BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033908
MRIYDSLVTFREDKTYLRKFKPLQVVFPQWLQDVGFYNIRPELQSADPWKVRIVKDVPQQ
EPGSGDCGVFMLMFTMYLMFGLKLDFDSSHGHYFRKKIAVDIFPGDIAL

High Scoring Gene Products

Symbol, full name Information P value
CG11023 protein from Drosophila melanogaster 2.4e-07
ESD4
EARLY IN SHORT DAYS 4
protein from Arabidopsis thaliana 4.8e-06
F1NYU6
Uncharacterized protein
protein from Gallus gallus 6.2e-05
E1BYD7
Uncharacterized protein
protein from Gallus gallus 0.00018
si:rp71-56k2.4 gene_product from Danio rerio 0.00042
CG32110 protein from Drosophila melanogaster 0.00068
ULP1A
UB-like protease 1A
protein from Arabidopsis thaliana 0.00071

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033908
        (109 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0031208 - symbol:CG11023 species:7227 "Drosophila ...   127  2.4e-07   1
TAIR|locus:2130864 - symbol:ESD4 "EARLY IN SHORT DAYS 4" ...   115  4.8e-06   1
UNIPROTKB|F1NYU6 - symbol:F1NYU6 "Uncharacterized protein...   100  6.2e-05   1
UNIPROTKB|E1BYD7 - symbol:E1BYD7 "Uncharacterized protein...   100  0.00018   1
ZFIN|ZDB-GENE-060810-183 - symbol:si:rp71-56k2.4 "si:rp71...    98  0.00042   1
FB|FBgn0052110 - symbol:CG32110 species:7227 "Drosophila ...    94  0.00068   1
TAIR|locus:2077632 - symbol:ULP1A "UB-like protease 1A" s...    95  0.00071   1


>FB|FBgn0031208 [details] [associations]
            symbol:CG11023 species:7227 "Drosophila melanogaster"
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0016926 "protein
            desumoylation" evidence=ISS] [GO:0016929 "SUMO-specific protease
            activity" evidence=ISS] InterPro:IPR003653 Pfam:PF02902
            PROSITE:PS50600 EMBL:AE014134 GO:GO:0006508 GO:GO:0016929
            GO:GO:0016926 GeneTree:ENSGT00530000062941 UniGene:Dm.11978
            GeneID:33155 KEGG:dme:Dmel_CG11023 FlyBase:FBgn0031208
            GenomeRNAi:33155 NextBio:782163 MEROPS:C48.A08 RefSeq:NP_787955.2
            ProteinModelPortal:Q86BM6 SMR:Q86BM6 IntAct:Q86BM6
            MINT:MINT-1028249 STRING:Q86BM6 EnsemblMetazoa:FBtr0300690
            UCSC:CG11023-RA InParanoid:Q86BM6 PhylomeDB:Q86BM6
            ArrayExpress:Q86BM6 Bgee:Q86BM6 Uniprot:Q86BM6
        Length = 480

 Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 25/87 (28%), Positives = 51/87 (58%)

Query:    21 KPLQVVFPQWLQDVGFYNIRPELQSADPWKVRIVKDVPQQEPGSGDCGVFMLMFTMYLMF 80
             +P+     ++L++   +  + +  ++D + +  V+++P+Q  GS DCG+F  MF  Y+  
Sbjct:   396 RPVLDALEKYLREESIFKPKKQFDTSD-FVIESVQNIPRQLDGS-DCGIFSCMFAEYITC 453

Query:    81 GLKLDFDSSHGHYFRKKIAVDIFPGDI 107
              + + F  S   YFRKK+A++I  G++
Sbjct:   454 DVPITFTQSEMLYFRKKMALEIVDGEL 480


>TAIR|locus:2130864 [details] [associations]
            symbol:ESD4 "EARLY IN SHORT DAYS 4" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0009909
            "regulation of flower development" evidence=RCA;IMP] [GO:0009911
            "positive regulation of flower development" evidence=IMP]
            [GO:0016929 "SUMO-specific protease activity" evidence=IDA]
            [GO:0016926 "protein desumoylation" evidence=IDA] [GO:0006406 "mRNA
            export from nucleus" evidence=RCA] [GO:0010074 "maintenance of
            meristem identity" evidence=RCA] [GO:0010413 "glucuronoxylan
            metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
            process" evidence=RCA] InterPro:IPR003653 Pfam:PF02902
            PROSITE:PS50600 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0031965 GO:GO:0006508 GO:GO:0009911
            EMBL:Z97339 EMBL:AL161542 EMBL:AJ582719 EMBL:AF386934 EMBL:AY081548
            EMBL:AK316760 EMBL:Y11155 EMBL:Y11187 IPI:IPI00534517 PIR:E71424
            PIR:H85175 RefSeq:NP_567478.1 UniGene:At.4378 HSSP:Q02724
            ProteinModelPortal:Q94F30 SMR:Q94F30 IntAct:Q94F30 STRING:Q94F30
            MEROPS:C48.022 PaxDb:Q94F30 PRIDE:Q94F30 EnsemblPlants:AT4G15880.1
            GeneID:827269 KEGG:ath:AT4G15880 TAIR:At4g15880 eggNOG:COG5160
            HOGENOM:HOG000237848 InParanoid:Q94F30 KO:K08592 OMA:INVYLEL
            PhylomeDB:Q94F30 ProtClustDB:PLN03189 Genevestigator:Q94F30
            GO:GO:0016929 GO:GO:0016926 Uniprot:Q94F30
        Length = 489

 Score = 115 (45.5 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 24/57 (42%), Positives = 34/57 (59%)

Query:    46 ADPWKVRIVKDVPQQEPGSGDCGVFMLMFTMYLMFGLKLDFDSSHGHYFRKKIAVDI 102
             A+ W +  V+D+PQQ+ G  DCG+FML +  +   GL L F   H  YFR + A +I
Sbjct:   428 ANSWDMEFVEDLPQQKNGY-DCGMFMLKYIDFFSRGLGLCFSQEHMPYFRLRTAKEI 483


>UNIPROTKB|F1NYU6 [details] [associations]
            symbol:F1NYU6 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] InterPro:IPR003653
            Pfam:PF02902 PROSITE:PS50600 GO:GO:0008234 GO:GO:0006508
            GeneTree:ENSGT00530000062941 EMBL:AADN02024284 IPI:IPI00598041
            Ensembl:ENSGALT00000010496 OMA:VHFFSTF ArrayExpress:F1NYU6
            Uniprot:F1NYU6
        Length = 247

 Score = 100 (40.3 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query:    29 QWLQDVGFYNIRPELQSADPWKVRIVK--DVPQQEPGSGDCGVFMLMFTMYLMFGLKLDF 86
             Q+LQ+  +     +L S++ W +  ++  ++PQQ  GS DCGVFM  +  Y+     + F
Sbjct:   168 QYLQEESWEKQNVKLSSSE-WTLHSMESHEIPQQSNGS-DCGVFMCKYADYVSRDKPITF 225

Query:    87 DSSHGHYFRKKIAVDI 102
               ++  YFRK++  +I
Sbjct:   226 TENNMPYFRKRMVWEI 241


>UNIPROTKB|E1BYD7 [details] [associations]
            symbol:E1BYD7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0005643
            "nuclear pore" evidence=IEA] [GO:0016929 "SUMO-specific protease
            activity" evidence=IEA] InterPro:IPR003653 Pfam:PF02902
            PROSITE:PS50600 GO:GO:0006508 GO:GO:0005643 GO:GO:0016929
            GeneTree:ENSGT00530000062941 EMBL:AADN02024284 IPI:IPI00821811
            Ensembl:ENSGALT00000041158 ArrayExpress:E1BYD7 Uniprot:E1BYD7
        Length = 454

 Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query:    29 QWLQDVGFYNIRPELQSADPWKVRIVK--DVPQQEPGSGDCGVFMLMFTMYLMFGLKLDF 86
             Q+LQ+  +     +L S++ W +  ++  ++PQQ  GS DCGVFM  +  Y+     + F
Sbjct:   375 QYLQEESWEKQNVKLSSSE-WTLHSMESHEIPQQSNGS-DCGVFMCKYADYVSRDKPITF 432

Query:    87 DSSHGHYFRKKIAVDI 102
               ++  YFRK++  +I
Sbjct:   433 TENNMPYFRKRMVWEI 448


>ZFIN|ZDB-GENE-060810-183 [details] [associations]
            symbol:si:rp71-56k2.4 "si:rp71-56k2.4" species:7955
            "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR003653 Pfam:PF02902
            PROSITE:PS50600 ZFIN:ZDB-GENE-060810-183 GO:GO:0008234
            GO:GO:0006508 GeneTree:ENSGT00530000062941 KO:K03345 EMBL:BX640508
            IPI:IPI00902337 RefSeq:XP_684283.2 UniGene:Dr.77467
            Ensembl:ENSDART00000114260 GeneID:556400 KEGG:dre:556400
            NextBio:20881467 Bgee:E7F9K9 Uniprot:E7F9K9
        Length = 598

 Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query:    49 WKVRIVK--DVPQQEPGSGDCGVFMLMFTMYLMFGLKLDFDSSHGHYFRKKIAVDI 102
             W V  ++  ++PQQ+ GS DCGVF+  +  Y+  G  L F  +H  YFRK +  +I
Sbjct:   537 WIVSSLRPSEIPQQKNGS-DCGVFICKYADYISRGRNLTFRQNHMPYFRKAMIWEI 591


>FB|FBgn0052110 [details] [associations]
            symbol:CG32110 species:7227 "Drosophila melanogaster"
            [GO:0008233 "peptidase activity" evidence=ISS] [GO:0006508
            "proteolysis" evidence=ISS] [GO:0016926 "protein desumoylation"
            evidence=ISS] [GO:0016929 "SUMO-specific protease activity"
            evidence=ISS] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:AE014296 GO:GO:0006508 HSSP:Q02724 KO:K08592 GO:GO:0016929
            GO:GO:0016926 GeneTree:ENSGT00530000062941 RefSeq:NP_729837.1
            UniGene:Dm.33699 ProteinModelPortal:Q8IQH8 SMR:Q8IQH8 PRIDE:Q8IQH8
            EnsemblMetazoa:FBtr0075931 GeneID:317858 KEGG:dme:Dmel_CG32110
            UCSC:CG32110-RA FlyBase:FBgn0052110 InParanoid:Q8IQH8
            PhylomeDB:Q8IQH8 GenomeRNAi:317858 NextBio:843981
            ArrayExpress:Q8IQH8 Bgee:Q8IQH8 Uniprot:Q8IQH8
        Length = 411

 Score = 94 (38.1 bits), Expect = 0.00068, P = 0.00068
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query:    49 WKVRIVKDVPQQEPGSGDCGVFMLMFTMYLMFGLKLDFDSSHGHYFRKKIAVDIFPGD 106
             +++   ++VPQQ+    DCGVF+ MF  YL     + F      YFR K+ +++  GD
Sbjct:   352 FRIEDAQNVPQQD-NMNDCGVFVCMFAEYLTRDAPITFSKKDMKYFRTKMVLEL-TGD 407


>TAIR|locus:2077632 [details] [associations]
            symbol:ULP1A "UB-like protease 1A" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0016926
            "protein desumoylation" evidence=IDA] [GO:0016929 "SUMO-specific
            protease activity" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0016571 "histone
            methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] InterPro:IPR003653 Pfam:PF02902
            PROSITE:PS50600 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006508 EMBL:AC016827 HSSP:Q02724
            eggNOG:COG5160 HOGENOM:HOG000237848 KO:K08592 GO:GO:0016929
            GO:GO:0016926 EMBL:AK117529 IPI:IPI00548268 RefSeq:NP_187347.2
            UniGene:At.18746 ProteinModelPortal:Q8GYL3 SMR:Q8GYL3
            MEROPS:C48.A02 PRIDE:Q8GYL3 EnsemblPlants:AT3G06910.1 GeneID:819876
            KEGG:ath:AT3G06910 TAIR:At3g06910 InParanoid:Q8GYL3 OMA:NIHWTLA
            Genevestigator:Q8GYL3 Uniprot:Q8GYL3
        Length = 502

 Score = 95 (38.5 bits), Expect = 0.00071, P = 0.00071
 Identities = 29/104 (27%), Positives = 49/104 (47%)

Query:     6 SLVTFREDK-TYLRKFKPLQVVFPQWLQDVGFY---NIRPELQ---SADPWKVRIVKDVP 58
             +++  ++ K  YL  FK  +   P+ L  +  Y    +R + +       W+   V+D+P
Sbjct:   397 AVINIKDQKFQYLDSFKGRE---PKILDALARYFVDEVRDKSEVDLDVSRWRQEFVQDLP 453

Query:    59 QQEPGSGDCGVFMLMFTMYLMFGLKLDFDSSHGHYFRKKIAVDI 102
              Q  G  DCG+FM+ +  +   GL L F      YFR + A +I
Sbjct:   454 MQRNGF-DCGMFMVKYIDFYSRGLDLCFTQEQMPYFRARTAKEI 496


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.146   0.465    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      109       109   0.00091  102 3  11 22  0.38    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  128 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.89u 0.16s 10.05t   Elapsed:  00:00:00
  Total cpu time:  9.89u 0.16s 10.05t   Elapsed:  00:00:00
  Start:  Fri May 10 08:05:14 2013   End:  Fri May 10 08:05:14 2013

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