BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033897
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 100/109 (91%), Positives = 106/109 (97%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+
Sbjct: 37 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHD 96
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
TGVV+ KKFG+L NWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 97 TGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 99/109 (90%), Positives = 103/109 (94%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHE
Sbjct: 38 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHE 97
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
TGVV+PKKFGLL NWQREYTMEDIL QLKKEM+ HNRKLVQPPEGT F
Sbjct: 98 TGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 89/106 (83%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
MDD DDIYM+SWTGTI+GP NT +EG+I+QLKLFC K+YPE PP+VRF +RINM CVN E
Sbjct: 36 MDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPE 95
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 106
TGVVEP F +L NW+REYTMEDIL +LKKEM HNRKL QPPEG
Sbjct: 96 TGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEG 141
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 87/107 (81%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
MDD DDI M+SWTGTI+GPHNT +EG+I+QLKLFC KDYPE PP+VRF SRINM CVN E
Sbjct: 36 MDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPE 95
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGT 107
GVV+P F +L NW+RE+TMED+L QLKKEM + NRKL QP EG
Sbjct: 96 NGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLEGN 142
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 81/109 (74%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++ DDI + SW GTIIGP NT + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN +
Sbjct: 30 LESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQ 89
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+PK +L NW + +++IL++L++EM++ N+KLVQPPEG F
Sbjct: 90 NGVVDPKNLPILSNWTSKNRIQNILSELRREMSSSSNKKLVQPPEGANF 138
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 76/109 (69%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
+ + DDI + W TI+GP ++VHE RIY LK+ CD +YP+ PP V F SRIN+ V+ E
Sbjct: 30 LTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGE 89
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
TG V P K L +W+REY+ME +L LKKEMA+ NRKL QPPEG+ F
Sbjct: 90 TGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGSTF 138
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
+ D DDI M W GTI+GP ++ HE RIY L + C +YP+ PP V F S+IN+ CVN
Sbjct: 30 LADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPT 89
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
TG V+ F L +W+R YTME +L L+KEMA P N+KL QP EG F
Sbjct: 90 TGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 137
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T++E RIY LK+ C YPE PPSVRF +R+NM+ V+
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSS 96
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+P+ +L WQ ++++ IL +L++ M + N KL QPPEG +
Sbjct: 97 NGVVDPRATAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+P+ +L WQ ++++ +L +L++ M + N KL QPPEG +
Sbjct: 95 NGVVDPRAISVLAKWQNSFSIKVVLQELRRLMMSKENMKLPQPPEGQCY 143
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 72/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PPSVRF ++INM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
+G+V+ + +L WQ Y+++ IL +L++ M + N KL QPPEG +
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVILQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T++E RIY LK+ C PE PP VRF ++INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKCPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PPSVRF ++INM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
+G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PPSVRF ++INM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
+G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PPSVRF ++INM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
+G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PPSVRF ++INM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
+G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 71/109 (65%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PP+VRF ++INM +N+
Sbjct: 34 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPTVRFVTKINMNGINNS 93
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 94 NGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 142
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 71/109 (65%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY LK+ C YPE PP+VRF ++I+M +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
G+V+ + +L WQ Y+++ +L +L++ M + N KL QPPEG +
Sbjct: 95 NGMVDARSIPILAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%)
Query: 1 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHE 60
++D +D+ + WTG IIGP T +E RIY L+L C YPE PP+VRF +++NM +N+
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNS 94
Query: 61 TGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 109
G V+ + +L WQ ++++ +L +L++ M + N KL QPPEG +
Sbjct: 95 NGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEGQTY 143
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 5 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 64
DD + WT I GP T +EG ++QL + YP +PP VRF ++I V+ +TG +
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
Query: 65 EPKKFGLLVN-WQREYTMEDILTQLKKEMAAPH 96
+L N W +T++ + + MA P
Sbjct: 90 ---CLDILKNAWSPAWTLQSVCRAIIALMAHPE 119
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GV 137
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 138 I---CLDILKDNWSPALTISKVLLSI 160
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GV 137
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 138 I---CLDILKDNWSPALTISKVLLSI 160
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 3 DGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETG 62
DGD+++ W T+ GP +TV+E Y+L L DYP KPP V+F + V+
Sbjct: 55 DGDNLF--KWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGN 112
Query: 63 VVEPKKFGLLV-NWQREYTMEDILTQLKKEMAAPHN 97
+ +L NW Y + IL L+ + P+N
Sbjct: 113 IC----LDILKENWTASYDVRTILLSLQSLLGEPNN 144
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 12 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGL 71
W I GPH+T E ++L + ++YP KPP+VRF S++ V + G+ +
Sbjct: 36 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGIC----LDI 91
Query: 72 LVN-WQREYTMEDILTQLKKEMAAPH 96
L N W Y + ILT ++ ++ P+
Sbjct: 92 LQNRWSPTYDVSAILTSIQSLLSDPN 117
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD++Y W TI+GP +V+EG ++ L + +YP KPP V F +RI +N + GV
Sbjct: 112 GDNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GV 168
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 169 I---CLDILKDNWSPALTISKVLLSI 191
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + +YP KPP V F +RI +N + GV
Sbjct: 73 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GV 129
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 130 I---CLDILKDNWSPALTISKVLLSI 152
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GD+IY W TI+GP +V+EG ++ L + +YP KPP V F +RI +N + GV
Sbjct: 73 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GV 129
Query: 64 VEPKKFGLLV-NWQREYTMEDILTQL 88
+ +L NW T+ +L +
Sbjct: 130 I---CLDILKDNWSPALTISKVLLSI 152
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 3 DGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETG 62
DG++I+ W GTI GP NTV+ G+ Y+L L YP P V+F + +C +
Sbjct: 57 DGENIF--KWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLT----SCFHPNVD 110
Query: 63 VVEPKKFGLLVN-WQREYTMEDILTQLKKEMAAPHN 97
+ +L + W Y + IL ++ + P+N
Sbjct: 111 LQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNN 146
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 12 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGL 71
W I GP +T +G ++L L +DYP KPP+VRF SR+ + + + +
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDI 91
Query: 72 LVN-WQREYTMEDILTQLKKEMAAPH 96
L N W Y + ILT ++ + P+
Sbjct: 92 LQNQWSPIYDVAAILTSIQSLLCDPN 117
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 12 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGL 71
W I GP +T +G ++L L +DYP KPP+VRF SR+ + + + +
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDI 91
Query: 72 LVN-WQREYTMEDILTQLKKEMAAPH 96
L N W Y + ILT ++ + P+
Sbjct: 92 LQNQWSPIYDVAAILTSIQSLLCDPN 117
>sp|Q54XS6|UBE2C_DICDI Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium
discoideum GN=ube2c PE=3 SV=1
Length = 153
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 3 DGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETG 62
DGD+I+ +W GTI G +TV+E +++ L DYP KPP+V+F ++ V++
Sbjct: 31 DGDNIF--NWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGN 88
Query: 63 VVEPKKFGLLVN-WQREYTMEDILTQLKKEMAAPHNR 98
+ +L + W Y + +L ++ + P+N
Sbjct: 89 IC----LDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 12 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGL 71
W I GP +T +G ++L L +DYP KPP+VRF SR+ + + + +
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDI 91
Query: 72 LVN-WQREYTMEDILTQLKKEMAAPH 96
L N W Y + ILT ++ + P+
Sbjct: 92 LQNQWSPIYDVAAILTSIQSLLCDPN 117
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 5 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 64
D+I+ W GTI G +TV EG Y+L L DYP KPP V+F + C + V
Sbjct: 62 DNIFC--WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFET----CCFHPNVDVY 115
Query: 65 EPKKFGLLVN-WQREYTMEDILTQLKKEMAAPH 96
+L + W Y + IL ++ + P+
Sbjct: 116 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 148
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 52
GD++Y W TIIGP T +EG I+ L + DYP KPP + F +RI
Sbjct: 62 GDNLY--HWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRI 108
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 12 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGL 71
W I GP +T +G ++L L +DYP KPP+VRF SR+ + + + +
Sbjct: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDI 91
Query: 72 LVN-WQREYTMEDILTQLKKEMAAPH 96
L N W Y + ILT ++ + P+
Sbjct: 92 LQNQWSPIYDVAAILTSIQSLLCDPN 117
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 4 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 63
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 96
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,238,120
Number of Sequences: 539616
Number of extensions: 1827415
Number of successful extensions: 3716
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3461
Number of HSP's gapped (non-prelim): 264
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)