BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033900
MAPAKKGKSKAKSAGSTQSKIKTNDENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSD
EAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFVESVQVFFLNGFRG

High Scoring Gene Products

Symbol, full name Information P value
AT1G49170 protein from Arabidopsis thaliana 1.8e-23
3110040N11Rik
RIKEN cDNA 3110040N11 gene
protein from Mus musculus 9.4e-11
AT5G63440 protein from Arabidopsis thaliana 0.00012

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033900
        (109 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028511 - symbol:AT1G49170 "AT1G49170" species...   270  1.8e-23   1
MGI|MGI:1914540 - symbol:3110040N11Rik "RIKEN cDNA 311004...   150  9.4e-11   1
TAIR|locus:2167361 - symbol:AT5G63440 "AT5G63440" species...    97  0.00012   1


>TAIR|locus:2028511 [details] [associations]
            symbol:AT1G49170 "AT1G49170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016301
            eggNOG:NOG272639 HOGENOM:HOG000019209 KO:K09131 Gene3D:3.30.1200.10
            InterPro:IPR003746 Pfam:PF02594 SUPFAM:SSF69786 HAMAP:MF_00634
            EMBL:BT010491 EMBL:AK176668 IPI:IPI00538725 RefSeq:NP_175343.2
            UniGene:At.38289 ProteinModelPortal:Q6NQG5 SMR:Q6NQG5 STRING:Q6NQG5
            EnsemblPlants:AT1G49170.1 GeneID:841340 KEGG:ath:AT1G49170
            TAIR:At1g49170 InParanoid:Q6NQG5 OMA:RSEICGA PhylomeDB:Q6NQG5
            ProtClustDB:CLSN2680428 ArrayExpress:Q6NQG5 Genevestigator:Q6NQG5
            Uniprot:Q6NQG5
        Length = 126

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 53/73 (72%), Positives = 63/73 (86%)

Query:    18 QSKIKTNDENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEAN 77
             +S   T   + P+C+RL+ PSSV+ITIHAKPGSK+ SITDVSDEAVGVQIDAPA+DGEAN
Sbjct:    15 ESTTVTESSSFPTCLRLLTPSSVAITIHAKPGSKAASITDVSDEAVGVQIDAPARDGEAN 74

Query:    78 AALLEYMSSLIHV 90
             AALLEYMSS++ V
Sbjct:    75 AALLEYMSSVLGV 87


>MGI|MGI:1914540 [details] [associations]
            symbol:3110040N11Rik "RIKEN cDNA 3110040N11 gene"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] MGI:MGI:1914540
            EMBL:AK019261 EMBL:AK014163 EMBL:AK018003 EMBL:BC027500
            IPI:IPI00133585 RefSeq:NP_080353.1 UniGene:Mm.248391
            ProteinModelPortal:Q9CRC3 SMR:Q9CRC3 STRING:Q9CRC3
            PhosphoSite:Q9CRC3 PaxDb:Q9CRC3 PRIDE:Q9CRC3 DNASU:67290
            Ensembl:ENSMUST00000026092 GeneID:67290 KEGG:mmu:67290
            UCSC:uc009icm.1 eggNOG:NOG272639 GeneTree:ENSGT00390000012420
            HOGENOM:HOG000019209 HOVERGEN:HBG044578 InParanoid:Q9CRC3 KO:K09131
            OMA:PTEGEAN OrthoDB:EOG4M399Z NextBio:324132 Bgee:Q9CRC3
            CleanEx:MM_3110040N11RIK Genevestigator:Q9CRC3
            GermOnline:ENSMUSG00000025102 Gene3D:3.30.1200.10
            InterPro:IPR003746 Pfam:PF02594 SUPFAM:SSF69786 Uniprot:Q9CRC3
        Length = 126

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/61 (49%), Positives = 41/61 (67%)

Query:    36 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEF 95
             P   V+I IHAKPGS+  ++TD+S EAVGV I AP  +GEANA L  Y+S ++ +   + 
Sbjct:    32 PKGFVTIAIHAKPGSRQNAVTDLSTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDV 91

Query:    96 V 96
             V
Sbjct:    92 V 92


>TAIR|locus:2167361 [details] [associations]
            symbol:AT5G63440 "AT5G63440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR KO:K09131 Gene3D:3.30.1200.10
            InterPro:IPR003746 Pfam:PF02594 SUPFAM:SSF69786 UniGene:At.26254
            HAMAP:MF_00634 EMBL:AK118693 IPI:IPI00516606 RefSeq:NP_568972.2
            ProteinModelPortal:Q8GWQ6 SMR:Q8GWQ6 PRIDE:Q8GWQ6
            EnsemblPlants:AT5G63440.2 GeneID:836463 KEGG:ath:AT5G63440
            TAIR:At5g63440 HOGENOM:HOG000265504 InParanoid:Q8GWQ6 OMA:FMGRVLG
            PhylomeDB:Q8GWQ6 ProtClustDB:CLSN2680603 Genevestigator:Q8GWQ6
            Uniprot:Q8GWQ6
        Length = 232

 Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
 Identities = 24/75 (32%), Positives = 41/75 (54%)

Query:    22 KTN--DENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAA 79
             +TN  D  +P CI  +    V + I  +  ++  +IT V+ + V V + APA  GEAN  
Sbjct:   124 ETNPQDAPVPPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNE 183

Query:    80 LLEYMSSLIHVSVGE 94
             LLE+M  ++ + + +
Sbjct:   184 LLEFMGRVLGLRLSQ 198


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      109        96   0.00091  102 3  11 23  0.41    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  506 (54 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.78u 0.14s 10.92t   Elapsed:  00:00:00
  Total cpu time:  10.78u 0.14s 10.92t   Elapsed:  00:00:00
  Start:  Fri May 10 07:56:49 2013   End:  Fri May 10 07:56:49 2013

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