BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033884
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O42901|YBA9_SCHPO Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3
Length = 186
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%)
Query: 12 NRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGT 71
N N+ W Y G W ++ ++ L+ ++ + S +AWTL +L++ ++ FHW GT
Sbjct: 33 NYNSNWVNYKGAWVIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGT 92
Query: 72 PFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
PF + G Y+ LT WEQ+D G Q T RK+L V+P++L
Sbjct: 93 PFEFNGGAYDRLTMWEQLDEGNQYTPARKYLLVLPIIL 130
>sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1
Length = 153
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W TY + + +++LS+ CS +AWTL ++ H Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGMYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKF T+ P++L
Sbjct: 65 HAVKGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIIL 109
>sp|Q53FV1|ORML2_HUMAN ORM1-like protein 2 OS=Homo sapiens GN=ORMDL2 PE=2 SV=2
Length = 153
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W Y+ ++ + +++LS+ S + WTL ++ H TY F
Sbjct: 5 VAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKFL++ P+VL
Sbjct: 65 HTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVL 109
>sp|Q8N138|ORML3_HUMAN ORM1-like protein 3 OS=Homo sapiens GN=ORMDL3 PE=1 SV=1
Length = 153
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q6QI25|ORML3_RAT ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2
Length = 153
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q9CPZ6|ORML3_MOUSE ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1
Length = 153
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q0VD15|ORML3_BOVIN ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1
Length = 153
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q5R570|ORML3_PONAB ORM1-like protein 3 OS=Pongo abelii GN=ORMDL3 PE=2 SV=1
Length = 153
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q5XJR6|ORML3_DANRE ORM1-like protein 3 OS=Danio rerio GN=ormdl3 PE=2 SV=1
Length = 153
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLGIGLLHIILLSIPFVSVPVVWTLTNLIHNMCMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P++L
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIIL 109
>sp|D2I2F3|ORML3_AILME ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1
Length = 153
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W +Y+ + + +++LS+ S + WTL +L H Y F H
Sbjct: 8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNTGMYIFLHTV 67
Query: 69 KGTPF-ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P+VL
Sbjct: 68 KGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVL 109
>sp|Q5ZIU0|ORML2_CHICK ORM1-like protein 2 OS=Gallus gallus GN=ORMDL2 PE=2 SV=1
Length = 153
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT + G+W Y+ + +++LS+ S + WTL ++ H V Y H
Sbjct: 8 SEVNPNTRVMSSRGIWLAYVISVAALHVILLSIPFFSIPVVWTLTNVIHNLVMYLLLHTV 67
Query: 69 KGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQID G Q T +RKFL++ PVVL
Sbjct: 68 KGTPFETPDQGKDRLLTHWEQIDYGMQCTSSRKFLSISPVVL 109
>sp|Q5XH57|ORML1_XENLA ORM1-like protein 1 OS=Xenopus laevis GN=ormdl1 PE=2 SV=1
Length = 153
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 9 TDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWK 68
+++N NT G+W TY + + +++LS+ S +AWTL ++ H Y F H
Sbjct: 8 SEVNPNTRVMNSRGMWLTYALGVGMLHIVLLSIPFFSVPVAWTLTNVIHNLGMYVFLHAV 67
Query: 69 KGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
KGTPF DQG LT WEQ+D G Q T +RKFLT+ P++L
Sbjct: 68 KGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFLTISPIIL 109
>sp|Q8JFB7|ORML1_DANRE ORM1-like protein 1 OS=Danio rerio GN=ormdl1 PE=2 SV=1
Length = 153
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W TY + + +++LS+ S + WTL ++ H F Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGIWLTYALGVGMLHIVLLSIPFFSVPVVWTLTNVIHNFGMYVFM 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKF T+ P++L
Sbjct: 65 HAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIIL 109
>sp|Q5R8X5|ORML1_PONAB ORM1-like protein 1 OS=Pongo abelii GN=ORMDL1 PE=2 SV=1
Length = 153
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W TY + + +++LS+ S +AWTL ++ H Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGMYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKF T+ P++L
Sbjct: 65 HAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIIL 109
>sp|Q9P0S3|ORML1_HUMAN ORM1-like protein 1 OS=Homo sapiens GN=ORMDL1 PE=2 SV=1
Length = 153
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W TY + + +++LS+ S +AWTL ++ H Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGMYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKF T+ P++L
Sbjct: 65 HAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIIL 109
>sp|Q29RQ9|ORML1_BOVIN ORM1-like protein 1 OS=Bos taurus GN=ORMDL1 PE=2 SV=1
Length = 153
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W TY + + +++LS+ S +AWTL ++ H Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNVIHNLGMYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKF T+ P++L
Sbjct: 65 HAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIIL 109
>sp|Q5E972|ORML2_BOVIN ORM1-like protein 2 OS=Bos taurus GN=ORMDL2 PE=2 SV=1
Length = 153
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W Y+ ++ + +++LS+ S + WTL ++ H V Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLVMYVFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKFL++ P+VL
Sbjct: 65 HTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVL 109
>sp|Q9CQZ0|ORML2_MOUSE ORM1-like protein 2 OS=Mus musculus GN=Ormdl2 PE=2 SV=1
Length = 153
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 6 VPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFF 65
V +++N NT G+W Y+ ++ + +++LS+ S + WTL ++ H Y F
Sbjct: 5 VAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAMYIFL 64
Query: 66 HWKKGTPFA-DDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
H KGTPF DQG LT WEQ+D G Q T +RKFL++ P+VL
Sbjct: 65 HTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVL 109
>sp|Q06144|ORM2_YEAST Protein ORM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ORM2 PE=1 SV=1
Length = 216
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 12 NRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGT 71
N N W G W ++ ++ + L SLF + WTL ++++ Y FH KGT
Sbjct: 69 NMNATWVDQRGAWLIHI-VVIVLLRLFYSLFGSTPKWTWTLTNMTYIIGFYIMFHLVKGT 127
Query: 72 PFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
PF + G Y+ LT WEQI++ T RKFL +VP+VL
Sbjct: 128 PFDFNGGAYDNLTMWEQINDETLYTPTRKFLLIVPIVL 165
>sp|Q96495|ORM1_SACMO Protein ORM1 OS=Saccharomyces monacensis GN=ORM1 PE=4 SV=1
Length = 148
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 14 NTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPF 73
N W G W ++ ++ + L ++ +WTL ++++ +Y FH KGTPF
Sbjct: 2 NATWVDQRGAWIIHVVVITLLKLFFNLFPGVTAEWSWTLTNMTYVVGSYVMFHLIKGTPF 61
Query: 74 ADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
+ G Y+ LT WEQID+ T +RKFL +VP+ L
Sbjct: 62 DFNGGAYDNLTMWEQIDDETLFTPSRKFLIIVPIAL 97
>sp|P53224|ORM1_YEAST Protein ORM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ORM1 PE=1 SV=1
Length = 222
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 12 NRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGT 71
N N W G W ++ I+ + L ++ +WTL ++++ +Y FH KGT
Sbjct: 74 NMNATWVDQRGAWIIHVVIIILLKLFYNLFPGVTTEWSWTLTNMTYVIGSYVMFHLIKGT 133
Query: 72 PFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
PF + G Y+ LT WEQID+ T +RKFL VP+ L
Sbjct: 134 PFDFNGGAYDNLTMWEQIDDETLYTPSRKFLISVPIAL 171
>sp|Q9VP04|ORMDL_DROME ORM1-like protein OS=Drosophila melanogaster GN=ORMDL PE=1 SV=1
Length = 154
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 10 DLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKK 69
+ N N+ W + G W YL L LL LS+ S AWT +L H +F H K
Sbjct: 10 EANPNSSWLSARGFWLAYLLGLLSVHLLFLSVPFVSIPWAWTATNLLHNAAHLYFLHVIK 69
Query: 70 GTP-FADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVL 109
G P + + T WEQID+G Q+T RKFLT VP+VL
Sbjct: 70 GAPWLSTENDPSRRWTHWEQIDDGVQMTTTRKFLTAVPIVL 110
>sp|P20666|TFPB_MORBO Protein TfpB OS=Moraxella bovis GN=tfpB PE=4 SV=1
Length = 261
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 67 WKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVV 108
W + Q Y+G WW + G + R+ ++ VV +V
Sbjct: 23 WATAYAYGWGQAAYHGYPWWHVVQGGSMIARSLAYVCVVSMV 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.499
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,425,820
Number of Sequences: 539616
Number of extensions: 1779063
Number of successful extensions: 3807
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3765
Number of HSP's gapped (non-prelim): 28
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)