BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033889
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 79/89 (88%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
Query: 11 GP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GP TVHEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV+ KKFG+L NWQR
Sbjct: 54 GPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQR 113
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+YTMEDILTQLKKEMAA HNRKLVQPPEG
Sbjct: 114 QYTMEDILTQLKKEMAASHNRKLVQPPEG 142
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/89 (87%), Positives = 82/89 (92%), Gaps = 1/89 (1%)
Query: 11 GP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GP TVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV+PKKFGLL NWQR
Sbjct: 55 GPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQR 114
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
EYTMEDIL QLKKEM+ HNRKLVQPPEG
Sbjct: 115 EYTMEDILVQLKKEMSTSHNRKLVQPPEG 143
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 74/98 (75%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
M ++ P T +EG+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVVEP
Sbjct: 44 MQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSL 103
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
F +L NW+REYTMEDIL +LKKEM HNRKL QPPEG
Sbjct: 104 FPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEG 141
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 11 GP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GP T +EG+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV+P F +L NW+R
Sbjct: 53 GPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRR 112
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
E+TMED+L QLKKEM + NRKL QP EG
Sbjct: 113 EFTMEDLLIQLKKEMMSSQNRKLAQPLEG 141
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 11 GPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GPQ T + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK +L NW
Sbjct: 47 GPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTS 106
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEGPH 100
+ +++IL++L++EM++ N+KLVQPPEG +
Sbjct: 107 KNRIQNILSELRREMSSSSNKKLVQPPEGAN 137
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 GPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GP +VHE RIY LK+ CD +YP+ PP V F SRIN+ V+ ETG V P K L +W+R
Sbjct: 47 GPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKR 106
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
EY+ME +L LKKEMA+ NRKL QPPEG
Sbjct: 107 EYSMETVLLDLKKEMASSSNRKLPQPPEG 135
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T++E RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV+P+
Sbjct: 45 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRA 104
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ ++++ IL +L++ M + N KL QPPEG
Sbjct: 105 TAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEG 142
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+
Sbjct: 45 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 104
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 105 ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+
Sbjct: 45 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 104
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 105 ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
M + P + HE RIY L + C +YP+ PP V F S+IN+ CVN TG V+
Sbjct: 38 MTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQ-TD 96
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
F L +W+R YTME +L L+KEMA P N+KL QP EG
Sbjct: 97 FHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEG 134
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+
Sbjct: 43 LTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ ++++ +L +L++ M + N KL QPPEG
Sbjct: 103 ISVLAKWQNSFSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 61/98 (62%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PPSVRF ++INM +N+ +G+V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ IL +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSYSIKVILQELRRLMMSKENMKLPQPPEG 140
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PPSVRF ++INM +N+ +G+V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T++E RIY LK+ C PE PP VRF ++INM VN GVV+P+
Sbjct: 45 LTRWTGMIIGPPRTIYENRIYSLKIECGPKCPEAPPFVRFVTKINMNGVNSSNGVVDPRA 104
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 105 ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PPSVRF ++INM +N+ +G+V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PPSVRF ++INM +N+ +G+V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PPSVRF ++INM +N+ +G+V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY LK+ C YPE PP+VRF ++INM +N+ G+V+ +
Sbjct: 42 LTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARS 101
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ Y+++ +L +L++ M + N KL QPPEG
Sbjct: 102 IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 139
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ + P+T +E RIY L+L C YPE PP+VRF +++NM +N+ G V+ +
Sbjct: 43 LTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRS 102
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
+L WQ ++++ +L +L++ M + N KL QPPEG
Sbjct: 103 IPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEG 140
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 11 GP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQR 69
GP +T +E RIY LK+ C YPE PP+VRF ++I+M +N+ G+V+ + +L WQ
Sbjct: 52 GPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMVDARSIPILAKWQN 111
Query: 70 EYTMEDILTQLKKEMAAPHNRKLVQPPEG 98
Y+++ +L +L++ M + N KL QPPEG
Sbjct: 112 SYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|O13685|UBC13_SCHPO Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc13 PE=1 SV=1
Length = 148
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 2 VNYFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ YF GPQ + +EG + L+LF +YP PP+VRF ++I V+ +
Sbjct: 31 LRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRIC---L 87
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDV 104
L +W + +L ++ M AP+ P+ P DV
Sbjct: 88 STLKKDWSPALQIRTVLLSIQALMGAPN-------PDDPLDNDV 124
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 8 FFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN 66
GP +T +EG ++QL + YP +PP VRF ++I V+ +TG + +L N
Sbjct: 40 LIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI---CLDILKN 96
Query: 67 -WQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMD 103
W +T++ + + MA P P+ P + D
Sbjct: 97 AWSPAWTLQSVCRAIIALMAHPE-------PDSPLNCD 127
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 8 FFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN- 66
F T +G ++L L +DYP KPP+VRF SR+ + + + +L N
Sbjct: 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQ 95
Query: 67 WQREYTMEDILTQLKKEMAAPH 88
W Y + ILT ++ + P+
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPN 117
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 8 FFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN- 66
F T +G ++L L +DYP KPP+VRF SR+ + + + +L N
Sbjct: 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQ 95
Query: 67 WQREYTMEDILTQLKKEMAAPH 88
W Y + ILT ++ + P+
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPN 117
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 8 FFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN- 66
F T +G ++L L +DYP KPP+VRF SR+ + + + +L N
Sbjct: 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQ 95
Query: 67 WQREYTMEDILTQLKKEMAAPH 88
W Y + ILT ++ + P+
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPN 117
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 2 VNYFPFFFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+ YF GP Q+ +E I++L+L+ DYP + P VRF ++I ++ +
Sbjct: 32 LRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRIC---L 88
Query: 61 FGLLVNWQREYTMEDILTQLKKEMAAPH 88
L NW + +L ++ +A+P+
Sbjct: 89 DVLKTNWSPALQIRTVLLSIQALLASPN 116
>sp|Q86K32|UBE2N_DICDI Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium
discoideum GN=ube2n PE=3 SV=2
Length = 154
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF SGP + EG ++ L+LF DYP P VRF ++I
Sbjct: 34 YFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKI 75
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 8 FFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN- 66
F T +G ++L L +DYP KPP+VRF SR+ + + + +L N
Sbjct: 40 IFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQ 95
Query: 67 WQREYTMEDILTQLKKEMAAPH 88
W Y + ILT ++ + P+
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPN 117
>sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana
GN=UBC36 PE=1 SV=1
Length = 153
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 VNYFPFFFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
+ YF GP Q+ +EG +++L+LF ++YP P VRF ++I
Sbjct: 34 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana
GN=UBC35 PE=1 SV=1
Length = 153
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 VNYFPFFFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
+ YF GP Q+ +EG +++L+LF ++YP P VRF ++I
Sbjct: 34 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 2 VNYFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
+++ F GP+ T +EG + + + DYP +PP + F ++I V+ +TG +
Sbjct: 33 ISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAI---C 89
Query: 61 FGLLVN-WQREYTMEDILTQLKKEMAAPH 88
+L + W YTM+ L L+ + P
Sbjct: 90 LDILKDQWSPVYTMKSALISLQSLLCTPE 118
>sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N
PE=2 SV=1
Length = 152
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFG 62
YF +GPQ + EG ++L+LF ++YP P VRF ++I V+ +
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRIC----LD 89
Query: 63 LLVN-WQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDV 104
+L + W + +L ++ ++AP+ P+ P DV
Sbjct: 90 ILKDKWSPALQIRTVLLSIQALLSAPN-------PDDPLANDV 125
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 4 YFPFFFSGP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFG 62
YF +GP + EG +++L+LF +DYP P VRF ++I ++ +
Sbjct: 34 YFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRIC----LD 89
Query: 63 LLVN-WQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDV 104
+L + W + IL ++ ++AP+ P+ P DV
Sbjct: 90 VLKDKWSPALQIRTILLSIQALLSAPN-------PDDPLANDV 125
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 1 MVNYFPFFFSGPQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKK 60
++++ F T +G ++L L +DYP KPP VRF SR+ + + +
Sbjct: 33 IMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSIC---- 88
Query: 61 FGLLVN-WQREYTMEDILTQLKKEMAAPH 88
+L N W Y + +LT ++ + P+
Sbjct: 89 LDILQNQWSPIYDVAAVLTSIQSLLCDPN 117
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 11 GP-QTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQ 68
GP T E ++L + ++YP KPP+VRF S++ V + G+ +L N W
Sbjct: 42 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGIC----LDILQNRWS 97
Query: 69 REYTMEDILTQLKKEMAAPH 88
Y + ILT ++ ++ P+
Sbjct: 98 PTYDVSAILTSIQSLLSDPN 117
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREY 71
P +V+EG ++ L + DYP KPP V F +RI +N + GV+ L NW
Sbjct: 101 PGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVICLDI--LKDNWSPAL 157
Query: 72 TMEDILTQL 80
T+ +L +
Sbjct: 158 TISKVLLSI 166
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREY 71
P +V+EG ++ L + DYP KPP V F +RI +N + GV+ L NW
Sbjct: 101 PGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVICLDI--LKDNWSPAL 157
Query: 72 TMEDILTQL 80
T+ +L +
Sbjct: 158 TISKVLLSI 166
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREY 71
P +V+EG ++ L + DYP KPP V F +RI +N + GV+ L NW
Sbjct: 101 PGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVICLDI--LKDNWSPAL 157
Query: 72 TMEDILTQL 80
T+ +L +
Sbjct: 158 TISKVLLSI 166
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 9 FSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-N 66
GP+ TV+E Y+L L DYP KPP V+F + V+ + +L N
Sbjct: 66 LDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNIC----LDILKEN 121
Query: 67 WQREYTMEDILTQLKKEMAAPHN 89
W Y + IL L+ + P+N
Sbjct: 122 WTASYDVRTILLSLQSLLGEPNN 144
>sp|Q5R7J6|UBE2N_PONAB Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2
SV=1
Length = 152
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF +GPQ + EG ++L+LF ++YP P VRF ++I
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 75
>sp|P61089|UBE2N_MOUSE Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1
SV=1
Length = 152
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF +GPQ + EG ++L+LF ++YP P VRF ++I
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 75
>sp|P61088|UBE2N_HUMAN Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1
SV=1
Length = 152
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF +GPQ + EG ++L+LF ++YP P VRF ++I
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 75
>sp|Q0P5K3|UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2
SV=1
Length = 152
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF +GPQ + EG ++L+LF ++YP P VRF ++I
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 75
>sp|Q9EQX9|UBE2N_RAT Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n
PE=1 SV=1
Length = 152
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 YFPFFFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 44
YF +GPQ + EG ++L+LF ++YP P VRF ++I
Sbjct: 34 YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 75
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQRE 70
P +V+EG ++ L + DYP KPP V F +RI +N + GV+ +L NW
Sbjct: 95 PGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GVI---CLDILKDNWSPA 150
Query: 71 YTMEDILTQL 80
T+ +L +
Sbjct: 151 LTISKVLLSI 160
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQRE 70
P +V+EG ++ L + DYP KPP V F +RI +N + GV+ +L NW
Sbjct: 95 PGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GVI---CLDILKDNWSPA 150
Query: 71 YTMEDILTQL 80
T+ +L +
Sbjct: 151 LTISKVLLSI 160
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 14 TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYT 72
TV EG Y+L L DYP KPP V+F + C + V +L + W Y
Sbjct: 77 TVFEGTEYRLSLSFSNDYPFKPPKVKFET----CCFHPNVDVYGNICLDILQDKWSSAYD 132
Query: 73 MEDILTQLKKEMAAPH 88
+ IL ++ + P+
Sbjct: 133 VRTILLSIQSLLGEPN 148
>sp|P52484|UBC21_CAEEL Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis
elegans GN=ubc-21 PE=3 SV=3
Length = 214
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 8 FFSGPQ-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN 66
F GP+ T + G +++K+ + YP +PP +F +RI ++ +TG + +L +
Sbjct: 56 FIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKAKFVTRIWHPNISSQTGTI---CLDILKD 112
Query: 67 -WQREYTMEDILTQLKKEMAAPH 88
W T+ +L L+ + +P
Sbjct: 113 KWTASLTLRTVLLSLQAMLCSPE 135
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQRE 70
P +V+EG ++ L + +YP KPP V F +RI +N + GV+ +L NW
Sbjct: 126 PGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVI---CLDILKDNWSPA 181
Query: 71 YTMEDILTQL 80
T+ +L +
Sbjct: 182 LTISKVLLSI 191
>sp|P34477|UBC7_CAEEL Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis
elegans GN=ubc-7 PE=1 SV=1
Length = 164
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 12 PQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 55
P T++EG ++ L +DYP+KPP ++F S I ++ E V
Sbjct: 44 PDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNV 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,091,585
Number of Sequences: 539616
Number of extensions: 1730061
Number of successful extensions: 3654
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 3514
Number of HSP's gapped (non-prelim): 198
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)