BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033881
         (109 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
           sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2
          Length = 283

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46  RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104

Query: 107 DTV 109
           DT+
Sbjct: 105 DTM 107


>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
           sativa subsp. indica GN=OsI_027381 PE=1 SV=2
          Length = 283

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46  RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104

Query: 107 DTV 109
           DT+
Sbjct: 105 DTM 107


>sp|Q9W0T5|PYX_DROME Transient receptor potential channel pyrexia OS=Drosophila
           melanogaster GN=pyx PE=2 SV=2
          Length = 956

 Score = 32.7 bits (73), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 17  CCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTI 76
           CCN   KA A  V  +  +G  PL   A   FSS     I   +  TA  DG       I
Sbjct: 349 CCNALLKAGAD-VNKADNYGYTPLHIAALNEFSSCVYTFIEHGADITARTDGRVSALSFI 407

Query: 77  --PTPKVIIDLDSDPDATI 93
              TP++I  L    D++I
Sbjct: 408 VRRTPEIIPKLMQKLDSSI 426


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.132    0.390 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,399,548
Number of Sequences: 539616
Number of extensions: 1457669
Number of successful extensions: 3219
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3214
Number of HSP's gapped (non-prelim): 8
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)