BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033900
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBP8|CO040_BOVIN UPF0235 protein C15orf40 homolog OS=Bos taurus PE=2 SV=1
Length = 126
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 11 AKSAGSTQSKIKTNDENLPSC--IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQID 68
A + G QSK + LP + + P VSI IHAKPGSK ++TDV+ EAV V I
Sbjct: 7 ATNKGKNQSK--EPERPLPPLGPVTVDPKGGVSIAIHAKPGSKQNAVTDVTTEAVSVAIA 64
Query: 69 APAKDGEANAALLEYMSSLIHVSVGEFV 96
AP +GEANA L Y+S ++ + + V
Sbjct: 65 APPTEGEANAELCRYLSKVLELRKSDVV 92
>sp|Q9CRC3|CO040_MOUSE UPF0235 protein C15orf40 homolog OS=Mus musculus PE=2 SV=1
Length = 126
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 8 KSKAKSAGSTQSKIKTNDENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQI 67
K+ A S G Q+K + P V+I IHAKPGS+ ++TD+S EAVGV I
Sbjct: 4 KAGATSKGKNQTKEPETAPPAAGPVATDPKGFVTIAIHAKPGSRQNAVTDLSTEAVGVAI 63
Query: 68 DAPAKDGEANAALLEYMSSLIHVSVGEFV 96
AP +GEANA L Y+S ++ + + V
Sbjct: 64 AAPPSEGEANAELCRYLSKVLDLRKSDVV 92
>sp|Q8WUR7|CO040_HUMAN UPF0235 protein C15orf40 OS=Homo sapiens GN=C15orf40 PE=1 SV=1
Length = 126
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 12 KSAGST---QSKIKTNDENLPSC--IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQ 66
K AG+T +S+ K + LP + + P V+I IHAKPGSK ++TD++ EAV V
Sbjct: 3 KKAGATTKGKSQSKEPERPLPPLGPVAVDPKGCVTIAIHAKPGSKQNAVTDLTAEAVNVA 62
Query: 67 IDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
I AP +GEANA L Y+S ++ + + V
Sbjct: 63 IAAPPSEGEANAELCRYLSKVLELRKSDVV 92
>sp|Q505I4|CO040_RAT UPF0235 protein C15orf40 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 126
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
V+I IHAKPGSK ++TD++ EAVGV I AP +GEANA L Y+S ++ + + V
Sbjct: 36 VTIAIHAKPGSKQNAVTDLNTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVV 92
>sp|A1KB74|Y3464_AZOSB UPF0235 protein azo3464 OS=Azoarcus sp. (strain BH72) GN=azo3464
PE=3 SV=1
Length = 98
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 32 IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+R S+++T+H +PG++ + EA+ +++ AP DG+ANAAL +++ V
Sbjct: 5 VREAADGSLTLTLHIQPGARQTGFAGLHGEAMKIRLAAPPVDGKANAALCAFLADFCEV 63
>sp|C1D6C4|Y3181_LARHH UPF0235 protein LHK_03181 OS=Laribacter hongkongensis (strain
HLHK9) GN=LHK_03181 PE=3 SV=1
Length = 97
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
V +T+H +PG++ + + +A+ +++ AP DG+ANA LL +++ + VS
Sbjct: 11 VRLTLHVQPGARRTEVAGLHGDALKIRLAAPPVDGKANACLLAFLARGLGVS 62
>sp|B8F6W0|Y1504_HAEPS UPF0235 protein HAPS_1504 OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=HAPS_1504 PE=3 SV=1
Length = 97
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV------ 90
P + + I +P + I + D + + I AP DG+ANA LL+Y+S L V
Sbjct: 10 PQGIRLRIFLQPKASRDQIVGLHDNELKIAITAPPIDGQANAHLLKYLSKLFKVPKSSIV 69
Query: 91 -SVGEFVESVQVF 102
GE Q+F
Sbjct: 70 LEKGELQRHKQIF 82
>sp|Q7VN15|Y778_HAEDU UPF0235 protein HD_0778 OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=HD_0778 PE=3 SV=1
Length = 97
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
P + + I +P + I + D + V I AP DG ANA LL+Y+S L V
Sbjct: 10 PYGIRLRIFLQPKASRDQIVGLHDNELKVAITAPPVDGAANAYLLKYLSKLFKV 63
>sp|O28207|Y2072_ARCFU UPF0235 protein AF_2072 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2072 PE=3 SV=1
Length = 78
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 40 VSITIHAKPGSKSCSIT-DVSDEAVGVQIDAPAKDGEANAALL 81
V I++H PGSK S + D AV V+I +PAK+G+AN LL
Sbjct: 8 VLISVHVSPGSKEVSFSYDEWRRAVEVRIKSPAKEGKANRELL 50
>sp|B0TGP1|Y2027_HELMI UPF0235 protein Helmi_20270 OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=Helmi_20270 PE=3 SV=1
Length = 96
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 36 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
P S+ I +P + + + D+A+ V++ AP DGEANAA L++++ + +S
Sbjct: 8 PGGSIRFRIRVQPRASKNEVCGLLDDALKVRLTAPPVDGEANAACLQFIAKTLGLS 63
>sp|Q478W6|Y3887_DECAR UPF0235 protein Daro_3887 OS=Dechloromonas aromatica (strain RCB)
GN=Daro_3887 PE=3 SV=1
Length = 97
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSV 92
+++T+H +PG+K + +A+ +++ AP DG+AN AL+ +++ S +H+
Sbjct: 13 ITLTLHIQPGAKKSEFAGLHGDALKIRLAAPPVDGKANEALIRFIADALGLAKSAVHLKS 72
Query: 93 GE 94
G+
Sbjct: 73 GQ 74
>sp|B0BQW9|Y1398_ACTPJ UPF0235 protein APJL_1398 OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=APJL_1398 PE=3 SV=1
Length = 98
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 33 RLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
R+ P + + I +P + I + D + + I AP DG ANA LL+Y+S L V
Sbjct: 6 RIENPYGIRLRIFLQPKASRDQIVGLHDSELKIAITAPPVDGAANAHLLKYLSKLFKV 63
>sp|B3GYF9|Y1431_ACTP7 UPF0235 protein APP7_1431 OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=APP7_1431 PE=3 SV=1
Length = 97
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 33 RLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV-- 90
R+ P + + I +P + I + D + + I AP DG ANA LL+Y+S L V
Sbjct: 6 RIENPYGIRLRIFLQPKASRDQIVGLHDSELKIAITAPPVDGAANAHLLKYLSKLFKVPK 65
Query: 91 -----SVGEFVESVQVF 102
GE Q+F
Sbjct: 66 SSIVLEKGELQRHKQLF 82
>sp|Q5P6I2|Y954_AROAE UPF0235 protein AZOSEA09540 OS=Aromatoleum aromaticum (strain
EbN1) GN=AZOSEA09540 PE=3 SV=1
Length = 97
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 31 CIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+R S+ +++H +PG+K EA+ +++ AP DG+ANAAL ++++ V
Sbjct: 3 WLREAADGSLVLSLHVQPGAKKTEFVGPHGEAMKLRLAAPPVDGKANAALTVFLAAFCGV 62
>sp|A6VQS7|Y1977_ACTSZ UPF0235 protein Asuc_1977 OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=Asuc_1977 PE=3 SV=1
Length = 98
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSV 92
+ + I +P + +I + DE + + I AP DG ANA L++Y+S S + +
Sbjct: 11 IRLRIMLQPKASKDAIIGLHDEELKISITAPPVDGAANAHLIKYLSKAFKVPKSAVQLEK 70
Query: 93 GEFVESVQVFF 103
GE QVF
Sbjct: 71 GELNRHKQVFI 81
>sp|Q54UW1|U235_DICDI UPF0235 protein OS=Dictyostelium discoideum GN=DDB_G0280783 PE=3
SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+ I ++ P SK SI D+ + ++I P DG+AN ++E++S +++
Sbjct: 32 IKINVNVHPNSKESSIVSFEDQILSLRISEPPIDGKANIGVIEFLSKELNI 82
>sp|B4U5M3|Y1378_HYDS0 UPF0235 protein HY04AAS1_1378 OS=Hydrogenobaculum sp. (strain
Y04AAS1) GN=HY04AAS1_1378 PE=3 SV=1
Length = 73
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
+ + KP +K+ S+ + D+++ + I +P +G+AN L++ +S + VS
Sbjct: 3 LRVKVKPNAKTVSVEQLEDKSLKISIKSPPVNGKANEELIKVLSEFLKVS 52
>sp|A8FSL7|Y1229_SHESH UPF0235 protein Ssed_1229 OS=Shewanella sediminis (strain
HAW-EB3) GN=Ssed_1229 PE=3 SV=1
Length = 95
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + I V E + + I AP DG+ANA L++Y+S V G+ V
Sbjct: 13 LNLYIQPKASRDQIVGVHGEELKIAITAPPVDGKANAHLIKYLSKAFKVPKGDIV 67
>sp|Q65VT1|Y322_MANSM UPF0235 protein MS0322 OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=MS0322 PE=3 SV=1
Length = 95
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSV 92
+ + I +P + I + D+ + + I AP DG ANA LL+Y+S S I +
Sbjct: 11 LRLRIFLQPKASRDKIIGIHDDELKIAITAPPVDGAANAHLLKYLSKAFKVPKSAIILEK 70
Query: 93 GEFVESVQVFF 103
GE Q+F
Sbjct: 71 GELNRHKQLFI 81
>sp|A3N228|Y1380_ACTP2 UPF0235 protein APL_1380 OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=APL_1380 PE=3 SV=1
Length = 97
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 33 RLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV-- 90
R+ P + + I +P + I + D + + I A DG ANA LL+Y+S L V
Sbjct: 6 RIENPCGIRLRIFLQPKASRDQIVGLHDNELKIAITALPVDGAANAHLLKYLSKLFKVPK 65
Query: 91 -----SVGEFVESVQVF 102
GE Q+F
Sbjct: 66 SSIVLEKGELQRHKQLF 82
>sp|B0UWD6|Y1819_HAES2 UPF0235 protein HSM_1819 OS=Haemophilus somnus (strain 2336)
GN=HSM_1819 PE=3 SV=1
Length = 99
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
++ + I +P + + + D A+ + I AP DG+ANA LL+++S V+ + +
Sbjct: 10 NLRLRIFLQPKASKDHLIGLYDNALKISITAPPIDGQANAHLLKFLSKTFKVAKSQII 67
>sp|Q0I525|Y1657_HAES1 UPF0235 protein HS_1657 OS=Haemophilus somnus (strain 129Pt)
GN=HS_1657 PE=3 SV=1
Length = 99
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
++ + I +P + + + D A+ + I AP DG+ANA LL+++S V+ + +
Sbjct: 10 NLRLRIFLQPKASKDHLIGLYDNALKISITAPPIDGQANAHLLKFLSKTFKVAKSQII 67
>sp|B1KIX3|Y1329_SHEWM UPF0235 protein Swoo_1329 OS=Shewanella woodyi (strain ATCC 51908
/ MS32) GN=Swoo_1329 PE=3 SV=1
Length = 95
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEF 95
+ ++ +P + I V E + + I AP DG+ANA L++Y+S V G+
Sbjct: 13 LNLYIQPKASRDQIVGVHGEELKIAITAPPVDGKANAHLIKYLSKAFKVPKGDI 66
>sp|C3LRX5|Y443_VIBCM UPF0235 protein VCM66_0443 OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=VCM66_0443 PE=3 SV=1
Length = 96
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + E + V I AP DG+ANA L +Y++ L V+ G V
Sbjct: 13 LRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVV 67
>sp|Q9KUQ7|Y458_VIBCH UPF0235 protein VC_0458 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=VC_0458 PE=3 SV=1
Length = 96
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + E + V I AP DG+ANA L +Y++ L V+ G V
Sbjct: 13 LRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVV 67
>sp|A5F9H9|Y1210_VIBC3 UPF0235 protein VC0395_A0010/VC395_0502 OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=VC0395_A0010 PE=3 SV=1
Length = 96
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + E + V I AP DG+ANA L +Y++ L V+ G V
Sbjct: 13 LRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVV 67
>sp|Q9CLC6|Y1313_PASMU UPF0235 protein PM1313 OS=Pasteurella multocida (strain Pm70)
GN=PM1313 PE=3 SV=1
Length = 99
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS 85
+ + I +P + I + D + + I AP DG+ANA LL+++S
Sbjct: 14 LRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLS 59
>sp|Q052F7|Y1291_LEPBL UPF0235 protein LBL_1291 OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=LBL_1291 PE=3 SV=1
Length = 73
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+ T+ KP SK D +V + + PA +G+AN A++E +S + +
Sbjct: 1 MKFTVRVKPNSKKIFFRKEEDGSVTIAVREPALEGKANEAVIETISREMKI 51
>sp|Q04TD1|Y1240_LEPBJ UPF0235 protein LBJ_1240 OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=LBJ_1240 PE=3 SV=1
Length = 73
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+ T+ KP SK D +V + + PA +G+AN A++E +S + +
Sbjct: 1 MKFTVRVKPNSKKIFFRKEEDGSVTIAVREPALEGKANEAVIETISREMKI 51
>sp|A7MZ92|Y3581_VIBHB UPF0235 protein VIBHAR_03581 OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=VIBHAR_03581 PE=3 SV=1
Length = 96
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSS-------LIHV 90
V + ++ +P + I + E + + I AP DG+ANA L ++++ L+H+
Sbjct: 10 EDVVLRLYIQPKASRDKIVGLHGEELKIAITAPPVDGKANAHLTKFLAKQFKVAKGLVHI 69
Query: 91 SVGEFVESVQV 101
GE Q+
Sbjct: 70 EKGELGRHKQI 80
>sp|Q72QP5|Y2068_LEPIC UPF0235 protein LIC_12068 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=LIC_12068 PE=3 SV=1
Length = 73
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+ T++ KP SK D + + + PA +G+AN A++E +S + V
Sbjct: 1 MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKV 51
>sp|Q8F5E6|Y1736_LEPIN UPF0235 protein LA_1736 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601)
GN=LA_1736 PE=3 SV=1
Length = 73
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
+ T++ KP SK D + + + PA +G+AN A++E +S + V
Sbjct: 1 MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKV 51
>sp|A0LDU6|Y3654_MAGSM UPF0235 protein Mmc1_3654 OS=Magnetococcus sp. (strain MC-1)
GN=Mmc1_3654 PE=3 SV=1
Length = 98
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGE 94
++ +TI +P + + E + V ++AP DG AN AL +++ + ++ G+
Sbjct: 10 TLHLTIRVQPKAAQERVMGWQGEQLKVALNAPPVDGAANKALCHFLAKQLGIAKGQ 65
>sp|A4WE91|Y3359_ENT38 UPF0235 protein Ent638_3359 OS=Enterobacter sp. (strain 638)
GN=Ent638_3359 PE=3 SV=1
Length = 96
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSVGE 94
+ ++ +P + SI + + + V I AP DG+ANA L +Y++ S + + GE
Sbjct: 13 LRLYIQPKASRDSIVGLHGDELKVAITAPPVDGQANAHLTKYLAKQFRVAKSQVIIEKGE 72
Query: 95 FVESVQVFFLN 105
QV LN
Sbjct: 73 LGRHKQVKILN 83
>sp|Q87LJ3|Y2619_VIBPA UPF0235 protein VP2619 OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=VP2619 PE=3 SV=1
Length = 96
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSS-------LIHV 90
+ + ++ +P + I + E + + I AP DG+ANA L ++++ L+H+
Sbjct: 10 EDIVLKLYIQPKASRDKIVGLHGEELKIAITAPPVDGKANAHLTKFLAKQFKIAKGLVHI 69
Query: 91 SVGEFVESVQV 101
GE Q+
Sbjct: 70 EKGELGRHKQI 80
>sp|Q8TIP5|Y4097_METAC UPF0235 protein MA_4097 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_4097
PE=3 SV=2
Length = 109
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEA---VGVQIDAPAKDGEANAALLEYMSSLIHVSVGE 94
S + I I PGS+S S+ +E + V++ A+ G+AN L+E ++ L +S E
Sbjct: 16 SGIIIEIEVTPGSRSLSVPSGYNEWRKRIAVKLTKNAQKGKANEQLIESLAELFGISSSE 75
Query: 95 FV 96
+
Sbjct: 76 IL 77
>sp|Q0AE64|Y2146_NITEC UPF0235 protein Neut_2146 OS=Nitrosomonas eutropha (strain C91)
GN=Neut_2146 PE=3 SV=1
Length = 99
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSV 92
++ + ++ +PG++ V E + +++ AP DG+AN AL +++ +V +
Sbjct: 10 HNLILKLYIQPGARQTEAIGVHGEELKIKLAAPPMDGKANRALAVFLAKRFNVPL 64
>sp|A7MP89|Y387_CROS8 UPF0235 protein ESA_00387 OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=ESA_00387 PE=3 SV=1
Length = 96
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + + + V I AP DG+ANA L++Y++ V+ + V
Sbjct: 13 LRLYIQPKASRDSIIGLHGDELKVAITAPPVDGQANAHLVKYLAKQFRVAKSQVV 67
>sp|B3EMY7|Y2066_CHLPB UPF0235 protein Cphamn1_2066 OS=Chlorobium phaeobacteroides
(strain BS1) GN=Cphamn1_2066 PE=3 SV=1
Length = 101
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
SV +I A+P S IT D ++ V + AP DGEAN ++ + V+
Sbjct: 10 SVFFSIKAQPRSSKSMITGEYDGSIKVNLKAPPVDGEANLECCRLLARTLGVA 62
>sp|A8GJ38|Y4033_SERP5 UPF0235 protein Spro_4033 OS=Serratia proteamaculans (strain 568)
GN=Spro_4033 PE=3 SV=1
Length = 96
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVG 93
++I ++ +P + I + + + V I AP DG+ANA L+++++ V+ G
Sbjct: 11 LAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFKVAKG 64
>sp|Q82X93|Y395_NITEU UPF0235 protein NE0395 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=NE0395 PE=3 SV=1
Length = 100
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHV 90
S + + ++ +PG++ + E + +++ A DG+AN AL E+++ +V
Sbjct: 11 SLLILKLYVQPGARQTEAVGICGEELKIKLAALPVDGKANRALTEFLAKRFNV 63
>sp|C4LCM6|Y962_TOLAT UPF0235 protein Tola_0962 OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=Tola_0962 PE=3 SV=1
Length = 96
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
V + ++ +P + I E + + I AP DG+ANA L+++++ V+ + V
Sbjct: 10 EVWLDVYIQPKASRDQIQGWHGEELKIAITAPPVDGQANAHLIKFLAKQFKVAKSQIV 67
>sp|Q977V2|SRP54_HALVD Signal recognition particle 54 kDa protein OS=Haloferax volcanii
(strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 /
NCIMB 2012 / VKM B-1768 / DS2) GN=srp54 PE=1 SV=1
Length = 465
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 60 DEAVGV------QIDAPAKDGEANAALLEYMSSLIHVSVGEFVESVQVFFLNGF 107
DE++G+ ++D AK G A A+ E SS+ + +GE V+ ++ F NGF
Sbjct: 231 DESIGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGF 284
>sp|B5XU96|Y722_KLEP3 UPF0235 protein KPK_0722 OS=Klebsiella pneumoniae (strain 342)
GN=KPK_0722 PE=3 SV=1
Length = 96
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
+ ++ +P + SI V + + V I AP DG+ANA L+++++ V+
Sbjct: 13 LRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFRVA 62
>sp|A6TDW3|Y3323_KLEP7 UPF0235 protein KPN78578_33230 OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578)
GN=KPN78578_33230 PE=3 SV=1
Length = 96
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVS 91
+ ++ +P + SI V + + V I AP DG+ANA L+++++ V+
Sbjct: 13 LRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFRVA 62
>sp|A9KXP6|Y3186_SHEB9 UPF0235 protein Sbal195_3186 OS=Shewanella baltica (strain OS195)
GN=Sbal195_3186 PE=3 SV=1
Length = 99
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSVGE 94
+ ++ +P + I + + + V I AP DG+ANA L +Y++ S IH+ GE
Sbjct: 13 LNLYIQPKASRDQIVGLHGDELKVAITAPPIDGKANAHLSKYLAKTFKVPKSDIHIMKGE 72
Query: 95 FVESVQVFFLN 105
Q+ ++
Sbjct: 73 LGRHKQIRVID 83
>sp|A6WQT5|Y3043_SHEB8 UPF0235 protein Shew185_3043 OS=Shewanella baltica (strain OS185)
GN=Shew185_3043 PE=3 SV=1
Length = 99
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSVGE 94
+ ++ +P + I + + + V I AP DG+ANA L +Y++ S IH+ GE
Sbjct: 13 LNLYIQPKASRDQIVGLHGDELKVAITAPPIDGKANAHLSKYLAKTFKVPKSDIHIMKGE 72
Query: 95 FVESVQVFFLN 105
Q+ ++
Sbjct: 73 LGRHKQIRVID 83
>sp|A3D6Z7|Y3028_SHEB5 UPF0235 protein Sbal_3028 OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=Sbal_3028 PE=3 SV=1
Length = 99
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMS-------SLIHVSVGE 94
+ ++ +P + I + + + V I AP DG+ANA L +Y++ S IH+ GE
Sbjct: 13 LNLYIQPKASRDQIVGLHGDELKVAITAPPIDGKANAHLSKYLAKTFKVPKSDIHIMKGE 72
Query: 95 FVESVQVFFLN 105
Q+ ++
Sbjct: 73 LGRHKQIRVID 83
>sp|B4THI7|YGGU_SALHS UPF0235 protein YggU OS=Salmonella heidelberg (strain SL476)
GN=yggU PE=3 SV=1
Length = 96
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + + V V I AP DG+AN+ L++++ V+ + V
Sbjct: 13 LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRVAKSQIV 67
>sp|B5F5M7|YGGU_SALA4 UPF0235 protein YggU OS=Salmonella agona (strain SL483) GN=yggU
PE=3 SV=1
Length = 96
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSLIHVSVGEFV 96
+ ++ +P + SI + + V V I AP DG+AN+ L++++ V+ + V
Sbjct: 13 LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRVAKSQIV 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,388,183
Number of Sequences: 539616
Number of extensions: 1284176
Number of successful extensions: 2803
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2686
Number of HSP's gapped (non-prelim): 133
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)