635)
T 4fl3_A          539 YAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENR  616 (635)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             eChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCHhHC
Confidence            5899886655 8999999999999999998 999998876655544444433 334577889999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       617 Ps~~~l~~  624 (635)
T 4fl3_A          617 PGFAAVEL  624 (635)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.70  E-value=3.4e-17  Score=96.16  Aligned_cols=86  Identities=23%  Similarity=0.364  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+.... ....+...+..+.+++.+||..+|++|
T Consensus       172 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  249 (267)
T 3t9t_A          172 ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDR  249 (267)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhcCCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC-cCCCCccCcHHHHHHHHHHccCChhhC
Confidence            5788886555 8899999999999999999 899998765555444443332 223456678999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       250 ps~~~ll~~  258 (267)
T 3t9t_A          250 PAFSRLLRQ  258 (267)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=1.5e-17  Score=98.77  Aligned_cols=86  Identities=22%  Similarity=0.334  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+... ..+..+...+..+.+++..||..+|++|
T Consensus       180 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  257 (287)
T 1u59_A          180 YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-KRMECPPECPPELYALMSDCWIYKWEDR  257 (287)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             cCHHHhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC-CcCCCCCCcCHHHHHHHHHHcCCChhhC
Confidence            5788876544 8899999999999999998 99999876555444443333 2334567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       258 ps~~~l~~~  266 (287)
T 1u59_A          258 PDFLTVEQR  266 (287)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.70  E-value=3.7e-17  Score=98.31  Aligned_cols=86  Identities=27%  Similarity=0.514  Sum_probs=68.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       207 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  284 (322)
T 1p4o_A          207 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMR  284 (322)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhccCC-CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5889886655 8999999999999999999 889998765554444433332 234467788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       285 ps~~e~l~~  293 (322)
T 1p4o_A          285 PSFLEIISS  293 (322)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.70  E-value=5.1e-17  Score=97.42  Aligned_cols=85  Identities=24%  Similarity=0.502  Sum_probs=65.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||......  ....... ....+..+...+..+.+++.+||..+|++
T Consensus       170 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~  247 (307)
T 2eva_A          170 MAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-NGTRPPLIKNLPKPIESLMTRCWSKDPSQ  247 (307)
T ss_dssp             SCHHHHTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH-TTCCCCCBTTCCHHHHHHHHHHTCSSGGG
T ss_pred             EChhhhCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh-cCCCCCcccccCHHHHHHHHHHhcCChhh
Confidence            5899886554 899999999999999999999999754221  1222222 22233456678899999999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||+++++++
T Consensus       248 Rps~~ell~  256 (307)
T 2eva_A          248 RPSMEEIVK  256 (307)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.69  E-value=2e-17  Score=99.12  Aligned_cols=86  Identities=21%  Similarity=0.337  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+... ..+..+...+..+.+++.+||..+|++|
T Consensus       219 ~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R  296 (314)
T 2ivs_A          219 MAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG-HRMERPDNCSEEMYRLMLQCWKQEPDKR  296 (314)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhcCCC-cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcC-CcCCCCccCCHHHHHHHHHHccCChhhC
Confidence            5788876544 8899999999999999999 99999876554444333333 2334567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       297 ps~~~l~~~  305 (314)
T 2ivs_A          297 PVFADISKD  305 (314)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.69  E-value=4.5e-17  Score=96.88  Aligned_cols=85  Identities=24%  Similarity=0.355  Sum_probs=67.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+... ..+..+...+..+.+++.+||..+|++|
T Consensus       187 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~R  264 (291)
T 1xbb_A          187 YAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-ERMGCPAGCPREMYDLMNLCWTYDVENR  264 (291)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             eChHHhccCC-CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5788776544 7889999999999999999 99999876654444333333 2334567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       265 ps~~~l~~  272 (291)
T 1xbb_A          265 PGFAAVEL  272 (291)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.69  E-value=9.1e-18  Score=102.08  Aligned_cols=86  Identities=20%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHhhC--CCCCCC------CCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-VAAMFKIGN--SKELPT------IPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~--~~~~~~------~~~~~~~~~~~l~~~~   71 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+... .........  ....+.      .....+..+.+++..|
T Consensus       227 ~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  305 (345)
T 2v62_A          227 TSLDAHKGVA-LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCA  305 (345)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHH
T ss_pred             cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHH
Confidence            5889886654 89999999999999999999999964211 111111100  000000      0126788999999999


Q ss_pred             hhhCCCCCCcHHHHhc
Q 033880           72 LQRNPLNRPTAVKLLD   87 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~   87 (109)
                      |..+|++||+++++++
T Consensus       306 l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          306 HSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HTCCTTCCCCHHHHHH
T ss_pred             hhcCcccCCCHHHHHH
Confidence            9999999999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=9.8e-17  Score=97.16  Aligned_cols=86  Identities=23%  Similarity=0.364  Sum_probs=68.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       217 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  294 (333)
T 1mqb_A          217 TAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLPTPMDCPSAIYQLMMQCWQQERARR  294 (333)
T ss_dssp             SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred             cCchhcccCC-CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-cCCCcccCCHHHHHHHHHHcCCChhhC
Confidence            5888886554 8999999999999999998 999998766554444443332 233466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       295 ps~~~l~~~  303 (333)
T 1mqb_A          295 PKFADIVSI  303 (333)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=2.5e-17  Score=101.27  Aligned_cols=86  Identities=20%  Similarity=0.348  Sum_probs=66.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |.+||...........+.... ....+..++..+.+++.+||..+|++|
T Consensus       263 ~aPE~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~-~~~~p~~~~~~l~~li~~cl~~dp~~R  340 (373)
T 3c1x_A          263 MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMR  340 (373)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5889886655 8999999999999999999 777887654443333333332 233466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       341 Ps~~ell~~  349 (373)
T 3c1x_A          341 PSFSELVSR  349 (373)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.69  E-value=3.3e-17  Score=103.83  Aligned_cols=85  Identities=21%  Similarity=0.422  Sum_probs=68.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+... .....+..++..+.+++.+||..+|++|
T Consensus       386 ~aPE~~~~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~R  463 (495)
T 1opk_A          386 TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDR  463 (495)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCHhHHhcCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCcChhHC
Confidence            5889886554 8899999999999999998 99999876554444333332 2334567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       464 Ps~~el~~  471 (495)
T 1opk_A          464 PSFAEIHQ  471 (495)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=5.4e-17  Score=103.69  Aligned_cols=91  Identities=20%  Similarity=0.379  Sum_probs=71.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|+++|++++ |..||.+.........+.... ....+..++..+.++|.+||..+|++|
T Consensus       431 ~aPE~~~~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~R  508 (535)
T 2h8h_A          431 TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEER  508 (535)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence            5899886655 8999999999999999999 899998766555544444332 234467789999999999999999999


Q ss_pred             CcHHHHhcC--cccCC
Q 033880           80 PTAVKLLDH--PFVKG   93 (109)
Q Consensus        80 ~~~~~~l~~--~~~~~   93 (109)
                      |+++++++.  .++..
T Consensus       509 Pt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          509 PTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             CCHHHHHHHHHTSSCC
T ss_pred             cCHHHHHHHHHHHhhc
Confidence            999998752  44443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.68  E-value=3.2e-17  Score=98.95  Aligned_cols=86  Identities=24%  Similarity=0.396  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.... ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       208 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~R  285 (327)
T 1fvr_A          208 MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYER  285 (327)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhcccc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            5788876544 7899999999999999998 99999876655444443333 2234466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       286 ps~~ell~~  294 (327)
T 1fvr_A          286 PSFAQILVS  294 (327)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.68  E-value=8.3e-17  Score=95.13  Aligned_cols=85  Identities=18%  Similarity=0.371  Sum_probs=67.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||...........+... .....+...+..+.+++.+||..+|++|
T Consensus       181 ~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (278)
T 1byg_A          181 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMR  258 (278)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhCCCC-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCcccCCHHHHHHHHHHhcCChhhC
Confidence            5788886554 8899999999999999998 99999876544444333332 2334567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       259 ps~~~l~~  266 (278)
T 1byg_A          259 PSFLQLRE  266 (278)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=7e-17  Score=96.10  Aligned_cols=85  Identities=21%  Similarity=0.377  Sum_probs=63.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCC-CCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTK-PPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|++++++++|. ++|...........+... .....+...+..+.+++.+||..+|.+|
T Consensus       195 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  272 (298)
T 3pls_A          195 TALESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG-RRLPQPEYCPDSLYQVMQQCWEADPAVR  272 (298)
T ss_dssp             SCHHHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC-CCCCCCccchHHHHHHHHHHccCChhhC
Confidence            4788775544 889999999999999999954 555554444333333333 2334466788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       273 ps~~~ll~  280 (298)
T 3pls_A          273 PTFRVLVG  280 (298)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.68  E-value=5.7e-17  Score=99.64  Aligned_cols=85  Identities=20%  Similarity=0.347  Sum_probs=66.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++ |..||...........+..... .+.+...+..+.+++.+||..+|++|
T Consensus       217 ~aPE~~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~R  294 (373)
T 2qol_A          217 TSPEAIAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LPPPMDCPAALYQLMLDCWQKDRNNR  294 (373)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEE-CCCCTTCBHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCccccHHHHHHHHHHhCcChhhC
Confidence            5889886555 8999999999999999998 9999987665544444433322 23456778999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       295 Ps~~~i~~  302 (373)
T 2qol_A          295 PKFEQIVS  302 (373)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.68  E-value=5.6e-17  Score=97.26  Aligned_cols=86  Identities=24%  Similarity=0.380  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.............. .+..+...+..+.+++.+||..+|++|
T Consensus       216 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  293 (313)
T 3brb_A          216 IAIESLADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDR  293 (313)
T ss_dssp             SCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             cCchhhcCCC-ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhC
Confidence            4788876544 8999999999999999999 888998765544444333332 234567788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       294 ps~~~l~~~  302 (313)
T 3brb_A          294 PTFSVLRLQ  302 (313)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.68  E-value=2.8e-17  Score=97.84  Aligned_cols=86  Identities=14%  Similarity=0.146  Sum_probs=62.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNS---KELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+...   ......+...   ...+......+..+.+++.+||..
T Consensus       185 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  263 (298)
T 1csn_A          185 MSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL  263 (298)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred             CCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcC
Confidence            5888876554 89999999999999999999999976421   1111111111   111112346789999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||+++++++
T Consensus       264 dp~~RP~~~~l~~  276 (298)
T 1csn_A          264 AFDATPDYDYLQG  276 (298)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.68  E-value=9.1e-17  Score=95.52  Aligned_cols=87  Identities=23%  Similarity=0.470  Sum_probs=64.6

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC----CCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE----LPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.  ....++.++|+||+|++++++++|..||.................    ........+..+.+++.+||..
T Consensus       189 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  268 (289)
T 3og7_A          189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK  268 (289)
T ss_dssp             CCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCS
T ss_pred             cCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccC
Confidence            5788775  123478899999999999999999999987554444333222111    1123446789999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||++.++++
T Consensus       269 ~p~~Rps~~ell~  281 (289)
T 3og7_A          269 KRDERPSFPRILA  281 (289)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.67  E-value=1.2e-16  Score=94.74  Aligned_cols=85  Identities=21%  Similarity=0.422  Sum_probs=67.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|.+|
T Consensus       179 ~aPE~~~~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~R  256 (288)
T 3kfa_A          179 TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDR  256 (288)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHhCCChhhC
Confidence            5788886655 8999999999999999999 99999876544443333333 2234567788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       257 ps~~~~~~  264 (288)
T 3kfa_A          257 PSFAEIHQ  264 (288)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.67  E-value=9.5e-17  Score=95.75  Aligned_cols=90  Identities=19%  Similarity=0.320  Sum_probs=66.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC---CCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP---TIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.................   ..+...+..+.+++.+||..+|.
T Consensus       179 ~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  257 (294)
T 4eqm_A          179 FSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKA  257 (294)
T ss_dssp             CCHHHHHTCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred             cCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHh
Confidence            5899886655 8899999999999999999999998776555444433332211   13456789999999999999999


Q ss_pred             CCCcHHHHhcCccc
Q 033880           78 NRPTAVKLLDHPFV   91 (109)
Q Consensus        78 ~R~~~~~~l~~~~~   91 (109)
                      +||+..+.+.+.|.
T Consensus       258 ~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          258 NRYKTIQEMKDDLS  271 (294)
T ss_dssp             GSCSSHHHHHHHHH
T ss_pred             HccccHHHHHHHHH
Confidence            99954444444443

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.67  E-value=4.7e-17  Score=96.78  Aligned_cols=86  Identities=14%  Similarity=0.193  Sum_probs=62.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhC---CCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGN---SKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+....   .....+..   ....+......+..+.+++.+||..
T Consensus       182 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  260 (296)
T 3uzp_A          182 ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSL  260 (296)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTS
T ss_pred             CChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhc
Confidence            5788886555 889999999999999999999999763211   11111110   0000112355788999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||+++++++
T Consensus       261 dp~~Rps~~~l~~  273 (296)
T 3uzp_A          261 RFDDKPDYSYLRQ  273 (296)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CcCcCCCHHHHHH
Confidence            9999999999865

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.67  E-value=1e-16  Score=94.77  Aligned_cols=85  Identities=26%  Similarity=0.465  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+... .....+...+..+.+++.+||..+|++|
T Consensus       177 ~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  254 (279)
T 1qpc_A          177 TAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDR  254 (279)
T ss_dssp             SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChhhhccCC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhC
Confidence            5788776544 7889999999999999999 89999876655544444333 2234466788999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       255 ps~~~l~~  262 (279)
T 1qpc_A          255 PTFDYLRS  262 (279)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.67  E-value=2.5e-17  Score=97.72  Aligned_cols=85  Identities=26%  Similarity=0.484  Sum_probs=63.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+...++.++|+||+|+++|++++| ..|+................   ..+...+..+.+++.+||..+|++|
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~R  260 (289)
T 4fvq_A          184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH---QLPAPKAAELANLINNCMDYEPDHR  260 (289)
T ss_dssp             SCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC---CCCCCSSCTTHHHHHHHSCSSGGGS
T ss_pred             cCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccC---CCCCCCCHHHHHHHHHHcCCChhHC
Confidence            5899887634589999999999999999994 55565544333332222221   3344557789999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       261 ps~~~ll~~  269 (289)
T 4fvq_A          261 PSFRAIIRD  269 (289)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=1.6e-16  Score=94.64  Aligned_cols=86  Identities=23%  Similarity=0.296  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH---------------HHHHhhCCCCCCCCCCCCCHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---------------AMFKIGNSKELPTIPDDLSDEGK   65 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~   65 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..|+.......               ..............+..++..+.
T Consensus       184 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  262 (295)
T 3ugc_A          184 YAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIY  262 (295)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             eCcHHhcCCC-CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHH
Confidence            5889887655 8999999999999999999988876432110               11111122223345677899999


Q ss_pred             HHHHHHhhhCCCCCCcHHHHhc
Q 033880           66 DFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        66 ~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      +++.+||..+|++||++.++++
T Consensus       263 ~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          263 MIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHH
Confidence            9999999999999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.67  E-value=6.2e-17  Score=97.96  Aligned_cols=86  Identities=23%  Similarity=0.374  Sum_probs=67.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|++++++++ |..||.+.........+.... ....+...+..+.+++.+||..+|++|
T Consensus       226 ~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R  303 (334)
T 2pvf_A          226 MAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQR  303 (334)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eChHHhcCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhC
Confidence            5788876544 8899999999999999999 999998765544443333322 234466788999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       304 ps~~ell~~  312 (334)
T 2pvf_A          304 PTFKQLVED  312 (334)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.66  E-value=7.7e-17  Score=95.79  Aligned_cols=86  Identities=14%  Similarity=0.193  Sum_probs=62.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhC---CCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGN---SKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+....   ........   ...........+..+.+++..||..
T Consensus       182 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  260 (296)
T 4hgt_A          182 ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSL  260 (296)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTS
T ss_pred             cchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhc
Confidence            5788886555 899999999999999999999999764221   11111100   0000112245688999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||+++++++
T Consensus       261 ~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          261 RFDDKPDYSYLRQ  273 (296)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CCCCCCCHHHHHH
Confidence            9999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.66  E-value=2.9e-17  Score=100.45  Aligned_cols=86  Identities=12%  Similarity=0.118  Sum_probs=61.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC---CCCC------CCCCCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN---SKEL------PTIPDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~l~~~~   71 (109)
                      ||||++.+.. ++.++|+||+|+++|++++|..||.+............   ....      .......+..+.+++..|
T Consensus       228 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  306 (364)
T 3op5_A          228 TSIDAHNGVA-PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETV  306 (364)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHH
T ss_pred             cCHHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHH
Confidence            6899886655 89999999999999999999999975322111110000   0000      001245688999999999


Q ss_pred             hhhCCCCCCcHHHHhc
Q 033880           72 LQRNPLNRPTAVKLLD   87 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~   87 (109)
                      |..+|++||+++++++
T Consensus       307 l~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          307 KLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HTCCTTCCCCHHHHHH
T ss_pred             hcCCCCCCCCHHHHHH
Confidence            9999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.66  E-value=3.5e-16  Score=93.72  Aligned_cols=86  Identities=31%  Similarity=0.577  Sum_probs=62.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG--VAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.+...  .............+......+..+.+++.+||..+|++
T Consensus       203 ~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  281 (310)
T 2wqm_A          203 MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEK  281 (310)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGG
T ss_pred             eChHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhh
Confidence            5788886544 88999999999999999999999975431  11222222222222223567889999999999999999


Q ss_pred             CCcHHHHhc
Q 033880           79 RPTAVKLLD   87 (109)
Q Consensus        79 R~~~~~~l~   87 (109)
                      ||+++++++
T Consensus       282 Rps~~~il~  290 (310)
T 2wqm_A          282 RPDVTYVYD  290 (310)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.66  E-value=5.6e-17  Score=97.85  Aligned_cols=87  Identities=20%  Similarity=0.352  Sum_probs=65.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--------------HHHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--------------AAMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||......              ...............+...+..+.+
T Consensus       197 ~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (327)
T 3lxl_A          197 YAPESLSDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHE  275 (327)
T ss_dssp             SCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cCHHHhccCC-CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHH
Confidence            5788876544 789999999999999999999988654321              1111222222233456778999999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhcC
Q 033880           67 FIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      ++.+||..+|++||++++++++
T Consensus       276 li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          276 LMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.66  E-value=8.2e-17  Score=104.87  Aligned_cols=93  Identities=17%  Similarity=0.242  Sum_probs=64.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---------h-----CCC----CC-C---CCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---------G-----NSK----EL-P---TIPD   58 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---------~-----~~~----~~-~---~~~~   58 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+..........         .     ...    .. +   ....
T Consensus       190 ~APE~l~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~  268 (676)
T 3qa8_A          190 LAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSG  268 (676)
T ss_dssp             CSSCSSCCSC-CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCG
T ss_pred             CChHHhccCC-CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhch
Confidence            5899986555 899999999999999999999999654222111000         0     000    00 0   0112


Q ss_pred             CCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           59 DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        59 ~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                      ..+..+.+++.+||..+|++||++.++++|+||...
T Consensus       269 ~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          269 ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             GGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred             hhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence            245789999999999999999999999999999753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.66  E-value=2.7e-17  Score=98.92  Aligned_cols=89  Identities=21%  Similarity=0.368  Sum_probs=60.8

Q ss_pred             CCCcceec-------CCCCCchHHHHHHHHHHHHHHhCCCCCCCchh----HHHHHHhhCCCC-----------------
Q 033880            1 MAPEVIKN-------SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG----VAAMFKIGNSKE-----------------   52 (109)
Q Consensus         1 ~apE~~~~-------~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~-----------------   52 (109)
                      +|||++..       ...++.++|+||+|+++|++++|..||.....    ......+.....                 
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (319)
T 4euu_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (319)
T ss_dssp             CCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCcccc
Confidence            57887642       23488999999999999999999999964321    122222211110                 


Q ss_pred             ---CC---CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCc
Q 033880           53 ---LP---TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHP   89 (109)
Q Consensus        53 ---~~---~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~   89 (109)
                         .+   ......+..+.+++.+||..+|++|++++++++|+
T Consensus       262 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence               00   01112345678899999999999999999999886

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.65  E-value=2.3e-16  Score=102.91  Aligned_cols=85  Identities=22%  Similarity=0.377  Sum_probs=69.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... ++.++|+||+|+++|++++ |..||.+.........+.... .+..+..++..+.+++.+||..+|++|
T Consensus       559 ~aPE~~~~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R  636 (656)
T 2j0j_A          559 MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRR  636 (656)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             eCHHHhcCCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhHC
Confidence            6899886554 8999999999999999997 999998776555544443332 234567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       637 Ps~~el~~  644 (656)
T 2j0j_A          637 PRFTELKA  644 (656)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.65  E-value=1.8e-16  Score=94.45  Aligned_cols=85  Identities=20%  Similarity=0.350  Sum_probs=65.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||+|++++++++ +.+||................ ....+...+..+.+++.+||..+|++|
T Consensus       199 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R  276 (298)
T 3f66_A          199 MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMR  276 (298)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHcCCChhhC
Confidence            5788876554 8899999999999999999 666776654444433333332 233466678999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       277 ps~~ell~  284 (298)
T 3f66_A          277 PSFSELVS  284 (298)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.64  E-value=5e-16  Score=93.18  Aligned_cols=86  Identities=24%  Similarity=0.310  Sum_probs=62.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+.........+..... ....+...+..+.+++.+||..+|++|
T Consensus       202 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  280 (309)
T 2h34_A          202 MAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDR  280 (309)
T ss_dssp             CCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHH
Confidence            5899886554 88899999999999999999999987654432222222211 112355678899999999999999999


Q ss_pred             C-cHHHHhc
Q 033880           80 P-TAVKLLD   87 (109)
Q Consensus        80 ~-~~~~~l~   87 (109)
                      | +++++++
T Consensus       281 p~s~~~l~~  289 (309)
T 2h34_A          281 YVTCGDLSA  289 (309)
T ss_dssp             CSSHHHHHH
T ss_pred             HHhHHHHHH
Confidence            9 7888764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.64  E-value=3.1e-16  Score=95.54  Aligned_cols=86  Identities=14%  Similarity=0.188  Sum_probs=62.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCch-hHHHHHHhhC--CCCCCCC------CCCCCHHHHHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGN--SKELPTI------PDDLSDEGKDFIRLC   71 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~--~~~~~~~------~~~~~~~~~~l~~~~   71 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.... ..........  .......      ....+..+.+++.+|
T Consensus       235 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  313 (352)
T 2jii_A          235 ISMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVV  313 (352)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHH
T ss_pred             cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHH
Confidence            5788886544 8999999999999999999999997653 2222111110  0011111      124689999999999


Q ss_pred             hhhCCCCCCcHHHHhc
Q 033880           72 LQRNPLNRPTAVKLLD   87 (109)
Q Consensus        72 l~~~p~~R~~~~~~l~   87 (109)
                      |..+|++||+++++++
T Consensus       314 l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          314 MALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HTCCTTCCCCHHHHHH
T ss_pred             HhCChhhCCCHHHHHH
Confidence            9999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.64  E-value=1.7e-16  Score=95.72  Aligned_cols=84  Identities=23%  Similarity=0.326  Sum_probs=53.5

Q ss_pred             CCCccee--cCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~--~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||++.  ....++.++|+||+|+++|++++|..||..........    ...........+..+.+++.+||..+|.+
T Consensus       217 ~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~  292 (337)
T 3ll6_A          217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEE  292 (337)
T ss_dssp             -------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGG
T ss_pred             CChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc----CcccCCcccccchHHHHHHHHHccCChhh
Confidence            5899873  22347889999999999999999999997544322211    11111224455677899999999999999


Q ss_pred             CCcHHHHhcC
Q 033880           79 RPTAVKLLDH   88 (109)
Q Consensus        79 R~~~~~~l~~   88 (109)
                      ||++.+++++
T Consensus       293 Rps~~e~l~~  302 (337)
T 3ll6_A          293 RLSIAEVVHQ  302 (337)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.63  E-value=1.8e-16  Score=95.14  Aligned_cols=87  Identities=22%  Similarity=0.319  Sum_probs=62.9

Q ss_pred             CCCcceecCC--CCCchHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCC
Q 033880            1 MAPEVIKNSS--GCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNP   76 (109)
Q Consensus         1 ~apE~~~~~~--~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   76 (109)
                      +|||++....  .++.++|+||+|+++|++++|..||......  ........ ....+.....+..+.+++.+||..+|
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp  288 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIPQSPRHSSALWQLLNSMMTVDP  288 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCCccccCCHHHHHHHHHHhhcCh
Confidence            5899875432  2578999999999999999999998642111  11111122 22223345678999999999999999


Q ss_pred             CCCCcHHHHhcC
Q 033880           77 LNRPTAVKLLDH   88 (109)
Q Consensus        77 ~~R~~~~~~l~~   88 (109)
                      .+||++++++++
T Consensus       289 ~~Rps~~~ll~~  300 (317)
T 2buj_A          289 HQRPHIPLLLSQ  300 (317)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCCCHHHHHHH
Confidence            999999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.62  E-value=3.1e-16  Score=94.41  Aligned_cols=86  Identities=24%  Similarity=0.325  Sum_probs=64.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH--------------HHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA--------------AMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||.......              ..............+...+..+.+
T Consensus       204 ~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  282 (318)
T 3lxp_A          204 YAPECLKEYK-FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYH  282 (318)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             eChHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHH
Confidence            5788876544 7889999999999999999999986532210              111222222333456778899999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhc
Q 033880           67 FIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      ++.+||..+|.+||+++++++
T Consensus       283 li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          283 LMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.62  E-value=4.3e-16  Score=92.90  Aligned_cols=86  Identities=27%  Similarity=0.379  Sum_probs=63.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCc--------------hhHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY--------------EGVAAMFKIGNSKELPTIPDDLSDEGKD   66 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..|+...              ..................+...+..+.+
T Consensus       196 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  274 (302)
T 4e5w_A          196 YAPECLMQSK-FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQ  274 (302)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cCCeeecCCC-CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHH
Confidence            5788776554 788999999999999999998775322              1111222222222233456778899999


Q ss_pred             HHHHHhhhCCCCCCcHHHHhc
Q 033880           67 FIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        67 l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      ++.+||..+|.+||++.++++
T Consensus       275 li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          275 LMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCCCCCCCCHHHHHH
Confidence            999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.62  E-value=3.5e-17  Score=98.65  Aligned_cols=89  Identities=19%  Similarity=0.299  Sum_probs=60.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH--------HHHHHhhCCCCC---------CCCCCCCCHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV--------AAMFKIGNSKEL---------PTIPDDLSDE   63 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~   63 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..||......        ............         ...+...+..
T Consensus       202 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (326)
T 3uim_A          202 IAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ  280 (326)
T ss_dssp             CCHHHHHHSE-ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHH
T ss_pred             cCHHHhccCC-CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHH
Confidence            5888886555 889999999999999999999999532110        000000001000         0011112356


Q ss_pred             HHHHHHHHhhhCCCCCCcHHHHhcCcc
Q 033880           64 GKDFIRLCLQRNPLNRPTAVKLLDHPF   90 (109)
Q Consensus        64 ~~~l~~~~l~~~p~~R~~~~~~l~~~~   90 (109)
                      +.+++..||..+|.+||++++++++-.
T Consensus       281 l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          281 LIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            889999999999999999999998744

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.61  E-value=9.3e-17  Score=96.68  Aligned_cols=87  Identities=18%  Similarity=0.210  Sum_probs=59.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-------HHHhhCCC----CCCC----CCCCCCHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-------MFKIGNSK----ELPT----IPDDLSDEGK   65 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-------~~~~~~~~----~~~~----~~~~~~~~~~   65 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+......       ........    ..+.    .+...+..+.
T Consensus       208 ~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (321)
T 2qkw_B          208 IDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFG  286 (321)
T ss_dssp             CCHHHHHHCB-CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHH
T ss_pred             cCHHHhcCCC-CCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHH
Confidence            5889886554 89999999999999999999999865322110       00000000    0011    1122345678


Q ss_pred             HHHHHHhhhCCCCCCcHHHHhcC
Q 033880           66 DFIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        66 ~l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      +++.+||..+|++||++.+++++
T Consensus       287 ~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          287 DTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHHH
Confidence            89999999999999999999865

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.60  E-value=6.6e-16  Score=93.20  Aligned_cols=86  Identities=23%  Similarity=0.296  Sum_probs=63.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH---------------HHHHhhCCCCCCCCCCCCCHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---------------AMFKIGNSKELPTIPDDLSDEGK   65 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~   65 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..|+.......               ............+.+...+..+.
T Consensus       215 ~aPE~~~~~~-~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  293 (326)
T 2w1i_A          215 YAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIY  293 (326)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             ECchhhcCCC-CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHH
Confidence            5788876544 7889999999999999999988875431110               11111122222344677889999


Q ss_pred             HHHHHHhhhCCCCCCcHHHHhc
Q 033880           66 DFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        66 ~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                      +++.+||..+|++||++.++++
T Consensus       294 ~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          294 MIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.60  E-value=2.3e-16  Score=95.17  Aligned_cols=87  Identities=21%  Similarity=0.268  Sum_probs=57.9

Q ss_pred             CCCcceecCC----CCCchHHHHHHHHHHHHHHhCCCCCCCchh---------------HHHHHH-hhCCCCCCCCCC--
Q 033880            1 MAPEVIKNSS----GCNLAVDIWSLGCTVLEMATTKPPWSQYEG---------------VAAMFK-IGNSKELPTIPD--   58 (109)
Q Consensus         1 ~apE~~~~~~----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---------------~~~~~~-~~~~~~~~~~~~--   58 (109)
                      +|||++.+..    .++.++|+||+|+++|++++|..||.+...               ...... .......+..+.  
T Consensus       200 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (322)
T 3soc_A          200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYW  279 (322)
T ss_dssp             CCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             cCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccc
Confidence            5888876421    255688999999999999999999865321               111111 111211121111  


Q ss_pred             ---CCCHHHHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           59 ---DLSDEGKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        59 ---~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                         ..+..+.+++.+||..+|++||++.++++
T Consensus       280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          280 QKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               12345889999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.60  E-value=5.5e-16  Score=98.10  Aligned_cols=86  Identities=14%  Similarity=0.166  Sum_probs=61.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhhC---CCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIGN---SKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+....   ..+..+..   ..........++.++.+++..||..
T Consensus       180 ~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~  258 (483)
T 3sv0_A          180 ASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSL  258 (483)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTC
T ss_pred             cCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcC
Confidence            5788876554 899999999999999999999999764321   11111110   0000112245688999999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|++||++.++++
T Consensus       259 dP~~RPs~~el~~  271 (483)
T 3sv0_A          259 RFDDKPDYSYLKR  271 (483)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999998753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.59  E-value=5.8e-16  Score=93.59  Aligned_cols=85  Identities=18%  Similarity=0.281  Sum_probs=59.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHhhCCCCC-C--CCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNSKEL-P--TIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~l~~   74 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..||.+...   ......+...... +  ......+ .+.+++..||..
T Consensus       184 ~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~  261 (330)
T 2izr_A          184 MSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRL  261 (330)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHC
T ss_pred             cChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhC
Confidence            5889886654 89999999999999999999999976422   1111111111000 0  0112234 899999999999


Q ss_pred             CCCCCCcHHHHhc
Q 033880           75 NPLNRPTAVKLLD   87 (109)
Q Consensus        75 ~p~~R~~~~~~l~   87 (109)
                      +|.+||+++++.+
T Consensus       262 ~p~~RP~~~~l~~  274 (330)
T 2izr_A          262 DFFEKPDYDYLRK  274 (330)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CCCCCCCHHHHHH
Confidence            9999999998754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.59  E-value=6.5e-16  Score=91.33  Aligned_cols=85  Identities=21%  Similarity=0.330  Sum_probs=64.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      +|||++.+.. ++.++|+||+|++++++++|..|+.....  ........    ..+...+..+.+++.+||..+|.+||
T Consensus       188 ~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rp  260 (284)
T 2a19_B          188 MSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAFETSK--FFTDLRDG----IISDIFDKKEKTLLQKLLSKKPEDRP  260 (284)
T ss_dssp             SCHHHHHCSC-CCTHHHHHHHHHHHHHHHSCCSSHHHHHH--HHHHHHTT----CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChhhhccCC-CcchhhhHHHHHHHHHHHhcCCcchhHHH--HHHHhhcc----cccccCCHHHHHHHHHHccCChhhCc
Confidence            5888886554 88999999999999999999877643221  11122221    23456788999999999999999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      ++.+++++.+.-
T Consensus       261 s~~e~l~~l~~~  272 (284)
T 2a19_B          261 NTSEILRTLTVW  272 (284)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999999886543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.59  E-value=6.9e-16  Score=91.92  Aligned_cols=87  Identities=30%  Similarity=0.528  Sum_probs=58.7

Q ss_pred             CCCcceecCC-----CCCchHHHHHHHHHHHHHHhC----------CCCCCCch----hHHHHHHh-hCCCCCCCCCC--
Q 033880            1 MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATT----------KPPWSQYE----GVAAMFKI-GNSKELPTIPD--   58 (109)
Q Consensus         1 ~apE~~~~~~-----~~~~~~d~ws~g~~~~~~~~g----------~~p~~~~~----~~~~~~~~-~~~~~~~~~~~--   58 (109)
                      +|||++.+..     .++.++|+||+|+++|++++|          ..||....    ........ ......+..+.  
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (301)
T 3q4u_A          184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW  263 (301)
T ss_dssp             CCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             eChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhh
Confidence            5888886542     144789999999999999999          77875431    11122221 11222222221  


Q ss_pred             ---CCCHHHHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           59 ---DLSDEGKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        59 ---~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                         ..+..+.+++.+||..+|++||++.++++
T Consensus       264 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          264 FSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence               13467899999999999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.57  E-value=1.5e-16  Score=95.32  Aligned_cols=82  Identities=24%  Similarity=0.294  Sum_probs=60.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH-----HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA-----MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      +|||++.+.. ++.++|+||+|+++|++++|..|+........     ......    ...+..++..+.+++.+||..+
T Consensus       189 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~d  263 (310)
T 3s95_A          189 MAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD----RYCPPNCPPSFFPITVRCCDLD  263 (310)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH----HTCCTTCCTTHHHHHHHHTCSS
T ss_pred             eCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc----ccCCCCCCHHHHHHHHHHccCC
Confidence            5889886544 89999999999999999999888754321100     000000    0124566788999999999999


Q ss_pred             CCCCCcHHHHhc
Q 033880           76 PLNRPTAVKLLD   87 (109)
Q Consensus        76 p~~R~~~~~~l~   87 (109)
                      |++||++.++++
T Consensus       264 P~~Rps~~~l~~  275 (310)
T 3s95_A          264 PEKRPSFVKLEH  275 (310)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=2.5e-15  Score=90.71  Aligned_cols=87  Identities=24%  Similarity=0.400  Sum_probs=57.9

Q ss_pred             CCCcceecCCCCCc------hHHHHHHHHHHHHHHhC----------CCCCCCchh----HHHHHH-hhCCCCCCCCCC-
Q 033880            1 MAPEVIKNSSGCNL------AVDIWSLGCTVLEMATT----------KPPWSQYEG----VAAMFK-IGNSKELPTIPD-   58 (109)
Q Consensus         1 ~apE~~~~~~~~~~------~~d~ws~g~~~~~~~~g----------~~p~~~~~~----~~~~~~-~~~~~~~~~~~~-   58 (109)
                      +|||++.+.. ++.      ++|+||+|+++|++++|          ..||.....    ...... .......+..+. 
T Consensus       213 ~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (337)
T 3mdy_A          213 MPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR  291 (337)
T ss_dssp             CCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG
T ss_pred             eChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccccc
Confidence            5889886544 333      49999999999999999          666654211    111111 111211222222 


Q ss_pred             ----CCCHHHHHHHHHHhhhCCCCCCcHHHHhcC
Q 033880           59 ----DLSDEGKDFIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        59 ----~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                          .++..+.+++.+||..+|++||++.+++++
T Consensus       292 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                345668899999999999999999999865

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.55  E-value=1.6e-15  Score=91.63  Aligned_cols=95  Identities=22%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             CCCcceecC------CCCCchHHHHHHHHHHHHHHhCCCCCCCchh-----------------HHHHH-HhhCCCCCCCC
Q 033880            1 MAPEVIKNS------SGCNLAVDIWSLGCTVLEMATTKPPWSQYEG-----------------VAAMF-KIGNSKELPTI   56 (109)
Q Consensus         1 ~apE~~~~~------~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~-----------------~~~~~-~~~~~~~~~~~   56 (109)
                      +|||++.+.      ..++.++|+||+|+++|++++|..||.....                 ..... ........+..
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (336)
T 3g2f_A          195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF  274 (336)
T ss_dssp             CCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             eCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCC
Confidence            578887542      1256789999999999999998665422110                 00111 11111122222


Q ss_pred             CCC------CCHHHHHHHHHHhhhCCCCCCcHHHHhc------CcccCCCC
Q 033880           57 PDD------LSDEGKDFIRLCLQRNPLNRPTAVKLLD------HPFVKGAA   95 (109)
Q Consensus        57 ~~~------~~~~~~~l~~~~l~~~p~~R~~~~~~l~------~~~~~~~~   95 (109)
                      +..      .+..+.+++.+||..+|++||+++++++      +.|-+...
T Consensus       275 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          275 PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS  325 (336)
T ss_dssp             CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred             CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence            222      2346899999999999999999999854      45555443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.54  E-value=7.2e-16  Score=92.17  Aligned_cols=86  Identities=22%  Similarity=0.334  Sum_probs=58.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH---H-HHhhC---------CCCCCCCCCCCCHHHHHH
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA---M-FKIGN---------SKELPTIPDDLSDEGKDF   67 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~---~-~~~~~---------~~~~~~~~~~~~~~~~~l   67 (109)
                      +|||++.+ . ++.++|+||+|++++++++|..||........   . .....         .......+...+..+.++
T Consensus       202 ~aPE~~~~-~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  279 (307)
T 2nru_A          202 MAPEALRG-E-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV  279 (307)
T ss_dssp             CCHHHHTT-E-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHH
T ss_pred             CChHHhcC-C-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHH
Confidence            57887643 3 78899999999999999999999975432111   0 01100         011111122334568889


Q ss_pred             HHHHhhhCCCCCCcHHHHhcC
Q 033880           68 IRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        68 ~~~~l~~~p~~R~~~~~~l~~   88 (109)
                      +.+||..+|.+||++++++++
T Consensus       280 i~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          280 ASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999998754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.54  E-value=6.3e-15  Score=89.21  Aligned_cols=88  Identities=28%  Similarity=0.413  Sum_probs=58.5

Q ss_pred             CCCcceecCCC-----CCchHHHHHHHHHHHHHHhC----------CCCCCCchh----HHHHHH-hhCCCCCCCCCC--
Q 033880            1 MAPEVIKNSSG-----CNLAVDIWSLGCTVLEMATT----------KPPWSQYEG----VAAMFK-IGNSKELPTIPD--   58 (109)
Q Consensus         1 ~apE~~~~~~~-----~~~~~d~ws~g~~~~~~~~g----------~~p~~~~~~----~~~~~~-~~~~~~~~~~~~--   58 (109)
                      +|||++.+...     ++.++|+||+|+++|++++|          ..||.....    ...... .......+..+.  
T Consensus       218 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (342)
T 1b6c_B          218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW  297 (342)
T ss_dssp             CCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             CCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc
Confidence            57888754321     23689999999999999998          678754321    122222 222222222222  


Q ss_pred             ---CCCHHHHHHHHHHhhhCCCCCCcHHHHhcC
Q 033880           59 ---DLSDEGKDFIRLCLQRNPLNRPTAVKLLDH   88 (109)
Q Consensus        59 ---~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   88 (109)
                         .....+.+++.+||..+|++||++.+++++
T Consensus       298 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          298 QSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence               223568899999999999999999999865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.46  E-value=5.4e-15  Score=91.45  Aligned_cols=87  Identities=21%  Similarity=0.335  Sum_probs=57.5

Q ss_pred             CCCcceecC-------CCCCchHHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHhhCCCCC----------------
Q 033880            1 MAPEVIKNS-------SGCNLAVDIWSLGCTVLEMATTKPPWSQYE----GVAAMFKIGNSKEL----------------   53 (109)
Q Consensus         1 ~apE~~~~~-------~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~----------------   53 (109)
                      +|||++...       ..++.++|+||+|+++|++++|..||....    .......+......                
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  261 (396)
T 4eut_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDW  261 (396)
T ss_dssp             CCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEE
T ss_pred             cCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCccc
Confidence            577876431       236789999999999999999999986422    12222222221110                


Q ss_pred             ----C---CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           54 ----P---TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        54 ----~---~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                          +   ......+..+.+++.+||..+|++|++++++++
T Consensus       262 ~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                0   001123456788999999999999999999754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.42  E-value=1.2e-13  Score=82.19  Aligned_cols=76  Identities=16%  Similarity=0.161  Sum_probs=55.6

Q ss_pred             CCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHH---HhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHh
Q 033880           12 CNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF---KIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLL   86 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l   86 (109)
                      ++.++|+||+|+++|++++|..||.+........   ........+  ......+..+.+++.+||..+|++| ++.+++
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~  257 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLL  257 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHH
Confidence            6889999999999999999999998754332111   001111100  1235678899999999999999999 999987


Q ss_pred             cC
Q 033880           87 DH   88 (109)
Q Consensus        87 ~~   88 (109)
                      +.
T Consensus       258 ~~  259 (286)
T 3uqc_A          258 NL  259 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.32  E-value=2.3e-13  Score=83.28  Aligned_cols=78  Identities=17%  Similarity=0.095  Sum_probs=55.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||........    ........  ...+....+++..|+..+|.+|+
T Consensus       252 ~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~l~~~p~~r~  324 (365)
T 3e7e_A          252 QCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----KPEGLFRR--LPHLDMWNEFFHVMLNIPDCHHL  324 (365)
T ss_dssp             CCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE----EECSCCTT--CSSHHHHHHHHHHHHCCCCTTCC
T ss_pred             CChHHhcCCC-CCccccHHHHHHHHHHHHhCCCccccCCCCce----eechhccc--cCcHHHHHHHHHHHcCCCCCCcc
Confidence            6899987655 89999999999999999999999864332110    01111111  12356788999999999999996


Q ss_pred             c-HHHH
Q 033880           81 T-AVKL   85 (109)
Q Consensus        81 ~-~~~~   85 (109)
                      + ++++
T Consensus       325 ~~~~~l  330 (365)
T 3e7e_A          325 PSLDLL  330 (365)
T ss_dssp             CCHHHH
T ss_pred             hHHHHH
Confidence            5 4443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.25  E-value=5e-13  Score=87.62  Aligned_cols=82  Identities=17%  Similarity=0.206  Sum_probs=58.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.. . ++.++|+||+|++++++++|..||.+....        ...........+..+.+++.+||..+|++|+
T Consensus       244 ~aPE~~~~-~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~  313 (681)
T 2pzi_A          244 QAPEIVRT-G-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF  313 (681)
T ss_dssp             SCTTHHHH-C-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCHHHHcC-C-CCCceehhhhHHHHHHHHhCCCCCcccccc--------cccccccccccCHHHHHHHhhhccCChhhCC
Confidence            68998854 3 588999999999999999998877643110        0000000112346788999999999999999


Q ss_pred             cHHHHhcCcccC
Q 033880           81 TAVKLLDHPFVK   92 (109)
Q Consensus        81 ~~~~~l~~~~~~   92 (109)
                      +..+.+.|+|+.
T Consensus       314 ~~~~~l~~~l~~  325 (681)
T 2pzi_A          314 TTAEEMSAQLTG  325 (681)
T ss_dssp             SSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            887777776653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.17  E-value=6.6e-12  Score=76.03  Aligned_cols=85  Identities=19%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHH-HHHHHhCCCCCCCchhHH-HHHHhh---CCCCCC--CCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCT-VLEMATTKPPWSQYEGVA-AMFKIG---NSKELP--TIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~-~~~~~~g~~p~~~~~~~~-~~~~~~---~~~~~~--~~~~~~~~~~~~l~~~~l~   73 (109)
                      ||||++.+.  .+.++|+||++++ .++++.|..||....... ....+.   ......  ..+...+.++.+|+.+||.
T Consensus       244 ~aPE~~~g~--~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~  321 (336)
T 2vuw_A          244 MDEDLFTGD--GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLN  321 (336)
T ss_dssp             TCSGGGCCC--SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGG
T ss_pred             cChhhhcCC--CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhc
Confidence            699998653  3789999998777 666777888885421101 111111   111111  1122356789999999999


Q ss_pred             hCCCCCCcHHHHh-cCcccC
Q 033880           74 RNPLNRPTAVKLL-DHPFVK   92 (109)
Q Consensus        74 ~~p~~R~~~~~~l-~~~~~~   92 (109)
                      .+     ++++++ +||||+
T Consensus       322 ~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          322 FS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             SS-----SHHHHHHHCGGGC
T ss_pred             cC-----CHHHHHhcCCCcC
Confidence            76     999999 999985

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.80  E-value=0.69  Score=26.90  Aligned_cols=20  Identities=25%  Similarity=0.229  Sum_probs=16.9

Q ss_pred             CCchHHHHHHHHHHHHHHhC
Q 033880           12 CNLAVDIWSLGCTVLEMATT   31 (109)
Q Consensus        12 ~~~~~d~ws~g~~~~~~~~g   31 (109)
                      .+.+.-|+|+|+++|..+.-
T Consensus       113 ~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A          113 CMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             SCHHHHHHHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHHHHHHhhc
Confidence            45778899999999999883

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	109
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-27
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-27
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-27
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-26
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-26
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-26
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-25
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-25
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-24
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-24
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-24
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-24
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-23
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-21
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-20
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-20
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-20
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-19
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-19
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-19
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-19
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-19
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-18
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-18
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-18
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-17
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-15
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-14
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-11

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-27
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-TIPDD 59
           MAPEV+         VDIWSLG   +EM   +PP+     + A++ I  +       P+ 
Sbjct: 183 MAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK 241

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
           LS   +DF+  CL  +   R +A +LL H F+K A PL  + L P ++ 
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL--SSLTPLIAA 288

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 3e-27
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           + PE+I+     +  VD+WSLG    E    KPP+          +I   +   T PD +
Sbjct: 171 LPPEMIEGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--FTFPDFV 227

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           ++  +D I   L+ NP  RP   ++L+HP++  
Sbjct: 228 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (244), Expect = 4e-27
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE + N    N   DIWSLGC + E+    PP++ +       KI   K    IP   
Sbjct: 181 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRY 238

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
           SDE  + I   L     +RP+  ++L++P +
Sbjct: 239 SDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (241), Expect = 1e-26
 Identities = 25/93 (26%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSKELPTIPDD 59
           MAPE+ +     + +VD+++ G  +LEMAT++ P+S+ +  A +++ + +  +  +    
Sbjct: 180 MAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV 237

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
              E K+ I  C+++N   R +   LL+H F +
Sbjct: 238 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.4 bits (242), Expect = 1e-26
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--D 58
           +APEV+      + AVD WS+G     +    PP+          +I  ++     P  D
Sbjct: 176 VAPEVLAQK-PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 234

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 109
           D+SD  KDFIR  ++++P  R T  + L HP++ G   L++ I      ++
Sbjct: 235 DISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQI 285

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.0 bits (241), Expect = 3e-26
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 1   MAPEVI--KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD 58
           MAPEVI   +    +  VD+WSLG T +E+A  KPP      ++A++ I  ++       
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 237

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
             S+  ++F+  CLQ+ P +RPT+  LL H FV    P   T++   + R
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP--PTVIMDLIQR 285

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 92.4 bits (229), Expect = 7e-25
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 1   MAPEVIK-----NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT 55
           +APE+I+     N  G    VD+WS G  +  +    PP+   + +  +  I +      
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 235

Query: 56  IP--DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            P  DD SD  KD +   L   P  R TA + L HPF +
Sbjct: 236 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 8e-25
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-IGNSKELPTIPDD 59
           +APE++K        VD+WS G  +  M   + PW Q       +      K        
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK 231

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
           +       +   L  NP  R T   +    +  
Sbjct: 232 IDSAPLALLHKILVENPSARITIPDIKKDRWYN 264

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 1e-24
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 1   MAPEVI----KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP-T 55
           MAPEV+          +   D+WSLG T++EMA  +PP  +   +  + KI  S+     
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 236

Query: 56  IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA--PLERTI 101
            P   S   KDF++ CL++N   R T  +LL HPFV   +  P+   I
Sbjct: 237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELI 284

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 92.8 bits (230), Expect = 2e-24
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 3/107 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
            APEV +         D+WS+G     + +   P+        +  +   +     +   
Sbjct: 192 AAPEVAEGK-PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 250

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
            +S++GKDFIR  L  +P  R T  + L+HP++       R    P 
Sbjct: 251 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS 297

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 4e-24
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 6/111 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
           +APE++ N     L  D+WS+G     + +   P+        +  +   N +       
Sbjct: 183 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA---APLERTILAPEL 106
           + S   KDFIR  L ++P  R T    L HP++K       L      P+ 
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQF 292

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 91.3 bits (226), Expect = 6e-24
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIPD 58
            APE++ +        D+W++G     + +   P++  + +  +  +   + +       
Sbjct: 195 AAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS 253

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
            +S E KDFI+  LQ+ P  R T    L+HP++KG
Sbjct: 254 SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 288

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 7e-24
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 8/93 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
             PE I+       +  +WSLG  + +M     P+   E +         +        +
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII--------RGQVFFRQRV 227

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
           S E +  IR CL   P +RPT  ++ +HP+++ 
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 2e-23
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPD 58
            APEV ++    + A D+WSLG  V  + +   P+        +  I N++         
Sbjct: 170 YAPEVHQHD-VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFK 228

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSR 108
           ++S E  DF+   L +   +R TA + L HP++K       T +   L  
Sbjct: 229 EISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKH 278

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 5e-23
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW------SQYEGVAAMFKIGNSKELP 54
           +APEV+      + + D+WSLG  +  +    PP+      +   G+    ++G  +   
Sbjct: 180 VAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 238

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTIL 102
               ++S+E K  IR  L+  P  R T  + ++HP++  +  + +T L
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 9e-23
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 9/99 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           ++PE++        + D+W+LGC + ++    PP+          KI   +     P+  
Sbjct: 177 VSPELLTEK-SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--YDFPEKF 233

Query: 61  SDEGKDFIRLCLQRNPLNRPTA------VKLLDHPFVKG 93
             + +D +   L  +   R           L  HPF + 
Sbjct: 234 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 3e-22
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE++      N +VD WS G  + EM   + P+   +       I      P  P  L
Sbjct: 170 IAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWL 226

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVK-LLDHPFVKG 93
             E KD +     R P  R      +  HP  + 
Sbjct: 227 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 9e-22
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 27/120 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 55
            APE++      + AVDIWSLGC   EM T +  +     +  +F+I  +   P      
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

Query: 56  ----------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
                                 +   L ++G+  +   L  +P  R +A   L HPF + 
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (203), Expect = 5e-21
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 1   MAPEVIK--NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK----ELP 54
           MAPEVI+  + +  +   D+++ G  + E+ T + P+S       +  +        +L 
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            +  +     K  +  CL++    RP   ++L  
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 1e-20
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 1   MAPEVIKNS-SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI--GNSKELPTIP 57
           MAP++++   SG + AVD WSLG  + E+ T   P++      +  +I     K  P  P
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 256

Query: 58  DDLSDEGKDFIRLCLQRNPLNRP-----TAVKLLDHPFVKG---AAPLERTILAP 104
            ++S   KD I+  L ++P  R       A ++ +H F +         + + AP
Sbjct: 257 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAP 311

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 2e-20
 Identities = 15/89 (16%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE ++     +   D+WS G  + E+ +  + P+ +      + ++    ++   PD 
Sbjct: 167 TAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-APDG 224

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
                 + ++ C   +   RP+ ++L + 
Sbjct: 225 CPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 2e-20
 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE +K     + A D W  G T+ EM T  + PW    G   + KI    E    P+D
Sbjct: 181 CAPESLKTR-TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
              +  + +  C    P +RPT V L D 
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.3 bits (200), Expect = 2e-20
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APEV+      N ++D WS G  + EM     P+     +    KI N++     P   
Sbjct: 168 IAPEVVSTK-PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFF 224

Query: 61  SDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG---AAPLERTILAP 104
           +++ KD +   + R+   R          + +HP+ K       L R I  P
Sbjct: 225 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETP 276

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 3e-20
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 6/94 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE I      +   D+WS G  + E  +  + P+   +G      +   + +   P  
Sbjct: 177 YAPECINYY-KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG-CPAG 234

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPF 90
              E  D + LC   +  NRP        L + +
Sbjct: 235 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.3 bits (197), Expect = 4e-20
 Identities = 13/101 (12%), Positives = 28/101 (27%), Gaps = 10/101 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------LP 54
            +          +   D+ SLG  ++       PW   +      K     E      + 
Sbjct: 180 ASINTHLGI-EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPFVK 92
            +      E   ++  C      ++P      +L  + F +
Sbjct: 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 7e-20
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE I      +   D+WS G T+ E  +  + P+ + +G   M  I   K +   P +
Sbjct: 179 YAPECINFR-KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME-CPPE 236

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPFVKGAAPLE 98
              E    +  C      +RP      + +   +   A+ +E
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 278

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 9e-20
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MA E ++         D+WS G  + E+ T   PP+           +   + L   P+ 
Sbjct: 201 MALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-QPEY 258

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
             D   + +  C       RP+  +L+  
Sbjct: 259 CPDPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 79.2 bits (194), Expect = 1e-19
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 27/119 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPD-- 58
            AP+V+  S   +  +DIWS+GC   EM    P +        + +I      P   +  
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226

Query: 59  -------------------------DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                     L + G D +   L+ +P  R TA + L+H + K
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 2e-19
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 26/118 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 55
            APE++  +    + VD+W++GC + E+    P       +  + +I  +   PT     
Sbjct: 167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 226

Query: 56  ---------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                I     D+  D I+     NP  R TA + L   +  
Sbjct: 227 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 2e-19
 Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 26/118 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI------------- 47
            APEV+  S      VD+WS+GC   EM   KP +     V  + KI             
Sbjct: 182 RAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 240

Query: 48  ------------GNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG 93
                        +++ +     D+ + GKD +  CL  NP  R +A   L HP+ + 
Sbjct: 241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 3e-19
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 29/122 (23%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN----------- 49
            APEVI N       VDIWS+GC + EM T K  +   + +  + +I             
Sbjct: 185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 244

Query: 50  ------------------SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
                              K+  +I  + S    + +   L  +   R TA + L HP+ 
Sbjct: 245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304

Query: 92  KG 93
           + 
Sbjct: 305 ES 306

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 3e-19
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 10/111 (9%)

Query: 2   APEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLS 61
               +   +    AVD W LG  + EM   + P+   +       I   +     P  LS
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLS 229

Query: 62  DEGKDFIRLCLQRNPLNRP-----TAVKLLDHPFVKG---AAPLERTILAP 104
            E K  +   L+++P  R       A ++++H F         +++ +L P
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP 280

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.5 bits (190), Expect = 4e-19
 Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPD 58
           ++PE  +     +   D++SLGC + E+ T +PP++    V+  ++      +P     +
Sbjct: 181 LSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239

Query: 59  DLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
            LS +    +   L +NP NR      +    V+
Sbjct: 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.1 bits (189), Expect = 1e-18
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 9/113 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKIGNSKELPTIPDD 59
           MAPEV++     + + D +SLGC + ++     P+ Q++                 +PD 
Sbjct: 172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVK-----LLDHPFVKG---AAPLERTILAP 104
            S E +  +   LQR+   R   +      + + PF +         +    P
Sbjct: 232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 284

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 1e-18
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 27/119 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 55
            APE+I  ++    ++D+WS GC + E+   +P +    GV  + +I      PT     
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248

Query: 56  ----------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                                        E        L+  P  R T ++   H F  
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 1e-18
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            +PEV  + S  +   D+WS G  + E+ +  K P+        +  I     L   P  
Sbjct: 169 ASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRL 226

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            S      +  C +  P +RP   +LL  
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 1e-18
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 29/121 (23%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI------------- 47
            APE++ NS G   ++DIWS+GC + EM + +P +     +  +  I             
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238

Query: 48  ----------------GNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
                            N      +  +   +  D +   L  NP  R    + L HP++
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 298

Query: 92  K 92
           +
Sbjct: 299 E 299

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 1e-18
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
             PEV+  S   +   DIW+ G  + E+ +  K P+ ++        I     L   P  
Sbjct: 168 SPPEVLMYS-KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY-RPHL 225

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            S++    +  C       RPT   LL +
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSN 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 2e-18
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE I       +  D+WS G  + E+ T  + P+        +  +     +   PD+
Sbjct: 177 TAPEAINYG-TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPDN 234

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPF 90
             +E    +RLC +  P +RPT      +L+  F
Sbjct: 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-18
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 43/136 (31%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWS------------------------ 36
           M+PE ++ +   ++  DIWS+G +++EMA  + P                          
Sbjct: 170 MSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228

Query: 37  ------------------QYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN 78
                                    +  I N           S E +DF+  CL +NP  
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288

Query: 79  RPTAVKLLDHPFVKGA 94
           R    +L+ H F+K +
Sbjct: 289 RADLKQLMVHAFIKRS 304

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 3e-18
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE         +  D+WS G  + E+ T  + P+        + ++     +P  P +
Sbjct: 181 TAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPE 238

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA---VKLLDHPFV 91
             +   D +  C ++ P  RPT       L+  F 
Sbjct: 239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 5e-18
 Identities = 23/105 (21%), Positives = 34/105 (32%), Gaps = 9/105 (8%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
            APE I        A D+WS G  + E+ T             + K  N       P D 
Sbjct: 180 TAPEAISYR-KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC 238

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPE 105
                  +  C Q+    RP    ++          L++ I AP+
Sbjct: 239 PSAIYQLMMQCWQQERARRPKFADIVSI--------LDKLIRAPD 275

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 5e-18
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 28/124 (22%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFK-------------- 46
             P+V+  +   + ++D+WS GC   E+A    P      V    K              
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227

Query: 47  --------------IGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 92
                            +  L  +   L+  G+D ++  L+ NP+ R +A + L HP+  
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

Query: 93  GAAP 96
              P
Sbjct: 288 DFCP 291

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 8e-18
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE +       +  D+WS G  + E+ +    P+      A  +K+  +      P  
Sbjct: 233 MAPESLFEG-IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 291

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            ++E    ++ C   +   RP+   L   
Sbjct: 292 ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 1e-17
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE I N      A D+W  G  + E+      P+   +    + +I N + LP +P +
Sbjct: 176 MAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 233

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
                   +  C   +P  RP   +L   
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 2e-17
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MAPE + +        D+WS G  + E+ T          V  +FK+         P + 
Sbjct: 204 MAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 262

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
           ++E    +R C    P  RPT  +L++ 
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 3e-17
 Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 29/136 (21%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN----------- 49
            APE++ N    N  VDIWS+GC + E+ T +  +   + +  +  I             
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 244

Query: 50  ------------------SKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 91
                                   +    +    D +   L  +   R TA + L H + 
Sbjct: 245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

Query: 92  KGAAPLERTILAPELS 107
                 +   +A    
Sbjct: 305 AQYHDPDDEPVADPYD 320

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 3e-17
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MA E + N S      D+WS G  + E+ +           A +++          P + 
Sbjct: 193 MAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 251

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            DE  D +R C +  P  RP+  ++L  
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.9 bits (178), Expect = 3e-17
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 11/117 (9%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           +APE+I +  G N AVD W+LG  + EMA   PP+   + +    KI + K     P   
Sbjct: 205 LAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261

Query: 61  SDEGKDFIRLCLQRNPLNR-----PTAVKLLDHPFVKG---AAPLERTILAPELSRL 109
           S + KD +R  LQ +   R          + +H +       A  +R + AP + + 
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF 318

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-16
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           MA E I +        D+WS G TV E+ T           + +  I    E    P   
Sbjct: 180 MALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 238

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
           + +    +  C   +  +RP   +L+  
Sbjct: 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 2e-16
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
           M+PE +K+        D+WS G  + E+AT      Q      + +      L   PD+ 
Sbjct: 202 MSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 260

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            D   + +R+C Q NP  RP+ ++++  
Sbjct: 261 PDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.8 bits (170), Expect = 3e-16
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
            APE I+       A D+WS G  + E+ +  + P+        +  I     LP  P D
Sbjct: 200 TAPEAIQYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP-PPMD 257

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
                   +  C Q++  +RP   ++++ 
Sbjct: 258 CPSALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 4e-16
 Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDL 60
            APE +  +   ++  D+W+ G  + E+AT          ++ ++++         P+  
Sbjct: 183 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 241

Query: 61  SDEGKDFIRLCLQRNPLNRPTAVKLLD 87
            ++  + +R C Q NP +RP+  ++  
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.7 bits (167), Expect = 8e-16
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           M PE I  +       D+W+ G  + E+ +    P+        ++ + +   +   P++
Sbjct: 209 MPPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-GNILACPEN 266

Query: 60  LSDEGKDFIRLCLQRNPLNRPTA---VKLLDH 88
              E  + +RLC  + P +RP+     ++L  
Sbjct: 267 CPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-15
 Identities = 20/122 (16%), Positives = 29/122 (23%), Gaps = 30/122 (24%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 55
             PE++         +D+W  GC + EM T  P          +  I       T     
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247

Query: 56  -------------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPF 90
                                              D I   L  +P  R  +   L+H F
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

Query: 91  VK 92
             
Sbjct: 308 FW 309

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 2e-15
 Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 36/129 (27%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPW----SQYEGVAAMFKIGNSKELPTI 56
             PE++ +    + ++D+WSLGC +  M   K P+      Y+ +  + K+  +++L   
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255

Query: 57  PD--------------------------------DLSDEGKDFIRLCLQRNPLNRPTAVK 84
            D                                 +S E  DF+   L+ +  +R TA +
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315

Query: 85  LLDHPFVKG 93
            ++HP+   
Sbjct: 316 AMEHPYFYT 324

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 9e-15
 Identities = 28/147 (19%), Positives = 44/147 (29%), Gaps = 42/147 (28%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 55
            APEVI    G    VDIWS+GC + EM   K  +   + +    K+      P      
Sbjct: 185 RAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243

Query: 56  -----------------------------------IPDDLSDEGKDFIRLCLQRNPLNRP 80
                                                   + + +D +   L  +P  R 
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303

Query: 81  TAVKLLDHPFVK-GAAPLERTILAPEL 106
           +    L HP++     P E     P++
Sbjct: 304 SVDDALQHPYINVWYDPAEVEAPPPQI 330

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 1e-14
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDD 59
           MAPE I +     +  D+WS G  + E+ +    P+   +      +          PD 
Sbjct: 203 MAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 261

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLLDH 88
            + E    +  C    P  RPT  +L++H
Sbjct: 262 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 3e-14
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMF-KIGNSKELPTIPDD 59
           MAPE I N        D+WS G  + E+ +          V + F K+         P+ 
Sbjct: 214 MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 272

Query: 60  LSDEGKDFIRLCLQRNPLNRPTAVKLL 86
              E  D ++ C   +PL RPT  +++
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIV 299

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 63.7 bits (154), Expect = 5e-14
 Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 7/93 (7%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA---AMFKIGNSKE---LP 54
           M+          +   D+ +LG   +       PW   +         +IG  K+   L 
Sbjct: 180 MSINTHLGR-EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 238

Query: 55  TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
            +     +E   ++           P    L  
Sbjct: 239 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.9 bits (154), Expect = 5e-14
 Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 47/145 (32%)

Query: 1   MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---------VAAMFKIGNS- 50
            +PEV+  +       DIWS  C + E+ T    +   EG         +A + ++    
Sbjct: 196 RSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 254

Query: 51  ------------------------------------KELPTIPDDLSDEGKDFIRLCLQR 74
                                                E      D + E  DF+   LQ 
Sbjct: 255 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL 314

Query: 75  NPLNRPTAVKLLDHPFVKGAAPLER 99
           +P  R  A  L++HP++K    +E 
Sbjct: 315 DPRKRADAGGLVNHPWLKDTLGMEE 339

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 4e-11
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 25/112 (22%)

Query: 1   MAPEVIKNSSGCNL-----AVDIWSLGCTVLEMATTKPPWSQYEGVAAMF---------- 45
           MAPEV+ +S            DI+++G    E+A        +E     +          
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238

Query: 46  -----KIGNSKELPTIPD-----DLSDEGKDFIRLCLQRNPLNRPTAVKLLD 87
                 +   K  P IP+     +        +R C   N   R TA+++  
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	109
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.92
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.91
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.89
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.88
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.88
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.87
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.87
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.87
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.86
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.85
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.85
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.84
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.84
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.84
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.84
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.83
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.83
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.83
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.83
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.82
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.82
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.81
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.81
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.78
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.71
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.64
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.6
d1kq8a_	75	HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norv	87.8

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.7e-27  Score=137.17  Aligned_cols=92  Identities=29%  Similarity=0.564  Sum_probs=78.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.....  ..+...++++++|+.+||..+|++||
T Consensus       171 ~APE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dp~~R~  247 (263)
T d2j4za1         171 LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRP  247 (263)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCHHHHcCCC-CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCc
Confidence            7999997655 89999999999999999999999987766655555544432  45677899999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++|+++||||+.++
T Consensus       248 t~~eil~hp~~~~~s  262 (263)
T d2j4za1         248 MLREVLEHPWITANS  262 (263)
T ss_dssp             CHHHHHTCHHHHHHC
T ss_pred             CHHHHHcCcCcCCcC
Confidence            999999999997643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.4e-26  Score=136.02  Aligned_cols=98  Identities=31%  Similarity=0.528  Sum_probs=80.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.........+......  .+.+...++++.+|+.+||..+|++
T Consensus       176 ~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  254 (307)
T d1a06a_         176 VAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK  254 (307)
T ss_dssp             SCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred             cCcHHHcCCC-CCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhH
Confidence            7999997655 899999999999999999999999877665555555444332  2334568899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCCccc
Q 033880           79 RPTAVKLLDHPFVKGAAPLER   99 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~~~~   99 (109)
                      ||+++|+++||||++.....+
T Consensus       255 R~s~~eil~hp~~~~~~~~~~  275 (307)
T d1a06a_         255 RFTCEQALQHPWIAGDTALDK  275 (307)
T ss_dssp             SCCHHHHHHSTTTTSSCCCCC
T ss_pred             CcCHHHHhcCHhhCCCCcccc
Confidence            999999999999987655444

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-25  Score=133.09  Aligned_cols=95  Identities=36%  Similarity=0.586  Sum_probs=77.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+..... ....+..++..+++|+.+||..+|++|
T Consensus       183 ~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  261 (293)
T d1yhwa1         183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR  261 (293)
T ss_dssp             CCHHHHSSSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTS
T ss_pred             cChhhhcCCC-CCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHC
Confidence            7999997655 89999999999999999999999987766555544433322 223456788999999999999999999


Q ss_pred             CcHHHHhcCcccCCCCC
Q 033880           80 PTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~~~   96 (109)
                      |+++|+++||||+...+
T Consensus       262 ~s~~eil~Hp~~~~~~~  278 (293)
T d1yhwa1         262 GSAKELLQHQFLKIAKP  278 (293)
T ss_dssp             CCHHHHTTCGGGGGCCC
T ss_pred             cCHHHHhcCHhhCCCCC
Confidence            99999999999986543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=131.79  Aligned_cols=96  Identities=33%  Similarity=0.536  Sum_probs=75.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCC-------------------------CCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSK-------------------------ELPT   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------------~~~~   55 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+......+..+....                         ....
T Consensus       182 ~APE~~~~~~-y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
T d1blxa_         182 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  260 (305)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             cCcchhcCCC-CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhh
Confidence            6999987655 9999999999999999999999998776554443321100                         0011


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 ~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                      .....+..+.+|+.+||..+|++||+++|+++||||+.....
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~  302 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  302 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhh
Confidence            234568899999999999999999999999999999987543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=130.48  Aligned_cols=89  Identities=33%  Similarity=0.594  Sum_probs=74.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+.......+.... .+..+...++++.+|+.+||..+|++||
T Consensus       181 ~APE~l~~~~-~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~s~~l~~li~~~L~~dp~~Rp  258 (269)
T d2java1         181 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRYSDELNEIITRMLNLKDYHRP  258 (269)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCHHHHcCCC-CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-CCCCCcccCHHHHHHHHHHcCCChhHCc
Confidence            7999996655 8999999999999999999999998776555544444333 3345677899999999999999999999


Q ss_pred             cHHHHhcCccc
Q 033880           81 TAVKLLDHPFV   91 (109)
Q Consensus        81 ~~~~~l~~~~~   91 (109)
                      +++|+++|||+
T Consensus       259 s~~ell~hp~i  269 (269)
T d2java1         259 SVEEILENPLI  269 (269)
T ss_dssp             CHHHHHTSTTC
T ss_pred             CHHHHHhCCcC
Confidence            99999999995

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=130.03  Aligned_cols=90  Identities=28%  Similarity=0.490  Sum_probs=72.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh-CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG-NSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+ . ++.++|+||+||++|+|++|..||.+........... .....+..+...++++++++.+||..+|++|
T Consensus       180 ~aPE~~~~-~-~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  257 (270)
T d1t4ha_         180 MAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER  257 (270)
T ss_dssp             CCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred             cCHHHhCC-C-CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHC
Confidence            79998854 4 8999999999999999999999998665444443333 3322223445678899999999999999999


Q ss_pred             CcHHHHhcCcccC
Q 033880           80 PTAVKLLDHPFVK   92 (109)
Q Consensus        80 ~~~~~~l~~~~~~   92 (109)
                      |+++|+++||||+
T Consensus       258 ~s~~ell~Hp~fk  270 (270)
T d1t4ha_         258 YSIKDLLNHAFFQ  270 (270)
T ss_dssp             CCHHHHHTSGGGC
T ss_pred             cCHHHHhCCcccC
Confidence            9999999999996

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.8e-25  Score=129.06  Aligned_cols=94  Identities=20%  Similarity=0.275  Sum_probs=73.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHH-HHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAM-FKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+..+++.++|+||+||++|+|++|..||......... ............+...+.++.+|+.+||..+|++|
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  251 (271)
T d1nvra_         172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR  251 (271)
T ss_dssp             SCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence            79999977665678899999999999999999999765433222 22333322223345678999999999999999999


Q ss_pred             CcHHHHhcCcccCCC
Q 033880           80 PTAVKLLDHPFVKGA   94 (109)
Q Consensus        80 ~~~~~~l~~~~~~~~   94 (109)
                      |+++++++||||+..
T Consensus       252 ~t~~eil~hpwf~~~  266 (271)
T d1nvra_         252 ITIPDIKKDRWYNKP  266 (271)
T ss_dssp             CCHHHHTTCTTTTCC
T ss_pred             cCHHHHhcCHhhCcC
Confidence            999999999999743

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-25  Score=131.09  Aligned_cols=92  Identities=22%  Similarity=0.463  Sum_probs=77.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.....  ..+...++++++|+.+||..+|++|+
T Consensus       177 ~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~  253 (288)
T d1uu3a_         177 VSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--DFPEKFFPKARDLVEKLLVLDATKRL  253 (288)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCTTCCHHHHHHHHTTSCSSGGGST
T ss_pred             cCceeeccCC-CCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCc
Confidence            7999997665 89999999999999999999999988766655555554432  45678899999999999999999999


Q ss_pred             cHHH------HhcCcccCCCC
Q 033880           81 TAVK------LLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~------~l~~~~~~~~~   95 (109)
                      +++|      +++||||++..
T Consensus       254 t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         254 GCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             TSGGGTCHHHHHTSGGGTTCC
T ss_pred             CHHHHcCCHHHHcCCccCCCC
Confidence            9987      57899999874

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-24  Score=130.36  Aligned_cols=91  Identities=27%  Similarity=0.444  Sum_probs=77.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+.......+....  ...|...+.++++|+.+||..+|++|+
T Consensus       172 ~aPE~~~~~~-y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~~L~~dP~~R~  248 (337)
T d1o6la_         172 LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             CCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             hhhhhccCCC-CChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC--CCCCccCCHHHHHHHHhhccCCchhhc
Confidence            7999997765 8999999999999999999999998876655554444443  245778999999999999999999999


Q ss_pred             c-----HHHHhcCcccCCC
Q 033880           81 T-----AVKLLDHPFVKGA   94 (109)
Q Consensus        81 ~-----~~~~l~~~~~~~~   94 (109)
                      +     ++++++||||++.
T Consensus       249 ~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         249 GGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TCSTTTHHHHHTSGGGTTC
T ss_pred             ccccccHHHHHcCcccccC
Confidence            5     8999999999875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=129.08  Aligned_cols=97  Identities=23%  Similarity=0.325  Sum_probs=74.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------CC----
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------PT----   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~----   55 (109)
                      ||||++.....|+.++|+||+||++|+|++|..||.+....+.+..+......                     +.    
T Consensus       167 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (299)
T d1ua2a_         167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH  246 (299)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred             ccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChH
Confidence            68998876656899999999999999999999999877655544332210000                     00    


Q ss_pred             -CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCc
Q 033880           56 -IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL   97 (109)
Q Consensus        56 -~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   97 (109)
                       .....+.++.+|+.+||..||++|||++|+++||||+.....
T Consensus       247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         247 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  289 (299)
T ss_dssp             HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             HhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCC
Confidence             012457889999999999999999999999999999865433

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=4.6e-25  Score=131.18  Aligned_cols=95  Identities=36%  Similarity=0.603  Sum_probs=77.9

Q ss_pred             CCCcceec--CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKN--SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~--~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+  ...|+.++|+||+||++|++++|..||.+.........+.........+...+..+.+|+.+||..+|++
T Consensus       178 ~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  257 (309)
T d1u5ra_         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD  257 (309)
T ss_dssp             CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhH
Confidence            79999863  2348899999999999999999999998776666665555444433345567899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||+++++++||||....
T Consensus       258 Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         258 RPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             SCCHHHHTTCHHHHSCC
T ss_pred             CcCHHHHHhCHHhcCCC
Confidence            99999999999997643

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1e-24  Score=131.56  Aligned_cols=92  Identities=30%  Similarity=0.450  Sum_probs=77.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.....  ..+...++++.+++.+||..+|++|+
T Consensus       205 ~APE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~kR~  281 (350)
T d1rdqe_         205 LAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV--RFPSHFSSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTCCHHHHHHHHHHSCSCTTTCT
T ss_pred             CCHHHHcCCC-CCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC--CCCccCCHHHHHHHHHHhhhCHHhcc
Confidence            7999997655 89999999999999999999999988766655555544433  44677899999999999999999995


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++||||++..
T Consensus       282 ~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         282 GNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             TSSTTTTHHHHTSGGGTTCC
T ss_pred             ccccccHHHHHcCccccCCC
Confidence                 899999999998764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.9e-25  Score=128.89  Aligned_cols=95  Identities=37%  Similarity=0.617  Sum_probs=76.5

Q ss_pred             CCCcceec----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHhhhC
Q 033880            1 MAPEVIKN----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRLCLQRN   75 (109)
Q Consensus         1 ~apE~~~~----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~   75 (109)
                      ||||++..    ...|+.++|+||+||++|+|++|..||.+.........+..... ....+...+.++++|+.+||..+
T Consensus       177 ~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d  256 (288)
T d2jfla1         177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN  256 (288)
T ss_dssp             CCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSS
T ss_pred             CCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCC
Confidence            68998742    23488999999999999999999999988766666555444332 12335568899999999999999


Q ss_pred             CCCCCcHHHHhcCcccCCCC
Q 033880           76 PLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        76 p~~R~~~~~~l~~~~~~~~~   95 (109)
                      |++||+++|+++||||+...
T Consensus       257 p~~R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         257 VDARWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             TTTSCCHHHHTTSGGGCCCC
T ss_pred             hhHCcCHHHHhcCcccCCCC
Confidence            99999999999999998643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.4e-24  Score=129.43  Aligned_cols=92  Identities=25%  Similarity=0.433  Sum_probs=77.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.+.......+.....  ..+...+.++.+++.+||..+|.+|+
T Consensus       168 ~APE~l~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dp~~R~  244 (316)
T d1fota_         168 IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL--RFPPFFNEDVKDLLSRLITRDLSQRL  244 (316)
T ss_dssp             CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTCT
T ss_pred             cCHHHHcCCC-CCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhhCHHhcc
Confidence            7999987655 89999999999999999999999988766665555544433  45677899999999999999999996


Q ss_pred             -----cHHHHhcCcccCCCC
Q 033880           81 -----TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 -----~~~~~l~~~~~~~~~   95 (109)
                           +++++++||||++..
T Consensus       245 ~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         245 GNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             TSSTTTTHHHHTSGGGSSCC
T ss_pred             ccchhhHHHHHcCcccccCC
Confidence                 899999999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.9e-25  Score=132.07  Aligned_cols=92  Identities=26%  Similarity=0.454  Sum_probs=77.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.........+....  +..+...+..+.+|+.+||..+|++||
T Consensus       170 ~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~~L~~dP~~R~  246 (320)
T d1xjda_         170 IAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKRL  246 (320)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHSCSSGGGSB
T ss_pred             CCHHHHcCCC-CCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCccCCHHHHHHHHHhcccCCCCCc
Confidence            6899997655 8999999999999999999999998876655554444332  355677899999999999999999999


Q ss_pred             cHH-HHhcCcccCCCC
Q 033880           81 TAV-KLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~-~~l~~~~~~~~~   95 (109)
                      ++. ++++||||++..
T Consensus       247 s~~~~l~~hpff~~~~  262 (320)
T d1xjda_         247 GVRGDIRQHPLFREIN  262 (320)
T ss_dssp             TTBSCGGGSGGGTTCC
T ss_pred             CHHHHHHhCchhccCC
Confidence            996 899999998753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.2e-25  Score=130.13  Aligned_cols=93  Identities=25%  Similarity=0.401  Sum_probs=76.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.........+.......  ..+...+..+.+|+.+||..+|++
T Consensus       183 ~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  261 (293)
T d1jksa_         183 VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK  261 (293)
T ss_dssp             CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG
T ss_pred             cCHHHHcCCC-CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhH
Confidence            6999997654 8999999999999999999999998876666555554443221  123567889999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||+++++++||||+..
T Consensus       262 R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         262 RMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             SCCHHHHHHSTTTCC-
T ss_pred             CcCHHHHhcCcccCCC
Confidence            9999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=3e-24  Score=130.09  Aligned_cols=94  Identities=24%  Similarity=0.431  Sum_probs=75.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAA--MFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.....|+.++|+||+||++|+|++|..||.+......  .... ........+..+++.+.+|+.+||..+|++
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  250 (364)
T d1omwa3         172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTMAVELPDSFSPELRSLLEGLLQRDVNR  250 (364)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH-SSSCCCCCCSSSCHHHHHHHHHHTCSSTTT
T ss_pred             chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cccCCCCCCCCCCHHHHHHHHHHcccCHHH
Confidence            7999987555589999999999999999999999976543222  2222 222233456788999999999999999999


Q ss_pred             CCc-----HHHHhcCcccCCCC
Q 033880           79 RPT-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~-----~~~~l~~~~~~~~~   95 (109)
                      |++     ++++++||||++..
T Consensus       251 R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         251 RLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             STTTSSSTHHHHHTSGGGTTCC
T ss_pred             hCCCcccCHHHHHcCccccCCC
Confidence            998     79999999999753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=1.7e-24  Score=130.71  Aligned_cols=94  Identities=24%  Similarity=0.464  Sum_probs=77.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+......+..+......  ...+...+.++.+|+.+||..+|++
T Consensus       195 ~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  273 (352)
T d1koba_         195 AAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK  273 (352)
T ss_dssp             CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             cCHHHHcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence            6899986655 899999999999999999999999887766665554443322  2234568899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCC
Q 033880           79 RPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~   95 (109)
                      ||+++++++||||++..
T Consensus       274 R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         274 RLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             SCCHHHHHTSTTTSSCC
T ss_pred             CcCHHHHhcCHhhCCCc
Confidence            99999999999998753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.90  E-value=1.4e-24  Score=130.91  Aligned_cols=95  Identities=24%  Similarity=0.409  Sum_probs=77.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+.+....+..+......  .......+..+++|+.+||..+|++
T Consensus       192 ~aPEv~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  270 (350)
T d1koaa2         192 AAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT  270 (350)
T ss_dssp             CCHHHHHTCC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGG
T ss_pred             cCHHHHcCCC-CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence            7999987655 899999999999999999999999877666555554433321  1223457899999999999999999


Q ss_pred             CCcHHHHhcCcccCCCCC
Q 033880           79 RPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~~~   96 (109)
                      ||+++++++||||+....
T Consensus       271 R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         271 RMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             SCCHHHHHHSTTTSCTTC
T ss_pred             CcCHHHHhcCcccCCCCC
Confidence            999999999999986543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.8e-24  Score=125.92  Aligned_cols=87  Identities=26%  Similarity=0.475  Sum_probs=72.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+..+++.++|+||+||++|+|++|..||.+.+.      +....  ...+...++++.+|+.+||..+|++||
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~~~--~~~~~~~s~~~~~li~~~L~~dp~~R~  247 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQ--VFFRQRVSSECQHLIRWCLALRPSDRP  247 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCC--CCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH------Hhhcc--cCCCCCCCHHHHHHHHHHccCCHhHCc
Confidence            6899987666567889999999999999999999976432      11111  134567899999999999999999999


Q ss_pred             cHHHHhcCcccCCCC
Q 033880           81 TAVKLLDHPFVKGAA   95 (109)
Q Consensus        81 ~~~~~l~~~~~~~~~   95 (109)
                      +++|+++||||+...
T Consensus       248 s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         248 TFEEIQNHPWMQDVL  262 (273)
T ss_dssp             CHHHHHTSGGGSSCC
T ss_pred             CHHHHhcCHhhCCCC
Confidence            999999999998754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-23  Score=125.16  Aligned_cols=93  Identities=29%  Similarity=0.527  Sum_probs=69.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---------------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---------------------------------   47 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---------------------------------   47 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|+.||.+.+........                                 
T Consensus       170 ~APEvl~~~~-y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (322)
T d1s9ja_         170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPM  248 (322)
T ss_dssp             CCHHHHHCSC-CCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCC
T ss_pred             cCchHHcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccch
Confidence            7999997765 999999999999999999999999754322110000                                 


Q ss_pred             --------hCCCCCCCCC-CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           48 --------GNSKELPTIP-DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        48 --------~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                              ......+..+ ...+.++.+|+.+||..||++||+++|+++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         249 AIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             CHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             hHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence                    0000111111 2356889999999999999999999999999999854

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=3.4e-23  Score=121.52  Aligned_cols=93  Identities=30%  Similarity=0.438  Sum_probs=73.9

Q ss_pred             CCCcceec-----CCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhh
Q 033880            1 MAPEVIKN-----SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQ   73 (109)
Q Consensus         1 ~apE~~~~-----~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~   73 (109)
                      +|||.+.+     ...++.++|+||+||++|+|++|..||.+.........+.......  ......++++++|+.+||.
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  255 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV  255 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred             CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcc
Confidence            46776642     2347889999999999999999999999877666555544433322  2234689999999999999


Q ss_pred             hCCCCCCcHHHHhcCcccCC
Q 033880           74 RNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        74 ~~p~~R~~~~~~l~~~~~~~   93 (109)
                      .+|++||+++++++||||+.
T Consensus       256 ~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         256 VQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             SSGGGSCCHHHHTTSGGGCT
T ss_pred             CChhHCcCHHHHHcCHHHHH
Confidence            99999999999999999975

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.8e-23  Score=125.49  Aligned_cols=95  Identities=25%  Similarity=0.396  Sum_probs=70.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---h-CCCCCCC--CCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---G-NSKELPT--IPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---~-~~~~~~~--~~~~~~~~~~~l~~~~l~~   74 (109)
                      ||||++.+.. |+.++|+||+||++|+|++|..||.+.........+   . ......+  .+...++++.+|+.+||..
T Consensus       180 ~aPE~~~~~~-y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  258 (335)
T d2ozaa1         180 VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT  258 (335)
T ss_dssp             CCCCCCCGGG-GSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCS
T ss_pred             CCcHHHcCCC-CCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccC
Confidence            7999987655 899999999999999999999999765433322211   1 1111011  1124688999999999999


Q ss_pred             CCCCCCcHHHHhcCcccCCCCC
Q 033880           75 NPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        75 ~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      +|++||++.++++||||.....
T Consensus       259 dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         259 EPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             STTTSCCHHHHHHSHHHHTTTS
T ss_pred             ChhHCcCHHHHHcCHHhhCCCC
Confidence            9999999999999999976543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=5.9e-23  Score=120.86  Aligned_cols=93  Identities=27%  Similarity=0.477  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC---------------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL---------------------------   53 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------   53 (109)
                      +|||.+.+...++.++|+||+||+++++++|+.||.+.+.......+......                           
T Consensus       167 ~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T d1ob3a_         167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW  246 (286)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred             hhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcch
Confidence            57888876666899999999999999999999999876554443332110000                           


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCC
Q 033880           54 PTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKG   93 (109)
Q Consensus        54 ~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   93 (109)
                      .......+..+.+|+.+||..||++||+++|+++||||+.
T Consensus       247 ~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            0113446788999999999999999999999999999973

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.7e-23  Score=120.58  Aligned_cols=96  Identities=29%  Similarity=0.535  Sum_probs=72.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCC-------------------CC------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL-------------------PT------   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~------   55 (109)
                      +|||++.....++.++|+||+||++|+|++|..||.+.+.......+......                   +.      
T Consensus       169 ~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (298)
T d1gz8a_         169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF  248 (298)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCH
T ss_pred             eehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccch
Confidence            58898776665789999999999999999999999876655444332110000                   00      


Q ss_pred             --CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 --IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                        .....+.++++|+.+||..+|++||+++|+++||||+....
T Consensus       249 ~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             HHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             hhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence              01245688999999999999999999999999999987644

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.1e-23  Score=124.73  Aligned_cols=87  Identities=21%  Similarity=0.286  Sum_probs=73.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|+|++ |..||.+......+..+......+..+..++..+++|+.+||..+|++|
T Consensus       233 ~aPE~l~~~~-~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~R  311 (325)
T d1rjba_         233 MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKR  311 (325)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CChHHHcCCC-CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence            7999987655 8999999999999999997 8999987665555555554544556678889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++|
T Consensus       312 Pt~~ei~~~  320 (325)
T d1rjba_         312 PSFPNLTSF  320 (325)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.9e-22  Score=121.40  Aligned_cols=96  Identities=29%  Similarity=0.408  Sum_probs=73.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCC-----------------------------C
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNS-----------------------------K   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-----------------------------~   51 (109)
                      +|||++.+...++.++|+||+||++++|++|..||.+.+...........                             .
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (346)
T d1cm8a_         185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK  264 (346)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCC
T ss_pred             cCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccccc
Confidence            68999876666889999999999999999999999876544333221110                             0


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           52 ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        52 ~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                      .........++.+.+|+.+||..+|++||+++++++||||+....
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             chHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence            001123456789999999999999999999999999999987543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=121.19  Aligned_cols=94  Identities=21%  Similarity=0.293  Sum_probs=69.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC--CCCCCCCC---------------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN--SKELPTIP---------------------   57 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~---------------------   57 (109)
                      +|||++.+...++.++|+||+||+++++++|+.||.+.........+..  ....+...                     
T Consensus       188 ~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T d3blha1         188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  267 (318)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBC
T ss_pred             hhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhccccccccc
Confidence            6899887665689999999999999999999999987654444332211  00000000                     


Q ss_pred             -------CCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           58 -------DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        58 -------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                             ...+..+.+|+.+||..+|++|++++|+++||||+..
T Consensus       268 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             chhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                   0125667899999999999999999999999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.4e-23  Score=122.85  Aligned_cols=95  Identities=29%  Similarity=0.496  Sum_probs=71.0

Q ss_pred             CCCcceecCC-CCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhh--CCCCCCCCCCCCCHHHHHHHHHHhhhCCC
Q 033880            1 MAPEVIKNSS-GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIG--NSKELPTIPDDLSDEGKDFIRLCLQRNPL   77 (109)
Q Consensus         1 ~apE~~~~~~-~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   77 (109)
                      ++||.+.... .++.++||||+||++|+|++|..||.+.........+.  .....+..+...+..+.+|+.+||..+|+
T Consensus       197 ~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~  276 (322)
T d1vzoa_         197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPK  276 (322)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             chhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHH
Confidence            5788776433 47889999999999999999999997654332221111  11122345677899999999999999999


Q ss_pred             CCCc-----HHHHhcCcccCCCC
Q 033880           78 NRPT-----AVKLLDHPFVKGAA   95 (109)
Q Consensus        78 ~R~~-----~~~~l~~~~~~~~~   95 (109)
                      +|++     ++|+++||||++..
T Consensus       277 ~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         277 KRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             GSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HcCCCCcccHHHHHcCHhhcCCC
Confidence            9994     89999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-23  Score=124.48  Aligned_cols=93  Identities=28%  Similarity=0.371  Sum_probs=74.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT--IPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      +|||.+.+.. ++.++|+||+||++|+|++|..||.+.........+.......+  .+..++.++++|+.+||..+|++
T Consensus       170 ~ape~~~~~~-~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  248 (321)
T d1tkia_         170 YAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKS  248 (321)
T ss_dssp             SCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG
T ss_pred             ccchhccCCC-CCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhH
Confidence            5788775544 89999999999999999999999988776666555544432211  12357899999999999999999


Q ss_pred             CCcHHHHhcCcccCCC
Q 033880           79 RPTAVKLLDHPFVKGA   94 (109)
Q Consensus        79 R~~~~~~l~~~~~~~~   94 (109)
                      ||+++++++||||+..
T Consensus       249 R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         249 RMTASEALQHPWLKQK  264 (321)
T ss_dssp             SCCHHHHHHSHHHHSC
T ss_pred             CcCHHHHhcCHhhccC
Confidence            9999999999999754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.3e-22  Score=120.53  Aligned_cols=94  Identities=23%  Similarity=0.414  Sum_probs=72.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC------------------CCCCC--------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------------SKELP--------   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~------------------~~~~~--------   54 (109)
                      +|||.+.+...++.++|+||+||++|++++|..||........+..+..                  ....+        
T Consensus       189 ~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (350)
T d1q5ka_         189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT  268 (350)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGG
T ss_pred             cChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchh
Confidence            5788876655689999999999999999999999987655444332211                  00000        


Q ss_pred             -CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           55 -TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        55 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                       ......++++.+|+.+||..||++||++.|+++||||+..
T Consensus       269 ~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             GTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence             0123467899999999999999999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.6e-22  Score=119.00  Aligned_cols=98  Identities=24%  Similarity=0.406  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC------------------------CCCC--C
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN------------------------SKEL--P   54 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~------------------------~~~~--~   54 (109)
                      +|||++.....++.++|+||+||++++|++|..||.+............                        ....  .
T Consensus       179 ~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (345)
T d1pmea_         179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV  258 (345)
T ss_dssp             CCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred             chHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCC
Confidence            6899886655688999999999999999999999977544333222110                        0000  0


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCCcc
Q 033880           55 ---TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLE   98 (109)
Q Consensus        55 ---~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~   98 (109)
                         ......+.++.+|+.+||..||++||+++++++||||+......
T Consensus       259 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~  305 (345)
T d1pmea_         259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS  305 (345)
T ss_dssp             CHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             CHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCc
Confidence               01234577899999999999999999999999999999665443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-22  Score=118.87  Aligned_cols=89  Identities=22%  Similarity=0.361  Sum_probs=72.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..+..++..+.+++.+||..+|++|
T Consensus       177 ~APE~l~~~~-~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~~dp~~R  254 (277)
T d1xbba_         177 YAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-ERMGCPAGCPREMYDLMNLCWTYDVENR  254 (277)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             cCchhhcCCC-CCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHHHHHHHcCCCHhHC
Confidence            6899987655 8999999999999999998 89999877655544444433 3445677889999999999999999999


Q ss_pred             CcHHHHh---cCccc
Q 033880           80 PTAVKLL---DHPFV   91 (109)
Q Consensus        80 ~~~~~~l---~~~~~   91 (109)
                      |++++++   ++.|+
T Consensus       255 Ps~~~i~~~L~~~~~  269 (277)
T d1xbba_         255 PGFAAVELRLRNYYY  269 (277)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHhhCHHh
Confidence            9999984   45554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.9e-22  Score=119.99  Aligned_cols=96  Identities=24%  Similarity=0.326  Sum_probs=72.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC------------------------CCC-
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE------------------------LPT-   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------------~~~-   55 (109)
                      +|||.+.+...++.++|+||+||++|+|++|..||.+.+.......+.....                        .+. 
T Consensus       185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  264 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred             cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence            5888876666578999999999999999999999987654433322211000                        000 


Q ss_pred             ----CCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCCC
Q 033880           56 ----IPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAP   96 (109)
Q Consensus        56 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   96 (109)
                          .....+..+.+|+.+||..||++|++++|+++||||+....
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence                11346788999999999999999999999999999986543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.5e-22  Score=115.91  Aligned_cols=94  Identities=19%  Similarity=0.356  Sum_probs=73.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCC-CCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... ++.++||||+|+++|++++|..| +.+.........+... ..++.+..++..+++++.+||..+|++|
T Consensus       181 ~aPE~~~~~~-~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~R  258 (285)
T d1fmka3         181 TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEER  258 (285)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHHhCCC-CCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCCCCCcccCHHHHHHHHHHcccCHhHC
Confidence            6899987655 89999999999999999995555 4444444444444333 3345678889999999999999999999


Q ss_pred             CcHHHHhc--CcccCCCCC
Q 033880           80 PTAVKLLD--HPFVKGAAP   96 (109)
Q Consensus        80 ~~~~~~l~--~~~~~~~~~   96 (109)
                      |++++++.  ++||+...+
T Consensus       259 ps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         259 PTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             CCHHHHHHHHHTTTSCSCC
T ss_pred             cCHHHHHHHHhhhhcCCCC
Confidence            99999987  788876654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-22  Score=118.68  Aligned_cols=90  Identities=26%  Similarity=0.468  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... ++.++|+||+||++|++++| .+++...........+... ..+..+..++..+.+++.+||..+|++|
T Consensus       177 ~APE~~~~~~-~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~P~~R  254 (272)
T d1qpca_         177 TAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDR  254 (272)
T ss_dssp             SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHHhCCC-CCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCCCCcccChHHHHHHHHHHcCCCHhHC
Confidence            6899987655 89999999999999999995 4555554444444444333 3345577889999999999999999999


Q ss_pred             CcHHHHhc--CcccC
Q 033880           80 PTAVKLLD--HPFVK   92 (109)
Q Consensus        80 ~~~~~~l~--~~~~~   92 (109)
                      |+++++++  ++||.
T Consensus       255 pt~~ei~~~L~~~ft  269 (272)
T d1qpca_         255 PTFDYLRSVLEDFFT  269 (272)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHhhhhhh
Confidence            99999987  67775

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.4e-22  Score=115.34  Aligned_cols=86  Identities=23%  Similarity=0.350  Sum_probs=72.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||.+.+.. ++.++|+||+|+++|++++ |..||.+.........+... ..+..|...+..+.+|+.+||..+|++|
T Consensus       168 ~aPE~~~~~~-~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~R  245 (258)
T d1k2pa_         168 SPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADER  245 (258)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             CCcHHhcCCC-CCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-CCCCCcccccHHHHHHHHHHccCCHhHC
Confidence            6899987665 8999999999999999998 89999887665555545443 3345577889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++|
T Consensus       246 Pt~~eil~~  254 (258)
T d1k2pa_         246 PTFKILLSN  254 (258)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.1e-21  Score=114.30  Aligned_cols=95  Identities=24%  Similarity=0.448  Sum_probs=68.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCC-CchhHHHHHHhhC---C------------------------CC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWS-QYEGVAAMFKIGN---S------------------------KE   52 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~-~~~~~~~~~~~~~---~------------------------~~   52 (109)
                      +|||.+.....++.++|+||+||++++|++|+.||. +.+.......+..   .                        ..
T Consensus       168 ~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
T d1unla_         168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS  247 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCC
T ss_pred             hhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccch
Confidence            467777665557899999999999999999988864 3332222222110   0                        00


Q ss_pred             CCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           53 LPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        53 ~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                      ........+..+.+|+.+||..+|.+|||++|+++||||+...
T Consensus       248 ~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             hhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            0112334678899999999999999999999999999998643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6e-22  Score=115.96  Aligned_cols=85  Identities=32%  Similarity=0.533  Sum_probs=73.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|||++ |..||.+.+.......+......++.+..++..+.+++.+||..+|++|
T Consensus       181 ~aPE~~~~~~-~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  259 (273)
T d1u46a_         181 CAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR  259 (273)
T ss_dssp             CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHHHHhCCC-CCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHC
Confidence            6899887655 8999999999999999998 8999988777776666666655556677889999999999999999999


Q ss_pred             CcHHHHh
Q 033880           80 PTAVKLL   86 (109)
Q Consensus        80 ~~~~~~l   86 (109)
                      |++++++
T Consensus       260 Pt~~ei~  266 (273)
T d1u46a_         260 PTFVALR  266 (273)
T ss_dssp             CCHHHHH
T ss_pred             cCHHHHH
Confidence            9999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=2.9e-21  Score=114.32  Aligned_cols=86  Identities=21%  Similarity=0.344  Sum_probs=70.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... ++.++||||+||++||+++ |..||.+.........+.... .++.+..++..+.+++.+||..+|++|
T Consensus       200 ~aPE~~~~~~-~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~~P~~R  277 (299)
T d1jpaa_         200 TAPEAIQYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY-RLPPPMDCPSALHQLMLDCWQKDRNHR  277 (299)
T ss_dssp             SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             cCHHHHhcCC-CCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCCHhHC
Confidence            6899887655 8999999999999999998 899998776655555444443 334577889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       278 Ps~~ei~~~  286 (299)
T d1jpaa_         278 PKFGQIVNT  286 (299)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.9e-22  Score=114.91  Aligned_cols=86  Identities=23%  Similarity=0.362  Sum_probs=68.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|++++ |.++|...........+... ..+..+..++..+.+++.+||..+|++|
T Consensus       169 ~aPE~l~~~~-~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~p~~R  246 (263)
T d1sm2a_         169 ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR  246 (263)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CChHHhcCCC-CCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHccCCHhHC
Confidence            6899987655 9999999999999999999 56666655544444443333 2334567789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       247 ps~~~il~~  255 (263)
T d1sm2a_         247 PAFSRLLRQ  255 (263)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=9.8e-22  Score=115.20  Aligned_cols=88  Identities=20%  Similarity=0.372  Sum_probs=68.2

Q ss_pred             CCCcceecC--CCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCC-C---CCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNS--SGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-L---PTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~--~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      ||||++...  ..|+.++|+||+||++|++++|..||.+............... .   ...+..++..+.+++.+||..
T Consensus       173 ~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~  252 (276)
T d1uwha_         173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKK  252 (276)
T ss_dssp             CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCS
T ss_pred             CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCC
Confidence            799998632  2478999999999999999999999987654444333222221 1   224566889999999999999


Q ss_pred             CCCCCCcHHHHhcC
Q 033880           75 NPLNRPTAVKLLDH   88 (109)
Q Consensus        75 ~p~~R~~~~~~l~~   88 (109)
                      +|++||++++++++
T Consensus       253 dp~~RPt~~~il~~  266 (276)
T d1uwha_         253 KRDERPLFPQILAS  266 (276)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999865

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-21  Score=114.43  Aligned_cols=86  Identities=22%  Similarity=0.377  Sum_probs=71.4

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|+|++ |..||.+.........+.... .++.+..++..+.+|+.+||..+|++|
T Consensus       176 ~apE~l~~~~-~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~R  253 (273)
T d1mp8a_         176 MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRR  253 (273)
T ss_dssp             CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             chhhHhccCC-CCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCHhHC
Confidence            6899987655 8999999999999999998 889998776655554444443 345677899999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       254 ps~~ei~~~  262 (273)
T d1mp8a_         254 PRFTELKAQ  262 (273)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.8e-21  Score=113.56  Aligned_cols=85  Identities=24%  Similarity=0.331  Sum_probs=66.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCC-CCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPP-WSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|+++++..| +...........+ .....++.+..++..+.+++.+||..+|++|
T Consensus       180 ~APE~l~~~~-~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R  257 (283)
T d1mqba_         180 TAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPMDCPSAIYQLMMQCWQQERARR  257 (283)
T ss_dssp             SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred             cCHHHHccCC-CCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHH-hccCCCCCchhhHHHHHHHHHHHCcCCHhHC
Confidence            6999987655 99999999999999999995554 4444433333333 3334445677789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       258 Pt~~eil~  265 (283)
T d1mqba_         258 PKFADIVS  265 (283)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1e-21  Score=115.62  Aligned_cols=90  Identities=21%  Similarity=0.334  Sum_probs=73.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.... ++.++||||+||++||+++ |..||.+.........+..+ ..+..+..++.++.+++.+||..+|++|
T Consensus       179 ~aPE~~~~~~-~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~p~~R  256 (285)
T d1u59a_         179 YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-KRMECPPECPPELYALMSDCWIYKWEDR  256 (285)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             cChHHHhCCC-CCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCCHhHC
Confidence            6899987655 8999999999999999998 89999877655554444443 3345678899999999999999999999


Q ss_pred             CcHHHH---hcCcccC
Q 033880           80 PTAVKL---LDHPFVK   92 (109)
Q Consensus        80 ~~~~~~---l~~~~~~   92 (109)
                      |++.++   +++.|+.
T Consensus       257 Ps~~~i~~~L~~~~~~  272 (285)
T d1u59a_         257 PDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHH
Confidence            999988   4566654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.5e-22  Score=116.74  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=70.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|+|+++ ..||.+......+.........+..+...++++.+++.+||..+|++|
T Consensus       203 ~APE~l~~~~-~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  281 (299)
T d1ywna1         203 MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  281 (299)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cchhHhhcCC-CCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHC
Confidence            6999997655 89999999999999999985 567876654444444433334455677889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++++++|
T Consensus       282 pt~~eil~~  290 (299)
T d1ywna1         282 PTFSELVEH  290 (299)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.83  E-value=5e-21  Score=114.39  Aligned_cols=95  Identities=24%  Similarity=0.392  Sum_probs=69.6

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHh---------------hCCC-------------
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA-AMFKI---------------GNSK-------------   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~-~~~~~---------------~~~~-------------   51 (109)
                      +|||.+.+...++.++|+||+||+++++++|..||....... ....+               ....             
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T d3bqca1         196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS  275 (328)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCC
T ss_pred             cCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccc
Confidence            589988766668999999999999999999999986542211 11100               0000             


Q ss_pred             -------CCCCCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCCC
Q 033880           52 -------ELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAA   95 (109)
Q Consensus        52 -------~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   95 (109)
                             .........+.++.+|+.+||..+|++|++++|+++||||+.+.
T Consensus       276 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         276 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             CCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             ccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                   00001233678899999999999999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=3.1e-21  Score=113.62  Aligned_cols=86  Identities=20%  Similarity=0.375  Sum_probs=67.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRP   80 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   80 (109)
                      ||||++.+.. |+.++|+||+||++|++++|..|+..................+..+..++..+.+|+.+||..+|++||
T Consensus       183 ~aPE~~~~~~-~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  261 (287)
T d1opja_         183 TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP  261 (287)
T ss_dssp             CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cChHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCc
Confidence            6899987665 899999999999999999966554433333333333333444556778999999999999999999999


Q ss_pred             cHHHHhc
Q 033880           81 TAVKLLD   87 (109)
Q Consensus        81 ~~~~~l~   87 (109)
                      +++++++
T Consensus       262 s~~ei~~  268 (287)
T d1opja_         262 SFAEIHQ  268 (287)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.2e-21  Score=115.56  Aligned_cols=86  Identities=22%  Similarity=0.246  Sum_probs=69.8

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|++++ |..||.+.........+..+ ..++.+..++..+.+++.+||..+|++|
T Consensus       180 ~APE~l~~~~-~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~~dP~~R  257 (317)
T d1xkka_         180 MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLPQPPICTIDVYMIMVKCWMIDADSR  257 (317)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT-CCCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHHhcCC-CChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHHHHHHhCCCChhhC
Confidence            6899987765 8999999999999999998 88899876544443333333 3345577889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.++++|
T Consensus       258 Ps~~eil~~  266 (317)
T d1xkka_         258 PKFRELIIE  266 (317)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999865

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.3e-21  Score=118.09  Aligned_cols=93  Identities=25%  Similarity=0.379  Sum_probs=68.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhC----------------------CCC-CCC--
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGN----------------------SKE-LPT--   55 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~----------------------~~~-~~~--   55 (109)
                      +|||++.+.. ++.++|+||+||+++++++|..||.+.+.......+..                      ... ...  
T Consensus       185 ~aPE~l~~~~-~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T d2b1pa1         185 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCC
T ss_pred             cChhhhcCCC-CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccc
Confidence            6899987654 89999999999999999999999976543333222110                      000 000  


Q ss_pred             ---------C------CCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           56 ---------I------PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        56 ---------~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                               .      ....+.++.+|+.+||..+|++||+++|+++||||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                     0      00124567899999999999999999999999999863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.5e-21  Score=111.66  Aligned_cols=86  Identities=17%  Similarity=0.366  Sum_probs=70.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++||||+|+++|++++ |..||...........+.. ...+..+...++.+++++.+||..+|++|
T Consensus       167 ~aPE~l~~~~-~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         167 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CChHHHhCCC-CChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHcccCHhHC
Confidence            6899987655 8999999999999999998 7888877655555444433 34456678889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++.+++++
T Consensus       245 ps~~~l~~~  253 (262)
T d1byga_         245 PSFLQLREQ  253 (262)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998764

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.82  E-value=4.6e-21  Score=112.31  Aligned_cols=89  Identities=27%  Similarity=0.489  Sum_probs=69.2

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHhhhCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELP--TIPDDLSDEGKDFIRLCLQRNPLN   78 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~   78 (109)
                      ||||++.+.. ++.++|+||+||++|+|++|..||.+................+  ......+..+.+++.+||..+|++
T Consensus       181 ~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~  259 (277)
T d1o6ya_         181 LSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN  259 (277)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGG
T ss_pred             cCHHHHcCCC-CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhH
Confidence            7999987655 8999999999999999999999998876666555444333322  234568899999999999999999


Q ss_pred             CC-cHHHHhcCccc
Q 033880           79 RP-TAVKLLDHPFV   91 (109)
Q Consensus        79 R~-~~~~~l~~~~~   91 (109)
                      || +++++ .|+|.
T Consensus       260 R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         260 RYQTAAEM-RADLV  272 (277)
T ss_dssp             SCSSHHHH-HHHHH
T ss_pred             CHhHHHHH-HHHHH
Confidence            99 56655 44443

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=1.2e-20  Score=111.63  Aligned_cols=85  Identities=20%  Similarity=0.445  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCC-CCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTK-PPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+||++|++++|. .||.+.........+.... .+..+..++.++.+++.+||..+|++|
T Consensus       209 ~aPE~~~~~~-~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~R  286 (301)
T d1lufa_         209 MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADR  286 (301)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHHHHccCC-CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHC
Confidence            6899887655 999999999999999999974 6787776665555554443 445677889999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       287 Pt~~ev~~  294 (301)
T d1lufa_         287 PSFCSIHR  294 (301)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.7e-21  Score=112.66  Aligned_cols=86  Identities=24%  Similarity=0.395  Sum_probs=69.3

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCC-CCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTK-PPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.+.. ++.++|+||||+++|+|++|. +||.+.+.......+... ..+..+..+++.+.+|+.+||..+|++|
T Consensus       193 ~aPE~l~~~~-~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~R  270 (309)
T d1fvra_         193 MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYER  270 (309)
T ss_dssp             CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             cchHHhccCC-CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc-CCCCCCccCCHHHHHHHHHHcCCChhHC
Confidence            5899887655 899999999999999999965 577766555544444433 3345677889999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |++++++++
T Consensus       271 Ps~~eil~~  279 (309)
T d1fvra_         271 PSFAQILVS  279 (309)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.3e-20  Score=110.40  Aligned_cols=85  Identities=24%  Similarity=0.369  Sum_probs=70.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. |+.++|+||+|+++|++++ |..||.+.........+.. ...+..+..+++.+++++.+||+.+|.+|
T Consensus       204 ~aPE~l~~~~-y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~R  281 (299)
T d1fgka_         204 MAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQR  281 (299)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-TCCCCCCSSCCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhhHhcCCC-CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHc-CCCCCCCccchHHHHHHHHHHccCCHhHC
Confidence            6899887655 9999999999999999998 7888887665544444433 34455678889999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |++.++++
T Consensus       282 ps~~eil~  289 (299)
T d1fgka_         282 PTFKQLVE  289 (299)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999975

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-20  Score=112.42  Aligned_cols=86  Identities=19%  Similarity=0.252  Sum_probs=65.0

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV-AAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      +|||.+.... ++.++|+||+|+++|++++|..||...... .....+..+ ..+..+..++..+.+++.+||..+|++|
T Consensus       201 ~aPE~~~~~~-~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g-~~~~~p~~~~~~l~~li~~cl~~dP~~R  278 (311)
T d1r0pa_         201 MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWHPKAEMR  278 (311)
T ss_dssp             SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cChHHHhcCC-CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCcccCcHHHHHHHHHHcCCCHhHC
Confidence            5788886655 899999999999999999977776543322 222222322 3345577789999999999999999999


Q ss_pred             CcHHHHhcC
Q 033880           80 PTAVKLLDH   88 (109)
Q Consensus        80 ~~~~~~l~~   88 (109)
                      |+++|++++
T Consensus       279 Ps~~ei~~~  287 (311)
T d1r0pa_         279 PSFSELVSR  287 (311)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.7e-20  Score=111.52  Aligned_cols=86  Identities=26%  Similarity=0.454  Sum_probs=68.5

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMAT-TKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||++.+.. ++.++|+||+|+++|+|++ |.++|.+......+..+......+..+...+..+.+|+.+||..+|++|
T Consensus       214 ~aPE~~~~~~-~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~R  292 (311)
T d1t46a_         214 MAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR  292 (311)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHhcCCC-CCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHC
Confidence            6889886654 8999999999999999998 6666666555444444444444455567789999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       293 Ps~~~il~  300 (311)
T d1t46a_         293 PTFKQIVQ  300 (311)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=6.3e-21  Score=115.08  Aligned_cols=93  Identities=28%  Similarity=0.494  Sum_probs=63.7

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHH------HHHH---hhC------------------CC--
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVA------AMFK---IGN------------------SK--   51 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~------~~~~---~~~------------------~~--   51 (109)
                      +|||++.... ++.++|+||+||+++++++|+.||.......      ....   ...                  ..  
T Consensus       196 ~aPE~~~~~~-~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  274 (362)
T d1q8ya_         196 RSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL  274 (362)
T ss_dssp             CCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred             cChhhccccC-CCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchh
Confidence            6899887655 8999999999999999999999996432210      0000   000                  00  


Q ss_pred             --CCC---------------CCCCCCCHHHHHHHHHHhhhCCCCCCcHHHHhcCcccCCC
Q 033880           52 --ELP---------------TIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA   94 (109)
Q Consensus        52 --~~~---------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   94 (109)
                        ...               ......++.+.+|+.+||..||++|||++|+++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         275 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             hhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence              000               0011234668899999999999999999999999999854

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.7e-19  Score=106.97  Aligned_cols=85  Identities=27%  Similarity=0.513  Sum_probs=69.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATT-KPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNR   79 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   79 (109)
                      ||||.+.+.. ++.++|+||+|+++|+|++| ..||.+.........+.... .+..+..++..+.+++.+||..+|++|
T Consensus       202 ~aPe~l~~~~-~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~~P~~R  279 (308)
T d1p4oa_         202 MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMR  279 (308)
T ss_dssp             CCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCHHHHccCC-CCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC-CCCCcccchHHHHHHHHHHcCCChhHC
Confidence            6888887655 88999999999999999996 57887776666555554443 345577889999999999999999999


Q ss_pred             CcHHHHhc
Q 033880           80 PTAVKLLD   87 (109)
Q Consensus        80 ~~~~~~l~   87 (109)
                      |+++++++
T Consensus       280 Ps~~~il~  287 (308)
T d1p4oa_         280 PSFLEIIS  287 (308)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=2.4e-18  Score=101.58  Aligned_cols=91  Identities=14%  Similarity=0.205  Sum_probs=64.1

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHh---hC---CCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKI---GN---SKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      ||||++.+.. ++.++|+||+||++|++++|..||............   ..   ....+.....++.++.+++..||..
T Consensus       180 ~aPE~~~~~~-~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~  258 (299)
T d1ckia_         180 ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSL  258 (299)
T ss_dssp             CCHHHHTTBC-CCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHS
T ss_pred             cCHHHHhCCC-CCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccC
Confidence            6899887655 899999999999999999999999764332221111   00   0111112456789999999999999


Q ss_pred             CCCCCCcHHHH---hcCcccC
Q 033880           75 NPLNRPTAVKL---LDHPFVK   92 (109)
Q Consensus        75 ~p~~R~~~~~~---l~~~~~~   92 (109)
                      +|++||+++++   +++.|.+
T Consensus       259 ~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         259 RFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHHH
Confidence            99999998754   5566543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.64  E-value=7.7e-17  Score=94.91  Aligned_cols=85  Identities=15%  Similarity=0.162  Sum_probs=61.9

Q ss_pred             CCCcceecCCCCCchHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHhh---CCCCCCCCCCCCCHHHHHHHHHHhhh
Q 033880            1 MAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGV---AAMFKIG---NSKELPTIPDDLSDEGKDFIRLCLQR   74 (109)
Q Consensus         1 ~apE~~~~~~~~~~~~d~ws~g~~~~~~~~g~~p~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~l~~   74 (109)
                      ||||++.+.. ++.++|+||+|+++|++++|..||.+....   .....+.   ...........+++++.+++..|+..
T Consensus       180 ~aPE~~~~~~-~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~  258 (293)
T d1csna_         180 MSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL  258 (293)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred             cCHHHhcCCC-CChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcC
Confidence            7999987655 899999999999999999999999754321   1111111   11111112356788999999999999


Q ss_pred             CCCCCCcHHHHh
Q 033880           75 NPLNRPTAVKLL   86 (109)
Q Consensus        75 ~p~~R~~~~~~l   86 (109)
                      +|++||+++.+.
T Consensus       259 ~~~~rP~y~~l~  270 (293)
T d1csna_         259 AFDATPDYDYLQ  270 (293)
T ss_dssp             CTTCCCCHHHHH
T ss_pred             CcccCcCHHHHH
Confidence            999999877664

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-16  Score=93.18  Aligned_cols=87  Identities=29%  Similarity=0.345  Sum_probs=56.6

Q ss_pred             CCCcceecCC-----CCCchHHHHHHHHHHHHHHhCCCCCCCch--------------hHHHHHH-hhCCCCCCCCCCC-
Q 033880            1 MAPEVIKNSS-----GCNLAVDIWSLGCTVLEMATTKPPWSQYE--------------GVAAMFK-IGNSKELPTIPDD-   59 (109)
Q Consensus         1 ~apE~~~~~~-----~~~~~~d~ws~g~~~~~~~~g~~p~~~~~--------------~~~~~~~-~~~~~~~~~~~~~-   59 (109)
                      ||||++.+..     .++.++|+||+||++|++++|..|+....              ....... .......+..+.. 
T Consensus       179 ~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  258 (303)
T d1vjya_         179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW  258 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             CChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCccc
Confidence            6899875432     15678999999999999999977653211              1111111 1122221222221 


Q ss_pred             ----CCHHHHHHHHHHhhhCCCCCCcHHHHhc
Q 033880           60 ----LSDEGKDFIRLCLQRNPLNRPTAVKLLD   87 (109)
Q Consensus        60 ----~~~~~~~l~~~~l~~~p~~R~~~~~~l~   87 (109)
                          ....+.+++.+||..+|++||++.++++
T Consensus       259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         259 QSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                1235788999999999999999999875

>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Forkhead DNA-binding domain
domain: HFH-1 (HNF-3 forkhead homolog-1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.80  E-value=0.26  Score=22.28  Aligned_cols=37  Identities=19%  Similarity=0.314  Sum_probs=27.9

Q ss_pred             HHHHHHhhhCCCCCCcHHHHh-----cCcccCCCCCcccccc
Q 033880           66 DFIRLCLQRNPLNRPTAVKLL-----DHPFVKGAAPLERTIL  102 (109)
Q Consensus        66 ~l~~~~l~~~p~~R~~~~~~l-----~~~~~~~~~~~~~~~~  102 (109)
                      .|+...+...|++|.+.+||-     ..|||+......++.+
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~fpy~r~~~~gWkNSI   44 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSV   44 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGTCSCCHHHH
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhCcccccCCccchhHh
Confidence            567788888899999999974     3788887666555543