BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033887
         (109 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LUV2|POP3_ARATH Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1
           SV=1
          Length = 109

 Score =  178 bits (451), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/109 (75%), Positives = 98/109 (89%)

Query: 1   MEEAKGVVKHVLLAKFKEGTAQDQIDQLIKDYANLVNLIEPMKSFQWGKNVSIENLHQGF 60
           MEEAKG VKHVLLA FK+G + ++I++LIK YANLVNLIEPMK+F WGK+VSIENLHQG+
Sbjct: 1   MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGY 60

Query: 61  THIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVRV 109
           THIFESTFES E VAEY+AHPAHVE+A +FL +L+KVLVIDYKPT+V +
Sbjct: 61  THIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 109


>sp|I6WU39|OLIAC_CANSA Olivetolic acid cyclase OS=Cannabis sativa GN=OAC PE=1 SV=1
          Length = 101

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 66/97 (68%)

Query: 8   VKHVLLAKFKEGTAQDQIDQLIKDYANLVNLIEPMKSFQWGKNVSIENLHQGFTHIFEST 67
           VKH+++ KFK+   + Q ++  K Y NLVN+I  MK   WGK+V+ +N  +G+THI E T
Sbjct: 3   VKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKNKEEGYTHIVEVT 62

Query: 68  FESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 104
           FES E + +Y+ HPAHV + +++ +  EK+L+ DY P
Sbjct: 63  FESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTP 99


>sp|Q9FK81|Y5258_ARATH Uncharacterized protein At5g22580 OS=Arabidopsis thaliana
           GN=At5g22580 PE=1 SV=1
          Length = 111

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 69/101 (68%), Gaps = 4/101 (3%)

Query: 9   KHVLLAKFKEGTAQDQIDQLIKDYANLVNLIEPMKSFQWGKNV-SIENLHQGFTHIFEST 67
           KH+++ KFKE T   ++D+++K   NLV+ I+ +KSF+WG++  S + L QGFTH F  T
Sbjct: 7   KHLVVVKFKEDT---KVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMT 63

Query: 68  FESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVR 108
           FE+ +G   + +HP HVE++  F A ++K++++D+    V+
Sbjct: 64  FENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104


>sp|P84986|STBP1_POPEU Stable protein 1 (Fragments) OS=Populus euphratica PE=1 SV=1
          Length = 56

 Score = 38.1 bits (87), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 59 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 96
          G+TH FESTFES  G+ EY+   A   +A  FL  L +
Sbjct: 1  GYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQ 38


>sp|P38521|YGGL_ECOLI Uncharacterized protein YggL OS=Escherichia coli (strain K12)
          GN=yggL PE=4 SV=2
          Length = 108

 Score = 30.4 bits (67), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%)

Query: 15 KFKEGTAQDQIDQLIKDYANLVNLIEPMK 43
          +F EGT+++QID+ + D+ N V  IEP K
Sbjct: 28 RFPEGTSEEQIDKTVDDFINEV--IEPNK 54


>sp|A1KBD3|LEU1_AZOSB 2-isopropylmalate synthase OS=Azoarcus sp. (strain BH72) GN=leuA
           PE=3 SV=1
          Length = 572

 Score = 30.0 bits (66), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 50  NVSIENLHQGFTHIFESTFESTEGVAEYVAH 80
           +V+IE L Q   H+ E TFES  G    + H
Sbjct: 104 DVTIEVLTQARPHLIERTFESVRGAKRAIVH 134


>sp|B4S9D5|SYP_PROA2 Proline--tRNA ligase OS=Prosthecochloris aestuarii (strain DSM 271
           / SK 413) GN=proS PE=3 SV=1
          Length = 481

 Score = 29.3 bits (64), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 38  LIEPMKSFQWGKNVSIENLHQGFTHIFESTFESTEGVAEYV 78
           +++  K+ Q G +    NL Q F   F+  F+S EG  EYV
Sbjct: 215 MMQDKKALQAGTS---HNLGQNFAKAFDCRFQSKEGALEYV 252


>sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400
           OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1
          Length = 670

 Score = 29.3 bits (64), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 16  FKEGTAQDQIDQLIKDYANLVNLIEPMKSFQW----GKNVSIENLHQGFTHIFESTFEST 71
           F EGT + +++ L++  A ++       +++     G  V+++ L    T   +  FE  
Sbjct: 348 FFEGTRRFELEDLLRASAEMLGKGGFGTAYKAVLEDGNEVAVKRLKDAVTVAGKKEFEQQ 407

Query: 72  EGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 104
             V   + H   V     + A  EK+LV DY P
Sbjct: 408 MEVLGRLRHTNLVSLKAYYFAREEKLLVYDYMP 440


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,457,324
Number of Sequences: 539616
Number of extensions: 1448508
Number of successful extensions: 4153
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4144
Number of HSP's gapped (non-prelim): 15
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)