Query 033888
Match_columns 109
No_of_seqs 27 out of 29
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 12:19:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033888.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033888hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yf2a2 d.287.1.2 (A:221-425) 74.7 2.3 0.00017 26.4 4.4 41 50-90 157-197 (205)
2 d1ydxa2 d.287.1.2 (A:194-374) 71.5 2.9 0.00021 26.2 4.4 42 49-90 136-177 (181)
3 d2oa5a1 d.362.1.1 (A:7-102) Un 70.1 0.96 7E-05 29.9 1.8 24 56-79 3-26 (96)
4 d1nkpa_ a.38.1.1 (A:) Myc prot 68.5 2.1 0.00015 26.0 3.1 28 54-81 58-85 (88)
5 d1nlwa_ a.38.1.1 (A:) Mad prot 60.3 6.8 0.0005 23.1 4.3 23 56-78 55-77 (79)
6 d1ydxa1 d.287.1.2 (A:1-193) Bi 59.7 6.7 0.00049 24.5 4.4 38 50-87 142-179 (193)
7 d1am9a_ a.38.1.1 (A:) SREBP-1a 59.3 6 0.00044 23.6 3.9 27 56-82 51-77 (80)
8 d1nkpa_ a.38.1.1 (A:) Myc prot 59.2 7.1 0.00051 23.5 4.3 32 55-86 52-83 (88)
9 d1yf2a1 d.287.1.2 (A:1-220) Bi 57.0 7.6 0.00056 24.9 4.4 42 50-91 167-208 (220)
10 d1uklc_ a.38.1.1 (C:) SREBP-2 55.3 5.6 0.00041 22.8 3.2 23 56-78 34-56 (61)
11 d1nkpb_ a.38.1.1 (B:) Max prot 54.9 3.5 0.00026 24.7 2.3 27 54-80 53-79 (83)
12 d2azeb1 e.63.1.2 (B:201-301) T 52.2 11 0.00077 24.2 4.4 35 56-90 2-36 (101)
13 d1nlwa_ a.38.1.1 (A:) Mad prot 47.2 8.9 0.00064 22.5 3.2 31 55-85 47-77 (79)
14 d1fxka_ a.2.5.1 (A:) Prefoldin 43.1 18 0.0013 22.3 4.4 33 54-86 71-103 (107)
15 d1nkpb_ a.38.1.1 (B:) Max prot 42.4 19 0.0014 21.1 4.3 31 55-85 47-77 (83)
16 d1fxkc_ a.2.5.1 (C:) Prefoldin 34.2 27 0.002 21.6 4.2 34 54-87 94-127 (133)
17 d1ab4a_ e.11.1.1 (A:) DNA Gyra 28.2 33 0.0024 26.5 4.5 45 42-87 428-479 (493)
18 d1k78a2 a.4.1.5 (A:82-142) Pax 27.8 14 0.0011 22.2 1.8 35 59-95 13-47 (61)
19 d1tbga_ b.69.4.1 (A:) beta1-su 25.6 34 0.0024 21.2 3.4 23 62-84 2-24 (340)
20 d1x3zb1 a.189.1.1 (B:253-309) 24.5 20 0.0015 21.2 2.1 22 18-39 33-54 (57)
21 d1j26a_ d.50.4.1 (A:) Ict1 pro 22.3 16 0.0012 23.6 1.4 13 8-20 28-40 (112)
22 d1se9a_ d.15.1.1 (A:) Hypothet 21.1 6.6 0.00048 25.2 -0.8 32 75-106 28-61 (101)
23 d2jn6a1 a.4.1.19 (A:1-89) Unch 20.1 7.6 0.00055 23.2 -0.6 44 33-76 25-80 (89)
No 1
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=74.65 E-value=2.3 Score=26.43 Aligned_cols=41 Identities=10% Similarity=0.190 Sum_probs=33.1
Q ss_pred ccchhhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhhhhc
Q 033888 50 SLGQKYRIHDLQEDTSALKEEQESLTNRMNNIKHSLLHEAS 90 (109)
Q Consensus 50 Sl~Qq~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~EA~ 90 (109)
+++-|++|.+.-+....+...++..-..+..+|+.|+..+=
T Consensus 157 ~~~eQ~~I~~~l~~id~~i~~~~~~~~~l~~~k~~Ll~~l~ 197 (205)
T d1yf2a2 157 PLEEQKQIAKILSSVDKSIELKKQKKEKLQRMKKKIMELLL 197 (205)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556777777777888888888889999999999998764
No 2
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=71.46 E-value=2.9 Score=26.19 Aligned_cols=42 Identities=10% Similarity=0.076 Sum_probs=37.3
Q ss_pred hccchhhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhhhhc
Q 033888 49 RSLGQKYRIHDLQEDTSALKEEQESLTNRMNNIKHSLLHEAS 90 (109)
Q Consensus 49 RSl~Qq~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~EA~ 90 (109)
-++++|++|-++-...+.+...++.......++|+.|+.+.=
T Consensus 136 P~l~eQ~~I~~~l~~~d~~i~~~~~~i~~l~~lk~~Ll~~lF 177 (181)
T d1ydxa2 136 KSFQLQRKAGKIVFLLDQKLDQYKKELSSLTVIRDTLLKKLF 177 (181)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577899999999999999999999999999999999987653
No 3
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=70.14 E-value=0.96 Score=29.92 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=21.0
Q ss_pred hhhhhHHhhHHHHHHhHHHHHHHH
Q 033888 56 RIHDLQEDTSALKEEQESLTNRMN 79 (109)
Q Consensus 56 ~I~~L~~dkasL~~en~~l~~rMw 79 (109)
-+|+|+++..-|+-||+.|++.|.
T Consensus 3 t~EeLaaeL~rL~~ENk~LKkkl~ 26 (96)
T d2oa5a1 3 TYEEMVKEVERLKLENKTLKQKVK 26 (96)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 368999999999999999988776
No 4
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.51 E-value=2.1 Score=26.01 Aligned_cols=28 Identities=14% Similarity=0.379 Sum_probs=22.1
Q ss_pred hhhhhhhHHhhHHHHHHhHHHHHHHHHH
Q 033888 54 KYRIHDLQEDTSALKEEQESLTNRMNNI 81 (109)
Q Consensus 54 q~~I~~L~~dkasL~~en~~l~~rMw~~ 81 (109)
+++++.|..++..|+++++.|..++..+
T Consensus 58 ~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 58 QAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677888888888888888888877554
No 5
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.31 E-value=6.8 Score=23.08 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=13.4
Q ss_pred hhhhhHHhhHHHHHHhHHHHHHH
Q 033888 56 RIHDLQEDTSALKEEQESLTNRM 78 (109)
Q Consensus 56 ~I~~L~~dkasL~~en~~l~~rM 78 (109)
.++.|..++..|++++..|..++
T Consensus 55 ~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 55 SDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555666666666666665544
No 6
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=59.74 E-value=6.7 Score=24.48 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=21.6
Q ss_pred ccchhhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhh
Q 033888 50 SLGQKYRIHDLQEDTSALKEEQESLTNRMNNIKHSLLH 87 (109)
Q Consensus 50 Sl~Qq~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~ 87 (109)
+.++|.+|-+.-+..+.+...++........+|+.|+.
T Consensus 142 ~~~eQ~~I~~~l~~ld~~i~~~~~~i~~l~~~~~~ll~ 179 (193)
T d1ydxa1 142 NKNEQHAIANTLSVFDERLENLASLIEINRKLRDEYAH 179 (193)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888655555555555555555555555555544
No 7
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.30 E-value=6 Score=23.58 Aligned_cols=27 Identities=33% Similarity=0.341 Sum_probs=19.2
Q ss_pred hhhhhHHhhHHHHHHhHHHHHHHHHHH
Q 033888 56 RIHDLQEDTSALKEEQESLTNRMNNIK 82 (109)
Q Consensus 56 ~I~~L~~dkasL~~en~~l~~rMw~~k 82 (109)
.|..|+.+...|.+++..|...+...+
T Consensus 51 yI~~L~~~~~~L~~e~~~lk~~~~~~~ 77 (80)
T d1am9a_ 51 YIRFLQHSNQKLKQENLSLRTAVHKSK 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 577777777778888777776665543
No 8
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.19 E-value=7.1 Score=23.46 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=27.3
Q ss_pred hhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHh
Q 033888 55 YRIHDLQEDTSALKEEQESLTNRMNNIKHSLL 86 (109)
Q Consensus 55 ~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~ 86 (109)
.+|..|+++...|..+.+.|......++++|-
T Consensus 52 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~ 83 (88)
T d1nkpa_ 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLE 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999999999999999998888888763
No 9
>d1yf2a1 d.287.1.2 (A:1-220) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=57.01 E-value=7.6 Score=24.89 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=34.4
Q ss_pred ccchhhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhhhhcc
Q 033888 50 SLGQKYRIHDLQEDTSALKEEQESLTNRMNNIKHSLLHEASL 91 (109)
Q Consensus 50 Sl~Qq~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~EA~~ 91 (109)
+.+.|.+|-..-....++...++.....+...|+.|+.++=.
T Consensus 167 p~~eQ~~I~~~l~~i~~~i~~~~~~i~~L~~~r~~ll~~l~t 208 (220)
T d1yf2a1 167 PLEEQKQIAKILTKIDEGIEIIEKSINKLERIKKGLMHKLLT 208 (220)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 566788888888888888888888888889999999887743
No 10
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.33 E-value=5.6 Score=22.81 Aligned_cols=23 Identities=26% Similarity=0.196 Sum_probs=16.7
Q ss_pred hhhhhHHhhHHHHHHhHHHHHHH
Q 033888 56 RIHDLQEDTSALKEEQESLTNRM 78 (109)
Q Consensus 56 ~I~~L~~dkasL~~en~~l~~rM 78 (109)
+|..|+.+...|..|+..|+..+
T Consensus 34 YI~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 34 YIKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777778877777776654
No 11
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.89 E-value=3.5 Score=24.67 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=21.0
Q ss_pred hhhhhhhHHhhHHHHHHhHHHHHHHHH
Q 033888 54 KYRIHDLQEDTSALKEEQESLTNRMNN 80 (109)
Q Consensus 54 q~~I~~L~~dkasL~~en~~l~~rMw~ 80 (109)
+..++.|+.+...|+++++.|...+..
T Consensus 53 ~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 53 RRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556778888888888888888877654
No 12
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.19 E-value=11 Score=24.18 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=28.2
Q ss_pred hhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhhhhc
Q 033888 56 RIHDLQEDTSALKEEQESLTNRMNNIKHSLLHEAS 90 (109)
Q Consensus 56 ~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~EA~ 90 (109)
+++.|++|.++|..+-+.|-..+...+++|.....
T Consensus 2 r~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lte 36 (101)
T d2azeb1 2 RLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 36 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 67889999999998888888888888887776443
No 13
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.16 E-value=8.9 Score=22.54 Aligned_cols=31 Identities=16% Similarity=0.326 Sum_probs=27.1
Q ss_pred hhhhhhHHhhHHHHHHhHHHHHHHHHHHHHH
Q 033888 55 YRIHDLQEDTSALKEEQESLTNRMNNIKHSL 85 (109)
Q Consensus 55 ~~I~~L~~dkasL~~en~~l~~rMw~~k~~L 85 (109)
..|..|+.+...|..+.+.|...+..+++.|
T Consensus 47 ~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3688999999999999999999998888876
No 14
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=43.12 E-value=18 Score=22.30 Aligned_cols=33 Identities=9% Similarity=0.338 Sum_probs=27.9
Q ss_pred hhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHh
Q 033888 54 KYRIHDLQEDTSALKEEQESLTNRMNNIKHSLL 86 (109)
Q Consensus 54 q~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~ 86 (109)
+.+++.|+.+...|.+.-+.+...|.+|+..+.
T Consensus 71 ~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 71 QEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888888888899999999988774
No 15
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.41 E-value=19 Score=21.11 Aligned_cols=31 Identities=6% Similarity=0.184 Sum_probs=25.5
Q ss_pred hhhhhhHHhhHHHHHHhHHHHHHHHHHHHHH
Q 033888 55 YRIHDLQEDTSALKEEQESLTNRMNNIKHSL 85 (109)
Q Consensus 55 ~~I~~L~~dkasL~~en~~l~~rMw~~k~~L 85 (109)
..|..|+++...|..+.+.+....-.+++++
T Consensus 47 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l 77 (83)
T d1nkpb_ 47 EYIQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999988888877777765
No 16
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=34.18 E-value=27 Score=21.62 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=25.1
Q ss_pred hhhhhhhHHhhHHHHHHhHHHHHHHHHHHHHHhh
Q 033888 54 KYRIHDLQEDTSALKEEQESLTNRMNNIKHSLLH 87 (109)
Q Consensus 54 q~~I~~L~~dkasL~~en~~l~~rMw~~k~~L~~ 87 (109)
++||+.|+.....|.++-+.+...+..+.+.+-+
T Consensus 94 ~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~ 127 (133)
T d1fxkc_ 94 KSQKNELESTLQKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777777777777777777776654
No 17
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=28.16 E-value=33 Score=26.47 Aligned_cols=45 Identities=22% Similarity=0.291 Sum_probs=32.6
Q ss_pred HHHHHHhhccchhhhhhhhHHhhHHHHHHhHHHHH------HHHH-HHHHHhh
Q 033888 42 GILLLSVRSLGQKYRIHDLQEDTSALKEEQESLTN------RMNN-IKHSLLH 87 (109)
Q Consensus 42 ~~~~Ls~RSl~Qq~~I~~L~~dkasL~~en~~l~~------rMw~-~k~~L~~ 87 (109)
.+|-|-++++-+ .+++.|++|.+.|.++-+.|.+ ++|+ ++++|-+
T Consensus 428 ~IL~MrL~~LT~-le~~kL~~E~~~l~~ei~eL~~iL~s~~~l~~~i~~EL~~ 479 (493)
T d1ab4a_ 428 AILDLRLQKLTG-LEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL 479 (493)
T ss_dssp HHHTCCGGGGSH-HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 557788889884 4558899999999999888876 3554 3566644
No 18
>d1k78a2 a.4.1.5 (A:82-142) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.77 E-value=14 Score=22.23 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=27.0
Q ss_pred hhHHhhHHHHHHhHHHHHHHHHHHHHHhhhhccCCCc
Q 033888 59 DLQEDTSALKEEQESLTNRMNNIKHSLLHEASLEPTG 95 (109)
Q Consensus 59 ~L~~dkasL~~en~~l~~rMw~~k~~L~~EA~~dss~ 95 (109)
+.++..+.+++||-+|- -|++++.|+.|---|.+-
T Consensus 13 ~V~~kI~~yK~enP~iF--aWEIRd~Li~egiC~~~n 47 (61)
T d1k78a2 13 KVVEKIAEYKRQNPTMF--AWEIRDRLLAERVCDNDT 47 (61)
T ss_dssp HHHHHHHHHHHHCTTCC--HHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHhcCCccc--HHHHHHHHHHcCCCCCCC
Confidence 45677788888888875 499999999987655443
No 19
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.63 E-value=34 Score=21.15 Aligned_cols=23 Identities=22% Similarity=0.515 Sum_probs=17.5
Q ss_pred HhhHHHHHHhHHHHHHHHHHHHH
Q 033888 62 EDTSALKEEQESLTNRMNNIKHS 84 (109)
Q Consensus 62 ~dkasL~~en~~l~~rMw~~k~~ 84 (109)
+|.+.|++|.+.|+.++.+-|+.
T Consensus 2 ~~~~~l~~~~~~l~~~~~~~~~~ 24 (340)
T d1tbga_ 2 SELDQLRQEAEQLKNQIRDARKA 24 (340)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Confidence 36677888888888888877754
No 20
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.53 E-value=20 Score=21.24 Aligned_cols=22 Identities=9% Similarity=0.171 Sum_probs=17.8
Q ss_pred CchhhHHHHHhhccchHHHHHH
Q 033888 18 KRSLGFIANAKKHKHSFIQLFA 39 (109)
Q Consensus 18 ~r~~g~~a~A~k~k~~fiq~~L 39 (109)
+|-+-+.+..+.|.+.||+.+|
T Consensus 33 ~ryp~lre~im~npe~fismll 54 (57)
T d1x3zb1 33 ARYPQLREHIMANPEVFVSMLL 54 (57)
T ss_dssp TTCHHHHHHHHTCHHHHHHHHH
T ss_pred HhhHHHHHHHHhCHHHHHHHHH
Confidence 4556677888889999999886
No 21
>d1j26a_ d.50.4.1 (A:) Ict1 protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.30 E-value=16 Score=23.62 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=10.5
Q ss_pred CCCCCCCCCCCch
Q 033888 8 SSAGSTAQNPKRS 20 (109)
Q Consensus 8 ~~~~~~~~~~~r~ 20 (109)
-|.+||||+-||+
T Consensus 28 RSsGPGGQ~VNKv 40 (112)
T d1j26a_ 28 RSSGPGGQNVNKV 40 (112)
T ss_dssp CCCCSSSSCCSSC
T ss_pred EcCCCCCCcccee
Confidence 4778999998875
No 22
>d1se9a_ d.15.1.1 (A:) Hypothetical protein At3g01050 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.08 E-value=6.6 Score=25.15 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhhhccCCCcch--HHHHHHhhc
Q 033888 75 TNRMNNIKHSLLHEASLEPTGLF--ASRLRHLFG 106 (109)
Q Consensus 75 ~~rMw~~k~~L~~EA~~dss~v~--aSRLR~Ifg 106 (109)
+.++-++|+.+.++-..+-.+++ +++.|.||+
T Consensus 28 s~TV~~lK~~I~~~~~~~k~~iP~~~~~qRLIf~ 61 (101)
T d1se9a_ 28 ATTVSALKETVISEWPREKENGPKTVKEVKLISA 61 (101)
T ss_dssp TCBHHHHHHHHHHHSCTTCSSSCCSGGGEEEEET
T ss_pred cCHHHHHHHHHHHhccccccCCCCCcccEEEEEC
Confidence 34677889988887666667776 889999996
No 23
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=20.08 E-value=7.6 Score=23.16 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHhhccchhhh------------hhhhHHhhHHHHHHhHHHHH
Q 033888 33 SFIQLFAMTGILLLSVRSLGQKYR------------IHDLQEDTSALKEEQESLTN 76 (109)
Q Consensus 33 ~fiq~~Lmg~~~~Ls~RSl~Qq~~------------I~~L~~dkasL~~en~~l~~ 76 (109)
++-++.-=-||---.++.+-+||+ ....+.+...|++||+-|++
T Consensus 25 s~~~vA~~lGIs~~tl~~W~k~~~~~~~~~~~~~~~~~~~~~ei~~L~~En~~Lk~ 80 (89)
T d2jn6a1 25 SLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRA 80 (89)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHHHCCCSTTCSCCCCHHHHTHHHHHHHHHCGGGGGG
T ss_pred cHHHHHHHHCCCHHHHHHHHHHHhhcccccCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 344444444444444555545543 34556677777777776643
Done!