Query 033891
Match_columns 109
No_of_seqs 95 out of 106
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 12:22:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033891.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033891hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n1jb_ a.22.1.3 (B:) Nuclear 97.1 0.00074 5.4E-08 42.0 6.1 51 54-104 15-65 (78)
2 d1ku5a_ a.22.1.2 (A:) Archaeal 97.0 0.00074 5.4E-08 40.9 5.3 47 56-102 18-64 (66)
3 d1jfia_ a.22.1.3 (A:) Negative 96.9 0.00074 5.4E-08 41.1 4.8 48 54-101 17-64 (66)
4 d1htaa_ a.22.1.2 (A:) Archaeal 96.8 0.0018 1.3E-07 39.2 6.1 48 57-104 20-67 (68)
5 d1n1ja_ a.22.1.3 (A:) Nuclear 96.6 0.0036 2.6E-07 39.7 6.6 52 54-105 18-69 (87)
6 d1h3ob_ a.22.1.3 (B:) TAF(II)- 96.2 0.01 7.3E-07 37.7 6.9 58 38-102 9-66 (74)
7 d2bykb1 a.22.1.3 (B:11-99) Chr 96.1 0.01 7.5E-07 37.6 6.9 54 54-107 15-68 (89)
8 d1f1ea_ a.22.1.2 (A:) Archaeal 95.7 0.011 7.7E-07 41.0 6.0 52 54-105 93-144 (151)
9 d1jfib_ a.22.1.3 (B:) Negative 95.3 0.028 2E-06 38.2 6.8 51 55-105 20-70 (135)
10 d2byka1 a.22.1.3 (A:29-100) Ch 94.5 0.064 4.7E-06 32.9 6.3 49 54-102 6-55 (72)
11 d2huec1 a.22.1.1 (C:20-101) Hi 93.4 0.078 5.6E-06 33.4 5.2 47 56-102 25-71 (82)
12 d1w5sa2 c.37.1.20 (A:7-293) CD 91.1 0.34 2.5E-05 32.4 6.5 49 56-104 229-286 (287)
13 d1f1ea_ a.22.1.2 (A:) Archaeal 90.6 0.37 2.7E-05 32.8 6.5 47 56-102 18-64 (151)
14 d1fnna2 c.37.1.20 (A:1-276) CD 89.5 0.62 4.5E-05 30.8 6.8 51 57-107 213-275 (276)
15 d1khya_ a.174.1.1 (A:) N-termi 78.5 0.79 5.7E-05 28.8 3.0 27 74-100 7-33 (139)
16 d1bh9b_ a.22.1.3 (B:) TAF(II)2 75.8 5.6 0.00041 25.2 6.7 50 56-105 32-82 (89)
17 d1q9ca_ a.22.1.3 (A:) Histone 73.5 3.6 0.00026 28.9 5.7 46 56-101 115-160 (172)
18 d1k6ka_ a.174.1.1 (A:) N-termi 68.1 1.5 0.00011 27.5 2.4 29 74-102 6-34 (142)
19 d1f66c_ a.22.1.1 (C:) Histone 63.7 7.8 0.00057 24.8 5.4 46 56-101 29-74 (103)
20 d1qvra1 a.174.1.1 (A:4-148) N- 61.8 2.6 0.00019 27.3 2.7 27 74-100 7-33 (145)
21 d1ixsb2 c.37.1.20 (B:4-242) Ho 57.8 9.5 0.00069 25.2 5.2 54 55-108 182-238 (239)
22 d1qvra1 a.174.1.1 (A:4-148) N- 51.3 5.2 0.00038 25.8 2.8 25 75-99 85-109 (145)
23 d1khya_ a.174.1.1 (A:) N-termi 49.6 6.4 0.00047 24.3 3.0 24 76-99 86-109 (139)
24 d1k94a_ a.39.1.8 (A:) Grancalc 47.8 31 0.0023 22.2 9.8 83 12-105 2-99 (165)
25 d1k6ka_ a.174.1.1 (A:) N-termi 47.2 6.2 0.00046 24.4 2.6 25 74-98 84-108 (142)
26 d1in4a2 c.37.1.20 (A:17-254) H 46.1 33 0.0024 22.2 6.5 52 57-108 183-237 (238)
27 d1ny5a2 c.37.1.20 (A:138-384) 44.5 22 0.0016 24.5 5.6 41 54-101 198-246 (247)
28 d1u35c1 a.22.1.1 (C:814-919) m 44.4 24 0.0017 22.6 5.3 46 55-100 27-72 (106)
29 d1tzyc_ a.22.1.1 (C:) Histone 39.6 39 0.0028 21.0 5.7 45 55-99 41-85 (95)
30 d2fcea1 a.39.1.5 (A:84-144) Ca 39.5 13 0.00093 20.3 2.9 31 77-107 2-32 (61)
31 d2mysb_ a.39.1.5 (B:) Myosin E 38.7 15 0.0011 22.5 3.5 30 76-105 77-106 (145)
32 d1bh9a_ a.22.1.3 (A:) TAF(II)1 38.4 27 0.0019 19.2 4.2 26 58-83 19-44 (45)
33 d1fw4a_ a.39.1.5 (A:) Calmodul 36.7 14 0.001 20.3 2.8 29 78-106 5-33 (65)
34 d2hf5a1 a.39.1.5 (A:81-113) Tr 35.0 12 0.00087 19.4 2.1 27 79-105 6-32 (33)
35 d1tzya_ a.22.1.1 (A:) Histone 34.2 49 0.0036 21.0 5.6 45 56-100 29-73 (106)
36 d1r6bx2 c.37.1.20 (X:169-436) 30.8 28 0.0021 24.9 4.3 51 55-105 202-265 (268)
37 d1sxjd2 c.37.1.20 (D:26-262) R 30.0 56 0.0041 20.7 5.4 49 54-103 183-236 (237)
38 d1tafb_ a.22.1.3 (B:) TAF(II)6 28.3 57 0.0041 19.5 6.3 46 57-102 23-68 (70)
39 d1njfa_ c.37.1.20 (A:) delta p 27.9 17 0.0013 24.3 2.5 46 57-103 193-238 (239)
40 d1wlza1 a.39.1.7 (A:229-311) D 24.5 56 0.0041 18.1 5.4 31 76-106 20-50 (83)
41 d2gdta1 d.346.1.1 (A:2-116) Ns 24.3 13 0.00092 24.2 1.2 29 74-105 23-52 (115)
42 d1c7va_ a.39.1.5 (A:) Calcium 22.2 14 0.001 20.7 0.9 29 78-106 4-32 (68)
43 d1jc2a_ a.39.1.5 (A:) Troponin 21.1 31 0.0023 19.3 2.4 22 84-105 17-38 (75)
44 d1tiza_ a.39.1.5 (A:) Calmodul 20.2 29 0.0021 18.8 2.1 22 84-105 9-30 (67)
No 1
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07 E-value=0.00074 Score=41.99 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=46.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhh
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQ 104 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQ 104 (109)
+.++|++||..++++..++||.+-+..|...|+.++...|..+||-+.+-+
T Consensus 15 ~~~~is~ea~~~i~~a~E~Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~ 65 (78)
T d1n1jb_ 15 DVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITK 65 (78)
T ss_dssp TCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTT
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhc
Confidence 567899999999999999999999999999999999999999999887654
No 2
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=96.97 E-value=0.00074 Score=40.93 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=44.4
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
.+|++||..++.+.++.|+..-..+|...++..+-..|..+|++..+
T Consensus 18 ~ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al 64 (66)
T d1ku5a_ 18 ERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAI 64 (66)
T ss_dssp SEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 48999999999999999999999999999999999999999999865
No 3
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.89 E-value=0.00074 Score=41.10 Aligned_cols=48 Identities=13% Similarity=0.289 Sum_probs=41.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHh
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERI 101 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKI 101 (109)
+.++||+||.-++++.+++|+.+-+..|...++..+...|..+||...
T Consensus 17 ~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krktI~~~dl~~a 64 (66)
T d1jfia_ 17 EIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQC 64 (66)
T ss_dssp TCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTT
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHH
Confidence 456899999999999999999999999999999888889999999754
No 4
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=96.81 E-value=0.0018 Score=39.17 Aligned_cols=48 Identities=19% Similarity=0.177 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhh
Q 033891 57 SANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQ 104 (109)
Q Consensus 57 kIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQ 104 (109)
+|++||..++++-++.|+.+-+..|...++..+-..|+.+|+...+-.
T Consensus 20 ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 20 RVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 699999999999999999999999999999999999999999987643
No 5
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59 E-value=0.0036 Score=39.68 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=47.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
+.++||+||..++++-.++||..-...|...+..++...|..+|+-+.+-++
T Consensus 18 ~~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~ 69 (87)
T d1n1ja_ 18 QTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTL 69 (87)
T ss_dssp TTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHT
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHc
Confidence 4678999999999999999999999999999999999999999998877664
No 6
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.18 E-value=0.01 Score=37.75 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=50.4
Q ss_pred HHHHhhhccCCCccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 38 SEFLLHQAGAGTSKKNRPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 38 ~e~~~~~~~~~~s~k~~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
...|..++.+++ .+.+++-.++.++.+-||.-.+.+|...|+-+++..|++.|++-+|
T Consensus 9 L~eLv~~idp~~-------~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s~~le~kDvql~L 66 (74)
T d1h3ob_ 9 LQDLVREVDPNE-------QLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHL 66 (74)
T ss_dssp HHHHHHHHCSSC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHH
T ss_pred HHHHHHHhCCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 345666776544 6899999999999999999999999999999999999999988765
No 7
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.14 E-value=0.01 Score=37.63 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=48.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhhhhc
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQLLL 107 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQLLL 107 (109)
+.++|++||+.++++-..+||.--...|...++.++-..|..+|+-+.+-+|=+
T Consensus 15 ~~~~iskeA~~~i~~aae~FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~~f 68 (89)
T d2bykb1 15 ESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDF 68 (89)
T ss_dssp TTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHCCc
Confidence 567899999999999999999999999999999999999999999888776543
No 8
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=95.73 E-value=0.011 Score=40.97 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=46.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
...||++||+.++++.++.|+.|-+..|...|...+-..|..+|+...+-..
T Consensus 93 g~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~ 144 (151)
T d1f1ea_ 93 GIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITYS 144 (151)
T ss_dssp TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHc
Confidence 3468999999999999999999999999999999999999999999866443
No 9
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.30 E-value=0.028 Score=38.23 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=46.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 55 PTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 55 ~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
.++|++||..++++-..+||..-...|...+..++-..|..+|+-+.+-.|
T Consensus 20 ~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~ 70 (135)
T d1jfib_ 20 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESL 70 (135)
T ss_dssp TCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHc
Confidence 358999999999999999999999999999999999999999998877554
No 10
>d2byka1 a.22.1.3 (A:29-100) Chrac-16 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.45 E-value=0.064 Score=32.88 Aligned_cols=49 Identities=14% Similarity=0.124 Sum_probs=41.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCccccchHHHhh
Q 033891 54 RPTSANANALKLSCELLRVFVTEAVQRAAAIAEAE-GVSKIEATHLERIL 102 (109)
Q Consensus 54 ~~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~E-g~~~levehLEKIl 102 (109)
+-.+||++|.-++++-.++||.+-+.+|..++... +...|...||.++.
T Consensus 6 dv~~is~ea~~lvskAtElFi~~L~~~a~~~a~~~~~~ktl~~~dl~~aV 55 (72)
T d2byka1 6 DTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVV 55 (72)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccHHHHHHHH
Confidence 34579999999999999999999999999887544 44679999998754
No 11
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=93.35 E-value=0.078 Score=33.35 Aligned_cols=47 Identities=15% Similarity=0.207 Sum_probs=42.8
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
.|||+|+...+.+.++.|++|.+..|...++-.+-..|+.+|+.-.|
T Consensus 25 ~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Al 71 (82)
T d2huec1 25 KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYAL 71 (82)
T ss_dssp CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHH
Confidence 47999999999999999999999999999988888889999987665
No 12
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=91.05 E-value=0.34 Score=32.37 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=37.3
Q ss_pred CccchHHHHHHHHHHHH---------HHHHHHHHHHHHHHhhCCCccccchHHHhhhh
Q 033891 56 TSANANALKLSCELLRV---------FVTEAVQRAAAIAEAEGVSKIEATHLERILPQ 104 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~i---------FV~EAv~RA~~eA~~Eg~~~levehLEKIlPQ 104 (109)
..++++++.+++++... -+...+.+|+..|..+|...|+.+|+++.+.|
T Consensus 229 ~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 229 TVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp TSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 34789999999886521 23345567777888899999999999998764
No 13
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=90.61 E-value=0.37 Score=32.77 Aligned_cols=47 Identities=13% Similarity=0.226 Sum_probs=43.4
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
.+||+||...+.+++.-|...-...|...++..+-..|..+|++..+
T Consensus 18 ~ris~da~~~l~~~~~~~~~~Ia~eA~~l~~~~~rKTi~~edi~~a~ 64 (151)
T d1f1ea_ 18 RRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALA 64 (151)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 48999999999999999999999999999998888999999998863
No 14
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=89.54 E-value=0.62 Score=30.84 Aligned_cols=51 Identities=16% Similarity=0.302 Sum_probs=36.3
Q ss_pred ccchHHHHHHHHHHHH------------HHHHHHHHHHHHHHhhCCCccccchHHHhhhhhhc
Q 033891 57 SANANALKLSCELLRV------------FVTEAVQRAAAIAEAEGVSKIEATHLERILPQLLL 107 (109)
Q Consensus 57 kIs~dAl~L~aeyL~i------------FV~EAv~RA~~eA~~Eg~~~levehLEKIlPQLLL 107 (109)
.++.+++++++++... -+...+.+|+..|..+|...|+.+|+++-+.++++
T Consensus 213 ~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~~ 275 (276)
T d1fnna2 213 SYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLF 275 (276)
T ss_dssp SSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHSC
T ss_pred cccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHhC
Confidence 3577777777765310 12334566777788889999999999998888764
No 15
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=78.55 E-value=0.79 Score=28.85 Aligned_cols=27 Identities=26% Similarity=0.209 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHhhCCCccccchHHH
Q 033891 74 VTEAVQRAAAIAEAEGVSKIEATHLER 100 (109)
Q Consensus 74 V~EAv~RA~~eA~~Eg~~~levehLEK 100 (109)
+++++..|...|...+..+|+++||=.
T Consensus 7 ~~~~l~~A~~~A~~~~h~~v~~eHlL~ 33 (139)
T d1khya_ 7 FQLALADAQSLALGHDNQFIEPLHLMS 33 (139)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHH
Confidence 578999999999999999999999854
No 16
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.84 E-value=5.6 Score=25.18 Aligned_cols=50 Identities=24% Similarity=0.369 Sum_probs=40.5
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCccccchHHHhhhhh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAE-GVSKIEATHLERILPQL 105 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~E-g~~~levehLEKIlPQL 105 (109)
++|+++.+.+++-+-++||-|-|..|....... +.+-|.++||-.-.-.|
T Consensus 32 ~sv~~~v~i~v~giaKvFvGEiVE~A~~V~~~~~e~~PL~P~HireA~rrl 82 (89)
T d1bh9b_ 32 TSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRL 82 (89)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHH
Confidence 358999999999999999999999998875443 45689999997654433
No 17
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.45 E-value=3.6 Score=28.85 Aligned_cols=46 Identities=7% Similarity=0.028 Sum_probs=42.6
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERI 101 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKI 101 (109)
.||+.+|---++..|+.++.|-...|...|+.-+-..|.++||+.-
T Consensus 115 ~RVs~~A~vyLaavLEyl~aeILelAgn~a~~~krkrItp~dI~lA 160 (172)
T d1q9ca_ 115 YKIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEITKQDIKVA 160 (172)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBCCHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCceecHHHHHHH
Confidence 3899999999999999999999999999999888889999999853
No 18
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=68.14 E-value=1.5 Score=27.51 Aligned_cols=29 Identities=21% Similarity=0.101 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 74 VTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 74 V~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
+..++..|...|..-+..+|++|||=..+
T Consensus 6 l~~~l~~A~~~A~~~~h~~i~~EHLL~aL 34 (142)
T d1k6ka_ 6 LELSLNMAFARAREHRHEFMTVEHLLLAL 34 (142)
T ss_dssp HHHHHHHHHHHHHHHTBSEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHHHH
Confidence 56788899999999999999999996543
No 19
>d1f66c_ a.22.1.1 (C:) Histone H2A {Human (Homo sapiens), variant H2A.Z [TaxId: 9606]}
Probab=63.70 E-value=7.8 Score=24.79 Aligned_cols=46 Identities=22% Similarity=0.268 Sum_probs=41.1
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHh
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERI 101 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKI 101 (109)
-+|+..|---++..|+.++.|-...|...+++.+...|.++||+..
T Consensus 29 ~rv~~~A~VyLaAvLEYL~aEILelagn~a~~~~~~rItpr~l~la 74 (103)
T d1f66c_ 29 GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLA 74 (103)
T ss_dssp CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHH
T ss_pred eecCCCceeeHHHHHHHHHHHHHHHhhhhhccCCCCeeechhhhcc
Confidence 3589999999999999999999999999998888889999999864
No 20
>d1qvra1 a.174.1.1 (A:4-148) N-terminal domain of ClpB (heat shock protein F84.1) {Thermus thermophilus [TaxId: 274]}
Probab=61.79 E-value=2.6 Score=27.28 Aligned_cols=27 Identities=26% Similarity=0.286 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhhCCCccccchHHH
Q 033891 74 VTEAVQRAAAIAEAEGVSKIEATHLER 100 (109)
Q Consensus 74 V~EAv~RA~~eA~~Eg~~~levehLEK 100 (109)
+++++..|...|...+...|+++||=.
T Consensus 7 a~~~l~~A~~~A~~~~~~~i~~~HlL~ 33 (145)
T d1qvra1 7 AREALAQAQVLAQRMKHQAIDLPHLWA 33 (145)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHH
Confidence 578899999999999999999999854
No 21
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=57.84 E-value=9.5 Score=25.17 Aligned_cols=54 Identities=20% Similarity=0.090 Sum_probs=36.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHH---HHHHHHHHHhhCCCccccchHHHhhhhhhcC
Q 033891 55 PTSANANALKLSCELLRVFVTEA---VQRAAAIAEAEGVSKIEATHLERILPQLLLD 108 (109)
Q Consensus 55 ~TkIs~dAl~L~aeyL~iFV~EA---v~RA~~eA~~Eg~~~levehLEKIlPQLLLD 108 (109)
+.+++.+++..+++.-+-=+|-| +.++...++..+...|+.+++.+.+-.|-+|
T Consensus 182 ~i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~~a~~~~~~~It~~~~~~~l~~l~~D 238 (239)
T d1ixsb2 182 GVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLD 238 (239)
T ss_dssp CCCBCHHHHHHHHHHTTSSHHHHHHHHHHHHHHHTTSCCSCBCHHHHHHHHHHHTCC
T ss_pred CCccchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHhhhCcC
Confidence 34566777777776655322322 3445555666788999999999999887666
No 22
>d1qvra1 a.174.1.1 (A:4-148) N-terminal domain of ClpB (heat shock protein F84.1) {Thermus thermophilus [TaxId: 274]}
Probab=51.35 E-value=5.2 Score=25.75 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhhCCCccccchHH
Q 033891 75 TEAVQRAAAIAEAEGVSKIEATHLE 99 (109)
Q Consensus 75 ~EAv~RA~~eA~~Eg~~~levehLE 99 (109)
.+.+.+|...|+.-|+.+|.+|||=
T Consensus 85 ~~il~~A~~~a~~~gd~~Is~ehLl 109 (145)
T d1qvra1 85 SGALNRAEGLMEELKDRYVAVDTLV 109 (145)
T ss_dssp HHHHHHHHHHHHTTTCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccHHHHH
Confidence 4556788888888899999999984
No 23
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=49.63 E-value=6.4 Score=24.25 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhCCCccccchHH
Q 033891 76 EAVQRAAAIAEAEGVSKIEATHLE 99 (109)
Q Consensus 76 EAv~RA~~eA~~Eg~~~levehLE 99 (109)
..+.+|...|+.-|+.+|++|||=
T Consensus 86 ~vl~~A~~~a~~~~d~~I~~ehlL 109 (139)
T d1khya_ 86 RVLNLCDKLAQKRGDNFISSELFV 109 (139)
T ss_dssp HHHHHHHHHHHHHTCSSBCHHHHH
T ss_pred HHHHHHHHHHHHcCCCeecHHHHH
Confidence 344567777888899999999984
No 24
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.75 E-value=31 Score=22.19 Aligned_cols=83 Identities=13% Similarity=0.251 Sum_probs=45.2
Q ss_pred HHHHHHHHhhhhhhhhhhcCCCChhHHHHHhhhccCCCccCCCCCccchHHHHHH--------------HHHHHHHHHHH
Q 033891 12 IHAIFKHIWTRRSLERERNGGTDAMESEFLLHQAGAGTSKKNRPTSANANALKLS--------------CELLRVFVTEA 77 (109)
Q Consensus 12 i~~ifk~~w~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~k~~~TkIs~dAl~L~--------------aeyL~iFV~EA 77 (109)
+.++|+++ .. +.+..+..|...++...+... ..+.++.++++.+ .|++.++-...
T Consensus 2 ~~~~F~~~-a~------~dG~I~~~EL~~~L~~~g~~~----~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~ 70 (165)
T d1k94a_ 2 VYTYFSAV-AG------QDGEVDAEELQRCLTQSGING----TYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALN 70 (165)
T ss_dssp HHHHHHHH-HG------GGTSBCHHHHHHHHHHHTTTT----TSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred hHHHHHHh-cC------CCCCCCHHHHHHHHHHcCCCC----CcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccc
Confidence 45667666 22 234456666666666655322 2223344433322 34444443333
Q ss_pred HHHHHHH-HHhhCCCccccchHHHhhhhh
Q 033891 78 VQRAAAI-AEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 78 v~RA~~e-A~~Eg~~~levehLEKIlPQL 105 (109)
-.+.+.. ...+++|.|+.++|..++.++
T Consensus 71 ~~~~~F~~fD~d~sG~I~~~El~~~l~~~ 99 (165)
T d1k94a_ 71 AWKENFMTVDQDGSGTVEHHELRQAIGLM 99 (165)
T ss_dssp HHHHHHHHHCTTCCSBCCHHHHHHHHHHT
T ss_pred hhHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 3343333 345689999999999988765
No 25
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=47.15 E-value=6.2 Score=24.41 Aligned_cols=25 Identities=16% Similarity=0.331 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhhCCCccccchH
Q 033891 74 VTEAVQRAAAIAEAEGVSKIEATHL 98 (109)
Q Consensus 74 V~EAv~RA~~eA~~Eg~~~levehL 98 (109)
+...+.||..+|+.-++.+|++|||
T Consensus 84 l~~il~~A~~~a~~~~~~~i~~ehl 108 (142)
T d1k6ka_ 84 FQRVLQRAVFHVQSSGRNEVTGANV 108 (142)
T ss_dssp HHHHHHHHHHHHHSSSCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcchHHHH
Confidence 3455678999999999999999997
No 26
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=46.06 E-value=33 Score=22.19 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=32.9
Q ss_pred ccchHHHHHHHHHHHHHHHHH---HHHHHHHHHhhCCCccccchHHHhhhhhhcC
Q 033891 57 SANANALKLSCELLRVFVTEA---VQRAAAIAEAEGVSKIEATHLERILPQLLLD 108 (109)
Q Consensus 57 kIs~dAl~L~aeyL~iFV~EA---v~RA~~eA~~Eg~~~levehLEKIlPQLLLD 108 (109)
.++++++..++++-.-=.|-| +.++..++...+.+.|+.+.+.+.+-.|=.|
T Consensus 183 ~~~~~~l~~i~~~s~gd~R~ai~~l~~~~~~~~~~~~~~it~~~~~~al~~l~iD 237 (238)
T d1in4a2 183 EIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNID 237 (238)
T ss_dssp CBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHhhCCC
Confidence 456666666665533222222 3455556666788889999999988776444
No 27
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=44.46 E-value=22 Score=24.49 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=27.8
Q ss_pred CCCccchHHHHHHHHH--------HHHHHHHHHHHHHHHHHhhCCCccccchHHHh
Q 033891 54 RPTSANANALKLSCEL--------LRVFVTEAVQRAAAIAEAEGVSKIEATHLERI 101 (109)
Q Consensus 54 ~~TkIs~dAl~L~aey--------L~iFV~EAv~RA~~eA~~Eg~~~levehLEKI 101 (109)
+..+++++|++.+..| |+-++. ||+.. -.+..|+++||-.+
T Consensus 198 ~~~~ls~~al~~L~~~~WPGNl~EL~~~l~----~a~~~---~~~~~I~~~dl~~l 246 (247)
T d1ny5a2 198 EVEGFTKSAQELLLSYPWYGNVRELKNVIE----RAVLF---SEGKFIDRGELSCL 246 (247)
T ss_dssp CCCEECHHHHHHHHHSCCTTHHHHHHHHHH----HHHHH---CCSSEECHHHHHHH
T ss_pred CCCCCCHHHHHHHHhCCCCCHHHHHHHHHH----HHHHh---CCCCeECHHHcccc
Confidence 4567999999999887 444444 44433 24578999998543
No 28
>d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.35 E-value=24 Score=22.61 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=40.2
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHH
Q 033891 55 PTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLER 100 (109)
Q Consensus 55 ~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEK 100 (109)
..||+..|---++..|+.++.|-..-|-..++......|.++||..
T Consensus 27 ~~rv~~~apVylaAVLEYL~aEILELAgn~a~~~k~~rItprhi~l 72 (106)
T d1u35c1 27 KYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILL 72 (106)
T ss_dssp TSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHH
T ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHcCCCeeecchhhh
Confidence 3478888999999999999999999999998888888899999875
No 29
>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=39.59 E-value=39 Score=21.01 Aligned_cols=45 Identities=9% Similarity=0.023 Sum_probs=37.0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHH
Q 033891 55 PTSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLE 99 (109)
Q Consensus 55 ~TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLE 99 (109)
..+++++|+..+.+-.+.|+.+-+.-|..-|---+-..|.+.|+.
T Consensus 41 ~~r~~~~Al~aLQea~E~yLv~lfeda~~~a~HakRvTl~~kD~~ 85 (95)
T d1tzyc_ 41 DLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 85 (95)
T ss_dssp TCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHH
T ss_pred CCEeeHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCcCCHHHHH
Confidence 579999999999999999999999988877755555567777764
No 30
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.48 E-value=13 Score=20.25 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhhCCCccccchHHHhhhhhhc
Q 033891 77 AVQRAAAIAEAEGVSKIEATHLERILPQLLL 107 (109)
Q Consensus 77 Av~RA~~eA~~Eg~~~levehLEKIlPQLLL 107 (109)
-+.+|...-...++|+|+.++|.+++-.+-.
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~ 32 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGE 32 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTC
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCC
Confidence 3455666666678999999999998876543
No 31
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=38.68 E-value=15 Score=22.49 Aligned_cols=30 Identities=20% Similarity=0.371 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 76 EAVQRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 76 EAv~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
+-+.+|...-..++.+.|++++|.+++-.+
T Consensus 77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~~ 106 (145)
T d2mysb_ 77 DVIMGAFKVLDPDGKGSIKKSFLEELLTTG 106 (145)
T ss_pred HHHHHHHHhhhhcccchhhHHHHHHHHHHc
Confidence 345555555556788999999999988654
No 32
>d1bh9a_ a.22.1.3 (A:) TAF(II)18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.39 E-value=27 Score=19.16 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=23.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 033891 58 ANANALKLSCELLRVFVTEAVQRAAA 83 (109)
Q Consensus 58 Is~dAl~L~aeyL~iFV~EAv~RA~~ 83 (109)
=.++++.++-+.+.-|+.|-+++|.+
T Consensus 19 P~~ETv~llEdiv~~~i~~~~~~A~~ 44 (45)
T d1bh9a_ 19 PYTESVDILEDLVIEFITEMTHKAMS 44 (45)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999999999975
No 33
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=36.70 E-value=14 Score=20.25 Aligned_cols=29 Identities=21% Similarity=0.368 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhCCCccccchHHHhhhhhh
Q 033891 78 VQRAAAIAEAEGVSKIEATHLERILPQLL 106 (109)
Q Consensus 78 v~RA~~eA~~Eg~~~levehLEKIlPQLL 106 (109)
+.+|...-..+++|+|+.++|.+++-+|-
T Consensus 5 l~~aF~~fD~d~~G~I~~~el~~~l~~lg 33 (65)
T d1fw4a_ 5 IREAFRVFDKDGNGYISAAELRHVMTNLG 33 (65)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHHHHhC
Confidence 34444455567889999999998887763
No 34
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=35.03 E-value=12 Score=19.40 Aligned_cols=27 Identities=22% Similarity=0.411 Sum_probs=20.3
Q ss_pred HHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 79 QRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 79 ~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
..|...-..+|+++|+..+|..|+-.|
T Consensus 6 ~eAF~~FDkDg~G~Is~~EL~~vm~~l 32 (33)
T d2hf5a1 6 REAFRVFDKDGNGYISAAELRHVMTNL 32 (33)
T ss_dssp HHHHHHHSSSCCSCBCHHHHHHHTTSC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 334445566899999999999988654
No 35
>d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=34.24 E-value=49 Score=21.00 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=39.3
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHH
Q 033891 56 TSANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLER 100 (109)
Q Consensus 56 TkIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEK 100 (109)
-||+..|---++..|+.+..|-..-|-..|++..-..|.++||..
T Consensus 29 ~rv~~~apVylaAVLEYLtaEiLELAgn~a~~~k~~rItPrhi~l 73 (106)
T d1tzya_ 29 ERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQL 73 (106)
T ss_dssp SEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHH
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHhhHHHHhcCCceecchhhhh
Confidence 478888999999999999999999998888888888899999874
No 36
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=30.79 E-value=28 Score=24.85 Aligned_cols=51 Identities=18% Similarity=0.313 Sum_probs=33.0
Q ss_pred CCccchHHHHHHHHHHHHH-------------HHHHHHHHHHHHHhhCCCccccchHHHhhhhh
Q 033891 55 PTSANANALKLSCELLRVF-------------VTEAVQRAAAIAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 55 ~TkIs~dAl~L~aeyL~iF-------------V~EAv~RA~~eA~~Eg~~~levehLEKIlPQL 105 (109)
+.+++.+|+..+.+|-+-| +-||++|+.-.-..+....|+.+|+++++-++
T Consensus 202 ~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdllDea~a~~~~~~~~~~~~~i~~~di~~~i~~~ 265 (268)
T d1r6bx2 202 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 265 (268)
T ss_dssp TCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHH
T ss_pred CEEeChHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHhhccccCcccCCHHHHHHHHHHH
Confidence 3467888777666665554 56777665543222344568999999987654
No 37
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.05 E-value=56 Score=20.72 Aligned_cols=49 Identities=22% Similarity=0.235 Sum_probs=30.4
Q ss_pred CCCccchHHHHHHHHH----HHHHHHHHHHHHHHHHHhhC-CCccccchHHHhhh
Q 033891 54 RPTSANANALKLSCEL----LRVFVTEAVQRAAAIAEAEG-VSKIEATHLERILP 103 (109)
Q Consensus 54 ~~TkIs~dAl~L~aey----L~iFV~EAv~RA~~eA~~Eg-~~~levehLEKIlP 103 (109)
.+.+|++++++.++++ +|.-+. ...+++..++..+ +..|+.++++++++
T Consensus 183 e~i~i~~~~l~~ia~~s~gd~R~ai~-~L~~~~~~~~~~~~~~~It~~~i~e~~g 236 (237)
T d1sxjd2 183 ENVKCDDGVLERILDISAGDLRRGIT-LLQSASKGAQYLGDGKNITSTQVEELAG 236 (237)
T ss_dssp TTCCCCHHHHHHHHHHTSSCHHHHHH-HHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred hcCcCCHHHHHHHHHHcCCCHHHHHH-HHHHHHHhchhcCCCCccCHHHHHHhhC
Confidence 3446788888888877 332221 2334444444443 45699999999875
No 38
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=28.33 E-value=57 Score=19.45 Aligned_cols=46 Identities=22% Similarity=0.194 Sum_probs=38.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhh
Q 033891 57 SANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERIL 102 (109)
Q Consensus 57 kIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIl 102 (109)
+++.|+.+.+++=+..=++|.+.-|.+.-+.--...++.+|+...|
T Consensus 23 ~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~AL 68 (70)
T d1tafb_ 23 SLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSL 68 (70)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHH
Confidence 4899999999999999999999999887655556789988887654
No 39
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=27.93 E-value=17 Score=24.26 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=27.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccchHHHhhh
Q 033891 57 SANANALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILP 103 (109)
Q Consensus 57 kIs~dAl~L~aeyL~iFV~EAv~RA~~eA~~Eg~~~levehLEKIlP 103 (109)
+++++++..++.+-+==+|.|+ ...+++-..+.+.|+.+|++.+++
T Consensus 193 ~~~~~~l~~i~~~s~Gd~R~ai-n~l~~~~~~~~~~I~~~~v~~~lg 238 (239)
T d1njfa_ 193 AHEPRALQLLARAAEGSLRDAL-SLTDQAIASGDGQVSTQAVSAMLG 238 (239)
T ss_dssp CBCHHHHHHHHHHTTTCHHHHH-HHHHHHHHHTTTSBCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCHHHHH-HHHHHHHHhCCCCcCHHHHHHHhC
Confidence 4667777666554221122222 223344456778899999999875
No 40
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.55 E-value=56 Score=18.10 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhhCCCccccchHHHhhhhhh
Q 033891 76 EAVQRAAAIAEAEGVSKIEATHLERILPQLL 106 (109)
Q Consensus 76 EAv~RA~~eA~~Eg~~~levehLEKIlPQLL 106 (109)
..+.++......+++|.|+.++|.+++-.+-
T Consensus 20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~ 50 (83)
T d1wlza1 20 HAITQEFENFDTMKTNTISREEFRAICNRRV 50 (83)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCceEChhHHHHHHHHhC
Confidence 3455555555567899999999999987664
No 41
>d2gdta1 d.346.1.1 (A:2-116) Nsp1 {SARS coronavirus [TaxId: 227859]}
Probab=24.30 E-value=13 Score=24.15 Aligned_cols=29 Identities=38% Similarity=0.527 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhhCCCccccchHHH-hhhhh
Q 033891 74 VTEAVQRAAAIAEAEGVSKIEATHLER-ILPQL 105 (109)
Q Consensus 74 V~EAv~RA~~eA~~Eg~~~levehLEK-IlPQL 105 (109)
|-||..-|-+--++--++.++ ||| ++|||
T Consensus 23 veealsearehlkngtcglve---lekgvlpql 52 (115)
T d2gdta1 23 VEEALSEAREHLKNGTCGLVE---LEKGVLPQL 52 (115)
T ss_dssp HHHHHHHHHHHHHHTCEEEEC---CCTTSGGGS
T ss_pred HHHHHHHHHHHhhCCcceeEE---ecccccccc
Confidence 456666665555554455554 566 89997
No 42
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Probab=22.21 E-value=14 Score=20.66 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhCCCccccchHHHhhhhhh
Q 033891 78 VQRAAAIAEAEGVSKIEATHLERILPQLL 106 (109)
Q Consensus 78 v~RA~~eA~~Eg~~~levehLEKIlPQLL 106 (109)
+.++...-...++|.|+.++|.+++..+.
T Consensus 4 l~~~F~~~D~d~~G~I~~~el~~~l~~~g 32 (68)
T d1c7va_ 4 ILRAFKVFDANGDGVIDFDEFKFIMQKVG 32 (68)
T ss_dssp HHHHHHHHSCSGGGEECHHHHHHHSSTTT
T ss_pred HHHHHHHHcCCCcCeEcHHHHHHHHHHhC
Confidence 34444454556788888888888876663
No 43
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.13 E-value=31 Score=19.32 Aligned_cols=22 Identities=23% Similarity=0.229 Sum_probs=15.9
Q ss_pred HHHhhCCCccccchHHHhhhhh
Q 033891 84 IAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 84 eA~~Eg~~~levehLEKIlPQL 105 (109)
.-..+++|+|+.++|.+++-.|
T Consensus 17 ~fD~~~~G~I~~~el~~~l~~l 38 (75)
T d1jc2a_ 17 IFDKNADGFIDIEELGEILRAT 38 (75)
T ss_dssp HHCCSTTSSEEHHHHHHHHHHS
T ss_pred HHcCCCcCeEcHHHHHHHHHhc
Confidence 3345678888888888887665
No 44
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.16 E-value=29 Score=18.84 Aligned_cols=22 Identities=5% Similarity=0.075 Sum_probs=12.8
Q ss_pred HHHhhCCCccccchHHHhhhhh
Q 033891 84 IAEAEGVSKIEATHLERILPQL 105 (109)
Q Consensus 84 eA~~Eg~~~levehLEKIlPQL 105 (109)
.....++|.|+..+|..++-.+
T Consensus 9 ~~D~d~~G~I~~~El~~~l~~l 30 (67)
T d1tiza_ 9 KFDKNKDGKLSLDEFREVALAF 30 (67)
T ss_dssp HHCTTSSSCEEHHHHHHHHHHT
T ss_pred HHCCCCcCcCcHHHHHHHHHHh
Confidence 3334566666666666665543
Done!